mRNA_H-elongata_contig12064.1583.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig12064.1583.1
Unique NamemRNA_H-elongata_contig12064.1583.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig12064.1583.1 vs. uniprot
Match: D8LFT9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFT9_ECTSI)

HSP 1 Score: 403 bits (1035), Expect = 1.030e-132
Identity = 209/266 (78.57%), Postives = 229/266 (86.09%), Query Frame = 2
Query:  125 VSEKPSFSASLLGGGMAGTAVDVALFPLDTIKTRLQSSAGFFKAGGFRGVYNGISAAAVGSAPGAALFFSSYEAAKHAMDPKSPASQMAAASIAESIACLVRVPTENVKQKMQAGLHGSASSTVTSILKTSGPLGFYAGYLTTVMREIPFSFIQFPIYEWLKVKLANIRGKRLESYEAASCGSVSGAIAAGVTTPIDVVKTRIMLGKDKHGTAYRGLLQTFQRVYTEEGAAALMSGVVPRVTWISIGGFVFFGVYEASKARLMSLG 922
            +SE+PSF ASLL GGMAGTAVDVAL+PLDTIKTRLQS  GF K+GG RGVYNG+SAAAVGSAPGAALFFSSYEAAKHA+DP SP + MAAAS+AE++ACLVRVPTENVKQKMQAGLHG+A+ T+ +ILK SG +GFY GYLTTV+REIPFSFIQFPIYE LK   A  RG  LE YEAA CGSVSGA AA VTTP+DVVKTR+MLG DKHG  YRGL  TF+RVYTEEGAAALMSGV PRVTWI IGGFVFFGVYE +K  LM LG
Sbjct:    1 MSEQPSFVASLLAGGMAGTAVDVALYPLDTIKTRLQSPEGFVKSGGLRGVYNGLSAAAVGSAPGAALFFSSYEAAKHALDPDSPLAHMAAASVAETMACLVRVPTENVKQKMQAGLHGTATETMNAILKNSGMMGFYTGYLTTVVREIPFSFIQFPIYEGLKAAWAKRRGGPLEPYEAAGCGSVSGAFAAAVTTPMDVVKTRLMLGTDKHGETYRGLGDTFRRVYTEEGAAALMSGVTPRVTWIGIGGFVFFGVYEGAKTWLMGLG 266          
BLAST of mRNA_H-elongata_contig12064.1583.1 vs. uniprot
Match: A0A835YJ97_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ97_9STRA)

HSP 1 Score: 338 bits (868), Expect = 1.040e-107
Identity = 178/266 (66.92%), Postives = 209/266 (78.57%), Query Frame = 2
Query:  134 KPSFSASLLGGGMAGTAVDVALFPLDTIKTRLQSSAGFFKAGGFRGVYNGISAAAVGSAPGAALFFSSYEAAKHAM-DPKSPASQMAAASIAESIACLVRVPTENVKQKMQAGLHGSASSTVT---SILKTSGPLGFYAGYLTTVMREIPFSFIQFPIYEWLKVKLANIRGKRLESYEAASCGSVSGAIAAGVTTPIDVVKTRIMLGKDKHGTAYRGLLQTFQRVYTEEGAAALMSGVVPRVTWISIGGFVFFGVYEASKARLMSL 919
            +PSF  +L+ GG+AGT+VDVALFPLDTIKTRLQSS GF KAGGF+GVYNG+SAAAVGSAPGAA FFS+YE  K  + DP +P++ MAAAS AE +ACLVRVPTENVKQKMQAG+  S+SS V    SIL  SG  GFYAGY+TT+MREIPFS IQFP+YE +K      RG  + SY+AA CGS+SGA A  +TTP DVVKTR+MLG DKHG  Y+G++ TFQR+  +EGAAAL  G+VPRV WI IGGFVFFG YEASK  L  +
Sbjct:    4 QPSFVLALVSGGIAGTSVDVALFPLDTIKTRLQSSQGFIKAGGFKGVYNGLSAAAVGSAPGAAAFFSTYEGLKVRLGDPSAPSTHMAAASGAEIVACLVRVPTENVKQKMQAGVGTSSSSAVATCRSILSASGARGFYAGYMTTIMREIPFSLIQFPLYERMKAVWGRRRGAPVHSYQAAVCGSLSGAFAGALTTPFDVVKTRLMLGADKHGLPYKGMVPTFQRIVADEGAAALFGGIVPRVMWIGIGGFVFFGAYEASKRTLAGV 269          
BLAST of mRNA_H-elongata_contig12064.1583.1 vs. uniprot
Match: A0A7S2Y3T2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y3T2_9STRA)

HSP 1 Score: 322 bits (824), Expect = 4.250e-101
Identity = 171/268 (63.81%), Postives = 204/268 (76.12%), Query Frame = 2
Query:  119 MTVSEKPSFSASLLGGGMAGTAVDVALFPLDTIKTRLQSSAGFFKAGGFRGVYNGISAAAVGSAPGAALFFSSYEAAKH----AMDPK-SPASQMAAASIAESIACLVRVPTENVKQKMQAGLHGSASSTVTSILKTSGPLGFYAGYLTTVMREIPFSFIQFPIYEWLKVKLANIRGKRLESYEAASCGSVSGAIAAGVTTPIDVVKTRIMLGK-DKHGTAYRGLLQTFQRVYTEEGAAALMSGVVPRVTWISIGGFVFFGVYEASKA 904
