mRNA_H-elongata_contig1218.1667.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig1218.1667.1
Unique NamemRNA_H-elongata_contig1218.1667.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig1218.1667.1 vs. uniprot
Match: D7G0M0_ECTSI (MFS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0M0_ECTSI)

HSP 1 Score: 208 bits (529), Expect = 6.160e-57
Identity = 154/514 (29.96%), Postives = 240/514 (46.69%), Query Frame = 1
Query:    4 GFYSGWLSGAYTLGNILSSYGWGRCADRFGRKSVLIISLSSLSVFSVALGLSTSYTGAIAVMFLLGLTDCLVPIARIVVPEILGPSKAVIGMALLPGARSAGIIIGPVMGGFLAQPAIHHPSFFSSTGIFARYPFLLPNLVAGIIALLSVPLVLLGLSETLE-------RQGLTRNGSFARCHTHSSVGEEDIEN--KSINIIGSDNENGPRPLKSANPRPLDDEATGKRAAGILCMRENSVAEDPLKEQEMVSFMEGVATRNAASWKEKHD--------KPALVRHHDTPTSSSWFGANGLLASRLVQSLFCMELSLMVVRTGFFHVYPLWLLASVENGGMGWNLPKIGMVLGWTGVGGMLFQFIAYPALCRTIGIKNLLSILGPAAVFIFLVIPDIQCSSWSKQHSYPVGVTLVVLVECCTSVYVTATMLALANAVPAHLRGQLSTLLAMGGGLGRMVGPATLCALLACSLNLSSAGSGHSGVGYFVDYHLTFVIESFVMLTVVLLGFYTFT 1494
            GFY+G+++ ++T G  LS Y WG   D  GRK V+II L S+++FS+  G+S +Y+ AI   F+LGLT+ ++P  R  + E+ GP   V+GM  + G R+  ++IG  +GG LAQPA+H+P+ FS TG+FA YPFLLPNLV  ++++ ++ LV+  L ET +       R  +    +  R    +S G    +N   S + I S N      L              K   G    R       PL +      + G A+  A++ ++  D           L            FG  GLLA   V+ +  +   +  +  GF  VYPL+ L++   GG+GWN  +IG V+   G+   + Q + +P   + +GI     +     V  FL +P +    W     + + V    L+ C       A  L     VP+ +RG+L  L      LGR  GP       A S++ S+        G +VDYHL F   +  ++ V ++ + T T
Sbjct:   32 GFYAGYVASSFTFGRFLSGYVWGSATDIIGRKPVIIIGLLSITIFSMIFGMSETYSMAITTRFILGLTNGIMPALRTSLSEVCGPEHVVLGMTYISGTRAISMVIGTGIGGLLAQPALHYPTVFSPTGLFAMYPFLLPNLVGAVLSVFALFLVIFYLPETKDYNKRRFSRDSVRTASTDPRRSPSASPGRSSRKNCGSSTSAINSTNPTESPSLHLQQXXXXXXGRQKKLPYGADIDRREKGEGAPLYQHLSQEPLAGDASFPASAAEKTTDGSKSSTCATDELSAAEQGDEEQGLFGPGGLLARPHVKLVLFLGCIIATLAIGFDEVYPLYALSTPSVGGLGWNTVQIGQVMVVAGLLLAVCQLVLFPPFIKMVGITYFQRLGCGVGVAAFLAVPGLTSIGWDYDSLFSLSVVANNLIMCSLGSISLALSLGSTTLVPSRMRGKLGGLYNTAESLGRFCGPVGYATTYAWSVSPSTL----EAFGGWVDYHLVFCASALALVVVGVMAWRTLT 541          
BLAST of mRNA_H-elongata_contig1218.1667.1 vs. uniprot
Match: A0A6H5KXK7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXK7_9PHAE)

HSP 1 Score: 180 bits (457), Expect = 1.840e-48
Identity = 101/216 (46.76%), Postives = 135/216 (62.50%), Query Frame = 1
Query:  832 SSWFGANGLLASRLVQSLFCMELSLMVVRTGFFHVYPLWLLASVENGGMGWNLPKIGMVLGWTGVGGMLFQFIAYPALCRTIGIKNLLSILGPAAVFIFLVIPDIQCSSWSKQHSYPVGVTLVVLVECCTSVYVTATMLALANAVPAHLRGQLSTLLAMGGGLGRMVGPATLCALLACSLNLSSAGSGHSGVGYFVDYHLTFVIESFVMLTVVLLG 1479
            SS  G  GLL  R V+ L  M+  + ++  GF  +YPLWLLAS ++GG+ W +PKIG VLGW+GVG +LFQF  YPALC+TIGI  LL   G  A   F+ +PDIQ ++WS+  SY VGV +V+ +  C SV  TA  LA ANAVP  +RG++  + A+    GR++GPA LC LLA SL  S+           +DYH  FV+E  +M  + +LG
Sbjct:  101 SSLCGPGGLLTPRRVRLLVLMQCLVSIMDAGFVQMYPLWLLASKDSGGLEWPVPKIGKVLGWSGVGQLLFQFFVYPALCKTIGIVWLLRGSGLLAAAGFIFVPDIQRANWSENGSYVVGVAIVIFIGSCISVVETAMNLASANAVPVPMRGKMGGIFAVASSFGRVIGPAGLCTLLAWSLQSSNV---------LMDYHAVFVVEMVLMSVMFVLG 307          
BLAST of mRNA_H-elongata_contig1218.1667.1 vs. uniprot
