mRNA_H-elongata_contig123888.1797.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig123888.1797.1
Unique NamemRNA_H-elongata_contig123888.1797.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig123888.1797.1 vs. uniprot
Match: D8LN13_ECTSI (Regulator of chromosome condensation-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN13_ECTSI)

HSP 1 Score: 230 bits (587), Expect = 2.230e-67
Identity = 146/343 (42.57%), Postives = 191/343 (55.69%), Query Frame = 1
Query:   10 LVGCGDSSFCQLPCMCPSSSWRRK--------RPEGSDVVNAL--KISQVSCGTSVAVALVSP--------AVASRQSYGVVEWGTSMYGEKTSSAAKAGHENSGTKPCGRQNGLPPPLRHPVEIA-SML------SGPGVRSISCGAHFVVASVQTGGCITWGGGRD-HRALGRGGCGSCTSPTCINTGEPSTPP-SPPEFGNAAWVAQPLGSGGLEVISLAAGDDHTVVACADGNAWAWGRGDCGQLGCDTLPASEKIALSHGSCTPMMVQFPTAAA---------AACYKNSRQAGDNVSSPVSVHAV-----ACGRDHSAVLTKDGRLWTFGSGLYGQV 915
            LVG GDSSFCQ+PC  P +SW R+         P  ++ V  +  KISQ++CG +  +A V+         A+   +   ++EWGT +YGE+ S+      +       G +      L HP ++A S L      S P +R I+CGAHFVVAS++ GGCI+WGGGR+  RALGRG CG+C    C N   P+ PP S P      WVA+PLG GG +V  LAAGDDH +    DG+AWAWGRGDCGQLG  + P          +C PM VQ P+ A+         A+    +  A   V S   VH       ACGRDHSA++T DGR+WTFGSGL+GQ+
Sbjct:    8 LVGVGDSSFCQIPC--PWASWSRQTADANSKSHPSRNEDVRRVQTKISQIACGATTCLAAVNXXXXXXXXSAIDHARPSFLLEWGTGLYGERLSTETSVPQQ-------GDERNHASFLNHPAQVALSSLPLGLRSSPPVIRYIACGAHFVVASLENGGCISWGGGREGRRALGRGSCGTCGQ--CRNGSTPAAPPLSYPSSSKPDWVAEPLGLGGSKVADLAAGDDHVIAVGTDGSAWAWGRGDCGQLGYGSPPDGADCDGGGSACVPMAVQLPSPASGTPLDEGGLASTSSGAAGAATGVKSGHGVHGALVIRAACGRDHSAIITNDGRIWTFGSGLHGQL 339          
BLAST of mRNA_H-elongata_contig123888.1797.1 vs. uniprot
Match: A0A6H5KPF1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPF1_9PHAE)

HSP 1 Score: 210 bits (535), Expect = 1.060e-59
Identity = 145/359 (40.39%), Postives = 186/359 (51.81%), Query Frame = 1
Query:   10 LVGCGDSSFCQLPCMCPSSSWRRK------RPEGS----DVVNA-LKISQVSCGTSVAVALVSP-------------AVASRQSYGVVEWGTSMYGEKTSSAAKAGHENSGTKPCGRQNGLPPPLRHPVEIA-SML------SGPGVRSISCGAHFVVASVQTGGCITWGGGRD-HRALGRGGCGSCTSPTCINTGEPSTPP-SPPEFGNAAWVAQPLGSGGLEVISLAAGDDHTVVACADGNAWAWGRGDCGQLGCDTLPASEKIALSHGSCTPMMVQFPT-------------------AAAAACYKNSRQAGDNVSSP-----VSVHAVACGRDHSAVLTKDGRLWTFGSGLYGQV 915