            M   EK SF  +LL GG AGT+VDVALFPLDTIKTRLQSS GF KAGGFRG+Y G+SAAA GSAPGAALFFSSYEA+K       D K +P   M +AS+ E++ACLVRVPTE VKQ+MQ G +GS    V++I+KT GP GFY GYLTTV REIPFSFIQFP+YE LK   +  +GK +   ++A CGS+SG IAAG+TTP+DVVKTR+MLG+ D HG  Y G+L T Q++Y +EG   L +G  PRVTWISIGGFVFFG YEA+K+
Sbjct:    1 MVSQEKNSFLVNLLSGGCAGTSVDVALFPLDTIKTRLQSSEGFVKAGGFRGIYRGLSAAAAGSAPGAALFFSSYEASKEWGTKTFDEKYAPLVHMGSASVGETVACLVRVPTEVVKQRMQTGQYGSFREAVSTIMKTEGPGGFYTGYLTTVAREIPFSFIQFPMYEGLKKYWSEWQGKEVGPSQSALCGSISGGIAAGITTPLDVVKTRLMLGQADLHGVKYEGMLSTLQKIYVQEGMPKLFAGFSPRVTWISIGGFVFFGSYEAAKS 268          
BLAST of mRNA_H-elongata_contig12064.1583.1 vs. uniprot
Match: A0A1V9ZD58_9STRA (S-adenosylmethionine mitochondrial carrier protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZD58_9STRA)

HSP 1 Score: 301 bits (772), Expect = 1.990e-93
Identity = 157/268 (58.58%), Postives = 192/268 (71.64%), Query Frame = 2
Query:  125 VSEKPSFSASLLGGGMAGTAVDVALFPLDTIKTRLQSSAGFFKAGGFRGVYNGISAAAVGSAPGAALFFSSYEAAKHAMDPK------SPASQMAAASIAESIACLVRVPTENVKQKMQAGLHGSASSTVTSILKTSGPLGFYAGYLTTVMREIPFSFIQFPIYEWLKVKLANIRGKRLESYEAASCGSVSGAIAAGVTTPIDVVKTRIMLGKDKHGTAYRGLLQTFQRVYTEEGAAALMSGVVPRVTWISIGGFVFFGVYEASKARL 910
             S   SF  SL+ GG+AGT+VDVALFPLDTIKTRLQSS GF KAGGF+GVY G+SAAA GSAPGAALFFS+YE +K  +  K      SP   M+AA+  E+ ACLVRVPTE VKQ MQ G       ++ ++   +G  GFY GY + + REIPFSFIQFP++E LK   +  RG+++  ++ A CGS+SG IAA +TTP+DVVKTR+MLGKD HG  YRG+  TF RVYT+EG   L SG+ PR  WISIGGFVFFG YE++ A L
Sbjct:    4 TSSSKSFFTSLIAGGIAGTSVDVALFPLDTIKTRLQSSQGFLKAGGFKGVYKGLSAAAAGSAPGAALFFSTYETSKEVLQNKLPHLSNSPLIHMSAAACGETAACLVRVPTEIVKQNMQTGALSGFQHSIKTLYAANGIAGFYRGYWSMLAREIPFSFIQFPLWEGLKATWSKQRGEQVSPFQGAICGSISGGIAASITTPLDVVKTRLMLGKDAHGVEYRGMKDTFMRVYTDEGWQTLFSGIKPRTMWISIGGFVFFGAYESASAFL 271          
BLAST of mRNA_H-elongata_contig12064.1583.1 vs. uniprot
Match: A0A7S1UH46_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UH46_9STRA)

HSP 1 Score: 298 bits (762), Expect = 8.640e-92
Identity = 158/260 (60.77%), Postives = 193/260 (74.23%), Query Frame = 2
Query:  152 SLLGGGMAGTAVDVALFPLDTIKTRLQSSAGFFKAGGFRGVYNGISAAAVGSAPGAALFFSSYEAAKHAMDPK---SPASQMAAASIAESIACLVRVPTENVKQKMQAGLHGSASSTVTSILKTSGPLGFYAGYLTTVMREIPFSFIQFPIYEWLK-VKLANIRGKRLESYEAASCGSVSGAIAAGVTTPIDVVKTRIMLGKDKHGTAYRGLLQTFQRVYTEEGAAALMSGVVPRVTWISIGGFVFFGVYEASKARLMSL 919
            SL+ GG+AGT VDV LFPLDTIKTRLQ+  GF K+GGF G++ G+SAAAVGSAPGA+LFF SYE AK  ++P+   +P + MAAAS+ E  AC+VRVPTE +KQ+MQA +  +A   + ++L T G LG + GY +TV REIPFS IQFP+YE LK V  A+     L  YE+A CGSVSGA +A VTTP+DVVKTR+MLG DK G AY G+  TF+RV  +EGAAAL  GV PRV WISIGGF FFG YE +KA LM +
Sbjct:   25 SLISGGVAGTTVDVVLFPLDTIKTRLQAPEGFMKSGGFNGLFKGVSAAAVGSAPGASLFFMSYETAKQNLEPRMESAPVAHMAAASLGEVAACVVRVPTEIIKQRMQANMFPTAQGALRNVLDTEGVLGLWRGYGSTVAREIPFSLIQFPLYEHLKKVWAASKASGELRPYESALCGSVSGAFSAAVTTPLDVVKTRLMLGADKAGVAYDGMASTFRRVVADEGAAALFKGVQPRVMWISIGGFFFFGAYEGTKASLMGM 284          
BLAST of mRNA_H-elongata_contig12064.1583.1 vs. uniprot
Match: A0A5D6XPF9_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XPF9_9STRA)

HSP 1 Score: 296 bits (758), Expect = 2.490e-91
Identity = 157/256 (61.33%), Postives = 189/256 (73.83%), Query Frame = 2
