prot_H-elongata_contig120842.1601.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig120842.1601.1
Unique Nameprot_H-elongata_contig120842.1601.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length489
Homology
BLAST of mRNA_H-elongata_contig120842.1601.1 vs. uniprot
Match: RBL_ECTSI (Ribulose bisphosphate carboxylase large chain n=2255 Tax=PX clade TaxID=569578 RepID=RBL_ECTSI)

HSP 1 Score: 952 bits (2461), Expect = 0.000e+0
Identity = 464/488 (95.08%), Postives = 481/488 (98.57%), Query Frame = 0
Query:    1 MPENVQERTRIKSERYESGVIPYAKMGYWDADYNVKDTDILALFRITPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPGTSDQFFAYVAYECDLFEEGSLANLTASIIGNVFGFKAVKALRLEDMRIPFAYLKTFQGPATGVIVERERLDKFGRPLLGATVKPKLGLSGKNYGRVVYEGLRGGLDFLKDDENINSQPFMRWKERFLYCMEGVNRAAAATGEVKGSYLNVTAATIEQMYERAEYAHAIGSVIVMVDLVIGYTAIQTMAIWARKAEMILHLHRAGNSTYARQKNHGINFRVICKWMRMCGVDHIHAGTVVGKLEGDPLMVRGFYNSLLLTQLKVNLAEGLFFDMDWASLRKCVPVASGGIHCGQMHQLLYYLGDDVVLQFGGGTIGHPDGIQAGATANRVALEAMVLARNEGRDYVGEGPEILRNAASTCGPLKAALDLWKDITFEYTSTDTPDFVEVATESK 488
            MPE+VQ RTRIKSERYESGVIPYAKMGYWDADY +KDTDILALFRITPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPGTSDQFFAY+AYECDLFEEGSLANLTASIIGNVFGFKAVKALRLEDMRIP+AYLKTFQGPATGV+VERERLDKFGRP LGATVKPKLGLSGKNYGRVVYEGL GGLDFLKDDENINSQPFMRWKERFLYCMEGVNRAAAATGEVKGSYLN+TAAT+EQMYERAEYAHAIGSVIVM+DLVIGYTAIQ+MAIWARKAE+ILHLHRAGNSTYARQKNHGINFRVICKWMRMCGVDHIHAGTVVGKLEGDPLMV+GFYNSLLLT LK+NLAEGLFFDMDWASLRKCVPVASGGIHCGQMHQLLYYLGDDVVLQFGGGTIGHPDGIQ+GATANRVALE+MVLARNEGRDYVGEGP+ILR AASTCGPLKAALDLWKDITF+YTSTDTPDFVEVAT S+
Sbjct:    1 MPEDVQNRTRIKSERYESGVIPYAKMGYWDADYKLKDTDILALFRITPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPGTSDQFFAYIAYECDLFEEGSLANLTASIIGNVFGFKAVKALRLEDMRIPYAYLKTFQGPATGVVVERERLDKFGRPFLGATVKPKLGLSGKNYGRVVYEGLTGGLDFLKDDENINSQPFMRWKERFLYCMEGVNRAAAATGEVKGSYLNITAATVEQMYERAEYAHAIGSVIVMIDLVIGYTAIQSMAIWARKAEVILHLHRAGNSTYARQKNHGINFRVICKWMRMCGVDHIHAGTVVGKLEGDPLMVKGFYNSLLLTHLKINLAEGLFFDMDWASLRKCVPVASGGIHCGQMHQLLYYLGDDVVLQFGGGTIGHPDGIQSGATANRVALESMVLARNEGRDYVGEGPDILRRAASTCGPLKAALDLWKDITFDYTSTDTPDFVEVATGSR 488          
BLAST of mRNA_H-elongata_contig120842.1601.1 vs. uniprot
Match: A0A858LFZ1_9STRA (Ribulose bisphosphate carboxylase large chain n=9 Tax=Ochrophyta TaxID=2696291 RepID=A0A858LFZ1_9STRA)

HSP 1 Score: 922 bits (2384), Expect = 0.000e+0
Identity = 450/488 (92.21%), Postives = 474/488 (97.13%), Query Frame = 0
Query:    1 MPENVQERTRIKSERYESGVIPYAKMGYWDADYNVKDTDILALFRITPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPGTSDQFFAYVAYECDLFEEGSLANLTASIIGNVFGFKAVKALRLEDMRIPFAYLKTFQGPATGVIVERERLDKFGRPLLGATVKPKLGLSGKNYGRVVYEGLRGGLDFLKDDENINSQPFMRWKERFLYCMEGVNRAAAATGEVKGSYLNVTAATIEQMYERAEYAHAIGSVIVMVDLVIGYTAIQTMAIWARKAEMILHLHRAGNSTYARQKNHGINFRVICKWMRMCGVDHIHAGTVVGKLEGDPLMVRGFYNSLLLTQLKVNLAEGLFFDMDWASLRKCVPVASGGIHCGQMHQLLYYLGDDVVLQFGGGTIGHPDGIQAGATANRVALEAMVLARNEGRDYVGEGPEILRNAASTCGPLKAALDLWKDITFEYTSTDTPDFVEVATESK 488