            LVG GDSSFCQ+PC  P +SW R+      +  GS    DV     KISQ++CG +  +A V+              A+       ++EWGT +YGE+ S+      +       G +      L HP  +A S L      S P +R I+CGAHFVVAS++ GGCI+WGGGR+  RALGRG CG+C    C +   P+  P S P   N  WVA+PLG GG +V  LAAGDDH +    DG AWAWGRGDCGQLG  + P          +C PM VQ P+                   A A        ++G  +  P       V   ACGRDHSA++T DGR+WTFGSGL+GQ+
Sbjct:    8 LVGVGDSSFCQIPC--PWASWSRQTADEKGKSHGSSSNDDVCRVQTKISQIACGATTCLAAVNXXXXXXXXXXXXXXAIDPAPPAYLLEWGTGLYGERLSTETSVPQQ-------GDERNQESFLNHPAPVAFSSLPLGLRSSPPAIRYIACGAHFVVASLENGGCISWGGGREGRRALGRGSCGTCGQ--CHDGSTPAARPLSYPSSSNPDWVAEPLGLGGSKVADLAAGDDHVIAVGTDGCAWAWGRGDCGQLGYGS-PDGVDYDGGGSACVPMAVQLPSPASGTPLDEGGLASTSSGAAGAXXXXXXXVKSGHGLQDPRKRPGALVIRAACGRDHSAIITNDGRIWTFGSGLHGQL 354          
BLAST of mRNA_H-elongata_contig123888.1797.1 vs. uniprot
Match: UPI0018AFE07C (cell wall anchor protein n=1 Tax=Hymenobacter jeongseonensis TaxID=2791027 RepID=UPI0018AFE07C)

HSP 1 Score: 69.7 bits (169), Expect = 1.110e-9
Identity = 57/199 (28.64%), Postives = 81/199 (40.70%), Query Frame = 1
Query:  319 PVEIASMLSGPGVRSISCGAHFVVASVQTGGCITWGGGRDHRALGRGGCGSCTSPTCINTGEPSTPPSPPEFGNAAWVAQPLGSGGLEVISLAAGDDHTVVACADGNAWAWGRGDCGQLGCDTLPASEKIALSHGSCTPMMVQFPTAAAAACYKNSRQAGDNVSSPVSVHAVACGRDHSAVLTKDGRLWTFGSGLYGQV 915
            PV++     G G   ++ G    +A    G    WGG RD + LG G   + T+P  +   E +          A W              +AAG  H++    DG  +AWG  D GQLG  +         S  S TP+ V  PT+AA   +                  +A G DH+  LT DGRL+ +G+  YGQ+
Sbjct:   68 PVQVRPPAPGTGWSQVAMGTSHTLALTTDGRIQAWGGNRDGQ-LGDGTASAHTTPVAVALPEAAA--------QAQWK------------QIAAGTSHSLALTTDGQLYAWGNNDEGQLGNGS---------SLDSPTPVAVSLPTSAANTTWAQ----------------IAAGNDHTLALTTDGRLFAWGNNQYGQL 220          
BLAST of mRNA_H-elongata_contig123888.1797.1 vs. uniprot
Match: A0A8J9ZP77_BRALA (RCCD1 protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8J9ZP77_BRALA)

HSP 1 Score: 69.3 bits (168), Expect = 1.170e-9
Identity = 57/204 (27.94%), Postives = 88/204 (43.14%), Query Frame = 1
Query:  346 GPGVRSISCGAHFVVASVQTGGCITWGGGRDHRALGRGGCGSCTSPTCINTGEPSTPPSPPEFGNAAWVAQPLGSGGLEVISLAAGDDHTVVACADGNAWAWGRGDCGQLGCDTLPASEKIALSHGSCTPMMVQFPTAAAAACYKNSRQAGDNVSSPV--------------SVHAVACGRDHSAVLTKDGRLWTFGSGLYGQV 915
            G  V+++ CG    +A   +G   +WG G     LG G   +C +P  I   E                       G+ ++++AAG  H+V   A G+ + WG  + GQLG   LP S+        CT    + P+ +  A      Q GDNV+  +               +  ++CG  H+A LTK+G+L T+G G YGQ+