Query:  143 FSASLLGGGMAGTAVDVALFPLDTIKTRLQSSAGFFKAGGFRGVYNGISAAAVGSAPGAALFFSSYEAAKHAMDP------KSPASQMAAASIAESIACLVRVPTENVKQKMQAGLHGSASSTVTSILKTSGPLGFYAGYLTTVMREIPFSFIQFPIYEWLKVKLANIRGKRLESYEAASCGSVSGAIAAGVTTPIDVVKTRIMLGKDKHGTAYRGLLQTFQRVYTEEGAAALMSGVVPRVTWISIGGFVFFGVYE 892
            F  SLLGG +AGT+VD+ALFPLDTIKTRLQS+ GFFKAGGFRGVY+G+SAAA GSAPG A+FFS+YE +K+A+         SP + MAAA+  E+ ACLVRVPTE VKQ+MQ G++ S    VTSI    G LGFY GY + + REIPFSFIQFP++E LK +     G  + S + A CGS++G +AA +TTP+DVVKTR+MLGKD  G  Y+G L TF RVY E G A L SGV PR  WISIGGFVFFG+YE
Sbjct:   15 FLPSLLGGAVAGTSVDIALFPLDTIKTRLQSADGFFKAGGFRGVYSGLSAAAAGSAPGGAMFFSTYETSKNAIGKYFPEKKHSPFAHMAAAACGETAACLVRVPTEIVKQRMQTGMYKSIGEAVTSIRAAEGLLGFYRGYFSMIAREIPFSFIQFPLWEGLKSQ-----GSPVSSLQGAICGSIAGGVAASITTPLDVVKTRLMLGKDAQGVPYQGTLSTFSRVYQEGGVARLFSGVGPRTMWISIGGFVFFGMYE 265          
BLAST of mRNA_H-elongata_contig12064.1583.1 vs. uniprot
Match: A0A067C9P7_SAPPC (Uncharacterized protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C9P7_SAPPC)

HSP 1 Score: 295 bits (756), Expect = 4.910e-91
Identity = 157/263 (59.70%), Postives = 189/263 (71.86%), Query Frame = 2
Query:  140 SFSASLLGGGMAGTAVDVALFPLDTIKTRLQSSAGFFKAGGFRGVYNGISAAAVGSAPGAALFFSSYEAAKHAMDP------KSPASQMAAASIAESIACLVRVPTENVKQKMQAGLHGSASSTVTSILKTSGPLGFYAGYLTTVMREIPFSFIQFPIYEWLKVKLANIRGKRLESYEAASCGSVSGAIAAGVTTPIDVVKTRIMLGKDKHGTAYRGLLQTFQRVYTEEGAAALMSGVVPRVTWISIGGFVFFGVYEASKARL 910
            SF  SL+ GG+AGT+VDVALFPLDTIKTRLQSS GF KAGGF+GVY G+SAAA GSAPGAALFFS+YE AK A+         SP   M AA+  E+ ACLVRVPTE VKQ MQ G       ++ ++   +G  GFY GY + + REIPFSFIQFP++E LK   +  +G+++ + + A CGS+SG IAA +TTP+DVVKTR+MLGKD +G  YRG+  TF RVYTEEG   L SGV PR  WISIGGFVFFG YE + A L
Sbjct:   10 SFFTSLVAGGIAGTSVDVALFPLDTIKTRLQSSQGFIKAGGFKGVYKGLSAAAAGSAPGAALFFSTYETAKEALQTHLPHMANSPFIHMGAAACGETAACLVRVPTEIVKQNMQTGALNGFQHSIKTLHAANGIAGFYRGYWSMLAREIPFSFIQFPLWEGLKATWSAKQGEQVSALQGALCGSISGGIAASITTPLDVVKTRLMLGKDANGVEYRGMKDTFMRVYTEEGWQRLFSGVKPRTMWISIGGFVFFGAYETASASL 272          
BLAST of mRNA_H-elongata_contig12064.1583.1 vs. uniprot
Match: A0A024U5F9_9STRA (Uncharacterized protein n=9 Tax=Aphanomyces TaxID=100860 RepID=A0A024U5F9_9STRA)

HSP 1 Score: 292 bits (748), Expect = 7.430e-90
Identity = 155/263 (58.94%), Postives = 186/263 (70.72%), Query Frame = 2
Query:  140 SFSASLLGGGMAGTAVDVALFPLDTIKTRLQSSAGFFKAGGFRGVYNGISAAAVGSAPGAALFFSSYEAAKHAMDP------KSPASQMAAASIAESIACLVRVPTENVKQKMQAGLHGSASSTVTSILKTSGPLGFYAGYLTTVMREIPFSFIQFPIYEWLKVKLANIRGKRLESYEAASCGSVSGAIAAGVTTPIDVVKTRIMLGKDKHGTAYRGLLQTFQRVYTEEGAAALMSGVVPRVTWISIGGFVFFGVYEASKARL 910
            SF  SL+ GGMAGT VDVAL+PLDTIKTRLQSS GF KAGGF+GVY G+SAAA GSAPGAALFFS+YE  K  +         SP   MA+A++ E+  CLVRVPTE VKQ +Q G   S   ++ SI  TSG  GFY GY + + REIPFSFIQFP++E +K    + +G+ +   + A CGS+SG  AA VTTP+DV+KTR+MLGKD  G  YRG+   F RVYT+EG   L SGV PR TWI+IGGFVFFGVYE + A L
Sbjct:   11 SFLTSLIAGGMAGTGVDVALYPLDTIKTRLQSSQGFLKAGGFKGVYKGLSAAAAGSAPGAALFFSTYETTKRFLQQLQPHLADSPVVHMASAAMGETAGCLVRVPTEIVKQNLQTGAFQSFQESIRSIYGTSGVAGFYRGYWSLLAREIPFSFIQFPLWEGMKTAWGHHQGEIVSPVQGAVCGSISGGFAAFVTTPLDVIKTRLMLGKDAQGVEYRGMRDAFTRVYTQEGWQTLFSGVKPRTTWITIGGFVFFGVYEQASATL 273          
BLAST of mRNA_H-elongata_contig12064.1583.1 vs. uniprot