            M +NVQERTRIKSERYESGVIPYAKMGYWDADYN+K TDILALFRITPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPGT+DQFFAY+AYEC+LFEEGSLANLTASIIGNVFGFKAVKALRLEDMRIPF+YLKTFQGPATG+IVERER+DKFGRPLLGATVKPKLGLSGKNYGRVVYEGLRGGLDFLKDDENINSQPFMRW+ERFLYCMEGVNRA+AATGEVKGSYLN TAATIE+MYERA YA  IGS+I+MVDLVIGYTAIQTMAIWARK +MILHLHRAGNSTYARQKNHGINFRVICKWMRM GVDHIHAGTVVGKLEGDPLMV+GFYN+LL T+L +NL++GLFFDMDWASLRK VPVASGGIHCGQMHQLLYYLGDDVVLQFGGGTIGHPDGIQAGATANRVALEAMVLARNEGRDY+ EGP+ILR+AA TCGPLK ALDLWKDITF+YTSTDTPDFVEVATESK
Sbjct:    1 MSKNVQERTRIKSERYESGVIPYAKMGYWDADYNIKHTDILALFRITPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPGTTDQFFAYIAYECELFEEGSLANLTASIIGNVFGFKAVKALRLEDMRIPFSYLKTFQGPATGLIVERERMDKFGRPLLGATVKPKLGLSGKNYGRVVYEGLRGGLDFLKDDENINSQPFMRWRERFLYCMEGVNRASAATGEVKGSYLNTTAATIEEMYERALYAKEIGSIIIMVDLVIGYTAIQTMAIWARKHDMILHLHRAGNSTYARQKNHGINFRVICKWMRMSGVDHIHAGTVVGKLEGDPLMVKGFYNTLLETKLSINLSQGLFFDMDWASLRKVVPVASGGIHCGQMHQLLYYLGDDVVLQFGGGTIGHPDGIQAGATANRVALEAMVLARNEGRDYLNEGPQILRDAAKTCGPLKTALDLWKDITFDYTSTDTPDFVEVATESK 488          
BLAST of mRNA_H-elongata_contig120842.1601.1 vs. uniprot
Match: Q8HSH1_9STRA (Ribulose bisphosphate carboxylase large chain n=106 Tax=root TaxID=1 RepID=Q8HSH1_9STRA)

HSP 1 Score: 905 bits (2338), Expect = 0.000e+0
Identity = 435/488 (89.14%), Postives = 472/488 (96.72%), Query Frame = 0
Query:    1 MPENVQERTRIKSERYESGVIPYAKMGYWDADYNVKDTDILALFRITPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPGTSDQFFAYVAYECDLFEEGSLANLTASIIGNVFGFKAVKALRLEDMRIPFAYLKTFQGPATGVIVERERLDKFGRPLLGATVKPKLGLSGKNYGRVVYEGLRGGLDFLKDDENINSQPFMRWKERFLYCMEGVNRAAAATGEVKGSYLNVTAATIEQMYERAEYAHAIGSVIVMVDLVIGYTAIQTMAIWARKAEMILHLHRAGNSTYARQKNHGINFRVICKWMRMCGVDHIHAGTVVGKLEGDPLMVRGFYNSLLLTQLKVNLAEGLFFDMDWASLRKCVPVASGGIHCGQMHQLLYYLGDDVVLQFGGGTIGHPDGIQAGATANRVALEAMVLARNEGRDYVGEGPEILRNAASTCGPLKAALDLWKDITFEYTSTDTPDFVEVATESK 488
            M ++VQERTRIKS+RYESGVIPYAKMGYWDA YNVK TDILALFRITPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPGT+DQ+FAY++Y+C+LFEEGSLANLTASIIGNVFGFKAVKALRLEDMRIPFAYLKTFQGPATG++VERER+DKFGRP LGATVKPKLGLSGKNYGRVVYEGLRGGLDFLKDDENINSQPFMRW+ERFLYCMEGVNRAAAATGE+KGSYLN TA T+E+MYERAEYA  +G++IVM+DLV+GYTAIQ+MAIWARKA+MILHLHRAGNSTYARQKNHGINFRVICKWMRM GVDHIHAGTVVGKLEGDPLMV+GFYN+LL T+L +NL +GLFF+M+WA+LRK VPVASGGIHCGQMHQLLYYLGDDVVLQFGGGTIGHPDGIQAGATANRVALEAMVLARNEGRDY+ EGP+ILR+AA TCGPLK ALDLWKDITF+YTSTDTPDFVE+AT+SK
Sbjct:    1 MSKSVQERTRIKSQRYESGVIPYAKMGYWDAFYNVKHTDILALFRITPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPGTTDQYFAYISYQCELFEEGSLANLTASIIGNVFGFKAVKALRLEDMRIPFAYLKTFQGPATGLVVERERMDKFGRPFLGATVKPKLGLSGKNYGRVVYEGLRGGLDFLKDDENINSQPFMRWRERFLYCMEGVNRAAAATGEIKGSYLNTTAGTMEEMYERAEYAKQLGTIIVMIDLVVGYTAIQSMAIWARKADMILHLHRAGNSTYARQKNHGINFRVICKWMRMAGVDHIHAGTVVGKLEGDPLMVKGFYNTLLETKLDINLPQGLFFEMEWAALRKTVPVASGGIHCGQMHQLLYYLGDDVVLQFGGGTIGHPDGIQAGATANRVALEAMVLARNEGRDYLNEGPQILRDAAKTCGPLKTALDLWKDITFDYTSTDTPDFVEIATKSK 488          