Sbjct:  162 GENVKAVCCGKEHSLALTVSGRVFSWGNG-SRGQLGHGTTEACNTPQVIEALE-----------------------GVTMVTIAAGGWHSVSVSACGDLYVWGWNEAGQLG---LPTSKHKTGPSDGCTTCTDKEPSVSDMA------QQGDNVAEVLVQATPTIVDLPTGQELSKISCGSRHTAALTKEGQLLTWGWGAYGQL 332          
BLAST of mRNA_H-elongata_contig123888.1797.1 vs. uniprot
Match: A0A3Q1EBR4_9TELE (Probable E3 ubiquitin-protein ligase HERC4 n=1 Tax=Acanthochromis polyacanthus TaxID=80966 RepID=A0A3Q1EBR4_9TELE)

HSP 1 Score: 69.7 bits (169), Expect = 1.590e-9
Identity = 63/206 (30.58%), Postives = 87/206 (42.23%), Query Frame = 1
Query:  304 PPLRHPVEIASMLSGPGVRSISCGAHFVVASVQTGGCITWG-GGRDHRALGRGGCGSCTSPTCINTGEPSTPPSPPEFGNAAWVAQPLGSGGLEVISLAAGDDHTVVACADGNAWAWGRGDCGQLGC-DTLPASEKIALSHGSCTPMMVQFPTAAAAACYKNSRQAGDNVSSPVSVHAVACGRDHSAVLTKDGRLWTFGSGLYGQV 915
            PP   P+E  S +    V  +SCG    V   + G   TWG   R    LG+   GS         G P              + Q L    + ++ + AG + + V    G  ++WGR DCGQLG  DT   S          TP  VQ        C    +          +VH V+CG+DH+A+LTK G ++TFGSG +GQ+
Sbjct:  110 PPTARPLEAFSNIQ---VSQVSCGIKHSVVLTRDGRVFTWGQNSRGQLGLGKKSSGS---------GSPQ-------------LVQTLSE--IPLVQVCAGGEQSFVLSVSGGLFSWGRNDCGQLGLGDTTDRS----------TPTSVQ--------CLNMKK----------TVH-VSCGKDHTAILTKHGSVFTFGSGRFGQL 259          
BLAST of mRNA_H-elongata_contig123888.1797.1 vs. uniprot
Match: UPI0009B4C859 (probable E3 ubiquitin-protein ligase HERC3 n=1 Tax=Monopterus albus TaxID=43700 RepID=UPI0009B4C859)

HSP 1 Score: 68.6 bits (166), Expect = 3.820e-9
Identity = 59/204 (28.92%), Postives = 87/204 (42.65%), Query Frame = 1
Query:  307 PLRHPVEIASMLSGPGVRSISCGAHFVVASVQTGGCITWG-GGRDHRALGRGGCGSCTSPTCINTGEPSTPPSPPEFGNAAWVAQPLGSGGLEVISLAAGDDHTVVACADGNAWAWGRGDCGQLGCDTLPASEKIALSHGSCTPMMVQFPTAAAAACYKNSRQAGDNVSSPVSVHAVACGRDHSAVLTKDGRLWTFGSGLYGQV 915
            P   P+E+   +    V  ++CG+   VA  + G   TWG   R    LG   C S +SP  +            +F +A           + ++ +AAG + +      G  + WGR DCGQLG         +        P  V F                  +S   ++H V+CG+DHSA+LTKDG ++TFGSG YGQ+
Sbjct:  108 PTPRPLEVFCKIP---VSQVACGSQHSVALTKNGQVYTWGLDSRGQLGLGNRRC-STSSPRHL------------QFLSA-----------IPLVQIAAGGEQSFALSVSGGVFGWGRNDCGQLG---------LGDETDRHIPTPVHF------------------LSMKKTIH-VSCGKDHSAILTKDGVVFTFGSGQYGQL 256          
BLAST of mRNA_H-elongata_contig123888.1797.1 vs. uniprot
Match: A0A521Q7E9_9PROT (Fibronectin type-III domain-containing protein n=1 Tax=Gallionellaceae bacterium TaxID=2052162 RepID=A0A521Q7E9_9PROT)

HSP 1 Score: 67.0 bits (162), Expect = 1.140e-8