Match: A0A8K1CHB3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CHB3_PYTOL)

HSP 1 Score: 292 bits (748), Expect = 9.390e-90
Identity = 152/256 (59.38%), Postives = 186/256 (72.66%), Query Frame = 2
Query:  143 FSASLLGGGMAGTAVDVALFPLDTIKTRLQSSAGFFKAGGFRGVYNGISAAAVGSAPGAALFFSSYEAAKHAM------DPKSPASQMAAASIAESIACLVRVPTENVKQKMQAGLHGSASSTVTSILKTSGPLGFYAGYLTTVMREIPFSFIQFPIYEWLKVKLANIRGKRLESYEAASCGSVSGAIAAGVTTPIDVVKTRIMLGKDKHGTAYRGLLQTFQRVYTEEGAAALMSGVVPRVTWISIGGFVFFGVYE 892
            F ASLLGG +AGT+VD+ALFPLDTIKTRLQS+ GFFKAGGFRGVY+G+SAAA GSAPG A+FFS+YE +K A+        +SP + M AA++ E  ACLVRVPTE VKQ+MQ G++ S    +  I  T G  GFY GY + + REIPFSFIQFP++E LK + +  +   + S + A CGS++G  AA +TTP+DVVKTR+MLGKD  G  Y G + TF RVY EEG   L SGV PR  WISIGGFVFFG+YE
Sbjct:   17 FLASLLGGAVAGTSVDIALFPLDTIKTRLQSAEGFFKAGGFRGVYSGLSAAAAGSAPGGAMFFSAYETSKKAIAATFPEHKQSPFAHMGAAAVGEMSACLVRVPTEIVKQRMQTGVYSSLQGAIVGIRTTEGVFGFYRGYWSMIAREIPFSFIQFPLWEGLKNQWSKQQNAPVSSLQGAICGSIAGGCAASITTPLDVVKTRLMLGKDAKGVPYTGTVDTFTRVYREEGVKRLFSGVGPRTMWISIGGFVFFGMYE 272          
BLAST of mRNA_H-elongata_contig12064.1583.1 vs. uniprot
Match: A0A7S1EJZ1_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1EJZ1_HEMAN)

HSP 1 Score: 291 bits (744), Expect = 2.790e-89
Identity = 156/270 (57.78%), Postives = 187/270 (69.26%), Query Frame = 2
Query:  116 RMTVSEKPSFSASLLGGGMAGTAVDVALFPLDTIKTRLQSSAGFFKAGGFRGVYNGISAAAVGSAPGAALFFSSYEAAKHAMDPK-----SPASQMAAASIAESIACLVRVPTENVKQKMQAGLHGSASSTVTSILKTSGPLGFYAGYLTTVMREIPFSFIQFPIYEWLKVKLANIRGKRLESYEAASCGSVSGAIAAGVTTPIDVVKTRIMLGKDKHGTAYRGLLQTFQRVYTEEGAAALMSGVVPRVTWISIGGFVFFGVYEASKARL 910
            RM   ++ SF  +L+ GG AGTAVDVALFP+DTIKTRLQ+  GF K+GGFRG+YNG+++AA GSAPGAALFFS+YE  K  M  +      PA  M A+S  E  AC+VRVPTENVKQKMQAG   +    ++SI    G +GFY GY+ TV REIPF  IQFP+YE LK + AN +G      ++A CGS++G IAA  TTP+DVVKTR+MLGKD  G AY G+  TF RVY E G   L +GV PR  WISIGG VFFG YE SK  L
Sbjct:    4 RMGGDKETSFRVALVAGGAAGTAVDVALFPIDTIKTRLQAPEGFLKSGGFRGIYNGLASAAAGSAPGAALFFSTYEMMKKRMMDRIEERYHPACYMGASSCGEIAACMVRVPTENVKQKMQAGHFATNGEALSSIWNARGMMGFYQGYMMTVFREIPFVLIQFPLYEGLKKRWANHQGHASTPLQSALCGSLAGGIAAAATTPLDVVKTRLMLGKDSEGVAYDGIANTFSRVYAEGGVGRLFAGVGPRTMWISIGGCVFFGAYEKSKQLL 273          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12064.1583.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFT9_ECTSI1.030e-13278.57Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YJ97_9STRA1.040e-10766.92Mitochondrial carrier domain-containing protein n=... [more]
A0A7S2Y3T2_9STRA4.250e-10163.81Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A1V9ZD58_9STRA1.990e-9358.58S-adenosylmethionine mitochondrial carrier protein... [more]
A0A7S1UH46_9STRA8.640e-9260.77Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A5D6XPF9_9STRA2.490e-9161.33Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A067C9P7_SAPPC4.910e-9159.70Uncharacterized protein n=3 Tax=Saprolegniaceae Ta... [more]
A0A024U5F9_9STRA7.430e-9058.94Uncharacterized protein n=9 Tax=Aphanomyces TaxID=... [more]