BLAST of mRNA_H-elongata_contig120842.1601.1 vs. uniprot
Match: B8LGQ9_9STRA (Ribulose bisphosphate carboxylase large chain n=186 Tax=root TaxID=1 RepID=B8LGQ9_9STRA)

HSP 1 Score: 902 bits (2330), Expect = 0.000e+0
Identity = 436/488 (89.34%), Postives = 464/488 (95.08%), Query Frame = 0
Query:    1 MPENVQERTRIKSERYESGVIPYAKMGYWDADYNVKDTDILALFRITPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPGTSDQFFAYVAYECDLFEEGSLANLTASIIGNVFGFKAVKALRLEDMRIPFAYLKTFQGPATGVIVERERLDKFGRPLLGATVKPKLGLSGKNYGRVVYEGLRGGLDFLKDDENINSQPFMRWKERFLYCMEGVNRAAAATGEVKGSYLNVTAATIEQMYERAEYAHAIGSVIVMVDLVIGYTAIQTMAIWARKAEMILHLHRAGNSTYARQKNHGINFRVICKWMRMCGVDHIHAGTVVGKLEGDPLMVRGFYNSLLLTQLKVNLAEGLFFDMDWASLRKCVPVASGGIHCGQMHQLLYYLGDDVVLQFGGGTIGHPDGIQAGATANRVALEAMVLARNEGRDYVGEGPEILRNAASTCGPLKAALDLWKDITFEYTSTDTPDFVEVATESK 488
            M +NVQERTRIKSERYESGVIPYAKMGYWDADYN+  TDILALFRITPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPGT+DQFFAY+AY+C+LFEEGSLANLTASIIGNVFGFKAVKALRLEDMRIPFAYLKTFQGPATG++VERER+DKFGRP LGATVKPKLGLSGKNYGRVVYEGLRGGLDFLKDDENINSQPFMRW+ERFLYCMEG+NRAAA+TGEVKGSYLNVTA  +E MYERAEYA  IGS+IVM+DLVIGYTAIQ+M IWARK +MILHLHRAGNSTYARQKNHGINFRVICKWMRM GVDHIHAGTVVGKLEGDPLMV+GFYN+LL T L +NL +G+FF+MDWA LRK VPVASGGIHCGQMHQL YYLGDDVVLQFGGGTIGHPDGIQAGATANRVALE+MVLARNEGRDY+ EGP+ILR+AA  CGPLK ALDLWKDITF+YTSTDTPDFVE ATESK
Sbjct:    1 MSKNVQERTRIKSERYESGVIPYAKMGYWDADYNIAHTDILALFRITPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPGTTDQFFAYIAYQCELFEEGSLANLTASIIGNVFGFKAVKALRLEDMRIPFAYLKTFQGPATGLVVERERMDKFGRPFLGATVKPKLGLSGKNYGRVVYEGLRGGLDFLKDDENINSQPFMRWRERFLYCMEGINRAAASTGEVKGSYLNVTAGNMEDMYERAEYAKVIGSIIVMIDLVIGYTAIQSMGIWARKNDMILHLHRAGNSTYARQKNHGINFRVICKWMRMAGVDHIHAGTVVGKLEGDPLMVKGFYNTLLQTTLDINLPQGIFFEMDWALLRKTVPVASGGIHCGQMHQLTYYLGDDVVLQFGGGTIGHPDGIQAGATANRVALESMVLARNEGRDYLNEGPQILRDAAKMCGPLKTALDLWKDITFDYTSTDTPDFVETATESK 488          
BLAST of mRNA_H-elongata_contig120842.1601.1 vs. uniprot
Match: A0A0H5BNA2_9PHAE (Ribulose bisphosphate carboxylase large chain (Fragment) n=3 Tax=Choristocarpus tenellus TaxID=116065 RepID=A0A0H5BNA2_9PHAE)

HSP 1 Score: 892 bits (2305), Expect = 0.000e+0
Identity = 431/470 (91.70%), Postives = 457/470 (97.23%), Query Frame = 0
Query:   19 GVIPYAKMGYWDADYNVKDTDILALFRITPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPGTSDQFFAYVAYECDLFEEGSLANLTASIIGNVFGFKAVKALRLEDMRIPFAYLKTFQGPATGVIVERERLDKFGRPLLGATVKPKLGLSGKNYGRVVYEGLRGGLDFLKDDENINSQPFMRWKERFLYCMEGVNRAAAATGEVKGSYLNVTAATIEQMYERAEYAHAIGSVIVMVDLVIGYTAIQTMAIWARKAEMILHLHRAGNSTYARQKNHGINFRVICKWMRMCGVDHIHAGTVVGKLEGDPLMVRGFYNSLLLTQLKVNLAEGLFFDMDWASLRKCVPVASGGIHCGQMHQLLYYLGDDVVLQFGGGTIGHPDGIQAGATANRVALEAMVLARNEGRDYVGEGPEILRNAASTCGPLKAALDLWKDITFEYTSTDTPDFVEVATESK 488