Match: D8LJK9_ECTSI (MFS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJK9_ECTSI)

HSP 1 Score: 184 bits (467), Expect = 1.920e-48
Identity = 141/465 (30.32%), Postives = 220/465 (47.31%), Query Frame = 1
Query:    1 SGFYSGWLSGAYTLGNILSSYGWGRCADRFGRKSVLIISLSSLSVFSVALGLSTSYTGAIAVMFLLGLTDCLVPIARIVVPEILGPSKAVI-GMALLPGARSAGIIIGPVMGGFLAQPAIHHPSFFSSTGIFARYPFLLPNLVAGIIALLSVPLVLLGLSETLERQGLTRNGSFARCHTHSSVGEEDIENKSINIIGSDNENGPRPLKSANPRPLDDEATGKRA--AGILCMRENSVAEDPLKEQEMVSFMEGVATRNAASWKEKHDKPALVRHHDTPTSS----SWFGANGLLASRLVQSLFCMELSLMVVRTGFFHVYPLWLLASVENGGMGWNLPKIGMVLGWTGVGGMLFQFIAYPALCRTIGIKNLLSILGPAAVFIFLVIPDIQCSSWSKQHSYPVGVTLVVLVECCTSVYVTATMLALANAVPAHLRGQLSTLLAMGGGLGRMVGPATLCALLACSLN 1374
            +GFY+G+++GA+TLG  LS Y WG  +D  GR+ V+++ LS+ +V S+  GLST+Y  AI+  F+LG+ + + P  R  V E+ G +  V+  MA + GAR++ I+ G  MGG L QP  H+PS FS+TG+F R+PFLLPNLV   +ALL +P V+  + ET +         F +  + S                                P    A  +     G L  R  S+ +  +  Q+      GV   N +  + KH +  L       TS+       G  GLL+   V+ L  +   +  +  GF  V+PLW L++V  GG+ W   +IG VL  +G   ++ Q   +P++ + +G    +       +  FL  P+ +  SW+    +   V  V +  CC +    A  +A  + VP+ LRG+LS L       GR         L A S++
Sbjct:    6 TGFYAGYVAGAFTLGRFLSGYLWGYVSDSVGRRPVILVGLSATAVLSLTFGLSTTYEVAISSRFVLGIMNGITPAVRTTVYEVCGTNSHVVQAMAYIDGARASTIVFGSAMGGLLVQPVDHYPSVFSATGLFGRFPFLLPNLVGMGVALLLLPTVIAYVPETKD---------FEKTRSRSXXXXXXXXXXXXXXXX---------XXXXXXSPARHRAVARHPPQGGKLAYR--SLEDGDVSAQQEAQETRGV---NDSGGRAKHKEGGLHAREPPVTSNREEQGLCGPGGLLSVPRVKPLLFLVCVVQSLLAGFEEVFPLWALSTVGVGGLDWGTMEIGKVLFLSGCIMVVAQVFIFPSVIKILGAVTWMRTGCLLGICTFLATPNAKLFSWNHTTLFAALVASVTVANCCLAAVGIALAVASTSIVPSRLRGKLSGLYGTAESFGRFASAVGSGVLFAWSIS 447          
BLAST of mRNA_H-elongata_contig1218.1667.1 vs. uniprot
Match: D8LP15_ECTSI (Transporter-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP15_ECTSI)

HSP 1 Score: 164 bits (415), Expect = 9.340e-44
Identity = 91/196 (46.43%), Postives = 123/196 (62.76%), Query Frame = 1
Query:  892 MELSLMVVRTGFFHVYPLWLLASVENGGMGWNLPKIGMVLGWTGVGGMLFQFIAYPALCRTIGIKNLLSILGPAAVFIFLVIPDIQCSSWSKQHSYPVGVTLVVLVECCTSVYVTATMLALANAVPAHLRGQLSTLLAMGGGLGRMVGPATLCALLACSLNLSSAGSGHSGVGYFVDYHLTFVIESFVMLTVVLLG 1479
            M+  + ++  GF  +YPLWLLAS ++GG+ W +PKIG VLGW+GVG +LFQF  YPALC+TIGI  LL   G  A   F+ +PDIQ ++WS+  S  VG  +V+ +  C SV  TA  LA ANAVP  +RG++  + A+    GR++GPA LC LLA SL  S+           +DYH  FVIE  +M  + +LG
Sbjct:    1 MQCLVSMMDAGFVQMYPLWLLASKDSGGLEWPVPKIGKVLGWSGVGQLLFQFFVYPALCKTIGIVWLLRGSGVLAAASFIFVPDIQRANWSENWSCVVGAAIVIFLGSCISVVETAMNLASANAVPVPMRGKIGGIFAVASSFGRVIGPAGLCTLLAWSLQSSNV---------LLDYHAVFVIEMVLMSVMFVLG 187          
BLAST of mRNA_H-elongata_contig1218.1667.1 vs. uniprot
Match: D8LP17_ECTSI (MFS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP17_ECTSI)

HSP 1 Score: 164 bits (416), Expect = 4.570e-42
Identity = 112/350 (32.00%), Postives = 178/350 (50.86%), Query Frame = 1
Query:    1 SGFYSGWLSGAYTLGNILSSYGWGRCADRFGRKSVLIISLSSLSVFSVALGLSTSYTGAIAVMFLLGLTDCLVPIARIVVPEILGPSKAVIGMALLPGARSAGIIIGPVMGGFLAQPAIHHPSFFSSTGIFARYPFLLPNLVAGIIALLSVPLVLLGLSET-----LERQGLTRNGSFARCHTHSSVGEE-------DIENKSI-NIIGSDNENGPRPLKSANPRPLDDEATGKRAAGILCMRENSVAE---DPLKEQEMVSFMEGVATRNAASWKEKHDKPALVRHHDTPTSSSWFGANGLLASRLVQSLFCMELSLMVVRTGFFHVYPLWLLASVENGGMGWNLPKIG 1002