A0A8K1CHB3_PYTOL9.390e-9059.38Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S1EJZ1_HEMAN2.790e-8957.78Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig12064contigH-elongata_contig12064:876..5840 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score411.0
Seed ortholog evalue4.3e-112
Seed eggNOG ortholog2880.D8LFT9
Preferred nameSLC25A26
KEGG koko:K15111
KEGG TC2.A.29.18
GOsGO:0000095,GO:0003674,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0006810,GO:0006811,GO:0006839,GO:0006855,GO:0008150,GO:0015238,GO:0015805,GO:0015893,GO:0016020,GO:0016021,GO:0019866,GO:0022857,GO:0031090,GO:0031224,GO:0031966,GO:0031967,GO:0031975,GO:0042221,GO:0042493,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0050896,GO:0051179,GO:0051181,GO:0051182,GO:0051184,GO:0051185,GO:0051234,GO:0055085,GO:0071702,GO:0072348,GO:1901682,GO:1901962
EggNOG free text desc.S-adenosyl-L-methionine transmembrane transport
EggNOG OGsKOG0768@1,KOG0768@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionMitochondrial carrier protein
Ec32 orthologEc-01_000960.1
Exons6
Model size2289
Cds size810
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig12064.1583.1prot_H-elongata_contig12064.1583.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig12064 994..4479 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929707.8407865-UTR-H-elongata_contig12064:875..9931622929707.8407865-UTR-H-elongata_contig12064:875..993Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12064 876..993 +
1691679127.0305-UTR-H-elongata_contig12064:875..9931691679127.0305-UTR-H-elongata_contig12064:875..993Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12064 876..993 +
1622929708.0017195-UTR-H-elongata_contig12064:4479..58401622929708.0017195-UTR-H-elongata_contig12064:4479..5840Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12064 4480..5840 +
1691679127.123145-UTR-H-elongata_contig12064:4479..58401691679127.123145-UTR-H-elongata_contig12064:4479..5840Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12064 4480..5840 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929707.8913705-CDS-H-elongata_contig12064:993..10351622929707.8913705-CDS-H-elongata_contig12064:993..1035Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12064 994..1035 +
1691679127.0462692-CDS-H-elongata_contig12064:993..10351691679127.0462692-CDS-H-elongata_contig12064:993..1035Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12064 994..1035 +
1622929707.9056184-CDS-H-elongata_contig12064:2398..25551622929707.9056184-CDS-H-elongata_contig12064:2398..2555Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12064 2399..2555 +
1691679127.0602345-CDS-H-elongata_contig12064:2398..25551691679127.0602345-CDS-H-elongata_contig12064:2398..2555Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12064 2399..2555 +
1622929707.925484-CDS-H-elongata_contig12064:2954..30491622929707.925484-CDS-H-elongata_contig12064:2954..3049Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12064 2955..3049 +
1691679127.070672-CDS-H-elongata_contig12064:2954..30491691679127.070672-CDS-H-elongata_contig12064:2954..3049Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12064 2955..3049 +