            GVIPYAKMGYWDADYNVKDTDILALFRITPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVP T++QFFAYVAYECDLFEEGSLANLTASIIGNVFGFKA+ ALRLEDMRIPFAYLKTFQGPATG+IVERERLDKFGRPLLGATVKPKLGLSGKNYGRVVYEGLRGGLDFLKDDENINSQPFMRWKERFLYCMEGVNRAAA TGEVKGSYLNVTA T+E MYERA+YA  IG+VI+M+DLVIGY+AIQ+MA++ARKA++ILHLHRAGNSTYARQKNHGINFRVICKWMRMCGVDHIHAGTVVGKLEGDPLMV+GFYN+LLLT L+++LA+G+FFDMDWASLRKCVPVASGGIHCGQMHQLLYYLGDDVVLQFGGGTIGHPDGIQAGATANRVALE+MVLARNEG DYV +GPEILRNAA  CGPLKAALDLWKDITFEYTSTDTPDF+E ATE+K
Sbjct:    1 GVIPYAKMGYWDADYNVKDTDILALFRITPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPNTANQFFAYVAYECDLFEEGSLANLTASIIGNVFGFKAISALRLEDMRIPFAYLKTFQGPATGLIVERERLDKFGRPLLGATVKPKLGLSGKNYGRVVYEGLRGGLDFLKDDENINSQPFMRWKERFLYCMEGVNRAAAGTGEVKGSYLNVTAGTMENMYERADYAKQIGTVIIMIDLVIGYSAIQSMAVYARKAQLILHLHRAGNSTYARQKNHGINFRVICKWMRMCGVDHIHAGTVVGKLEGDPLMVKGFYNTLLLTSLEIDLAQGIFFDMDWASLRKCVPVASGGIHCGQMHQLLYYLGDDVVLQFGGGTIGHPDGIQAGATANRVALESMVLARNEGVDYVEQGPEILRNAARVCGPLKAALDLWKDITFEYTSTDTPDFIETATEAK 470          
BLAST of mRNA_H-elongata_contig120842.1601.1 vs. uniprot
Match: RBL_OLILU (Ribulose bisphosphate carboxylase large chain n=38 Tax=root TaxID=1 RepID=RBL_OLILU)

HSP 1 Score: 883 bits (2281), Expect = 0.000e+0
Identity = 424/487 (87.06%), Postives = 460/487 (94.46%), Query Frame = 0
Query:    1 MPENVQERTRIKSERYESGVIPYAKMGYWDADYNVKDTDILALFRITPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPGTSDQFFAYVAYECDLFEEGSLANLTASIIGNVFGFKAVKALRLEDMRIPFAYLKTFQGPATGVIVERERLDKFGRPLLGATVKPKLGLSGKNYGRVVYEGLRGGLDFLKDDENINSQPFMRWKERFLYCMEGVNRAAAATGEVKGSYLNVTAATIEQMYERAEYAHAIGSVIVMVDLVIGYTAIQTMAIWARKAEMILHLHRAGNSTYARQKNHGINFRVICKWMRMCGVDHIHAGTVVGKLEGDPLMVRGFYNSLLLTQLKVNLAEGLFFDMDWASLRKCVPVASGGIHCGQMHQLLYYLGDDVVLQFGGGTIGHPDGIQAGATANRVALEAMVLARNEGRDYVGEGPEILRNAASTCGPLKAALDLWKDITFEYTSTDTPDFVEVATES 487
            M  NV ER RIK++RYESGVIPYAKMGYWDA+Y+VKDTD+LALFR+TPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACD+YRAKAYRVDPVP  +DQ+FAY+AYECDLFEEGSLAN+TASIIGNVFGFKAV ALRLEDMRIP+AYLKTFQGPATG+IVERERLD FGRPLLGATVKPKLGLSGKNYGRVVYEGLRGG+DFLKDDENINSQPFMRW+ERFLYCMEG+NRA+AA+GEVKGSYLNVTAAT+E+MYERA+YA A+GSVIVM+DLVIGYTAIQ+MAIWARK +MILHLHRAGNSTYARQKNHGINFRVICKWMRM GVDHIHAGTVVGKLEGDPLMV+GFY+ L  T+L +NL +G+FF+MDWASLRKC PVASGGIHCGQMHQL+YYLGDDVVLQFGGGTIGHPDGIQAGATANRVALEAM+LARNEGRDYV EGPEILR+ A  CGPLK ALDLWK ITF YTSTDT DFVE AT +
Sbjct:    1 MSNNVYERNRIKNDRYESGVIPYAKMGYWDANYSVKDTDLLALFRLTPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDVYRAKAYRVDPVPSAADQYFAYIAYECDLFEEGSLANMTASIIGNVFGFKAVAALRLEDMRIPYAYLKTFQGPATGIIVERERLDTFGRPLLGATVKPKLGLSGKNYGRVVYEGLRGGIDFLKDDENINSQPFMRWRERFLYCMEGINRASAASGEVKGSYLNVTAATMEEMYERADYAKAVGSVIVMIDLVIGYTAIQSMAIWARKNDMILHLHRAGNSTYARQKNHGINFRVICKWMRMAGVDHIHAGTVVGKLEGDPLMVKGFYDVLRETELSINLPQGIFFEMDWASLRKCCPVASGGIHCGQMHQLVYYLGDDVVLQFGGGTIGHPDGIQAGATANRVALEAMILARNEGRDYVSEGPEILRDIAKLCGPLKTALDLWKGITFNYTSTDTADFVETATSN 487          
