mRNA_H-elongata_contig120842.1601.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig120842.1601.1 vs. uniprot
Match: RBL_ECTSI (Ribulose bisphosphate carboxylase large chain n=2255 Tax=PX clade TaxID=569578 RepID=RBL_ECTSI) HSP 1 Score: 952 bits (2461), Expect = 0.000e+0 Identity = 464/488 (95.08%), Postives = 481/488 (98.57%), Query Frame = 1
Query: 1 MPENVQERTRIKSERYESGVIPYAKMGYWDADYNVKDTDILALFRITPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPGTSDQFFAYVAYECDLFEEGSLANLTASIIGNVFGFKAVKALRLEDMRIPFAYLKTFQGPATGVIVERERLDKFGRPLLGATVKPKLGLSGKNYGRVVYEGLRGGLDFLKDDENINSQPFMRWKERFLYCMEGVNRAAAATGEVKGSYLNVTAATIEQMYERAEYAHAIGSVIVMVDLVIGYTAIQTMAIWARKAEMILHLHRAGNSTYARQKNHGINFRVICKWMRMCGVDHIHAGTVVGKLEGDPLMVRGFYNSLLLTQLKVNLAEGLFFDMDWASLRKCVPVASGGIHCGQMHQLLYYLGDDVVLQFGGGTIGHPDGIQAGATANRVALEAMVLARNEGRDYVGEGPEILRNAASTCGPLKAALDLWKDITFEYTSTDTPDFVEVATESK 1464
MPE+VQ RTRIKSERYESGVIPYAKMGYWDADY +KDTDILALFRITPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPGTSDQFFAY+AYECDLFEEGSLANLTASIIGNVFGFKAVKALRLEDMRIP+AYLKTFQGPATGV+VERERLDKFGRP LGATVKPKLGLSGKNYGRVVYEGL GGLDFLKDDENINSQPFMRWKERFLYCMEGVNRAAAATGEVKGSYLN+TAAT+EQMYERAEYAHAIGSVIVM+DLVIGYTAIQ+MAIWARKAE+ILHLHRAGNSTYARQKNHGINFRVICKWMRMCGVDHIHAGTVVGKLEGDPLMV+GFYNSLLLT LK+NLAEGLFFDMDWASLRKCVPVASGGIHCGQMHQLLYYLGDDVVLQFGGGTIGHPDGIQ+GATANRVALE+MVLARNEGRDYVGEGP+ILR AASTCGPLKAALDLWKDITF+YTSTDTPDFVEVAT S+
Sbjct: 1 MPEDVQNRTRIKSERYESGVIPYAKMGYWDADYKLKDTDILALFRITPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPGTSDQFFAYIAYECDLFEEGSLANLTASIIGNVFGFKAVKALRLEDMRIPYAYLKTFQGPATGVVVERERLDKFGRPFLGATVKPKLGLSGKNYGRVVYEGLTGGLDFLKDDENINSQPFMRWKERFLYCMEGVNRAAAATGEVKGSYLNITAATVEQMYERAEYAHAIGSVIVMIDLVIGYTAIQSMAIWARKAEVILHLHRAGNSTYARQKNHGINFRVICKWMRMCGVDHIHAGTVVGKLEGDPLMVKGFYNSLLLTHLKINLAEGLFFDMDWASLRKCVPVASGGIHCGQMHQLLYYLGDDVVLQFGGGTIGHPDGIQSGATANRVALESMVLARNEGRDYVGEGPDILRRAASTCGPLKAALDLWKDITFDYTSTDTPDFVEVATGSR 488
BLAST of mRNA_H-elongata_contig120842.1601.1 vs. uniprot
Match: A0A858LFZ1_9STRA (Ribulose bisphosphate carboxylase large chain n=9 Tax=Ochrophyta TaxID=2696291 RepID=A0A858LFZ1_9STRA) HSP 1 Score: 922 bits (2384), Expect = 0.000e+0 Identity = 450/488 (92.21%), Postives = 474/488 (97.13%), Query Frame = 1