            SG+Y+G+++ ++T G  L++Y WG  AD  GRK V+I+ LSS+   SV  GLSTS+  A+   F+LGLT+ ++P  R +  E+ GP   V GM  + G++  G+++G  +GG LAQPA  +P  FS+TG+FARYPFLLPNLV    AL+ + LV++ L ET      + +   R  +F   +  S  G +        +E K + +   +D+E     + +       D A+      +L  +   +A    +PLK+             +     E  D P   R  +         A GLL++  V+ +  +     +   GF  VYPLW +++ + GG+GW   +IG
Sbjct:   58 SGYYAGYVASSFTFGRFLTAYVWGNAADTIGRKPVVIVGLSSIMACSVVFGLSTSFAMAVGSRFVLGLTNGIMPAVRTLTREVCGPEHVVSGMNYIAGSKGVGLVMGTAIGGLLAQPASTYPGVFSATGVFARYPFLLPNLVGAGFALVMLALVIVFLPETRTSNKADARAAPRREAFPAANAISVAGRKLRKSSRSQLEYKPLKDNEEADSEQRKSAVSNYRSTKYRDAASPTGTELVLQGKRGRMATNRYEPLKDDGERGIQNDPTDNSCPGEGEGEDVPGPSRAEEIEPGMC--EAGGLLSTPNVKMVIFIAAMAQMSSIGFDEVYPLWAVSTTDVGGLGWAPVQIG 405          
BLAST of mRNA_H-elongata_contig1218.1667.1 vs. uniprot
Match: D8LJX7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJX7_ECTSI)

HSP 1 Score: 151 bits (381), Expect = 6.310e-37
Identity = 114/398 (28.64%), Postives = 183/398 (45.98%), Query Frame = 1
Query:  229 RIVVPEILGPSKAVIGMALLPGARSAGIIIGPVMGGFLAQPAIHHPSFFSSTGIFARYPFLLPNLVAGIIALLSVPLVLLGLSETLERQGLTRNGSFARCHTHSSVGEEDIENKSINIIGSDNE---NGPRPLKSANPRPLDDEATGKRAAGILCMRENSVAEDPLKEQEMVSFMEGVATRNAASWKEKHDKPALVRHHDTPTSSSWFGANGLLASRLVQSLFCMELSLMVVRTGFFHVYPLWLLASVENGGMGWNLPKIGMVLGWTGVGGMLFQFIAYPALCRTIGIKNLLSILGPAAVFIFLVIPDIQCSSWSKQHSYPVGVTLVVLVECCTSVYVTATMLALANAVPAHLRGQLSTLLAMGGGLGRMVGPATLCALLACSLNLSSAGSGHSGVGY 1413
            RI + E+ GP   ++GM  L   R+  +++G  +GG LAQPA+H+PS FS+TG+F RYPFLLPNLV    AL+ + LV++ L ET +   +    +F +      + +E  E+ S  +    +E   NG    ++    P     TG            S  ++  +E+E+     G+                             FG +GLL +  V++L  +   +  ++ GF   YPL+ L++ + GG+GWN  +IG VL  TG+    FQ +  P L + +GI N   +        F+ IP ++  SW+    +   V       C  +    A  +     VP+ +RG+L  L  M   LGR +GPA      A S++ SS+ +G   V +
Sbjct:    5 RISLNEVCGPKHVLVGMNYLNSCRAISMVVGTGVGGLLAQPAVHYPSVFSATGLFGRYPFLLPNLVGASCALVIMVLVIIYLPETKDYATIAAKRAFLQ---EQQLQQEQQEHTSDGVSNGCSEAMANGTNTNRTNRDEPPPSSPTG-----------TSDVDEKGEEEEI-----GI-----------------------------FGRHGLLVTPHVKTLLTLGCVVQALQIGFEEAYPLFALSTPDVGGLGWNTFQIGKVLVMTGLFMACFQLLLLPPLIKVVGITNWQRVGFVVGALAFIAIPSVRLLSWNYPSLFSASVAANTFASCGLAAVTLAMSVGSTTLVPSRMRGKLGGLYNMAESLGRFLGPAGFAITYAWSVSPSSSAAGFDWVNF 354          
BLAST of mRNA_H-elongata_contig1218.1667.1 vs. uniprot
Match: D7G0L9_ECTSI (MFS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0L9_ECTSI)

HSP 1 Score: 142 bits (357), Expect = 1.610e-33
Identity = 72/160 (45.00%), Postives = 105/160 (65.62%), Query Frame = 1
Query:    4 GFYSGWLSGAYTLGNILSSYGWGRCADRFGRKSVLIISLSSLSVFSVALGLSTSYTGAIAVMFLLGLTDCLVPIARIVVPEILGPSKAVIGMALLPGARSAGIIIGPVMGGFLAQPAIHHPSFFSSTGIFARYPFLLPNLVAGIIALLSVPLVLLGLSET 483
            GFY+G+++ ++T G  LS Y WG   DR GRK V+I+ L S+  FSV  G+S SYT AI    +LGLT+ ++P  R  + E+ G    V GM     A +  +I G  +GG LAQPA+H+P FFS+TG+F R+PFLLPNL+  ++++L++ L++  L ET
