mRNA_H-elongata_contig12495.1882.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig12495.1882.1
Unique NamemRNA_H-elongata_contig12495.1882.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig12495.1882.1 vs. uniprot
Match: D8LI22_ECTSI (Importin subunit alpha n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI22_ECTSI)

HSP 1 Score: 252 bits (643), Expect = 2.520e-76
Identity = 137/218 (62.84%), Postives = 165/218 (75.69%), Query Frame = 1
Query:  265 QRALVKEAAWVASNVAAGRPEHRAALIQQGTPAALTALLLSDQRDLQQEAAYGIWNVVSHDGGLLAQAARNEKIMSTFAELVRTPSPPVVRCALSFMKLVCENVPGGARLVEESGGLEAIDDVHYNGQTDPDLREAAGAIVDKFFGEEGYDSSDE---EEDDN------------GHGGNGAWSHH-SNEPGGQH------LPSLGRGAHLTRPAWMN 852
            +R LVKEAAWVASNVAAGR EHR AL+ QG+PAALT LLLSDQ DLQQEAA+GIWN+V+HD  LL QAA+++++M  +  LVR  SPPVVRCALSF++LVC+NVPGG R+VE +GGLEAIDDVHY+GQ DP+L+EAAGAIVD+FFG++GY+SSDE   EE D               GG+G  S + +  P GQ       L  LGRGAHLTRP+WMN
Sbjct:  358 RRVLVKEAAWVASNVAAGRREHREALVAQGSPAALTLLLLSDQLDLQQEAAHGIWNIVAHDSELLLQAAKDDRVMGAYVALVRAQSPPVVRCALSFLQLVCQNVPGGPRMVESAGGLEAIDDVHYSGQADPELQEAAGAIVDRFFGDDGYESSDEGGDEETDTETVVGGGDGFGFNFGGSGDTSQNGARGPPGQXXXXXQPLAPLGRGAHLTRPSWMN 575          
BLAST of mRNA_H-elongata_contig12495.1882.1 vs. uniprot
Match: A0A7S2XV23_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XV23_9STRA)

HSP 1 Score: 109 bits (272), Expect = 1.160e-25
Identity = 70/177 (39.55%), Postives = 100/177 (56.50%), Query Frame = 1
Query:  331 RAALIQQGTPAALTALLLSDQRDLQQEAAYGIWNVVSHDGGLLAQAARNEKIMSTFAELVRTPSPPVVRCALSFMKLVCENVPGGARLVEESGGLEAIDDVHYNGQTDPDLREAAGAIVDKFFGEEGYDSSDEEEDDNGHGGNGAWSHHSNEPGGQHLPS----LGRGAHLTRPAWM 849
            R AL+Q G    L  LL SDQ D Q+EAA+G++N+   DG  L +  +++ ++  +  L+R P   VVRCALSF+ +V  + P G  +VE +GG+E IDD+HY+  TD ++   AG +VD+FFGE+ +   D           G           Q  P+    LGRG HLT+PAWM
Sbjct:   11 RRALVQAGVGPCLLHLLHSDQFDFQKEAAFGLYNLCC-DGVHLEEVMKSD-VLQIYLRLLRVPDNSVVRCALSFLTVVLTHYPQGPHVVERAGGIEVIDDIHYH-HTDVEIAAYAGHLVDEFFGEDYHGDLD-----------GPSPPFEPRQPQQEPPAFSLGLGRGKHLTQPAWM 173          
BLAST of mRNA_H-elongata_contig12495.1882.1 vs. uniprot
Match: A0A7S2BA76_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BA76_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 1.610e-20
Identity = 75/197 (38.07%), Postives = 112/197 (56.85%), Query Frame = 1
Query:  268 RALVKEAAWVASNVAAGRPEHRAALIQQGTPAALTALLLSDQRDLQQEAAYGIWNVVSHDGGLLAQAARNEKIMSTFAELVRTPSPPVVRCALSFMKLVCENVPGGA-RLVEESGGLEAIDDVHYNGQTDPDLREAAGAIVDKFFGEEGYDSSDEEEDDNGHGGNGAWSHHSNEPGGQHLPS--LGRGAHLTRPAWM 849
            R L+KEA W  SN+AAG P H   ++    P  LT LL + + D+Q+EA + + N++S D   +A A  N  +    A L+RT    V+ C+L+ + ++ +  P  A  +VE++GGLEAIDD+HY G    D+RE A ++VD ++G+E Y+ +   +D    G  G     S+  G Q  P   LGRG  + RPAWM