Query: 1 MPENVQERTRIKSERYESGVIPYAKMGYWDADYNVKDTDILALFRITPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPGTSDQFFAYVAYECDLFEEGSLANLTASIIGNVFGFKAVKALRLEDMRIPFAYLKTFQGPATGVIVERERLDKFGRPLLGATVKPKLGLSGKNYGRVVYEGLRGGLDFLKDDENINSQPFMRWKERFLYCMEGVNRAAAATGEVKGSYLNVTAATIEQMYERAEYAHAIGSVIVMVDLVIGYTAIQTMAIWARKAEMILHLHRAGNSTYARQKNHGINFRVICKWMRMCGVDHIHAGTVVGKLEGDPLMVRGFYNSLLLTQLKVNLAEGLFFDMDWASLRKCVPVASGGIHCGQMHQLLYYLGDDVVLQFGGGTIGHPDGIQAGATANRVALEAMVLARNEGRDYVGEGPEILRNAASTCGPLKAALDLWKDITFEYTSTDTPDFVEVATESK 1464
M +NVQERTRIKSERYESGVIPYAKMGYWDADYN+K TDILALFRITPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPGT+DQFFAY+AYEC+LFEEGSLANLTASIIGNVFGFKAVKALRLEDMRIPF+YLKTFQGPATG+IVERER+DKFGRPLLGATVKPKLGLSGKNYGRVVYEGLRGGLDFLKDDENINSQPFMRW+ERFLYCMEGVNRA+AATGEVKGSYLN TAATIE+MYERA YA IGS+I+MVDLVIGYTAIQTMAIWARK +MILHLHRAGNSTYARQKNHGINFRVICKWMRM GVDHIHAGTVVGKLEGDPLMV+GFYN+LL T+L +NL++GLFFDMDWASLRK VPVASGGIHCGQMHQLLYYLGDDVVLQFGGGTIGHPDGIQAGATANRVALEAMVLARNEGRDY+ EGP+ILR+AA TCGPLK ALDLWKDITF+YTSTDTPDFVEVATESK
Sbjct: 1 MSKNVQERTRIKSERYESGVIPYAKMGYWDADYNIKHTDILALFRITPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPGTTDQFFAYIAYECELFEEGSLANLTASIIGNVFGFKAVKALRLEDMRIPFSYLKTFQGPATGLIVERERMDKFGRPLLGATVKPKLGLSGKNYGRVVYEGLRGGLDFLKDDENINSQPFMRWRERFLYCMEGVNRASAATGEVKGSYLNTTAATIEEMYERALYAKEIGSIIIMVDLVIGYTAIQTMAIWARKHDMILHLHRAGNSTYARQKNHGINFRVICKWMRMSGVDHIHAGTVVGKLEGDPLMVKGFYNTLLETKLSINLSQGLFFDMDWASLRKVVPVASGGIHCGQMHQLLYYLGDDVVLQFGGGTIGHPDGIQAGATANRVALEAMVLARNEGRDYLNEGPQILRDAAKTCGPLKTALDLWKDITFDYTSTDTPDFVEVATESK 488
BLAST of mRNA_H-elongata_contig120842.1601.1 vs. uniprot
Match: Q8HSH1_9STRA (Ribulose bisphosphate carboxylase large chain n=106 Tax=root TaxID=1 RepID=Q8HSH1_9STRA) HSP 1 Score: 905 bits (2338), Expect = 0.000e+0 Identity = 435/488 (89.14%), Postives = 472/488 (96.72%), Query Frame = 1
Query: 1 MPENVQERTRIKSERYESGVIPYAKMGYWDADYNVKDTDILALFRITPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPGTSDQFFAYVAYECDLFEEGSLANLTASIIGNVFGFKAVKALRLEDMRIPFAYLKTFQGPATGVIVERERLDKFGRPLLGATVKPKLGLSGKNYGRVVYEGLRGGLDFLKDDENINSQPFMRWKERFLYCMEGVNRAAAATGEVKGSYLNVTAATIEQMYERAEYAHAIGSVIVMVDLVIGYTAIQTMAIWARKAEMILHLHRAGNSTYARQKNHGINFRVICKWMRMCGVDHIHAGTVVGKLEGDPLMVRGFYNSLLLTQLKVNLAEGLFFDMDWASLRKCVPVASGGIHCGQMHQLLYYLGDDVVLQFGGGTIGHPDGIQAGATANRVALEAMVLARNEGRDYVGEGPEILRNAASTCGPLKAALDLWKDITFEYTSTDTPDFVEVATESK 1464
M ++VQERTRIKS+RYESGVIPYAKMGYWDA YNVK TDILALFRITPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPGT+DQ+FAY++Y+C+LFEEGSLANLTASIIGNVFGFKAVKALRLEDMRIPFAYLKTFQGPATG++VERER+DKFGRP LGATVKPKLGLSGKNYGRVVYEGLRGGLDFLKDDENINSQPFMRW+ERFLYCMEGVNRAAAATGE+KGSYLN TA T+E+MYERAEYA +G++IVM+DLV+GYTAIQ+MAIWARKA+MILHLHRAGNSTYARQKNHGINFRVICKWMRM GVDHIHAGTVVGKLEGDPLMV+GFYN+LL T+L +NL +GLFF+M+WA+LRK VPVASGGIHCGQMHQLLYYLGDDVVLQFGGGTIGHPDGIQAGATANRVALEAMVLARNEGRDY+ EGP+ILR+AA TCGPLK ALDLWKDITF+YTSTDTPDFVE+AT+SK