1622929707.9443367-CDS-H-elongata_contig12064:3297..36301622929707.9443367-CDS-H-elongata_contig12064:3297..3630Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12064 3298..3630 +
1691679127.0787086-CDS-H-elongata_contig12064:3297..36301691679127.0787086-CDS-H-elongata_contig12064:3297..3630Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12064 3298..3630 +
1622929707.9617758-CDS-H-elongata_contig12064:3946..40451622929707.9617758-CDS-H-elongata_contig12064:3946..4045Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12064 3947..4045 +
1691679127.0888093-CDS-H-elongata_contig12064:3946..40451691679127.0888093-CDS-H-elongata_contig12064:3946..4045Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12064 3947..4045 +
1622929707.9812827-CDS-H-elongata_contig12064:4395..44791622929707.9812827-CDS-H-elongata_contig12064:4395..4479Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12064 4396..4479 +
1691679127.1052437-CDS-H-elongata_contig12064:4395..44791691679127.1052437-CDS-H-elongata_contig12064:4395..4479Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12064 4396..4479 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig12064.1583.1

>prot_H-elongata_contig12064.1583.1 ID=prot_H-elongata_contig12064.1583.1|Name=mRNA_H-elongata_contig12064.1583.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=270bp
MTVSEKPSFSASLLGGGMAGTAVDVALFPLDTIKTRLQSSAGFFKAGGFR
GVYNGISAAAVGSAPGAALFFSSYEAAKHAMDPKSPASQMAAASIAESIA
CLVRVPTENVKQKMQAGLHGSASSTVTSILKTSGPLGFYAGYLTTVMREI
PFSFIQFPIYEWLKVKLANIRGKRLESYEAASCGSVSGAIAAGVTTPIDV
VKTRIMLGKDKHGTAYRGLLQTFQRVYTEEGAAALMSGVVPRVTWISIGG
FVFFGVYEASKARLMSLGI*
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mRNA from alignment at H-elongata_contig12064:876..5840+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig12064.1583.1 ID=mRNA_H-elongata_contig12064.1583.1|Name=mRNA_H-elongata_contig12064.1583.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4965bp|location=Sequence derived from alignment at H-elongata_contig12064:876..5840+ (Himanthalia elongata Himel1 dioecious)
AGTTCTCCGGCTATATTTGTCGCGAGCAAAATCACTGTAATTCCGAGGCA CCAACTGTAGAGCTAATCGTGAGTCCAGCGGAAGAGTTCATCGCCAATCC AAACAGAGTACGAGGAGAATGACTGTGTCCGAGAAGCCTTCTTTCTCTGC AAGCCTCTTAGTGAGTGAGCGCAGATTGGGTCGAGTGGAAGGAGGAAAAA ACGACTGTAGTACACCGGTTAGGTTCAATTACGAAGTTCATGTCTGTTTC ACCAAAAGAATGATGGGCTCGTGGGGTTCGAGGCGTTTAGTGTGTCGAAA CTGGAAAATACGTAAATCTACCACCACGCCCAGGTGGTTCAACCGATAAC GTGGTCAACCAGTTGTATAGCATTCTTGAGTGTGAATCTCGGGGGAGGGA AGTTGGAGTGGAGAGCGCAACGCACTGAAAATGCAAAGTTCAACCATTGG TTGACGAGGTGTAGAACTACTCAACTTGAAAGATAGCCATTAAAAAACTC ATAGGCGTGAACCCGAAGAGATGGGTAGCTCTTTTAGGGTCAGAGGCGAG ATGGGCAACGTTGCGGATGGGGTGGGATTAATAACCTAGCACAGAAACAC GCACGTGGGCGTTGAATCCCAAACCCTGAACTGAACAGCACTACTGTTAT TCTCTAACATGGTCCAGTATTGCACGCTGCATGAGCGACTAACTTTGGAA GACATGCAGGAATGTTGAATGTTGGATGCGTTGAACCTTTACAGACACAT ACGAGGCGCGGGAGAACCTCGTTTGCGAAGCTCGAGACATCTCTTTCGCC AGTAGCCGCTTTACGTTCCCGCGGTGCAGAATATGGAGTCGGCAAAGCAG TCAGCAAGGGATAAAATATCAGATCGATCCCTTGGATCCATGCTTCAACT AATTGTCTTGCTCGCTTGATGTACATCACTTACCCGGCCCAGGCCTCATG TAGCTTCCTTTCCAAAAACTAATGAGCCTGATGTTTGCCCCGTTGTCCAC