mRNA_H-elongata_contig120461.1573.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig120461.1573.1 vs. uniprot
Match: A0A6H5JVT2_9PHAE (Dimer_Tnp_hAT domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVT2_9PHAE) HSP 1 Score: 154 bits (388), Expect = 2.470e-45 Identity = 72/89 (80.90%), Postives = 80/89 (89.89%), Query Frame = 1
Query: 1 LDTRDVLPWWQRTGQKMFPYLAPVAQQVFGNQASASQVERDFSSCGILLAPNRSRIDTYWVEMVMFLYVNFKHIPALQDIPMIAAKNIR 267
LDTR+VLPWW+ TG+KMFPYLAPVAQQV GNQA A+QVERDFSSC LL NRSRIDTYWVEMVMFL+VN+K IPA +DIPMIAAK+IR
Sbjct: 100 LDTREVLPWWRNTGRKMFPYLAPVAQQVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFLHVNYKRIPAFKDIPMIAAKDIR 188
BLAST of mRNA_H-elongata_contig120461.1573.1 vs. uniprot
Match: A0A6H5KSA7_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSA7_9PHAE) HSP 1 Score: 149 bits (375), Expect = 2.490e-44 Identity = 67/88 (76.14%), Postives = 78/88 (88.64%), Query Frame = 1
Query: 1 LDTRDVLPWWQRTGQKMFPYLAPVAQQVFGNQASASQVERDFSSCGILLAPNRSRIDTYWVEMVMFLYVNFKHIPALQDIPMIAAKNI 264
LDTR++LPWW++TG+K FPYLAPVAQQVFGNQA A+QVERDFS C LL NRSR+DTYWVEMVMFL+ NF+HIP +DIPMIAAK+I
Sbjct: 25 LDTREILPWWRQTGRKTFPYLAPVAQQVFGNQAGAAQVERDFSGCANLLTRNRSRMDTYWVEMVMFLHANFEHIPGFKDIPMIAAKDI 112
BLAST of mRNA_H-elongata_contig120461.1573.1 vs. uniprot
Match: A0A6H5JZQ5_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ5_9PHAE) HSP 1 Score: 150 bits (378), Expect = 8.620e-43 Identity = 69/89 (77.53%), Postives = 79/89 (88.76%), Query Frame = 1
Query: 1 LDTRDVLPWWQRTGQKMFPYLAPVAQQVFGNQASASQVERDFSSCGILLAPNRSRIDTYWVEMVMFLYVNFKHIPALQDIPMIAAKNIR 267
LD R+VLPWW+RTG+ +FP+LAPVAQQVFGNQA+ SQVERDFS GILLAPNRSR+DTYWVE+VMFL NF HIP L+ IPM+AAKNIR
Sbjct: 187 LDCREVLPWWKRTGKNIFPHLAPVAQQVFGNQAAVSQVERDFSGVGILLAPNRSRMDTYWVEIVMFLNANFAHIPPLKQIPMVAAKNIR 275
BLAST of mRNA_H-elongata_contig120461.1573.1 vs. uniprot
Match: A0A6H5KZ46_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ46_9PHAE) HSP 1 Score: 150 bits (379), Expect = 8.980e-41 Identity = 71/89 (79.78%), Postives = 79/89 (88.76%), Query Frame = 1
Query: 1 LDTRDVLPWWQRTGQKMFPYLAPVAQQVFGNQASASQVERDFSSCGILLAPNRSRIDTYWVEMVMFLYVNFKHIPALQDIPMIAAKNIR 267
LDTR+VLPWW+ TG+KMFP LAPVAQQV GNQA A+QVERDFSSC LL NRSRIDTYWVEMVMFL+VN+K IPA +DIPMIAAK+IR
Sbjct: 498 LDTREVLPWWRNTGRKMFPCLAPVAQQVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFLHVNYKRIPAFKDIPMIAAKDIR 586
BLAST of mRNA_H-elongata_contig120461.1573.1 vs. uniprot
Match: A0A6H5KP16_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP16_9PHAE) HSP 1 Score: 123 bits (309), Expect = 8.280e-35 Identity = 60/73 (82.19%), Postives = 65/73 (89.04%), Query Frame = 1
Query: 49 MFPYLAPVAQQVFGNQASASQVERDFSSCGILLAPNRSRIDTYWVEMVMFLYVNFKHIPALQDIPMIAAKNIR 267
MFPYLAPVAQQV GNQA A+QVERDFSSC LL NRSRIDTYWVEMVMFL+VN+K IPA +DIPMIAAK+IR
Sbjct: 1 MFPYLAPVAQQVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFLHVNYKRIPAFKDIPMIAAKDIR 73
BLAST of mRNA_H-elongata_contig120461.1573.1 vs. uniprot
Match: A0A6H5JJJ9_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJJ9_9PHAE) HSP 1 Score: 109 bits (272), Expect = 7.240e-26 Identity = 52/89 (58.43%), Postives = 63/89 (70.79%), Query Frame = 1
Query: 1 LDTRDVLPWWQRTGQKMFPYLAPVAQQVFGNQASASQVERDFSSCGILLAPNRSRIDTYWVEMVMFLYVNFKHIPALQDIPMIAAKNIR 267
L +VL +W TG+ FP L VAQQ FG+Q SA+ VERDFS CG+ L PNRSR++ YWVEMVMFL NFK IP +IP I +K+IR