Sbjct: 1 MSKSVQERTRIKSQRYESGVIPYAKMGYWDAFYNVKHTDILALFRITPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPGTTDQYFAYISYQCELFEEGSLANLTASIIGNVFGFKAVKALRLEDMRIPFAYLKTFQGPATGLVVERERMDKFGRPFLGATVKPKLGLSGKNYGRVVYEGLRGGLDFLKDDENINSQPFMRWRERFLYCMEGVNRAAAATGEIKGSYLNTTAGTMEEMYERAEYAKQLGTIIVMIDLVVGYTAIQSMAIWARKADMILHLHRAGNSTYARQKNHGINFRVICKWMRMAGVDHIHAGTVVGKLEGDPLMVKGFYNTLLETKLDINLPQGLFFEMEWAALRKTVPVASGGIHCGQMHQLLYYLGDDVVLQFGGGTIGHPDGIQAGATANRVALEAMVLARNEGRDYLNEGPQILRDAAKTCGPLKTALDLWKDITFDYTSTDTPDFVEIATKSK 488
BLAST of mRNA_H-elongata_contig120842.1601.1 vs. uniprot
Match: B8LGQ9_9STRA (Ribulose bisphosphate carboxylase large chain n=186 Tax=root TaxID=1 RepID=B8LGQ9_9STRA) HSP 1 Score: 902 bits (2330), Expect = 0.000e+0 Identity = 436/488 (89.34%), Postives = 464/488 (95.08%), Query Frame = 1
Query: 1 MPENVQERTRIKSERYESGVIPYAKMGYWDADYNVKDTDILALFRITPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPGTSDQFFAYVAYECDLFEEGSLANLTASIIGNVFGFKAVKALRLEDMRIPFAYLKTFQGPATGVIVERERLDKFGRPLLGATVKPKLGLSGKNYGRVVYEGLRGGLDFLKDDENINSQPFMRWKERFLYCMEGVNRAAAATGEVKGSYLNVTAATIEQMYERAEYAHAIGSVIVMVDLVIGYTAIQTMAIWARKAEMILHLHRAGNSTYARQKNHGINFRVICKWMRMCGVDHIHAGTVVGKLEGDPLMVRGFYNSLLLTQLKVNLAEGLFFDMDWASLRKCVPVASGGIHCGQMHQLLYYLGDDVVLQFGGGTIGHPDGIQAGATANRVALEAMVLARNEGRDYVGEGPEILRNAASTCGPLKAALDLWKDITFEYTSTDTPDFVEVATESK 1464
M +NVQERTRIKSERYESGVIPYAKMGYWDADYN+ TDILALFRITPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPGT+DQFFAY+AY+C+LFEEGSLANLTASIIGNVFGFKAVKALRLEDMRIPFAYLKTFQGPATG++VERER+DKFGRP LGATVKPKLGLSGKNYGRVVYEGLRGGLDFLKDDENINSQPFMRW+ERFLYCMEG+NRAAA+TGEVKGSYLNVTA +E MYERAEYA IGS+IVM+DLVIGYTAIQ+M IWARK +MILHLHRAGNSTYARQKNHGINFRVICKWMRM GVDHIHAGTVVGKLEGDPLMV+GFYN+LL T L +NL +G+FF+MDWA LRK VPVASGGIHCGQMHQL YYLGDDVVLQFGGGTIGHPDGIQAGATANRVALE+MVLARNEGRDY+ EGP+ILR+AA CGPLK ALDLWKDITF+YTSTDTPDFVE ATESK
Sbjct: 1 MSKNVQERTRIKSERYESGVIPYAKMGYWDADYNIAHTDILALFRITPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPGTTDQFFAYIAYQCELFEEGSLANLTASIIGNVFGFKAVKALRLEDMRIPFAYLKTFQGPATGLVVERERMDKFGRPFLGATVKPKLGLSGKNYGRVVYEGLRGGLDFLKDDENINSQPFMRWRERFLYCMEGINRAAASTGEVKGSYLNVTAGNMEDMYERAEYAKVIGSIIVMIDLVIGYTAIQSMGIWARKNDMILHLHRAGNSTYARQKNHGINFRVICKWMRMAGVDHIHAGTVVGKLEGDPLMVKGFYNTLLQTTLDINLPQGIFFEMDWALLRKTVPVASGGIHCGQMHQLTYYLGDDVVLQFGGGTIGHPDGIQAGATANRVALESMVLARNEGRDYLNEGPQILRDAAKMCGPLKTALDLWKDITFDYTSTDTPDFVETATESK 488