Sbjct:   31 GFYAGYVASSFTFGRFLSGYFWGFVTDRLGRKPVIIMGLLSMITFSVLFGISRSYTMAITTRLVLGLTNGIMPALRTTLSEVCGKKHVVRGMTYTSAATAISLIFGTGIGGLLAQPALHYPGFFSATGLFGRFPFLLPNLMGAVMSVLTLILIVFFLPET 190          
BLAST of mRNA_H-elongata_contig1218.1667.1 vs. uniprot
Match: D8LET2_ECTSI (MFS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LET2_ECTSI)

HSP 1 Score: 135 bits (341), Expect = 3.600e-32
Identity = 87/235 (37.02%), Postives = 133/235 (56.60%), Query Frame = 1
Query:    1 SGFYSGWLSGAYTLGNILSSYGWGRCADRFGRKSVLIISLSSLSVFSVALGLSTSYTGAIAVMFLLGLTDCLVPIARIVVPEILGPSKAVI-GMALLPGARSAGIIIGPVMGGFLAQPAIHHPSFFSSTGIFARYPFLLPNLVAGIIALLSVPLVLLGLSETLERQ------------------GLTRNGSFARCHT------------HSSVGEEDI-------ENKSINIIGS 591
            SGFY+G+++ AY LG+ LS Y WG  +D  GRK V+++ L +++V S+  GLST+Y  AI+  F+LG+ + ++P  R  V E+   +  V+  MA + GA++  I+ G  MGG L QP  H+P+ FS TG+F R+PFLLPNLV   +ALL +P+V+  + ET + +                  GL+   S AR  T            ++S+G+ED+       E +S+N  GS
Sbjct:   60 SGFYAGYVASAYMLGHFLSGYLWGYASDSVGRKPVILVGLLAVAVLSLTFGLSTTYELAISSRFVLGVMNGIMPAIRTTVYEVCTTNSHVVQAMAYIDGAKAVTIVFGSAMGGLLVQPVDHYPNVFSGTGLFGRFPFLLPNLVGVGLALLILPIVIACVPETKDFEDTCSRSRFSSVSSGEATSGLSAESSPARDRTIVRRPPKGGALAYTSLGDEDVSAQQAAQEPRSVNDSGS 294          
BLAST of mRNA_H-elongata_contig1218.1667.1 vs. uniprot
Match: D8LRH9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRH9_ECTSI)

HSP 1 Score: 140 bits (352), Expect = 6.800e-32
Identity = 77/194 (39.69%), Postives = 117/194 (60.31%), Query Frame = 1
Query:    1 SGFYSGWLSGAYTLGNILSSYGWGRCADRFGRKSVLIISLSSLSVFSVALGLSTSYTGAIAVMFLLGLTDCLVPIARIVVPEILGPSKAVIGMALLPGARSAGIIIGPVMGGFLAQPAIHHPSFFSSTGIFARYPFLLPNLVAGIIALLSVPLVLLGLSETLERQGLTRNGSFARCHTHSSVGEEDIENKSINI 582
            +G+Y+G++S A+ +G + SSY WGR AD  GR  V+   L+S+ V S+A GLSTS+  A+   FLLG+ + L+ I++ +  E+ G      GMA + G  S G++IGP +GG LA+PA H+P+ FS +G+F R+P+LLPN+V   IAL  +P V   L ET               H H++ G+   E K +++
Sbjct:   68 AGYYAGYVSSAFMVGRVGSSYFWGRFADSHGRLPVIYAGLTSMVVLSIAFGLSTSFLWALGCRFLLGVLNGLLGISKAMTSEVCGKEHEATGMAYVLGCASIGLVIGPGLGGLLAEPATHYPTVFSQSGLFGRFPYLLPNIVGAGIALTGLPFVFFFLKETR--------------HVHNNRGDSSGEFKLLSV 247          
BLAST of mRNA_H-elongata_contig1218.1667.1 vs. uniprot
Match: A0A6H5JEL7_9PHAE (MFS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEL7_9PHAE)

HSP 1 Score: 130 bits (328), Expect = 9.100e-32
Identity = 74/189 (39.15%), Postives = 109/189 (57.67%), Query Frame = 1
Query:    4 GFYSGWLSGAYTLGNILSSYGWGRCADRFGRKSVLIISLSSLSVFSVALGLSTSYTGAIAVMFLLGLTDCLVPIARIVVPEILGPSKAVIG---------MALLPGARSA--------------------GIIIGPVMGGFLAQPAIHHPSFFSSTGIFARYPFLLPNLVAGIIALLSVPLVLLGLSET 483
            GFY+G+++ ++T G  LS Y WG   D  GRK V+II L S+++FS+  G+S +Y  AI   F+LGLT+ ++P  R  + E+ GP   V+G         + L   ARS                      ++IG  +GG L QPA+H+P+ FS TG+FARYPFLLPNLV  ++++ ++ LV+  L ET