AAACTCTCCGAGGTAGGCGGACACTGTGGTTTTCTATGTTACACAGCGAC CGGTAATATACCTCCCGCTGTTTCGAACATGCAACCGGAACTGAGCCTAC TACAGGCTTCGACGCAATGCTCAAACTAGTAAATGAGCGCGTAGGGTTAC TCGACCCTTACGAACGTGAGAATGTGATCACCTTAGGGAAGGGGGGCGGG GGAGGAGTGCAGCCACGGTGGCTGATTTTTTTGGTCCTCTTCTTTCCTCC TATGGCGACGAGAGGGACAGGAACAGTCGCACCCCCTCAGCGAGTGGACT TCTGCAAAGTTTTCTTATCTCGTATCCTGGATAAGGTCCGATGATCGGTC ACGTCTCGACCCTCGAGAGCGGATGGTCAAGACACGTTCCCGCGTACATA CGACATCGTTGGACCGAGCCTTGCTCCCGCCCTCCTTTTTTCGTAAGAGA CGGCTACAGTTCGACTCTGCTTCCTGTCCTCTAGTAGAACTAACCTTGCC TCGCCTGGTGTGGTTCATGACAGGGTGGCGGCATGGCGGGGACAGCGGTA GACGTTGCACTCTTCCCTCTTGATACAATCAAGACCAGGCTTCAGTCCTC CGCAGGGTTTTTCAAGGCCGGGGGCTTTCGAGGGGTATACAACGGCATCA GCGCCGCCGCGGTAGGATCAGCTCCGGGAGGTGTGTATGCGCGCGGTCCA CCGCTCATTTGCAGTGATTCGTTTCAGCAGGGTTTGGGGAAGAGAGGGGG GAGGGAGAGAGGGGAGAAGAGAATGTATATCTTCTCTCTCGTCGATAGTT GGTTGCTCACAAGGTGTGCATCCGTCGCATTTTGCTTTTTCGTTTCTCGC AGGGCATCACTGGCATAAAAACTTCCTAGCTTTTGTTTTTATTGTCTATG TATGTGGGTTTTGTGGGTTTGTATGTATGTAGCGCCGAACAAGCTTCGGG AAACGCCAGCAGCAGCAGCAGCCACAGCCACAACAATGCCATTACCGCGG GTCTGCACCACGCCACAGCCAAAAGCCAACCGCCCCGCATGATTCACCGA CGAAGACAACGACCTCCACTCTGTCGCAGCGGCGCTGTTTTTCAGCTCCT ACGAAGCCGCTAAGCACGCCATGGACCCCAAGTCGCCGGCCTCTCAAATG GCCGCTGCTTCGATAGCGGAGTCGGTGAGAGCGCTGACGAGCAGCAGATG TCGAATGTAGCACGTCCACCGTTGGATTTATTTCGGCGCTTGTCGGCGCG TGCACATGGCGACTAGTTGCCTTTCGTTCGATGTCATCAAATGTGTCGTG AGCCACGACGACGGCTTGGTGGTGCTTCGAGCCCGGCAACGATGCAGCGC CCCTCATGGTTAATTCCGCCTTTTCTCCTCTTCTTCCGCCTCCCGACACC TCTCCTGGGACTTCGGCCACAGATTGCGTGCCTTGTGCGGGTGCCGACGG AAAACGTGAAGCAGAAGATGCAGGCAGGCTTGCACGGCTCGGCGTCGTCG ACCGTGACCTCAATCCTCAAGACCAGTGGGCCCCTTGGCTTCTACGCGGG CTACCTCACGACGGTGATGCGGGAGATACCGTTTTCCTTCATACAGTTCC CGATCTACGAGTGGCTCAAGGTGAAGCTGGCGAACATTCGTGGTAAAAGG CTGGAGTCGTACGAGGCTGCGAGCTGCGGCTCGGTGTCGGGTGCGATCGC CGCTGGGGTTACCACCCCGATCGACGTTGTCAAGACCAGGATCATGCTAG GGAAGGTGGGTCTGTGCACCAGGGAAAGGTGGGGGGTGAGGCTTGCGCCG CACTTTCATGTTCGCCACCCTTCAGGCACAGGCATGGCAGGGCATTTTGC AGGGTGTCATTCTTGGAACACAAGGCGATGTCCCACCCTATCATAGTTTG TTTGGGGTTTTTCTTCTAAAATTTACGAGAAGGGAAGTATAACATTTTGT AATGCCGTGTGTACTTGTGATGCGGTCGATAGCAGAGCACGCGATCGCAA ACCTTCCTCCTTTCCCATTTCCGGCAAACGCGCGCTCCTTCCTCCTAACT TTGGCCGTGTGTTTTTTGCAGGACAAGCACGGTACTGCGTACCGTGGCTT GTTGCAGACGTTTCAGCGTGTCTACACGGAAGAGGGCGCCGCAGCGCTCA TGTCGGGAGTAGTCCCACGGGTGAGAATAATTCTACTACTATACGTACGA CGAGATATGGGTTGCTTGCGTATAAGTTTGTGAAGAGCAGCTATCCAAGC TGCAAATATCTTTACCGGATTCGGAGTGCGCAGATACGCCGCAGCCACGT GTTCTTTTTTAACAATTGAATTTTGGAGAAGTTCGAGCTTGAGCCGAACG CCGAATCTTCGGATTCATTCTTTTTAAAACTTTACGAGAGCTACTGTGTC CCTCTCGATGTTCTTTTTTGTCCCGCAGTCGACGCCAAAAAATGTGTTAA GAGCGAAATACCAGAAGGCGTGGTCTTTTTTTTTAGTTATTATTTGTAAA CCTCCGCATTCCGTCGTCAGGTGACGTGGATCAGCATCGGAGGGTTCGTG TTCTTCGGGGTCTACGAGGCGTCGAAGGCAAGGCTGATGTCGTTGGGAAT CTGAGGCAAAACGGCTTCGCGGCACGGTTAGGAAAATATGGTTTGTGGAG AGAGGAGGGTGGGCAGCAAGCTTGACTCCCCGCTGCCATCTAGCTAACCG CTCCTATGGTTCGTTTCTCCTCGGTGCTTCGCTTCCACGTGGTGGTACCG TCGTAGGAAAGCTAGTGTTTTAATGTTCTTGGGCGATTACGACCTCGTGC CTCGGTCCCTCGCGTCCAGTTAGCCCGCACAAAAACGCGGTCTCCGCCGG GCTGAGCTGACCGGAGATCATAAGCAGGAGCGGTCTGTTGTGAGCGGCTT GTCAAAAAACAAACAAGCCAACAAATGATGGAGTGGTGTACAGCGATTTC CCACGTTGGTGTCGCAAGAAGTTTGTGTAGAGGAGAGAGACAGGAGACAG GGAACAGGTTGCCGCCTGCAGGTATCATGGGTGTTCGCGGACTTTTGGAG