BLAST of mRNA_H-elongata_contig120842.1601.1 vs. uniprot
Match: A0A0H5BNA2_9PHAE (Ribulose bisphosphate carboxylase large chain (Fragment) n=3 Tax=Choristocarpus tenellus TaxID=116065 RepID=A0A0H5BNA2_9PHAE) HSP 1 Score: 892 bits (2305), Expect = 0.000e+0 Identity = 431/470 (91.70%), Postives = 457/470 (97.23%), Query Frame = 1
Query: 55 GVIPYAKMGYWDADYNVKDTDILALFRITPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPGTSDQFFAYVAYECDLFEEGSLANLTASIIGNVFGFKAVKALRLEDMRIPFAYLKTFQGPATGVIVERERLDKFGRPLLGATVKPKLGLSGKNYGRVVYEGLRGGLDFLKDDENINSQPFMRWKERFLYCMEGVNRAAAATGEVKGSYLNVTAATIEQMYERAEYAHAIGSVIVMVDLVIGYTAIQTMAIWARKAEMILHLHRAGNSTYARQKNHGINFRVICKWMRMCGVDHIHAGTVVGKLEGDPLMVRGFYNSLLLTQLKVNLAEGLFFDMDWASLRKCVPVASGGIHCGQMHQLLYYLGDDVVLQFGGGTIGHPDGIQAGATANRVALEAMVLARNEGRDYVGEGPEILRNAASTCGPLKAALDLWKDITFEYTSTDTPDFVEVATESK 1464
GVIPYAKMGYWDADYNVKDTDILALFRITPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVP T++QFFAYVAYECDLFEEGSLANLTASIIGNVFGFKA+ ALRLEDMRIPFAYLKTFQGPATG+IVERERLDKFGRPLLGATVKPKLGLSGKNYGRVVYEGLRGGLDFLKDDENINSQPFMRWKERFLYCMEGVNRAAA TGEVKGSYLNVTA T+E MYERA+YA IG+VI+M+DLVIGY+AIQ+MA++ARKA++ILHLHRAGNSTYARQKNHGINFRVICKWMRMCGVDHIHAGTVVGKLEGDPLMV+GFYN+LLLT L+++LA+G+FFDMDWASLRKCVPVASGGIHCGQMHQLLYYLGDDVVLQFGGGTIGHPDGIQAGATANRVALE+MVLARNEG DYV +GPEILRNAA CGPLKAALDLWKDITFEYTSTDTPDF+E ATE+K
Sbjct: 1 GVIPYAKMGYWDADYNVKDTDILALFRITPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPNTANQFFAYVAYECDLFEEGSLANLTASIIGNVFGFKAISALRLEDMRIPFAYLKTFQGPATGLIVERERLDKFGRPLLGATVKPKLGLSGKNYGRVVYEGLRGGLDFLKDDENINSQPFMRWKERFLYCMEGVNRAAAGTGEVKGSYLNVTAGTMENMYERADYAKQIGTVIIMIDLVIGYSAIQSMAVYARKAQLILHLHRAGNSTYARQKNHGINFRVICKWMRMCGVDHIHAGTVVGKLEGDPLMVKGFYNTLLLTSLEIDLAQGIFFDMDWASLRKCVPVASGGIHCGQMHQLLYYLGDDVVLQFGGGTIGHPDGIQAGATANRVALESMVLARNEGVDYVEQGPEILRNAARVCGPLKAALDLWKDITFEYTSTDTPDFIETATEAK 470
BLAST of mRNA_H-elongata_contig120842.1601.1 vs. uniprot
Match: RBL_OLILU (Ribulose bisphosphate carboxylase large chain n=38 Tax=root TaxID=1 RepID=RBL_OLILU) HSP 1 Score: 883 bits (2281), Expect = 0.000e+0 Identity = 424/487 (87.06%), Postives = 460/487 (94.46%), Query Frame = 1