Sbjct:  118 RGLLKEAVWTMSNMAAG-PVHHRTMMANFLPDLLT-LLNTGKFDVQREALFAVRNLMS-DPACVAFALGNGVLPPCIA-LLRTHDHDVILCSLTVIGVILKTSPSTAPTIVEDAGGLEAIDDLHY-GDVSDDVRELAASLVDTYYGDE-YEPTQSGDD----GRQGQLMQFSDVRGPQAQPQGGLGRGRDINRPAWM 304          
BLAST of mRNA_H-elongata_contig12495.1882.1 vs. uniprot
Match: A0A7S4L2U6_GUITH (Importin subunit alpha n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4L2U6_GUITH)

HSP 1 Score: 91.7 bits (226), Expect = 3.250e-17
Identity = 50/147 (34.01%), Postives = 90/147 (61.22%), Query Frame = 1
Query:  268 RALVKEAAWVASNVAAGRPEHRAALIQQGTPAALTALLLSDQRDLQQEAAYGIWNVVSHDGGLLAQAARNEKIMSTFAELVRTPSPPVVRCALSFMKLVCENVPGGARLVEESGGLEAIDDVHYNGQTDPDLREAAGAIVDKFFGEE 708
            + L+KEA WV SN+AAG+  HRAA++++G  A+L  +L +   D+++EAA+ +++++ HD          E + + F  L+R P P VV  AL+  + +   + GG RL EE+ G++A++ + Y   +   +  ++  +VDK+FGE+
Sbjct:  339 KGLMKEATWVLSNIAAGKANHRAAMMEEGVHASLIVILKTSHFDIRKEAAFALFHLL-HDPAYTPTLFTPE-LATEFVGLLRAPDPQVVDMALTVAERILATMEGGPRLFEEADGIDALEQLIYANSSQAVVARSS-FLVDKYFGED 482          
BLAST of mRNA_H-elongata_contig12495.1882.1 vs. uniprot
Match: A0A7S0HZ05_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HZ05_9CRYP)

HSP 1 Score: 90.9 bits (224), Expect = 5.210e-17
Identity = 47/124 (37.90%), Postives = 80/124 (64.52%), Query Frame = 1
Query:  268 RALVKEAAWVASNVAAGRPEHRAALIQQGTPAALTALLLSDQRDLQQEAAYGIWNVVSHDGGLLAQAARNEKIMSTFAELVRTPSPPVVRCALSFMKLVCENVPGGARLVEESGGLEAIDDVHY 639
            +AL+KEA+WV SNVAAG+P HRAA++++G    L  +L +   D+++EAA+ +++++ HD     Q   N ++ + F  L+R P P VV  AL+  + +   + GG RL EE+ G++A++ + Y
Sbjct:  321 KALMKEASWVLSNVAAGKPTHRAAMMEEGMQKTLFHILQTSHFDIRKEAAFALFHLL-HDPAY-TQTLFNRELATEFVGLLRAPDPQVVDMALTVAERILATMEGGPRLFEEADGIDALEQLIY 442          
BLAST of mRNA_H-elongata_contig12495.1882.1 vs. uniprot
Match: L1IB06_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IB06_GUITC)

HSP 1 Score: 87.0 bits (214), Expect = 4.560e-16
Identity = 53/161 (32.92%), Postives = 90/161 (55.90%), Query Frame = 1
Query:  268 RALVKEAAWVASNVAAGRPEHRAALIQQGTPAALTALLLSDQRDLQQEAAYGIWNVVSHDGGLLAQAARNEKIMSTFAELVRTPSPPVVRCALSFMKLVCENVPGGARLVEESGGLEAIDDVHYNGQT-----------DPDLREAAGA---IVDKFFGEE 708
            + L+KEA WV SN+AAG+  HRAA++++G  A+L  +L +   D+++EAA+ +++++ HD          E + + F  L+R P P VV  AL+  + +   + GG RL EE+ G++A++ + Y   +           +   RE   A    VDK+FGE+
Sbjct:  165 KGLMKEATWVLSNIAAGKANHRAAMMEEGVHASLIVILKTSHFDIRKEAAFALFHLL-HDPAYTPTLFTPE-LATEFVGLLRAPDPQVVDMALTVAERILATMEGGPRLFEEADGIDALEQLIYANSSQAVVARSSFLGESPRREGGDADVCAVDKYFGED 323          
BLAST of mRNA_H-elongata_contig12495.1882.1 vs. uniprot
Match: A0A7S0DM12_9EUKA (Importin subunit alpha n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DM12_9EUKA)

HSP 1 Score: 79.7 bits (195), Expect = 4.030e-13