Identity = 63/202 (31.19%), Postives = 86/202 (42.57%), Query Frame = 1
Query:  340 LSGPGVRSISCGAHFVVASVQTGGCITWGGGRDHRALGRGGCGSCTSPTCINTGEPSTPPSPPEFGNAAWVAQ--PLGSGGL--EVISLAAGDDHTVVACADGNAWAWGRGDCGQLGCDTLPASEKIALSHGSCTPMMVQFPTAAAA-ACYKNSRQAGDNVSSPV-----SVHAVACGRDHSAVLTKDGRLWTFGSGLYGQV 915
            L+ P + +I+ G    VA    G    WG    +  LG  G  S     C N          P +G   W     P    G+   V ++A G  HT+   +DG  WAWGR D GQLG  TL A+      + S T M+     A A    +  + QA +   +PV     S+ AV+ G  HS  L  DG +W +G   YGQ+
Sbjct:  443 LAPPAMTAIAAGFQHTVALKDDGTVWAWG----YNVLGTLGYASMD---CAN----------PVYGQFFWTCSDVPTQLTGITGSVAAIAGGYSHTLAVTSDGQVWAWGRNDTGQLG--TLAAN-----CNRSITQMLPSILQAQALDTVFDPATQACNTTPTPVNAIPGSIVAVSAGMRHSLALMSDGTVWAWGGNYYGQL 620          
BLAST of mRNA_H-elongata_contig123888.1797.1 vs. uniprot
Match: UPI0011EA47F1 (probable E3 ubiquitin-protein ligase HERC4 isoform X1 n=3 Tax=Archocentrus centrarchus TaxID=63155 RepID=UPI0011EA47F1)

HSP 1 Score: 66.6 bits (161), Expect = 1.650e-8
Identity = 54/190 (28.42%), Postives = 77/190 (40.53%), Query Frame = 1
Query:  355 VRSISCGAHFVVASVQTGGCITWGGG-RDHRALG--RGGCGSCTSPTCINTGEPSTPPSPPEFGNAAWVAQPLGSGGLEVISLAAGDDHTVVACADGNAWAWGRGDCGQLGCDTLPASEKIALSHGSCTPMMVQFPTAAAAACYKNSRQAGDNVSSPVSVHAVACGRDHSAVLTKDGRLWTFGSGLYGQV 915
            V  I+CG+   VA  + G   TWG   R    LG  + GC S      ++T                          + VI +AAG D +      G  ++WGR DCGQLG   +             TP+ V         C    +            H ++CG+DH+A+LTK G ++TFGSG +GQ+
Sbjct:  126 VSQIACGSQHSVALTKGGQLYTWGQDCRGQLGLGTRKSGCRSPQHVRSLST--------------------------IPVIQVAAGGDQSFALSVSGGVFSWGRNDCGQLGLGDIKDRH---------TPVSVH--------CLNRKK-----------AHHISCGQDHTAILTKHGAVFTFGSGQHGQL 261          
BLAST of mRNA_H-elongata_contig123888.1797.1 vs. uniprot
Match: A0A3P9J792_ORYLA (Uncharacterized protein n=1 Tax=Oryzias latipes TaxID=8090 RepID=A0A3P9J792_ORYLA)

HSP 1 Score: 66.2 bits (160), Expect = 1.930e-8
Identity = 40/114 (35.09%), Postives = 57/114 (50.00%), Query Frame = 1
Query:  574 GLEVISLAAGDDHTVVACADGNAWAWGRGDCGQLGCDTLPASEKIALSHGSCTPMMVQFPTAAAAACYKNSRQAGDNVSSPVSVHAVACGRDHSAVLTKDGRLWTFGSGLYGQV 915
            G+ ++ ++AG +H+      G+ + WGR DCGQLG       E   L H                  Y N ++         +V A ACG+DH+AVLT DG ++TFGSG YGQ+
Sbjct:  175 GMPLVQVSAGGEHSFALSVSGSVFGWGRNDCGQLGLGDTTDRETPTLVH------------------YLNMKK---------TVFA-ACGKDHTAVLTMDGTVFTFGSGHYGQL 260          