Query: 1 MPENVQERTRIKSERYESGVIPYAKMGYWDADYNVKDTDILALFRITPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPGTSDQFFAYVAYECDLFEEGSLANLTASIIGNVFGFKAVKALRLEDMRIPFAYLKTFQGPATGVIVERERLDKFGRPLLGATVKPKLGLSGKNYGRVVYEGLRGGLDFLKDDENINSQPFMRWKERFLYCMEGVNRAAAATGEVKGSYLNVTAATIEQMYERAEYAHAIGSVIVMVDLVIGYTAIQTMAIWARKAEMILHLHRAGNSTYARQKNHGINFRVICKWMRMCGVDHIHAGTVVGKLEGDPLMVRGFYNSLLLTQLKVNLAEGLFFDMDWASLRKCVPVASGGIHCGQMHQLLYYLGDDVVLQFGGGTIGHPDGIQAGATANRVALEAMVLARNEGRDYVGEGPEILRNAASTCGPLKAALDLWKDITFEYTSTDTPDFVEVATES 1461
M NV ER RIK++RYESGVIPYAKMGYWDA+Y+VKDTD+LALFR+TPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACD+YRAKAYRVDPVP +DQ+FAY+AYECDLFEEGSLAN+TASIIGNVFGFKAV ALRLEDMRIP+AYLKTFQGPATG+IVERERLD FGRPLLGATVKPKLGLSGKNYGRVVYEGLRGG+DFLKDDENINSQPFMRW+ERFLYCMEG+NRA+AA+GEVKGSYLNVTAAT+E+MYERA+YA A+GSVIVM+DLVIGYTAIQ+MAIWARK +MILHLHRAGNSTYARQKNHGINFRVICKWMRM GVDHIHAGTVVGKLEGDPLMV+GFY+ L T+L +NL +G+FF+MDWASLRKC PVASGGIHCGQMHQL+YYLGDDVVLQFGGGTIGHPDGIQAGATANRVALEAM+LARNEGRDYV EGPEILR+ A CGPLK ALDLWK ITF YTSTDT DFVE AT +
Sbjct: 1 MSNNVYERNRIKNDRYESGVIPYAKMGYWDANYSVKDTDLLALFRLTPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDVYRAKAYRVDPVPSAADQYFAYIAYECDLFEEGSLANMTASIIGNVFGFKAVAALRLEDMRIPYAYLKTFQGPATGIIVERERLDTFGRPLLGATVKPKLGLSGKNYGRVVYEGLRGGIDFLKDDENINSQPFMRWRERFLYCMEGINRASAASGEVKGSYLNVTAATMEEMYERADYAKAVGSVIVMIDLVIGYTAIQSMAIWARKNDMILHLHRAGNSTYARQKNHGINFRVICKWMRMAGVDHIHAGTVVGKLEGDPLMVKGFYDVLRETELSINLPQGIFFEMDWASLRKCCPVASGGIHCGQMHQLVYYLGDDVVLQFGGGTIGHPDGIQAGATANRVALEAMILARNEGRDYVSEGPEILRDIAKLCGPLKTALDLWKGITFNYTSTDTADFVETATSN 487
BLAST of mRNA_H-elongata_contig120842.1601.1 vs. uniprot
Match: A0A7U0QG21_OLILU (Ribulose bisphosphate carboxylase large chain n=2 Tax=Olisthodiscus luteus TaxID=83000 RepID=A0A7U0QG21_OLILU) HSP 1 Score: 880 bits (2275), Expect = 0.000e+0 Identity = 422/482 (87.55%), Postives = 460/482 (95.44%), Query Frame = 1
Query: 10 NVQERTRIKSERYESGVIPYAKMGYWDADYNVKDTDILALFRITPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPGTSDQFFAYVAYECDLFEEGSLANLTASIIGNVFGFKAVKALRLEDMRIPFAYLKTFQGPATGVIVERERLDKFGRPLLGATVKPKLGLSGKNYGRVVYEGLRGGLDFLKDDENINSQPFMRWKERFLYCMEGVNRAAAATGEVKGSYLNVTAATIEQMYERAEYAHAIGSVIVMVDLVIGYTAIQTMAIWARKAEMILHLHRAGNSTYARQKNHGINFRVICKWMRMCGVDHIHAGTVVGKLEGDPLMVRGFYNSLLLTQLKVNLAEGLFFDMDWASLRKCVPVASGGIHCGQMHQLLYYLGDDVVLQFGGGTIGHPDGIQAGATANRVALEAMVLARNEGRDYVGEGPEILRNAASTCGPLKAALDLWKDITFEYTSTDTPDFVEVAT 1455