GTTTGGAGTGTTACCTTACGTTTCTTCTTTTTTGCAACATGTTCGCATAA GCTTGCTTTGTTTTTCCCGAGAGCGGTGATATCAGCCTCTTTTTTGTTTT TTGTGTTTTTTACCCCTTACCCCTCTCTCTGCCGCGGGTGATCTTTCGTA CTCGATCGCGTTTTATCGAGTCCCCTGCGGAACCATCGACGACTCGATCA TCATTAACCGACACAAGAAGTAATATTTTTAAGGCACCGTGCCTGAGATG TGCGTGATTCTTTCGGAGACGTTTCAGTAGAACGGACAAGAAGAGAATCC TCTATCCTCCGCAGCACGTTAATCGTGTGACCTAAGTGCCTGCGGTAACA GTTTCAAAGAAAACGTCTACGACTACAACTACTGACGTCATGATATATTA TTAGAGTAAAGAACGCTAAAGTAATTGCGCGGTCCTCTTGCTGAGCGTTT ACTGGGGACGACTGGACTAGAAAGGGAGAGGAGCTGGTCCCAGGCGATTT TGATAGTGATCTTTGGTTTTTGAACTTTCAGGAAACGGCGGAGTAAACTT TAGATATTTCTGCATCAAAATTGTATCAAATCAGGCTTGAGGTCAACTCG ACCGTTTTGCGATAAGATAATAATCTACGATTGTCGCGACAAACTTCGCC GCTTTTTCTACATAAAGCAAAAAAAAAAAAAAATCGTAAAGATTTTGGAC GGAGGAGACATATGTTTCAGAGCTGCGAACTTCAAGGGGGCACCGAAGTT GCACAACGGGCGGCAGGTGGCATCTAGGCGACTATTACTGTAACATATCA TGGATTCAGCTCCGGCCCTTCCAGGAGGCATCCCTATATTTTTATTATCT TAATATATTTACAACATACTTCATTTGACCAGTGTTGCCACAAAACGGTT TTGGGAGACTTGGGG
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Coding sequence (CDS) from alignment at H-elongata_contig12064:876..5840+

>mRNA_H-elongata_contig12064.1583.1 ID=mRNA_H-elongata_contig12064.1583.1|Name=mRNA_H-elongata_contig12064.1583.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1620bp|location=Sequence derived from alignment at H-elongata_contig12064:876..5840+ (Himanthalia elongata Himel1 dioecious)
ATGACTGTGTCCGAGAAGCCTTCTTTCTCTGCAAGCCTCTTAATGACTGT
GTCCGAGAAGCCTTCTTTCTCTGCAAGCCTCTTAGGTGGCGGCATGGCGG
GGACAGCGGTAGACGTTGCACTCTTCCCTCTTGATACAATCAAGACCAGG
CTTCAGTCCTCCGCAGGGTTTTTCAAGGCCGGGGGCTTTCGAGGGGTATA
CAACGGCATCAGCGCCGCCGCGGTAGGATCAGCTCCGGGAGGGTGGCGGC
ATGGCGGGGACAGCGGTAGACGTTGCACTCTTCCCTCTTGATACAATCAA
GACCAGGCTTCAGTCCTCCGCAGGGTTTTTCAAGGCCGGGGGCTTTCGAG
GGGTATACAACGGCATCAGCGCCGCCGCGGTAGGATCAGCTCCGGGAGCG
GCGCTGTTTTTCAGCTCCTACGAAGCCGCTAAGCACGCCATGGACCCCAA
GTCGCCGGCCTCTCAAATGGCCGCTGCTTCGATAGCGGAGTCGCGGCGCT
GTTTTTCAGCTCCTACGAAGCCGCTAAGCACGCCATGGACCCCAAGTCGC
CGGCCTCTCAAATGGCCGCTGCTTCGATAGCGGAGTCGATTGCGTGCCTT
GTGCGGGTGCCGACGGAAAACGTGAAGCAGAAGATGCAGGCAGGCTTGCA
CGGCTCGGCGTCGTCGACCGTGACCTCAATCCTCAAGACCAGTGGGCCCC
TTGGCTTCTACGCGGGCTACCTCACGACGGTGATGCGGGAGATACCGTTT
TCCTTCATACAGTTCCCGATCTACGAGTGGCTCAAGGTGAAGCTGGCGAA
CATTCGTGGTAAAAGGCTGGAGTCGTACGAGGCTGCGAGCTGCGGCTCGG
TGTCGGGTGCGATCGCCGCTGGGGTTACCACCCCGATCGACGTTGTCAAG
ACCAGGATCATGCTAGGGAAGATTGCGTGCCTTGTGCGGGTGCCGACGGA
AAACGTGAAGCAGAAGATGCAGGCAGGCTTGCACGGCTCGGCGTCGTCGA
CCGTGACCTCAATCCTCAAGACCAGTGGGCCCCTTGGCTTCTACGCGGGC
TACCTCACGACGGTGATGCGGGAGATACCGTTTTCCTTCATACAGTTCCC
GATCTACGAGTGGCTCAAGGTGAAGCTGGCGAACATTCGTGGTAAAAGGC
TGGAGTCGTACGAGGCTGCGAGCTGCGGCTCGGTGTCGGGTGCGATCGCC
GCTGGGGTTACCACCCCGATCGACGTTGTCAAGACCAGGATCATGCTAGG
GAAGGACAAGCACGGTACTGCGTACCGTGGCTTGTTGCAGACGTTTCAGC
GTGTCTACACGGAAGAGGGCGCCGCAGCGCTCATGTCGGGAGTAGTCCCA
CGGGACAAGCACGGTACTGCGTACCGTGGCTTGTTGCAGACGTTTCAGCG
TGTCTACACGGAAGAGGGCGCCGCAGCGCTCATGTCGGGAGTAGTCCCAC
GGGTGACGTGGATCAGCATCGGAGGGTTCGTGTTCTTCGGGGTCTACGAG
GCGTCGAAGGCAAGGCTGATGTCGTTGGGAATCTGAGTGACGTGGATCAG
CATCGGAGGGTTCGTGTTCTTCGGGGTCTACGAGGCGTCGAAGGCAAGGC
TGATGTCGTTGGGAATCTGA
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