BLAST of mRNA_H-elongata_contig123888.1797.1 vs. uniprot
Match: A0A668S2H1_OREAU (Uncharacterized protein n=1 Tax=Oreochromis aureus TaxID=47969 RepID=A0A668S2H1_OREAU)

HSP 1 Score: 64.7 bits (156), Expect = 1.940e-8
Identity = 38/113 (33.63%), Postives = 57/113 (50.44%), Query Frame = 1
Query:  577 LEVISLAAGDDHTVVACADGNAWAWGRGDCGQLGCDTLPASEKIALSHGSCTPMMVQFPTAAAAACYKNSRQAGDNVSSPVSVHAVACGRDHSAVLTKDGRLWTFGSGLYGQV 915
            + V+ +AAG + +      G  ++WGR DCGQLG         +  +    TP +V +                 N+   VS+   +CG+DH+A LTKDG ++TFGSG YGQ+
Sbjct:  129 IPVVQVAAGGEQSFALSVSGGVFSWGRNDCGQLG---------LGDTQDRHTPTLVHYL----------------NMKKTVSI---SCGKDHTAALTKDGAVFTFGSGQYGQL 213          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig123888.1797.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LN13_ECTSI2.230e-6742.57Regulator of chromosome condensation-like protein ... [more]
A0A6H5KPF1_9PHAE1.060e-5940.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI0018AFE07C1.110e-928.64cell wall anchor protein n=1 Tax=Hymenobacter jeon... [more]
A0A8J9ZP77_BRALA1.170e-927.94RCCD1 protein n=1 Tax=Branchiostoma lanceolatum Ta... [more]
A0A3Q1EBR4_9TELE1.590e-930.58Probable E3 ubiquitin-protein ligase HERC4 n=1 Tax... [more]
UPI0009B4C8593.820e-928.92probable E3 ubiquitin-protein ligase HERC3 n=1 Tax... [more]
A0A521Q7E9_9PROT1.140e-831.19Fibronectin type-III domain-containing protein n=1... [more]
UPI0011EA47F11.650e-828.42probable E3 ubiquitin-protein ligase HERC4 isoform... [more]
A0A3P9J792_ORYLA1.930e-835.09Uncharacterized protein n=1 Tax=Oryzias latipes Ta... [more]
A0A668S2H1_OREAU1.940e-833.63Uncharacterized protein n=1 Tax=Oreochromis aureus... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig123888contigH-elongata_contig123888:907..1821 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score234.6
Seed ortholog evalue6.3e-59
Seed eggNOG ortholog2880.D8LN13
EggNOG free text desc.guanyl-nucleotide exchange factor activity
EggNOG OGsCOG5184@1,KOG1426@2759
Ec32 ortholog descriptionRegulator of chromosome condensation 1/beta-lactamase-inhibitor protein II
Ec32 orthologEc-27_000990.1
COG Functional cat.DZ
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons1
Model size915
Cds size915
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929729.457228-CDS-H-elongata_contig123888:906..18211622929729.457228-CDS-H-elongata_contig123888:906..1821Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig123888 907..1821 +