+V ERTRIK+ERYESGVIPYAKMGYWD +Y++K+TD+LALFRITPQPGVDP+EAAAAVAGESSTATWTVVWTDLLTACD+YRAKAYRVDPVP ++DQ+FAY+AYECDLFEEGS+ANLTASIIGNVFGFKAV+ALRLEDMRIP AYLKTFQGPATGV+VERERLDKFGRPLLGATVKPKLGLSGKNYGRVVYEGL+GGLDFLKDDENINSQPFMRW+ERFLY MEG+NRAAA +GEVKGSYLN TAAT+E MYERAEYA A+GSVI+M+DLVIGY+AIQ+MAIW+R +MILHLHRAGNSTYARQKNHGINFRVICKWMRM GVDHIHAGTVVGKLEGDPLMV+GFY SLL T+L+VNL +GLFFDMDWA+LRKC+PVASGGIHCGQMHQL+YYLGDDVVLQFGGGTIGHPDGIQAGATANRVALEAMVLARNEGRDYV EGP+ILR AASTC PL+ ALDLWKDI+F YTSTDT DFVE AT
Sbjct: 2 SVSERTRIKNERYESGVIPYAKMGYWDGNYSIKETDVLALFRITPQPGVDPIEAAAAVAGESSTATWTVVWTDLLTACDVYRAKAYRVDPVPNSTDQYFAYIAYECDLFEEGSIANLTASIIGNVFGFKAVQALRLEDMRIPIAYLKTFQGPATGVVVERERLDKFGRPLLGATVKPKLGLSGKNYGRVVYEGLKGGLDFLKDDENINSQPFMRWRERFLYVMEGINRAAAGSGEVKGSYLNCTAATMEDMYERAEYARAVGSVIIMIDLVIGYSAIQSMAIWSRNNDMILHLHRAGNSTYARQKNHGINFRVICKWMRMAGVDHIHAGTVVGKLEGDPLMVQGFYASLLATELQVNLPQGLFFDMDWAALRKCMPVASGGIHCGQMHQLIYYLGDDVVLQFGGGTIGHPDGIQAGATANRVALEAMVLARNEGRDYVAEGPQILRTAASTCAPLQTALDLWKDISFNYTSTDTADFVETAT 483
BLAST of mRNA_H-elongata_contig120842.1601.1 vs. uniprot
Match: A2A0V7_9PHAE (Ribulose bisphosphate carboxylase large chain (Fragment) n=6 Tax=Phaeophyceae TaxID=2870 RepID=A2A0V7_9PHAE) HSP 1 Score: 877 bits (2265), Expect = 0.000e+0 Identity = 420/462 (90.91%), Postives = 452/462 (97.84%), Query Frame = 1
Query: 61 IPYAKMGYWDADYNVKDTDILALFRITPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPGTSDQFFAYVAYECDLFEEGSLANLTASIIGNVFGFKAVKALRLEDMRIPFAYLKTFQGPATGVIVERERLDKFGRPLLGATVKPKLGLSGKNYGRVVYEGLRGGLDFLKDDENINSQPFMRWKERFLYCMEGVNRAAAATGEVKGSYLNVTAATIEQMYERAEYAHAIGSVIVMVDLVIGYTAIQTMAIWARKAEMILHLHRAGNSTYARQKNHGINFRVICKWMRMCGVDHIHAGTVVGKLEGDPLMVRGFYNSLLLTQLKVNLAEGLFFDMDWASLRKCVPVASGGIHCGQMHQLLYYLGDDVVLQFGGGTIGHPDGIQAGATANRVALEAMVLARNEGRDYVGEGPEILRNAASTCGPLKAALDLWKDITFEYTSTDTPDFVE 1446
IPYAKMGYWDADY+VK+TD+L+LFRITPQPGVDP+EAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVP T+DQFFAY+AY+ DLFEEGSLANLTASIIGNVFGFKAVKALRLEDMR+P AYLKT+QGPATGVIVERERLD FGRPLLGATVKPKLGLSGKNYGRVVYEGLRGGLDFLKDDENINSQPFMRWKER+LYCMEGVNRAAAATGEVKG+YLN+T+ATIE MYERAEYA AIG+VIVM+DLVIGYTAIQTMAIWARKA+MILHLHRAGNSTYARQKNHGINFRVICKWMRM GVDHIHAGTVVGKLEGDPLMV+GFYN+LLLT+L+++LA+G+FFDMDWASLRKC+PVASGGIHCGQMHQL+YYLGDDVVLQFGGGTIGHPDGIQAGATANRVALE+M+LARNEGR+YV EGPEILR+AA TCGPLK ALDLWKDITFEYTSTDTPDF+E
Sbjct: 1 IPYAKMGYWDADYSVKETDVLSLFRITPQPGVDPIEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPNTTDQFFAYIAYDIDLFEEGSLANLTASIIGNVFGFKAVKALRLEDMRLPIAYLKTYQGPATGVIVERERLDTFGRPLLGATVKPKLGLSGKNYGRVVYEGLRGGLDFLKDDENINSQPFMRWKERYLYCMEGVNRAAAATGEVKGTYLNITSATIEHMYERAEYARAIGTVIVMIDLVIGYTAIQTMAIWARKAQMILHLHRAGNSTYARQKNHGINFRVICKWMRMAGVDHIHAGTVVGKLEGDPLMVKGFYNTLLLTELEIDLAQGIFFDMDWASLRKCLPVASGGIHCGQMHQLVYYLGDDVVLQFGGGTIGHPDGIQAGATANRVALESMILARNEGREYVPEGPEILRDAAKTCGPLKTALDLWKDITFEYTSTDTPDFLE 462