BLAST of mRNA_H-elongata_contig120842.1601.1 vs. uniprot
Match: A0A7U0QG21_OLILU (Ribulose bisphosphate carboxylase large chain n=2 Tax=Olisthodiscus luteus TaxID=83000 RepID=A0A7U0QG21_OLILU)

HSP 1 Score: 880 bits (2275), Expect = 0.000e+0
Identity = 422/482 (87.55%), Postives = 460/482 (95.44%), Query Frame = 0
Query:    4 NVQERTRIKSERYESGVIPYAKMGYWDADYNVKDTDILALFRITPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPGTSDQFFAYVAYECDLFEEGSLANLTASIIGNVFGFKAVKALRLEDMRIPFAYLKTFQGPATGVIVERERLDKFGRPLLGATVKPKLGLSGKNYGRVVYEGLRGGLDFLKDDENINSQPFMRWKERFLYCMEGVNRAAAATGEVKGSYLNVTAATIEQMYERAEYAHAIGSVIVMVDLVIGYTAIQTMAIWARKAEMILHLHRAGNSTYARQKNHGINFRVICKWMRMCGVDHIHAGTVVGKLEGDPLMVRGFYNSLLLTQLKVNLAEGLFFDMDWASLRKCVPVASGGIHCGQMHQLLYYLGDDVVLQFGGGTIGHPDGIQAGATANRVALEAMVLARNEGRDYVGEGPEILRNAASTCGPLKAALDLWKDITFEYTSTDTPDFVEVAT 485
            +V ERTRIK+ERYESGVIPYAKMGYWD +Y++K+TD+LALFRITPQPGVDP+EAAAAVAGESSTATWTVVWTDLLTACD+YRAKAYRVDPVP ++DQ+FAY+AYECDLFEEGS+ANLTASIIGNVFGFKAV+ALRLEDMRIP AYLKTFQGPATGV+VERERLDKFGRPLLGATVKPKLGLSGKNYGRVVYEGL+GGLDFLKDDENINSQPFMRW+ERFLY MEG+NRAAA +GEVKGSYLN TAAT+E MYERAEYA A+GSVI+M+DLVIGY+AIQ+MAIW+R  +MILHLHRAGNSTYARQKNHGINFRVICKWMRM GVDHIHAGTVVGKLEGDPLMV+GFY SLL T+L+VNL +GLFFDMDWA+LRKC+PVASGGIHCGQMHQL+YYLGDDVVLQFGGGTIGHPDGIQAGATANRVALEAMVLARNEGRDYV EGP+ILR AASTC PL+ ALDLWKDI+F YTSTDT DFVE AT
Sbjct:    2 SVSERTRIKNERYESGVIPYAKMGYWDGNYSIKETDVLALFRITPQPGVDPIEAAAAVAGESSTATWTVVWTDLLTACDVYRAKAYRVDPVPNSTDQYFAYIAYECDLFEEGSIANLTASIIGNVFGFKAVQALRLEDMRIPIAYLKTFQGPATGVVVERERLDKFGRPLLGATVKPKLGLSGKNYGRVVYEGLKGGLDFLKDDENINSQPFMRWRERFLYVMEGINRAAAGSGEVKGSYLNCTAATMEDMYERAEYARAVGSVIIMIDLVIGYSAIQSMAIWSRNNDMILHLHRAGNSTYARQKNHGINFRVICKWMRMAGVDHIHAGTVVGKLEGDPLMVQGFYASLLATELQVNLPQGLFFDMDWAALRKCMPVASGGIHCGQMHQLIYYLGDDVVLQFGGGTIGHPDGIQAGATANRVALEAMVLARNEGRDYVAEGPQILRTAASTCAPLQTALDLWKDISFNYTSTDTADFVETAT 483          
BLAST of mRNA_H-elongata_contig120842.1601.1 vs. uniprot
Match: A2A0V7_9PHAE (Ribulose bisphosphate carboxylase large chain (Fragment) n=6 Tax=Phaeophyceae TaxID=2870 RepID=A2A0V7_9PHAE)

HSP 1 Score: 877 bits (2265), Expect = 0.000e+0
Identity = 420/462 (90.91%), Postives = 452/462 (97.84%), Query Frame = 0
Query:   21 IPYAKMGYWDADYNVKDTDILALFRITPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPGTSDQFFAYVAYECDLFEEGSLANLTASIIGNVFGFKAVKALRLEDMRIPFAYLKTFQGPATGVIVERERLDKFGRPLLGATVKPKLGLSGKNYGRVVYEGLRGGLDFLKDDENINSQPFMRWKERFLYCMEGVNRAAAATGEVKGSYLNVTAATIEQMYERAEYAHAIGSVIVMVDLVIGYTAIQTMAIWARKAEMILHLHRAGNSTYARQKNHGINFRVICKWMRMCGVDHIHAGTVVGKLEGDPLMVRGFYNSLLLTQLKVNLAEGLFFDMDWASLRKCVPVASGGIHCGQMHQLLYYLGDDVVLQFGGGTIGHPDGIQAGATANRVALEAMVLARNEGRDYVGEGPEILRNAASTCGPLKAALDLWKDITFEYTSTDTPDFVE 482