Sbjct:   11 GFYAGYVASSFTFGRFLSGYAWGSATDIIGRKPVIIIGLLSITIFSIIFGMSETYAMAIITRFILGLTNGIMPALRTSLSEVCGPEHVVLGKQRATITKDLLLSRLARSVVQNESHFPTQTLNSHVSGAISMVIGTGIGGLLVQPALHYPTLFSPTGLFARYPFLLPNLVGAVLSVFALVLVIFYLPET 199          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1218.1667.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0M0_ECTSI6.160e-5729.96MFS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KXK7_9PHAE1.840e-4846.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJK9_ECTSI1.920e-4830.32MFS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LP15_ECTSI9.340e-4446.43Transporter-like protein n=1 Tax=Ectocarpus silicu... [more]
D8LP17_ECTSI4.570e-4232.00MFS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LJX7_ECTSI6.310e-3728.64Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G0L9_ECTSI1.610e-3345.00MFS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LET2_ECTSI3.600e-3237.02MFS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LRH9_ECTSI6.800e-3239.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JEL7_9PHAE9.100e-3239.15MFS domain-containing protein n=1 Tax=Ectocarpus s... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig1218contigH-elongata_contig1218:3758..6860 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score211.5
Seed ortholog evalue9.3e-52
Seed eggNOG ortholog2880.D7G0M0
EggNOG free text desc.major facilitator superfamily
EggNOG OGsKOG2615@1,KOG2615@2759
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal anchor
Exons8
Model size1500
Cds size1500
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig1218.1667.1prot_H-elongata_contig1218.1667.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig1218 3758..6860 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929717.0119011-CDS-H-elongata_contig1218:3757..39451622929717.0119011-CDS-H-elongata_contig1218:3757..3945Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1218 3758..3945 +
1691679130.3949828-CDS-H-elongata_contig1218:3757..39451691679130.3949828-CDS-H-elongata_contig1218:3757..3945Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1218 3758..3945 +
1622929717.0295832-CDS-H-elongata_contig1218:4034..41381622929717.0295832-CDS-H-elongata_contig1218:4034..4138Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1218 4035..4138 +
1691679130.410062-CDS-H-elongata_contig1218:4034..41381691679130.410062-CDS-H-elongata_contig1218:4034..4138Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1218 4035..4138 +
1622929717.050269-CDS-H-elongata_contig1218:4369..44751622929717.050269-CDS-H-elongata_contig1218:4369..4475Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1218 4370..4475 +
1691679130.4202223-CDS-H-elongata_contig1218:4369..44751691679130.4202223-CDS-H-elongata_contig1218:4369..4475Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1218 4370..4475 +
1622929717.0662713-CDS-H-elongata_contig1218:4623..47221622929717.0662713-CDS-H-elongata_contig1218:4623..4722Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1218 4624..4722 +
1691679130.4298942-CDS-H-elongata_contig1218:4623..47221691679130.4298942-CDS-H-elongata_contig1218:4623..4722Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1218 4624..4722 +
1622929717.0822775-CDS-H-elongata_contig1218:5149..55611622929717.0822775-CDS-H-elongata_contig1218:5149..5561Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1218 5150..5561 +