BLAST of mRNA_H-elongata_contig120842.1601.1 vs. uniprot
Match: Q70HW0_9STRA (Ribulose bisphosphate carboxylase large chain (Fragment) n=6 Tax=root TaxID=1 RepID=Q70HW0_9STRA) HSP 1 Score: 868 bits (2242), Expect = 0.000e+0 Identity = 422/457 (92.34%), Postives = 443/457 (96.94%), Query Frame = 1
Query: 49 ESGVIPYAKMGYWDADYNVKDTDILALFRITPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPGTSDQFFAYVAYECDLFEEGSLANLTASIIGNVFGFKAVKALRLEDMRIPFAYLKTFQGPATGVIVERERLDKFGRPLLGATVKPKLGLSGKNYGRVVYEGLRGGLDFLKDDENINSQPFMRWKERFLYCMEGVNRAAAATGEVKGSYLNVTAATIEQMYERAEYAHAIGSVIVMVDLVIGYTAIQTMAIWARKAEMILHLHRAGNSTYARQKNHGINFRVICKWMRMCGVDHIHAGTVVGKLEGDPLMVRGFYNSLLLTQLKVNLAEGLFFDMDWASLRKCVPVASGGIHCGQMHQLLYYLGDDVVLQFGGGTIGHPDGIQAGATANRVALEAMVLARNEGRDYVGEGPEILRNAASTCGPLKAALDLWKDITFEYT 1419
ESGVIPYAKMGYWDADYNVK TDILALFRITPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPGT+DQFFAY+AYEC+LFEEGSLANLTASIIGNVFGFKAVKALRLEDMRIPF+YLKTFQGPATG+IVERER+DKFGRPLLGATVKPKLGLSGKNYGRVVYEGLRGGLDFLKDDENINSQPFMRW+ERFLYCMEGVNRA+AATGEVKGSYLN TAATIE+MYERA YA IGS+I+MVDLVIGYTAIQTMAIWARK +MILHLHRAGNSTYARQKNHGINFRVICKWMRM GVDHIHAGTVVGKLEGDPLMV+GFYN+LL T+L +NL +GLFFDMDWASLRK VPVASGGIHCGQMHQLLYYLGDDVVLQFGGGTIGHPDGIQAGATANRVALEAMVLARNEGRDY+ EGP+ILR+AA TCGPLK ALDLWKDITF+YT
Sbjct: 1 ESGVIPYAKMGYWDADYNVKHTDILALFRITPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPGTTDQFFAYIAYECELFEEGSLANLTASIIGNVFGFKAVKALRLEDMRIPFSYLKTFQGPATGLIVERERMDKFGRPLLGATVKPKLGLSGKNYGRVVYEGLRGGLDFLKDDENINSQPFMRWRERFLYCMEGVNRASAATGEVKGSYLNTTAATIEEMYERALYAKEIGSIIIMVDLVIGYTAIQTMAIWARKHDMILHLHRAGNSTYARQKNHGINFRVICKWMRMSGVDHIHAGTVVGKLEGDPLMVKGFYNTLLETKLSINLPQGLFFDMDWASLRKTVPVASGGIHCGQMHQLLYYLGDDVVLQFGGGTIGHPDGIQAGATANRVALEAMVLARNEGRDYLNEGPQILRDAAKTCGPLKTALDLWKDITFDYT 457
BLAST of mRNA_H-elongata_contig120842.1601.1 vs. uniprot
Match: A0A3R5QND5_9STRA (Ribulose bisphosphate carboxylase large chain n=93 Tax=Eukaryota TaxID=2759 RepID=A0A3R5QND5_9STRA) HSP 1 Score: 862 bits (2228), Expect = 2.660e-314 Identity = 416/486 (85.60%), Postives = 456/486 (93.83%), Query Frame = 1