            IPYAKMGYWDADY+VK+TD+L+LFRITPQPGVDP+EAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVP T+DQFFAY+AY+ DLFEEGSLANLTASIIGNVFGFKAVKALRLEDMR+P AYLKT+QGPATGVIVERERLD FGRPLLGATVKPKLGLSGKNYGRVVYEGLRGGLDFLKDDENINSQPFMRWKER+LYCMEGVNRAAAATGEVKG+YLN+T+ATIE MYERAEYA AIG+VIVM+DLVIGYTAIQTMAIWARKA+MILHLHRAGNSTYARQKNHGINFRVICKWMRM GVDHIHAGTVVGKLEGDPLMV+GFYN+LLLT+L+++LA+G+FFDMDWASLRKC+PVASGGIHCGQMHQL+YYLGDDVVLQFGGGTIGHPDGIQAGATANRVALE+M+LARNEGR+YV EGPEILR+AA TCGPLK ALDLWKDITFEYTSTDTPDF+E
Sbjct:    1 IPYAKMGYWDADYSVKETDVLSLFRITPQPGVDPIEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPNTTDQFFAYIAYDIDLFEEGSLANLTASIIGNVFGFKAVKALRLEDMRLPIAYLKTYQGPATGVIVERERLDTFGRPLLGATVKPKLGLSGKNYGRVVYEGLRGGLDFLKDDENINSQPFMRWKERYLYCMEGVNRAAAATGEVKGTYLNITSATIEHMYERAEYARAIGTVIVMIDLVIGYTAIQTMAIWARKAQMILHLHRAGNSTYARQKNHGINFRVICKWMRMAGVDHIHAGTVVGKLEGDPLMVKGFYNTLLLTELEIDLAQGIFFDMDWASLRKCLPVASGGIHCGQMHQLVYYLGDDVVLQFGGGTIGHPDGIQAGATANRVALESMILARNEGREYVPEGPEILRDAAKTCGPLKTALDLWKDITFEYTSTDTPDFLE 462          
BLAST of mRNA_H-elongata_contig120842.1601.1 vs. uniprot
Match: Q70HW0_9STRA (Ribulose bisphosphate carboxylase large chain (Fragment) n=6 Tax=root TaxID=1 RepID=Q70HW0_9STRA)

HSP 1 Score: 868 bits (2242), Expect = 0.000e+0
Identity = 422/457 (92.34%), Postives = 443/457 (96.94%), Query Frame = 0
Query:   17 ESGVIPYAKMGYWDADYNVKDTDILALFRITPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPGTSDQFFAYVAYECDLFEEGSLANLTASIIGNVFGFKAVKALRLEDMRIPFAYLKTFQGPATGVIVERERLDKFGRPLLGATVKPKLGLSGKNYGRVVYEGLRGGLDFLKDDENINSQPFMRWKERFLYCMEGVNRAAAATGEVKGSYLNVTAATIEQMYERAEYAHAIGSVIVMVDLVIGYTAIQTMAIWARKAEMILHLHRAGNSTYARQKNHGINFRVICKWMRMCGVDHIHAGTVVGKLEGDPLMVRGFYNSLLLTQLKVNLAEGLFFDMDWASLRKCVPVASGGIHCGQMHQLLYYLGDDVVLQFGGGTIGHPDGIQAGATANRVALEAMVLARNEGRDYVGEGPEILRNAASTCGPLKAALDLWKDITFEYT 473
            ESGVIPYAKMGYWDADYNVK TDILALFRITPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPGT+DQFFAY+AYEC+LFEEGSLANLTASIIGNVFGFKAVKALRLEDMRIPF+YLKTFQGPATG+IVERER+DKFGRPLLGATVKPKLGLSGKNYGRVVYEGLRGGLDFLKDDENINSQPFMRW+ERFLYCMEGVNRA+AATGEVKGSYLN TAATIE+MYERA YA  IGS+I+MVDLVIGYTAIQTMAIWARK +MILHLHRAGNSTYARQKNHGINFRVICKWMRM GVDHIHAGTVVGKLEGDPLMV+GFYN+LL T+L +NL +GLFFDMDWASLRK VPVASGGIHCGQMHQLLYYLGDDVVLQFGGGTIGHPDGIQAGATANRVALEAMVLARNEGRDY+ EGP+ILR+AA TCGPLK ALDLWKDITF+YT
Sbjct:    1 ESGVIPYAKMGYWDADYNVKHTDILALFRITPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPGTTDQFFAYIAYECELFEEGSLANLTASIIGNVFGFKAVKALRLEDMRIPFSYLKTFQGPATGLIVERERMDKFGRPLLGATVKPKLGLSGKNYGRVVYEGLRGGLDFLKDDENINSQPFMRWRERFLYCMEGVNRASAATGEVKGSYLNTTAATIEEMYERALYAKEIGSIIIMVDLVIGYTAIQTMAIWARKHDMILHLHRAGNSTYARQKNHGINFRVICKWMRMSGVDHIHAGTVVGKLEGDPLMVKGFYNTLLETKLSINLPQGLFFDMDWASLRKTVPVASGGIHCGQMHQLLYYLGDDVVLQFGGGTIGHPDGIQAGATANRVALEAMVLARNEGRDYLNEGPQILRDAAKTCGPLKTALDLWKDITFDYT 457          