1691679130.4392357-CDS-H-elongata_contig1218:5149..55611691679130.4392357-CDS-H-elongata_contig1218:5149..5561Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1218 5150..5561 +
1622929717.0955942-CDS-H-elongata_contig1218:5905..60011622929717.0955942-CDS-H-elongata_contig1218:5905..6001Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1218 5906..6001 +
1691679130.447934-CDS-H-elongata_contig1218:5905..60011691679130.447934-CDS-H-elongata_contig1218:5905..6001Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1218 5906..6001 +
1622929717.1122615-CDS-H-elongata_contig1218:6118..63401622929717.1122615-CDS-H-elongata_contig1218:6118..6340Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1218 6119..6340 +
1691679130.4564836-CDS-H-elongata_contig1218:6118..63401691679130.4564836-CDS-H-elongata_contig1218:6118..6340Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1218 6119..6340 +
1622929717.1292741-CDS-H-elongata_contig1218:6587..68601622929717.1292741-CDS-H-elongata_contig1218:6587..6860Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1218 6588..6860 +
1691679130.4663112-CDS-H-elongata_contig1218:6587..68601691679130.4663112-CDS-H-elongata_contig1218:6587..6860Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1218 6588..6860 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig1218.1667.1

>prot_H-elongata_contig1218.1667.1 ID=prot_H-elongata_contig1218.1667.1|Name=mRNA_H-elongata_contig1218.1667.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=500bp
SGFYSGWLSGAYTLGNILSSYGWGRCADRFGRKSVLIISLSSLSVFSVAL
GLSTSYTGAIAVMFLLGLTDCLVPIARIVVPEILGPSKAVIGMALLPGAR
SAGIIIGPVMGGFLAQPAIHHPSFFSSTGIFARYPFLLPNLVAGIIALLS
VPLVLLGLSETLERQGLTRNGSFARCHTHSSVGEEDIENKSINIIGSDNE
NGPRPLKSANPRPLDDEATGKRAAGILCMRENSVAEDPLKEQEMVSFMEG
VATRNAASWKEKHDKPALVRHHDTPTSSSWFGANGLLASRLVQSLFCMEL
SLMVVRTGFFHVYPLWLLASVENGGMGWNLPKIGMVLGWTGVGGMLFQFI
AYPALCRTIGIKNLLSILGPAAVFIFLVIPDIQCSSWSKQHSYPVGVTLV
VLVECCTSVYVTATMLALANAVPAHLRGQLSTLLAMGGGLGRMVGPATLC
ALLACSLNLSSAGSGHSGVGYFVDYHLTFVIESFVMLTVVLLGFYTFTL*
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mRNA from alignment at H-elongata_contig1218:3758..6860+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig1218.1667.1 ID=mRNA_H-elongata_contig1218.1667.1|Name=mRNA_H-elongata_contig1218.1667.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3103bp|location=Sequence derived from alignment at H-elongata_contig1218:3758..6860+ (Himanthalia elongata Himel1 dioecious)
TCAGGTTTTTATTCCGGCTGGCTATCCGGCGCTTACACCCTCGGTAATAT TCTGTCTAGCTATGGCTGGGGCCGCTGCGCGGATCGTTTCGGACGGAAAT CCGTCTTGATCATCAGTTTGTCTTCACTCAGCGTCTTCTCCGTCGCTTTG GGCCTTTCAACATCTTACACTGGGGCGATCGCTGTCATGTAAGCAACAGT TTACGTCGTCGTCCGTATTGTTGCACTTGTTCTCCAGCTCGGCTTAACCT TCACGCTGCATTCAACGTTCTCCGCAGGTTTCTCCTCGGGCTGACCGACT GCCTTGTTCCTATTGCGAGAATTGTGGTCCCCGAGATCCTAGGTCCCTCA AAAGCTGTGATTGGGATGGCTCTCCTTCCCGGTGAGCGATCCTACAGACG AACTTGACACCGTGGAGGCAATTACTGAGTGAACGAACTATGTTTGTCAC TCTAGAATACGGAAAGGTTCGGAGAGAGAGGGTCGATAATGGAAGCCTAA CTATTCTACATCTGTCGCCTTCAGCCTGTAAAAAATGCTGGGTGTTTAGG TGCGATGTGTCGCGCCGCGTTACTATTTTCGTGTCTGACTCTTCTTACCG