1691679135.7557228-CDS-H-elongata_contig123888:906..18211691679135.7557228-CDS-H-elongata_contig123888:906..1821Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig123888 907..1821 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig123888.1797.1prot_H-elongata_contig123888.1797.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig123888 907..1821 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig123888.1797.1

>prot_H-elongata_contig123888.1797.1 ID=prot_H-elongata_contig123888.1797.1|Name=mRNA_H-elongata_contig123888.1797.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=305bp
MARLVGCGDSSFCQLPCMCPSSSWRRKRPEGSDVVNALKISQVSCGTSVA
VALVSPAVASRQSYGVVEWGTSMYGEKTSSAAKAGHENSGTKPCGRQNGL
PPPLRHPVEIASMLSGPGVRSISCGAHFVVASVQTGGCITWGGGRDHRAL
GRGGCGSCTSPTCINTGEPSTPPSPPEFGNAAWVAQPLGSGGLEVISLAA
GDDHTVVACADGNAWAWGRGDCGQLGCDTLPASEKIALSHGSCTPMMVQF
PTAAAAACYKNSRQAGDNVSSPVSVHAVACGRDHSAVLTKDGRLWTFGSG
LYGQV
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mRNA from alignment at H-elongata_contig123888:907..1821+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig123888.1797.1 ID=mRNA_H-elongata_contig123888.1797.1|Name=mRNA_H-elongata_contig123888.1797.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=915bp|location=Sequence derived from alignment at H-elongata_contig123888:907..1821+ (Himanthalia elongata Himel1 dioecious)
ATGGCTCGACTCGTGGGCTGCGGAGATTCGAGCTTCTGCCAGCTCCCGTG CATGTGCCCATCCTCTTCATGGCGTCGTAAGCGCCCCGAGGGCAGTGATG TAGTTAATGCCCTGAAGATTTCGCAGGTATCCTGCGGTACTTCAGTAGCC GTAGCGCTAGTGTCTCCTGCCGTCGCCAGTCGCCAAAGTTACGGCGTGGT CGAATGGGGAACATCCATGTACGGCGAGAAAACATCATCGGCAGCTAAAG CGGGACACGAAAATTCGGGAACGAAGCCGTGTGGCCGTCAAAACGGACTG CCACCACCTTTACGGCACCCGGTGGAGATAGCTTCCATGCTCTCCGGGCC AGGGGTGCGATCCATCTCTTGCGGGGCGCATTTCGTCGTGGCTTCTGTGC AAACCGGCGGCTGTATCACATGGGGTGGAGGAAGAGATCACAGAGCTCTA GGTCGTGGCGGCTGCGGTAGCTGCACCTCGCCCACGTGTATAAATACTGG CGAACCTTCGACACCCCCATCTCCTCCCGAGTTTGGCAATGCGGCCTGGG TAGCGCAGCCCTTGGGTTCAGGAGGGCTAGAGGTTATCTCCTTGGCGGCG GGGGACGACCATACTGTTGTGGCCTGCGCGGACGGGAATGCTTGGGCTTG GGGCCGTGGGGATTGTGGTCAGCTCGGCTGCGACACTCTGCCAGCATCCG AAAAGATTGCCCTTTCGCACGGCAGCTGCACTCCGATGATGGTGCAATTC CCTACCGCTGCTGCTGCTGCGTGTTATAAAAACAGCAGACAGGCCGGCGA TAATGTGTCAAGTCCGGTGTCGGTTCATGCTGTTGCATGCGGGCGTGATC ACAGCGCGGTACTAACGAAAGACGGTCGTCTGTGGACGTTTGGGAGCGGG CTTTACGGGCAGGTG