BLAST of mRNA_H-elongata_contig120842.1601.1 vs. uniprot
Match: A0A3R5QND5_9STRA (Ribulose bisphosphate carboxylase large chain n=93 Tax=Eukaryota TaxID=2759 RepID=A0A3R5QND5_9STRA)

HSP 1 Score: 862 bits (2228), Expect = 2.660e-314
Identity = 416/486 (85.60%), Postives = 456/486 (93.83%), Query Frame = 0
Query:    1 MPENVQERTRIKSERYESGVIPYAKMGYWDADYNVKDTDILALFRITPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPGTSDQFFAYVAYECDLFEEGSLANLTASIIGNVFGFKAVKALRLEDMRIPFAYLKTFQGPATGVIVERERLDKFGRPLLGATVKPKLGLSGKNYGRVVYEGLRGGLDFLKDDENINSQPFMRWKERFLYCMEGVNRAAAATGEVKGSYLNVTAATIEQMYERAEYAHAIGSVIVMVDLVIGYTAIQTMAIWARKAEMILHLHRAGNSTYARQKNHGINFRVICKWMRMCGVDHIHAGTVVGKLEGDPLMVRGFYNSLLLTQLKVNLAEGLFFDMDWASLRKCVPVASGGIHCGQMHQLLYYLGDDVVLQFGGGTIGHPDGIQAGATANRVALEAMVLARNEGRDYVGEGPEILRNAASTCGPLKAALDLWKDITFEYTSTDTPDFVEVATE 486
            M ++V+ERTRIK+ERYESGVIPYA+MGYWDA Y VKDTD+LALFRITPQPGVDP+EAAAAVAGESSTATWTVVWTDLLTACDIYRAKAY+VDPVPG +DQ+F Y+AYECDLFEEGSLANLTASIIGNVFGFKAVKALRLEDMRIP+AYLKTFQGPATGV+VERERLDKFGRPLLGATVKPKLGLSGKNYGRVV+EGLRGGLDFLKDDENINSQPFMRW+ERF Y MEGVNR+AAA+GEVKGSYLNVTA T+E MYERAE+A  IGSVI+M+DLVIGYTAIQ+MA+WAR+ +MILHLHRAGNSTYARQKNHGINFRVICKWMRM GVDHIHAGTVVGKLEGDPLMV+GFYN LLLT L+VNL +G+FFDMDWASLRK +PVASGGIHCGQMHQLL+YLG+D VLQFGGGTIGHPDGI +GATANRVALE+M+LARNEGRDY+ EGP+ILR AA  C PL+ ALDLWKDI F Y+STDT DFVE  T+
Sbjct:    1 MFQSVEERTRIKNERYESGVIPYAEMGYWDAAYTVKDTDVLALFRITPQPGVDPIEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYKVDPVPGAADQYFGYIAYECDLFEEGSLANLTASIIGNVFGFKAVKALRLEDMRIPYAYLKTFQGPATGVVVERERLDKFGRPLLGATVKPKLGLSGKNYGRVVFEGLRGGLDFLKDDENINSQPFMRWRERFAYVMEGVNRSAAASGEVKGSYLNVTAGTMENMYERAEFAKLIGSVIIMIDLVIGYTAIQSMAVWARQNDMILHLHRAGNSTYARQKNHGINFRVICKWMRMAGVDHIHAGTVVGKLEGDPLMVKGFYNVLLLTDLEVNLPQGIFFDMDWASLRKVLPVASGGIHCGQMHQLLHYLGEDCVLQFGGGTIGHPDGIASGATANRVALESMLLARNEGRDYLKEGPKILRTAAEQCTPLRVALDLWKDIAFNYSSTDTADFVETTTK 486          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig120842.1601.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
RBL_ECTSI0.000e+095.08Ribulose bisphosphate carboxylase large chain n=22... [more]
A0A858LFZ1_9STRA0.000e+092.21Ribulose bisphosphate carboxylase large chain n=9 ... [more]
Q8HSH1_9STRA0.000e+089.14Ribulose bisphosphate carboxylase large chain n=10... [more]
B8LGQ9_9STRA0.000e+089.34Ribulose bisphosphate carboxylase large chain n=18... [more]
A0A0H5BNA2_9PHAE0.000e+091.70Ribulose bisphosphate carboxylase large chain (Fra... [more]
RBL_OLILU0.000e+087.06Ribulose bisphosphate carboxylase large chain n=38... [more]
A0A7U0QG21_OLILU0.000e+087.55Ribulose bisphosphate carboxylase large chain n=2 ... [more]
A2A0V7_9PHAE0.000e+090.91Ribulose bisphosphate carboxylase large chain (Fra... [more]
Q70HW0_9STRA0.000e+092.34Ribulose bisphosphate carboxylase large chain (Fra... [more]