CCCGCTTCTCAGGTGCCCGATCCGCTGGGATCATCATCGGACCAGTGATG GGAGGCTTTCTTGCCCAACCGGCCATCCACCACCCATCTTTCTTTTCGTC GACGGGGATATTCGCGAGGTATACTATAATATACTATGGGTTTATAATGG CATCGCGCAAGGCTTTGGTTGCGCAAAACGGTTGCGTTCAGACGGCAGGG TATTCTAGCGTAACTATCTAACCCCGTGTCTTCTACCTCAACTTTTGCTC CTTGCGAATGCTGCAGGTATCCCTTTCTTCTGCCTAACCTGGTCGCGGGA ATCATAGCACTCTTGAGTGTTCCTCTAGTACTCCTGGGACTGTCAGAAAC GCTGGAAAGACAGGGGTTTGTTCGCCACAAACGCTTGTCATCAAGGTGAG AGGTGATGACATGAGATAAAAATAATTATCTTACGACGTTTCACATCTAG TTGCTACCACATGCATGTGACTGAGCTTTTGTTGCAGCGGTGCAGCTGCG CACTACTCTCGCAAACAGTGCCCGTTTGATCTATATATTGGGAGGATTGG TCTTGTGGTGGAGCTTTGAGTCTTTTCGTTTGACGAATATTTCTGTCGCT AAAATTAAAGAAAGGCGATATATATATATATAATGTTGACGTACAGTCAA CGTCTCTATTCTACAGGCGAACAAAACACGAGCTACATGACTACCCAGGT GGGAGCGCTTGACGATAGAGCTCGAGATGCGTTAGCGATATGCTGCCTGC ACTGGATGCACTCTTCTCCGCCTTCCTTCGGCTTGCCCTTAGTTTGACGC GCAATGGTTCGTTTGCGCGTTGTCATACCCATTCAAGCGTTGGCGAGGAG GACATTGAAAACAAGAGTATCAATATCATCGGCTCGGACAACGAAAATGG CCCAAGACCCTTGAAATCCGCAAATCCTCGCCCCCTTGATGACGAAGCAA CGGGTAAACGCGCAGCTGGAATTCTTTGCATGAGAGAAAACAGCGTTGCT GAAGATCCACTCAAGGAGCAGGAAATGGTCTCGTTTATGGAAGGAGTAGC AACTCGAAATGCTGCGAGCTGGAAAGAAAAACACGACAAACCTGCCCTGG TTCGACACCATGATACCCCGACTTCGTCGTCGTGGTTCGGGGCGAACGGT CTGCTAGCCTCGCGGCTCGTACAATCACTTTTCTGCATGGAGCTCTCGCT CATGGTGATGGCTGAGAAGTAAAATGTTGCAGGTCTTTTTTGCAGGGAAG AGGTCGACAAATAGGCGGTAGCTTGTGATATTTTCAGCGCTTGAAATTAC TAAAAATTATCGAGTTCATATGGAGCGTGATGCGGCTCCCCAAAGTTTAT TGTCTGGTTGTACATCAGTGTAATTTTTTCACACGCAGGAAACGCCCTTG CGTTTTGCAAGGTGTACTTGAATATCTTCTCAAAAATAAACTCTCCTCCT CTTGAAAATTATGGACGTCGCTCCGGTCCTGGCCGACGCGTTGGCGCGAT ATATTCCCAACCACATGCTTCTACCGATCCATCTGGTGCCCGCGGTAGGT CGTGCGCACAGGTTTCTTTCATGTGTACCCTCTCTGGTTACTTGCAAGCG TGGAGAATGGAGGGATGGGCTGGAACTTACCCAAGATTGGAATGGTGCGA ACATAATGGACACTGGTAGGAATTAGATCCGACCGCTCGACTATGTTGGC CCTGGATGTCGGGAAGCACGATGCAGACGATTAACTCTTCCTGAAAATTG TCATCATGCAGGTGTTGGGATGGACCGGGGTCGGAGGGATGCTATTCCAG TTCATCGCGTATCCTGCTCTCTGTCGGACGATTGGGATCAAAAACCTGCT GAGCATTCTAGGCCCAGCTGCTGTTTTTATATTTCTCGTAATCCCGGACA TCCAATGCTCGAGCTGGAGTAAGCAACACTCATATCCCGTGGGAGTAACC CTTGTAGTCCTGGTGGAATGCTGCACCTCCGTGGTGAGTTGGGTTCCACG GCGTCGGTGATGCTCGCTGTTTGGATCTTGTCACACCGGCGTCCAATTCC CGAAATACTGAGAATTCGTGTAAGATATCCTGAAGAGTTATTCATAGTAT ACTTAAAACCGTGTCCAACACCAGCTCTCCCCTCCCACCCCTCTCCAACT AGAGCTCACAAACTAACGATAGTCATAAGGGTACACTCAAGGCGTATTCC CTCCGCTCCCCTTCATCCCACGGCGAGCAGTACGTCACCGCGACAATGCT CGCTTTGGCAAACGCGGTTCCGGCACACTTGAGGGGGCAATTGAGTACAC TCCTTGCGATGGGTGGTGGTCTCGGAAGGATGGTGGGTCCCGCCACTCTA TGTGCTCTGCTGGCGTGTTCGCTCAATCTCTCTTCGGCAGGGAGTGGCCA TAGCGGGGTAGGCTATTTCGTGGACTACCACTTGACATTCGTGATCGAGT CGTTCGTTATGCTGACTGTAGTGTTACTGGGTTTCTACACGTTTACGCTT TGA
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Coding sequence (CDS) from alignment at H-elongata_contig1218:3758..6860+

>mRNA_H-elongata_contig1218.1667.1 ID=mRNA_H-elongata_contig1218.1667.1|Name=mRNA_H-elongata_contig1218.1667.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3000bp|location=Sequence derived from alignment at H-elongata_contig1218:3758..6860+ (Himanthalia elongata Himel1 dioecious)
TCAGGTTTTTATTCCGGCTGGCTATCCGGCGCTTACACCCTCGGTAATAT