Identity = 51/158 (32.28%), Postives = 82/158 (51.90%), Query Frame = 1
Query:  268 RALVKEAAWVASNVAAGRPEHRAALIQQGTPAALTALLLSDQRDLQQEAAYGIWNVVSHDGGLLAQAARNEKIMSTFAELVRTPSPPVVRCALSFMKLVCENVPGGARLVEESGGLEAIDDVHYNGQTDPD--LREAAGAIVDKFFGEEGYDSSDEEE 735
            R L KEA WV  N+ AG  EH   +I+ G    L  +    Q DL++EA + + NV  +D  L  +    + ++     L++      +   + F++++        RLVEE+GG++A++ V    QT PD  L + AG IVDK++GE+     DE+E
Sbjct:  338 RGLKKEAIWVVGNILAGPKEHVEVVIKSGFLPVLLEIFQKGQFDLKREAIHALLNVAKYDEPL--EFMVKQGVIPPVLSLMKVDERDTIAACIQFIEIILARNKDAVRLVEEAGGIDALETV----QTHPDGSLWDRAGGIVDKYWGEDADYDDDEKE 489          
BLAST of mRNA_H-elongata_contig12495.1882.1 vs. uniprot
Match: A0A8H4AKR9_GIGMA (ARM repeat-containing protein n=1 Tax=Gigaspora margarita TaxID=4874 RepID=A0A8H4AKR9_GIGMA)

HSP 1 Score: 77.4 bits (189), Expect = 1.720e-12
Identity = 44/153 (28.76%), Postives = 86/153 (56.21%), Query Frame = 1
Query:  268 RALVKEAAWVASNVAAGR-PEHRAALIQQGTPAALTALLLSDQRDLQQEAAYGIWNVVSHDGGLLAQAARNEKIMSTFAELVRTPSPPVVRCALSFMKLVCENVPGGARLVEESGGLEAIDDVHYNGQTDPDLREAAGAIVDKFFGEEGYDSS 723
            R + KE+ WV SN+ A R PE    +   G    L+++      D+++EAAY + N+ SH G    +   ++ ++  F   +R+    ++R  L +++L+   V  G +L+E+  G++A++ V    Q DP LR+ +  ++DK+FGE+ ++++
Sbjct:  228 RPVKKESLWVMSNITASRRPEVLIKVFNAGFIPILSSIATHTNFDIRKEAAYSLLNIASH-GEEYMKPLPHQDLLPGFLVFIRSQDIDLIRLGLGYVELLLTQVQNGQQLLEQMQGIDALESV--TSQEDPSLRDTSTRLMDKYFGEDFFNTN 377          
BLAST of mRNA_H-elongata_contig12495.1882.1 vs. uniprot
Match: A0A024TZR0_9STRA (Importin subunit alpha n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TZR0_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 2.440e-12
Identity = 63/206 (30.58%), Postives = 98/206 (47.57%), Query Frame = 1
Query:  229 LHFLRNLLPLKPQRALVKEAAWVASNVAAGRPEHRAALIQQGTPAALTALLLSDQRDLQQEAAYGIWNVVSHDGGLLAQAARNEKIMSTFAELVRTPSPPVVRCALSFMKLVCENVPGGARLVEESGGLEAIDDVHYNGQTDPDLREAAGAIVDKFFGEEGYDSSDEEEDDNGHGGNGAWSHHSNEPGGQHLPSLGRGAHLTRPAW 846
            L+ L+ LL L+    +V EAAWV SN+AA        L++      L A       D+++EAA+ + N+         Q    + ++  +  L+  P   VV  AL F++ V  +VP G   VE +GG+ A++ +     T   L   A  +V++F+GE    S D      GH     ++   + P  Q    +GRGAH+TRPAW
Sbjct:  314 LYMLKRLLWLENDSHVVAEAAWVVSNLAARDAAVVELLVKHDFLPRLGACFRDGGYDIRKEAAFALTNIAITSTTYAEQIVALD-VIDGYVTLLSVPDLNVVGTALQFIEHVLRHVPRGVYTVESAGGIAALETIQDG--TSDFLATKAEQLVNEFYGE----SYDAPFSPPGHAPEATFNQPQSSP--QSTAGMGRGAHMTRPAW 510          
BLAST of mRNA_H-elongata_contig12495.1882.1 vs. uniprot
Match: A0A6G0XIU1_9STRA (Importin subunit alpha n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XIU1_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 3.560e-11
Identity = 64/215 (29.77%), Postives = 101/215 (46.98%), Query Frame = 1