Query: 1 MPENVQERTRIKSERYESGVIPYAKMGYWDADYNVKDTDILALFRITPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPGTSDQFFAYVAYECDLFEEGSLANLTASIIGNVFGFKAVKALRLEDMRIPFAYLKTFQGPATGVIVERERLDKFGRPLLGATVKPKLGLSGKNYGRVVYEGLRGGLDFLKDDENINSQPFMRWKERFLYCMEGVNRAAAATGEVKGSYLNVTAATIEQMYERAEYAHAIGSVIVMVDLVIGYTAIQTMAIWARKAEMILHLHRAGNSTYARQKNHGINFRVICKWMRMCGVDHIHAGTVVGKLEGDPLMVRGFYNSLLLTQLKVNLAEGLFFDMDWASLRKCVPVASGGIHCGQMHQLLYYLGDDVVLQFGGGTIGHPDGIQAGATANRVALEAMVLARNEGRDYVGEGPEILRNAASTCGPLKAALDLWKDITFEYTSTDTPDFVEVATE 1458
M ++V+ERTRIK+ERYESGVIPYA+MGYWDA Y VKDTD+LALFRITPQPGVDP+EAAAAVAGESSTATWTVVWTDLLTACDIYRAKAY+VDPVPG +DQ+F Y+AYECDLFEEGSLANLTASIIGNVFGFKAVKALRLEDMRIP+AYLKTFQGPATGV+VERERLDKFGRPLLGATVKPKLGLSGKNYGRVV+EGLRGGLDFLKDDENINSQPFMRW+ERF Y MEGVNR+AAA+GEVKGSYLNVTA T+E MYERAE+A IGSVI+M+DLVIGYTAIQ+MA+WAR+ +MILHLHRAGNSTYARQKNHGINFRVICKWMRM GVDHIHAGTVVGKLEGDPLMV+GFYN LLLT L+VNL +G+FFDMDWASLRK +PVASGGIHCGQMHQLL+YLG+D VLQFGGGTIGHPDGI +GATANRVALE+M+LARNEGRDY+ EGP+ILR AA C PL+ ALDLWKDI F Y+STDT DFVE T+
Sbjct: 1 MFQSVEERTRIKNERYESGVIPYAEMGYWDAAYTVKDTDVLALFRITPQPGVDPIEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYKVDPVPGAADQYFGYIAYECDLFEEGSLANLTASIIGNVFGFKAVKALRLEDMRIPYAYLKTFQGPATGVVVERERLDKFGRPLLGATVKPKLGLSGKNYGRVVFEGLRGGLDFLKDDENINSQPFMRWRERFAYVMEGVNRSAAASGEVKGSYLNVTAGTMENMYERAEFAKLIGSVIIMIDLVIGYTAIQSMAVWARQNDMILHLHRAGNSTYARQKNHGINFRVICKWMRMAGVDHIHAGTVVGKLEGDPLMVKGFYNVLLLTDLEVNLPQGIFFDMDWASLRKVLPVASGGIHCGQMHQLLHYLGEDCVLQFGGGTIGHPDGIASGATANRVALESMLLARNEGRDYLKEGPKILRTAAEQCTPLRVALDLWKDIAFNYSSTDTADFVETTTK 486 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig120842.1601.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig120842.1601.1 >prot_H-elongata_contig120842.1601.1 ID=prot_H-elongata_contig120842.1601.1|Name=mRNA_H-elongata_contig120842.1601.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=489bp MPENVQERTRIKSERYESGVIPYAKMGYWDADYNVKDTDILALFRITPQPback to top mRNA from alignment at H-elongata_contig120842:119..1585+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig120842.1601.1 ID=mRNA_H-elongata_contig120842.1601.1|Name=mRNA_H-elongata_contig120842.1601.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1467bp|location=Sequence derived from alignment at H-elongata_contig120842:119..1585+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig120842:119..1585+ >mRNA_H-elongata_contig120842.1601.1 ID=mRNA_H-elongata_contig120842.1601.1|Name=mRNA_H-elongata_contig120842.1601.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2934bp|location=Sequence derived from alignment at H-elongata_contig120842:119..1585+ (Himanthalia elongata Himel1 dioecious)back to top |