TCTGTCTAGCTATGGCTGGGGCCGCTGCGCGGATCGTTTCGGACGGAAAT
CCGTCTTGATCATCAGTTTGTCTTCACTCAGCGTCTTCTCCGTCGCTTTG
GGCCTTTCAACATCTTACACTGGGGCGATCGCTGTCATTCAGGTTTTTAT
TCCGGCTGGCTATCCGGCGCTTACACCCTCGGTAATATTCTGTCTAGCTA
TGGCTGGGGCCGCTGCGCGGATCGTTTCGGACGGAAATCCGTCTTGATCA
TCAGTTTGTCTTCACTCAGCGTCTTCTCCGTCGCTTTGGGCCTTTCAACA
TCTTACACTGGGGCGATCGCTGTCATGTTTCTCCTCGGGCTGACCGACTG
CCTTGTTCCTATTGCGAGAATTGTGGTCCCCGAGATCCTAGGTCCCTCAA
AAGCTGTGATTGGGATGGCTCTCCTTCCCGGTTTCTCCTCGGGCTGACCG
ACTGCCTTGTTCCTATTGCGAGAATTGTGGTCCCCGAGATCCTAGGTCCC
TCAAAAGCTGTGATTGGGATGGCTCTCCTTCCCGGTGCCCGATCCGCTGG
GATCATCATCGGACCAGTGATGGGAGGCTTTCTTGCCCAACCGGCCATCC
ACCACCCATCTTTCTTTTCGTCGACGGGGATATTCGCGAGGTGCCCGATC
CGCTGGGATCATCATCGGACCAGTGATGGGAGGCTTTCTTGCCCAACCGG
CCATCCACCACCCATCTTTCTTTTCGTCGACGGGGATATTCGCGAGGTAT
CCCTTTCTTCTGCCTAACCTGGTCGCGGGAATCATAGCACTCTTGAGTGT
TCCTCTAGTACTCCTGGGACTGTCAGAAACGCTGGAAAGACAGGGGTATC
CCTTTCTTCTGCCTAACCTGGTCGCGGGAATCATAGCACTCTTGAGTGTT
CCTCTAGTACTCCTGGGACTGTCAGAAACGCTGGAAAGACAGGGTTTGAC
GCGCAATGGTTCGTTTGCGCGTTGTCATACCCATTCAAGCGTTGGCGAGG
AGGACATTGAAAACAAGAGTATCAATATCATCGGCTCGGACAACGAAAAT
GGCCCAAGACCCTTGAAATCCGCAAATCCTCGCCCCCTTGATGACGAAGC
AACGGGTAAACGCGCAGCTGGAATTCTTTGCATGAGAGAAAACAGCGTTG
CTGAAGATCCACTCAAGGAGCAGGAAATGGTCTCGTTTATGGAAGGAGTA
GCAACTCGAAATGCTGCGAGCTGGAAAGAAAAACACGACAAACCTGCCCT
GGTTCGACACCATGATACCCCGACTTCGTCGTCGTGGTTCGGGGCGAACG
GTCTGCTAGCCTCGCGGCTCGTACAATCACTTTTCTGCATGGAGCTCTCG
CTCATGTTTGACGCGCAATGGTTCGTTTGCGCGTTGTCATACCCATTCAA
GCGTTGGCGAGGAGGACATTGAAAACAAGAGTATCAATATCATCGGCTCG
GACAACGAAAATGGCCCAAGACCCTTGAAATCCGCAAATCCTCGCCCCCT
TGATGACGAAGCAACGGGTAAACGCGCAGCTGGAATTCTTTGCATGAGAG
AAAACAGCGTTGCTGAAGATCCACTCAAGGAGCAGGAAATGGTCTCGTTT
ATGGAAGGAGTAGCAACTCGAAATGCTGCGAGCTGGAAAGAAAAACACGA
CAAACCTGCCCTGGTTCGACACCATGATACCCCGACTTCGTCGTCGTGGT
TCGGGGCGAACGGTCTGCTAGCCTCGCGGCTCGTACAATCACTTTTCTGC
ATGGAGCTCTCGCTCATGGTCGTGCGCACAGGTTTCTTTCATGTGTACCC
TCTCTGGTTACTTGCAAGCGTGGAGAATGGAGGGATGGGCTGGAACTTAC
CCAAGATTGGAATGGTCGTGCGCACAGGTTTCTTTCATGTGTACCCTCTC
TGGTTACTTGCAAGCGTGGAGAATGGAGGGATGGGCTGGAACTTACCCAA
GATTGGAATGGTGTTGGGATGGACCGGGGTCGGAGGGATGCTATTCCAGT
TCATCGCGTATCCTGCTCTCTGTCGGACGATTGGGATCAAAAACCTGCTG
AGCATTCTAGGCCCAGCTGCTGTTTTTATATTTCTCGTAATCCCGGACAT
CCAATGCTCGAGCTGGAGTAAGCAACACTCATATCCCGTGGGAGTAACCC
TTGTAGTCCTGGTGGAATGCTGCACCTCCGTGGTGTTGGGATGGACCGGG
GTCGGAGGGATGCTATTCCAGTTCATCGCGTATCCTGCTCTCTGTCGGAC
GATTGGGATCAAAAACCTGCTGAGCATTCTAGGCCCAGCTGCTGTTTTTA
TATTTCTCGTAATCCCGGACATCCAATGCTCGAGCTGGAGTAAGCAACAC
TCATATCCCGTGGGAGTAACCCTTGTAGTCCTGGTGGAATGCTGCACCTC
CGTGTACGTCACCGCGACAATGCTCGCTTTGGCAAACGCGGTTCCGGCAC
ACTTGAGGGGGCAATTGAGTACACTCCTTGCGATGGGTGGTGGTCTCGGA
AGGATGGTGGGTCCCGCCACTCTATGTGCTCTGCTGGCGTGTTCGCTCAA
TCTCTCTTCGGCAGGGAGTGGCCATAGCGGGGTAGGCTATTTCGTGGACT
ACCACTTGACATTCGTGATCGAGTCGTTCGTTATGCTGACTGTAGTGTTA
CTGGGTTTCTACACGTTTACGCTTTGATACGTCACCGCGACAATGCTCGC
TTTGGCAAACGCGGTTCCGGCACACTTGAGGGGGCAATTGAGTACACTCC
TTGCGATGGGTGGTGGTCTCGGAAGGATGGTGGGTCCCGCCACTCTATGT
GCTCTGCTGGCGTGTTCGCTCAATCTCTCTTCGGCAGGGAGTGGCCATAG
CGGGGTAGGCTATTTCGTGGACTACCACTTGACATTCGTGATCGAGTCGT
TCGTTATGCTGACTGTAGTGTTACTGGGTTTCTACACGTTTACGCTTTGA
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