Sbjct: 727 LHPTEVLSYWATTGRHSFPALKHVAQQTFGSQPSAAPVERDFSGCGLFLVPNRSRVEEYWVEMVMFLNANFKFIPKYDNIPSIDSKDIR 815
BLAST of mRNA_H-elongata_contig120461.1573.1 vs. uniprot
Match: A0A6H5KBM2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBM2_9PHAE) HSP 1 Score: 103 bits (256), Expect = 1.370e-24 Identity = 54/81 (66.67%), Postives = 63/81 (77.78%), Query Frame = 1
Query: 31 QRTGQKM--FPYLAPVAQQVFGNQASASQVERDFSSCGILLAPNRSRIDTYWVEMVMFLYVNFKHIPALQDIPMIAAKNIR 267
Q+ Q++ F L A +V GNQA A+QVERDFSSC LL NRSRIDTYWVEMVMFL+VN+K IPA +DIPMIAAK+IR
Sbjct: 209 QQVSQELERFQALYMTAGEVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFLHVNYKCIPAFKDIPMIAAKDIR 289
BLAST of mRNA_H-elongata_contig120461.1573.1 vs. uniprot
Match: A0A6H5K8W6_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8W6_9PHAE) HSP 1 Score: 103 bits (257), Expect = 5.660e-24 Identity = 51/85 (60.00%), Postives = 61/85 (71.76%), Query Frame = 1
Query: 13 DVLPWWQRTGQKMFPYLAPVAQQVFGNQASASQVERDFSSCGILLAPNRSRIDTYWVEMVMFLYVNFKHIPALQDIPMIAAKNIR 267
+VL +W RTG+ FP L VAQQ FGNQASA+ VERDFS CG+ + PNRSR+D YWVEMVMFL NF + +IP I K+IR
Sbjct: 389 EVLSYWGRTGKHAFPSLKHVAQQTFGNQASAAPVERDFSGCGLFMVPNRSRVDEYWVEMVMFLKANFNSSRRI-NIPQIDPKDIR 472
BLAST of mRNA_H-elongata_contig120461.1573.1 vs. uniprot
Match: A0A6H5KFQ8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFQ8_9PHAE) HSP 1 Score: 102 bits (255), Expect = 1.080e-23 Identity = 50/89 (56.18%), Postives = 67/89 (75.28%), Query Frame = 1
Query: 1 LDTRDVLPWWQRTGQKMFPYLAPVAQQVFGNQASASQVERDFSSCGILLAPNRSRIDTYWVEMVMFLYVNFKHIPALQDIPMIAAKNIR 267
L RDVL +W+++G+ FP L VAQQ FG+QA A+Q+ERDFS+ G+L A NR+R+D YWVEMV+FL NF+ IP DIP + +K+IR
Sbjct: 382 LQPRDVLNYWKQSGRHAFPALNYVAQQRFGSQAYAAQIERDFSTGGLLGASNRNRLDEYWVEMVLFLKANFQCIPGYDDIPNMDSKSIR 470
BLAST of mRNA_H-elongata_contig120461.1573.1 vs. uniprot
Match: A0A6H5JB08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB08_9PHAE) HSP 1 Score: 102 bits (255), Expect = 1.350e-23 Identity = 49/89 (55.06%), Postives = 64/89 (71.91%), Query Frame = 1
Query: 1 LDTRDVLPWWQRTGQKMFPYLAPVAQQVFGNQASASQVERDFSSCGILLAPNRSRIDTYWVEMVMFLYVNFKHIPALQDIPMIAAKNIR 267
L DVL +W + G++MFP L VAQQ FG+QASA+Q+ERDFS CG+ NRSR + YW+EMVM L N++ IP +DIP I +K+IR
Sbjct: 487 LPPSDVLAYWNKVGKQMFPSLKYVAQQTFGSQASAAQIERDFSHCGLFSTGNRSRAEEYWLEMVMVLKGNYELIPDYKDIPSIDSKDIR 575 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig120461.1573.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig120461.1573.1 >prot_H-elongata_contig120461.1573.1 ID=prot_H-elongata_contig120461.1573.1|Name=mRNA_H-elongata_contig120461.1573.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=89bp LDTRDVLPWWQRTGQKMFPYLAPVAQQVFGNQASASQVERDFSSCGILLAback to top mRNA from alignment at H-elongata_contig120461:423..689- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig120461.1573.1 ID=mRNA_H-elongata_contig120461.1573.1|Name=mRNA_H-elongata_contig120461.1573.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=267bp|location=Sequence derived from alignment at H-elongata_contig120461:423..689- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig120461:423..689- >mRNA_H-elongata_contig120461.1573.1 ID=mRNA_H-elongata_contig120461.1573.1|Name=mRNA_H-elongata_contig120461.1573.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=534bp|location=Sequence derived from alignment at H-elongata_contig120461:423..689- (Himanthalia elongata Himel1 dioecious)back to top |