Query:  211 IPSPSHLHFLRNLLPLKPQRALVKEAAWVASNVAAGRPEHRAALIQQGTPAALTALLLSDQRDLQQEAAYGIWNVVSHDGGLLAQAARNEKIMSTFAELVRTPSPPVVRCALSFMKLVCENVPGGARLVEESGGLEAIDDVHYNGQTDPDLREAAGAIVDKFFGEEGYDSSDEEEDDNGHGGNGAWSHHSNEPGGQHLP---SLGRGAHLTRPAW 846
            +  P  L+ ++ LL        V E+AWV SN+AA        L+Q      LT +      ++++E A+ + N+       + +    E ++  F  L+      VV  AL F++ V   VP G  LVE  GG++A++ V  +GQ+D  L   A  ++++F+GE  YDS     +          + H   P  Q  P    +GRGAH+TRPAW
Sbjct:  308 VAEPRFLYMIKRLLSADGDPHAVAESAWVVSNLAARDVAVVDLLLQYEFLPRLTQVFRDGSYEIRKETAFALTNIAV-TASYVTKVVEFE-VLDGFVSLLTVADTTVVANALQFIEQVLRQVPRGVYLVECHGGIDALESVQ-DGQSDQ-LSTKAEQLMNEFYGET-YDSPMSPPNS---------ADHKTPPAFQAGPPVGGMGRGAHMTRPAW 508          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12495.1882.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
D8LI22_ECTSI2.520e-7662.84Importin subunit alpha n=2 Tax=Ectocarpus TaxID=28... [more]
A0A7S2XV23_9STRA1.160e-2539.55Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2BA76_9STRA1.610e-2038.07Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S4L2U6_GUITH3.250e-1734.01Importin subunit alpha n=1 Tax=Guillardia theta Ta... [more]
A0A7S0HZ05_9CRYP5.210e-1737.90Hypothetical protein (Fragment) n=1 Tax=Hanusia ph... [more]
L1IB06_GUITC4.560e-1632.92Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
A0A7S0DM12_9EUKA4.030e-1332.28Importin subunit alpha n=1 Tax=Amorphochlora amoeb... [more]
A0A8H4AKR9_GIGMA1.720e-1228.76ARM repeat-containing protein n=1 Tax=Gigaspora ma... [more]
A0A024TZR0_9STRA2.440e-1230.58Importin subunit alpha n=1 Tax=Aphanomyces invadan... [more]
A0A6G0XIU1_9STRA3.560e-1129.77Importin subunit alpha n=1 Tax=Aphanomyces euteich... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig12495contigH-elongata_contig12495:24..1581 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score254.6
Seed ortholog evalue5.5e-65
Seed eggNOG ortholog2880.D8LI22
EggNOG free text desc.nuclear import signal receptor activity
EggNOG OGsCOG5064@1,KOG0166@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons3
Model size860
Cds size858
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig12495.1882.1prot_H-elongata_contig12495.1882.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig12495 24..1581 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929738.1865797-CDS-H-elongata_contig12495:23..5591622929738.1865797-CDS-H-elongata_contig12495:23..559Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12495 24..559 +
1691679138.7346637-CDS-H-elongata_contig12495:23..5591691679138.7346637-CDS-H-elongata_contig12495:23..559Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12495 24..559 +