A0A3R5QND5_9STRA2.660e-31485.60Ribulose bisphosphate carboxylase large chain n=93... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036376Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamilyGENE3D3.20.20.110coord: 154..483
e-value: 1.1E-130
score: 437.4
IPR036376Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamilySUPERFAMILY51649RuBisCo, C-terminal domaincoord: 154..480
IPR036422RuBisCO large subunit, N-terminal domain superfamilyGENE3D3.30.70.150coord: 26..152
e-value: 1.4E-49
score: 169.1
IPR036422RuBisCO large subunit, N-terminal domain superfamilySUPERFAMILY54966RuBisCO, large subunit, small (N-terminal) domaincoord: 12..153
IPR000685Ribulose bisphosphate carboxylase, large subunit, C-terminalPFAMPF00016RuBisCO_largecoord: 158..465
e-value: 1.9E-127
score: 424.5
IPR017443Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminalPFAMPF02788RuBisCO_large_Ncoord: 28..148
e-value: 1.5E-44
score: 151.0
IPR033966RuBisCOPANTHERPTHR42704FAMILY NOT NAMEDcoord: 16..477
NoneNo IPR availablePANTHERPTHR42704:SF5coord: 16..477
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 281..488
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 260..280
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..259
NoneNo IPR availableTMHMMTMhelixcoord: 263..285
IPR020878Ribulose bisphosphate carboxylase, large chain, active sitePROSITEPS00157RUBISCO_LARGEcoord: 200..208
IPR020888Ribulose bisphosphate carboxylase large subunit, type IHAMAPMF_01338RuBisCO_L_type1coord: 12..478
score: 53.928

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig120842contigH-elongata_contig120842:119..1585 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig120842.1601.1mRNA_H-elongata_contig120842.1601.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig120842 119..1585 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig120842.1601.1 ID=prot_H-elongata_contig120842.1601.1|Name=mRNA_H-elongata_contig120842.1601.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=489bp
MPENVQERTRIKSERYESGVIPYAKMGYWDADYNVKDTDILALFRITPQP
GVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPGTSDQ
FFAYVAYECDLFEEGSLANLTASIIGNVFGFKAVKALRLEDMRIPFAYLK
TFQGPATGVIVERERLDKFGRPLLGATVKPKLGLSGKNYGRVVYEGLRGG
LDFLKDDENINSQPFMRWKERFLYCMEGVNRAAAATGEVKGSYLNVTAAT
IEQMYERAEYAHAIGSVIVMVDLVIGYTAIQTMAIWARKAEMILHLHRAG
NSTYARQKNHGINFRVICKWMRMCGVDHIHAGTVVGKLEGDPLMVRGFYN
SLLLTQLKVNLAEGLFFDMDWASLRKCVPVASGGIHCGQMHQLLYYLGDD
VVLQFGGGTIGHPDGIQAGATANRVALEAMVLARNEGRDYVGEGPEILRN
AASTCGPLKAALDLWKDITFEYTSTDTPDFVEVATESK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036376RuBisCO_lsu_C_sf
IPR036422RuBisCO_lsu_N_sf
IPR000685RuBisCO_lsu_C
IPR017443RuBisCO_lsu_fd_N
IPR033966RuBisCO
IPR020878RuBisCo_large_chain_AS
IPR020888RuBisCO_lsuI