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Coding sequence (CDS) from alignment at H-elongata_contig123888:907..1821+

>mRNA_H-elongata_contig123888.1797.1 ID=mRNA_H-elongata_contig123888.1797.1|Name=mRNA_H-elongata_contig123888.1797.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1830bp|location=Sequence derived from alignment at H-elongata_contig123888:907..1821+ (Himanthalia elongata Himel1 dioecious)
ATGGCTCGACTCGTGGGCTGCGGAGATTCGAGCTTCTGCCAGCTCCCGTG
CATGTGCCCATCCTCTTCATGGCGTCGTAAGCGCCCCGAGGGCAGTGATG
TAGTTAATGCCCTGAAGATTTCGCAGGTATCCTGCGGTACTTCAGTAGCC
GTAGCGCTAGTGTCTCCTGCCGTCGCCAGTCGCCAAAGTTACGGCGTGGT
CGAATGGGGAACATCCATGTACGGCGAGAAAACATCATCGGCAGCTAAAG
CGGGACACGAAAATTCGGGAACGAAGCCGTGTGGCCGTCAAAACGGACTG
CCACCACCTTTACGGCACCCGGTGGAGATAGCTTCCATGCTCTCCGGGCC
AGGGGTGCGATCCATCTCTTGCGGGGCGCATTTCGTCGTGGCTTCTGTGC
AAACCGGCGGCTGTATCACATGGGGTGGAGGAAGAGATCACAGAGCTCTA
GGTCGTGGCGGCTGCGGTAGCTGCACCTCGCCCACGTGTATAAATACTGG
CGAACCTTCGACACCCCCATCTCCTCCCGAGTTTGGCAATGCGGCCTGGG
TAGCGCAGCCCTTGGGTTCAGGAGGGCTAGAGGTTATCTCCTTGGCGGCG
GGGGACGACCATACTGTTGTGGCCTGCGCGGACGGGAATGCTTGGGCTTG
GGGCCGTGGGGATTGTGGTCAGCTCGGCTGCGACACTCTGCCAGCATCCG
AAAAGATTGCCCTTTCGCACGGCAGCTGCACTCCGATGATGGTGCAATTC
CCTACCGCTGCTGCTGCTGCGTGTTATAAAAACAGCAGACAGGCCGGCGA
TAATGTGTCAAGTCCGGTGTCGGTTCATGCTGTTGCATGCGGGCGTGATC
ACAGCGCGGTACTAACGAAAGACGGTCGTCTGTGGACGTTTGGGAGCGGG
CTTTACGGGCAGGTGATGGCTCGACTCGTGGGCTGCGGAGATTCGAGCTT
CTGCCAGCTCCCGTGCATGTGCCCATCCTCTTCATGGCGTCGTAAGCGCC
CCGAGGGCAGTGATGTAGTTAATGCCCTGAAGATTTCGCAGGTATCCTGC
GGTACTTCAGTAGCCGTAGCGCTAGTGTCTCCTGCCGTCGCCAGTCGCCA
AAGTTACGGCGTGGTCGAATGGGGAACATCCATGTACGGCGAGAAAACAT
CATCGGCAGCTAAAGCGGGACACGAAAATTCGGGAACGAAGCCGTGTGGC
CGTCAAAACGGACTGCCACCACCTTTACGGCACCCGGTGGAGATAGCTTC
CATGCTCTCCGGGCCAGGGGTGCGATCCATCTCTTGCGGGGCGCATTTCG
TCGTGGCTTCTGTGCAAACCGGCGGCTGTATCACATGGGGTGGAGGAAGA
GATCACAGAGCTCTAGGTCGTGGCGGCTGCGGTAGCTGCACCTCGCCCAC
GTGTATAAATACTGGCGAACCTTCGACACCCCCATCTCCTCCCGAGTTTG
GCAATGCGGCCTGGGTAGCGCAGCCCTTGGGTTCAGGAGGGCTAGAGGTT
ATCTCCTTGGCGGCGGGGGACGACCATACTGTTGTGGCCTGCGCGGACGG
GAATGCTTGGGCTTGGGGCCGTGGGGATTGTGGTCAGCTCGGCTGCGACA
CTCTGCCAGCATCCGAAAAGATTGCCCTTTCGCACGGCAGCTGCACTCCG
ATGATGGTGCAATTCCCTACCGCTGCTGCTGCTGCGTGTTATAAAAACAG
CAGACAGGCCGGCGATAATGTGTCAAGTCCGGTGTCGGTTCATGCTGTTG
CATGCGGGCGTGATCACAGCGCGGTACTAACGAAAGACGGTCGTCTGTGG
ACGTTTGGGAGCGGGCTTTACGGGCAGGTG
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