1622929738.2002594-CDS-H-elongata_contig12495:868..9801622929738.2002594-CDS-H-elongata_contig12495:868..980Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12495 869..980 +
1691679138.753037-CDS-H-elongata_contig12495:868..9801691679138.753037-CDS-H-elongata_contig12495:868..980Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12495 869..980 +
1622929738.2142277-CDS-H-elongata_contig12495:1371..15811622929738.2142277-CDS-H-elongata_contig12495:1371..1581Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12495 1372..1581 +
1691679138.770109-CDS-H-elongata_contig12495:1371..15811691679138.770109-CDS-H-elongata_contig12495:1371..1581Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12495 1372..1581 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig12495.1882.1

>prot_H-elongata_contig12495.1882.1 ID=prot_H-elongata_contig12495.1882.1|Name=mRNA_H-elongata_contig12495.1882.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=286bp
LALLILECEIAPGAMFGMRGVLVFASTAKRESGVSHSDAIMNTFWFCFYS
FFCCWTLDDVFFCFVSFLDSIPSPSHLHFLRNLLPLKPQRALVKEAAWVA
SNVAAGRPEHRAALIQQGTPAALTALLLSDQRDLQQEAAYGIWNVVSHDG
GLLAQAARNEKIMSTFAELVRTPSPPVVRCALSFMKLVCENVPGGARLVE
ESGGLEAIDDVHYNGQTDPDLREAAGAIVDKFFGEEGYDSSDEEEDDNGH
GGNGAWSHHSNEPGGQHLPSLGRGAHLTRPAWMNP*
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mRNA from alignment at H-elongata_contig12495:24..1581+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig12495.1882.1 ID=mRNA_H-elongata_contig12495.1882.1|Name=mRNA_H-elongata_contig12495.1882.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1558bp|location=Sequence derived from alignment at H-elongata_contig12495:24..1581+ (Himanthalia elongata Himel1 dioecious)
CTAGCGCTTTTAATTCTTGAATGCGAGATCGCCCCCGGTGCGATGTTTGG AATGCGAGGTGTTTTGGTTTTCGCCTCTACAGCGAAAAGGGAGAGTGGGG TTTCTCACTCAGACGCCATCATGAACACCTTTTGGTTTTGTTTTTATTCA TTTTTTTGTTGTTGGACCCTCGATGACGTCTTCTTTTGTTTCGTTTCGTT TCTCGATTCCATCCCCTCTCCTTCACATCTCCATTTCCTCCGGAACTTAT TACCGCTAAAGCCTCAACGCGCCCTTGTCAAGGAGGCGGCGTGGGTAGCG TCCAACGTTGCGGCGGGGCGGCCGGAGCATCGGGCGGCGCTTATCCAACA AGGCACACCGGCCGCGCTCACCGCGCTCCTGCTCTCGGACCAGCGGGACC TCCAACAGGAAGCGGCGTACGGAATCTGGAACGTGGTCTCCCACGACGGA GGCCTCCTGGCACAGGCGGCGAGGAACGAGAAGATCATGTCCACGTTTGC GGAGCTGGTGCGCACCCCGTCGCCGCCCGTCGTGAGGTACGAAACCCCGG GGATGGGGGACGGGTCAAAGACGGTGTGTGGGTATGTGTTTGTGTGTGAA AGAGAAAGCGCTCATTAACCAAATGGAATGATTTTCATGTAGAGTATAGG AGGTTAAGTTGTCAAGAATTCGGGGATCGTAGGATTTTCGCCCCTTAGAT GTGCTACATCATACTCCTCAGAATATACTGAAAATGAGGTACTACGATGT TTGTGGTTTGTCTACTTGGAAGAGAGGAGGGTTAGTGGTGCGCCTTGTCT TGATTTTTCATTTTTGATTCACGCAAAAATTACCCGGCCCGCTAGGTGTG CGCTATCGTTCATGAAGCTGGTGTGCGAAAACGTTCCCGGGGGCGCAAGG TTGGTTGAGGAATCCGGGGGGCTGGAGGCCATTGACGATGTTCATTACAA CGGACAGGTGAGCGTTGAGTGCCCAGATAGCGCATCGCGAATGATGGCTC CTGCGAGGGCTGGGCTGCTGCTTTCTCGATTGTGTTTGTGCGTAATAGAC TGAAAAAAGTGCGGCGCAATAGTGCAGCACTATCACAAAGAAGCACTCGT TTAATCCGCGAGGCTAGGGAAGCGCGTGATGGTCGATTGGTCCATCTGAT GAACTAGATCGGTACAAGCGCTATTTAGAGTCACTCTGTGGCAATTTTTG TTCCCTCCCCCTTATCTCTCAACAGCGTAGCGCGTGTGCTACACACGTGA CTCATTTTGTGTGTGTGGAACCTTATGAATTGCACATTACCACATTATCT GTAGATCTGCCATGATTTGCGCGCTTGTGTGTTGTGCATGTTGCTTAGAC GGACCCAGACCTCCGAGAAGCCGCCGGAGCGATAGTGGACAAGTTCTTCG GGGAGGAAGGATATGACTCGTCGGACGAGGAAGAAGACGACAACGGTCAC GGCGGCAACGGAGCCTGGTCTCATCATTCCAACGAGCCCGGTGGGCAACA TCTTCCGTCGTTGGGAAGAGGGGCGCATCTGACGCGACCTGCGTGGATGA ATCCATGA
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Coding sequence (CDS) from alignment at H-elongata_contig12495:24..1581+

>mRNA_H-elongata_contig12495.1882.1 ID=mRNA_H-elongata_contig12495.1882.1|Name=mRNA_H-elongata_contig12495.1882.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1716bp|location=Sequence derived from alignment at H-elongata_contig12495:24..1581+ (Himanthalia elongata Himel1 dioecious)
CTAGCGCTTTTAATTCTTGAATGCGAGATCGCCCCCGGTGCGATGTTTGG
AATGCGAGGTGTTTTGGTTTTCGCCTCTACAGCGAAAAGGGAGAGTGGGG
TTTCTCACTCAGACGCCATCATGAACACCTTTTGGTTTTGTTTTTATTCA
TTTTTTTGTTGTTGGACCCTCGATGACGTCTTCTTTTGTTTCGTTTCGTT
TCTCGATTCCATCCCCTCTCCTTCACATCTCCATTTCCTCCGGAACTTAT
TACCGCTAAAGCCTCAACGCGCCCTTGTCAAGGAGGCGGCGTGGGTAGCG
TCCAACGTTGCGGCGGGGCGGCCGGAGCATCGGGCGGCGCTTATCCAACA
AGGCACACCGGCCGCGCTCACCGCGCTCCTGCTCTCGGACCAGCGGGACC
TCCAACAGGAAGCGGCGTACGGAATCTGGAACGTGGTCTCCCACGACGGA
GGCCTCCTGGCACAGGCGGCGAGGAACGAGAAGATCATGTCCACGTTTGC
GGAGCTGGTGCGCACCCCGTCGCCGCCCGTCGTGAGCTAGCGCTTTTAAT
TCTTGAATGCGAGATCGCCCCCGGTGCGATGTTTGGAATGCGAGGTGTTT
TGGTTTTCGCCTCTACAGCGAAAAGGGAGAGTGGGGTTTCTCACTCAGAC
GCCATCATGAACACCTTTTGGTTTTGTTTTTATTCATTTTTTTGTTGTTG
GACCCTCGATGACGTCTTCTTTTGTTTCGTTTCGTTTCTCGATTCCATCC
CCTCTCCTTCACATCTCCATTTCCTCCGGAACTTATTACCGCTAAAGCCT
CAACGCGCCCTTGTCAAGGAGGCGGCGTGGGTAGCGTCCAACGTTGCGGC
GGGGCGGCCGGAGCATCGGGCGGCGCTTATCCAACAAGGCACACCGGCCG
CGCTCACCGCGCTCCTGCTCTCGGACCAGCGGGACCTCCAACAGGAAGCG
GCGTACGGAATCTGGAACGTGGTCTCCCACGACGGAGGCCTCCTGGCACA
GGCGGCGAGGAACGAGAAGATCATGTCCACGTTTGCGGAGCTGGTGCGCA
CCCCGTCGCCGCCCGTCGTGAGGTGTGCGCTATCGTTCATGAAGCTGGTG
TGCGAAAACGTTCCCGGGGGCGCAAGGTTGGTTGAGGAATCCGGGGGGCT
GGAGGCCATTGACGATGTTCATTACAACGGACAGGTGTGCGCTATCGTTC
ATGAAGCTGGTGTGCGAAAACGTTCCCGGGGGCGCAAGGTTGGTTGAGGA
ATCCGGGGGGCTGGAGGCCATTGACGATGTTCATTACAACGGACAGACGG
ACCCAGACCTCCGAGAAGCCGCCGGAGCGATAGTGGACAAGTTCTTCGGG
GAGGAAGGATATGACTCGTCGGACGAGGAAGAAGACGACAACGGTCACGG
CGGCAACGGAGCCTGGTCTCATCATTCCAACGAGCCCGGTGGGCAACATC
TTCCGTCGTTGGGAAGAGGGGCGCATCTGACGCGACCTGCGTGGATGAAT
CCATGAACGGACCCAGACCTCCGAGAAGCCGCCGGAGCGATAGTGGACAA
GTTCTTCGGGGAGGAAGGATATGACTCGTCGGACGAGGAAGAAGACGACA
ACGGTCACGGCGGCAACGGAGCCTGGTCTCATCATTCCAACGAGCCCGGT
GGGCAACATCTTCCGTCGTTGGGAAGAGGGGCGCATCTGACGCGACCTGC
GTGGATGAATCCATGA
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