prot_H-elongata_contig120461.1573.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig120461.1573.1
Unique Name	prot_H-elongata_contig120461.1573.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	89

Homology

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BLAST of mRNA_H-elongata_contig120461.1573.1 vs. uniprot
Match: A0A6H5JVT2_9PHAE (Dimer_Tnp_hAT domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVT2_9PHAE)

HSP 1 Score: 154 bits (388), Expect = 2.470e-45
Identity = 72/89 (80.90%), Postives = 80/89 (89.89%), Query Frame = 0

Query:    1 LDTRDVLPWWQRTGQKMFPYLAPVAQQVFGNQASASQVERDFSSCGILLAPNRSRIDTYWVEMVMFLYVNFKHIPALQDIPMIAAKNIR 89
            LDTR+VLPWW+ TG+KMFPYLAPVAQQV GNQA A+QVERDFSSC  LL  NRSRIDTYWVEMVMFL+VN+K IPA +DIPMIAAK+IR
Sbjct:  100 LDTREVLPWWRNTGRKMFPYLAPVAQQVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFLHVNYKRIPAFKDIPMIAAKDIR 188

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BLAST of mRNA_H-elongata_contig120461.1573.1 vs. uniprot
Match: A0A6H5KSA7_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSA7_9PHAE)

HSP 1 Score: 149 bits (375), Expect = 2.490e-44
Identity = 67/88 (76.14%), Postives = 78/88 (88.64%), Query Frame = 0

Query:    1 LDTRDVLPWWQRTGQKMFPYLAPVAQQVFGNQASASQVERDFSSCGILLAPNRSRIDTYWVEMVMFLYVNFKHIPALQDIPMIAAKNI 88
            LDTR++LPWW++TG+K FPYLAPVAQQVFGNQA A+QVERDFS C  LL  NRSR+DTYWVEMVMFL+ NF+HIP  +DIPMIAAK+I
Sbjct:   25 LDTREILPWWRQTGRKTFPYLAPVAQQVFGNQAGAAQVERDFSGCANLLTRNRSRMDTYWVEMVMFLHANFEHIPGFKDIPMIAAKDI 112

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BLAST of mRNA_H-elongata_contig120461.1573.1 vs. uniprot
Match: A0A6H5JZQ5_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ5_9PHAE)

HSP 1 Score: 150 bits (378), Expect = 8.620e-43
Identity = 69/89 (77.53%), Postives = 79/89 (88.76%), Query Frame = 0

Query:    1 LDTRDVLPWWQRTGQKMFPYLAPVAQQVFGNQASASQVERDFSSCGILLAPNRSRIDTYWVEMVMFLYVNFKHIPALQDIPMIAAKNIR 89
            LD R+VLPWW+RTG+ +FP+LAPVAQQVFGNQA+ SQVERDFS  GILLAPNRSR+DTYWVE+VMFL  NF HIP L+ IPM+AAKNIR
Sbjct:  187 LDCREVLPWWKRTGKNIFPHLAPVAQQVFGNQAAVSQVERDFSGVGILLAPNRSRMDTYWVEIVMFLNANFAHIPPLKQIPMVAAKNIR 275

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BLAST of mRNA_H-elongata_contig120461.1573.1 vs. uniprot
Match: A0A6H5KZ46_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ46_9PHAE)

HSP 1 Score: 150 bits (379), Expect = 8.980e-41
Identity = 71/89 (79.78%), Postives = 79/89 (88.76%), Query Frame = 0

Query:    1 LDTRDVLPWWQRTGQKMFPYLAPVAQQVFGNQASASQVERDFSSCGILLAPNRSRIDTYWVEMVMFLYVNFKHIPALQDIPMIAAKNIR 89
            LDTR+VLPWW+ TG+KMFP LAPVAQQV GNQA A+QVERDFSSC  LL  NRSRIDTYWVEMVMFL+VN+K IPA +DIPMIAAK+IR
Sbjct:  498 LDTREVLPWWRNTGRKMFPCLAPVAQQVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFLHVNYKRIPAFKDIPMIAAKDIR 586

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BLAST of mRNA_H-elongata_contig120461.1573.1 vs. uniprot
Match: A0A6H5KP16_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP16_9PHAE)

HSP 1 Score: 123 bits (309), Expect = 8.280e-35
Identity = 60/73 (82.19%), Postives = 65/73 (89.04%), Query Frame = 0

Query:   17 MFPYLAPVAQQVFGNQASASQVERDFSSCGILLAPNRSRIDTYWVEMVMFLYVNFKHIPALQDIPMIAAKNIR 89
            MFPYLAPVAQQV GNQA A+QVERDFSSC  LL  NRSRIDTYWVEMVMFL+VN+K IPA +DIPMIAAK+IR
Sbjct:    1 MFPYLAPVAQQVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFLHVNYKRIPAFKDIPMIAAKDIR 73

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BLAST of mRNA_H-elongata_contig120461.1573.1 vs. uniprot
Match: A0A6H5JJJ9_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJJ9_9PHAE)

HSP 1 Score: 109 bits (272), Expect = 7.240e-26
Identity = 52/89 (58.43%), Postives = 63/89 (70.79%), Query Frame = 0

Query:    1 LDTRDVLPWWQRTGQKMFPYLAPVAQQVFGNQASASQVERDFSSCGILLAPNRSRIDTYWVEMVMFLYVNFKHIPALQDIPMIAAKNIR 89
            L   +VL +W  TG+  FP L  VAQQ FG+Q SA+ VERDFS CG+ L PNRSR++ YWVEMVMFL  NFK IP   +IP I +K+IR
Sbjct:  727 LHPTEVLSYWATTGRHSFPALKHVAQQTFGSQPSAAPVERDFSGCGLFLVPNRSRVEEYWVEMVMFLNANFKFIPKYDNIPSIDSKDIR 815

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BLAST of mRNA_H-elongata_contig120461.1573.1 vs. uniprot
Match: A0A6H5KBM2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBM2_9PHAE)

HSP 1 Score: 103 bits (256), Expect = 1.370e-24
Identity = 54/81 (66.67%), Postives = 63/81 (77.78%), Query Frame = 0

Query:   11 QRTGQKM--FPYLAPVAQQVFGNQASASQVERDFSSCGILLAPNRSRIDTYWVEMVMFLYVNFKHIPALQDIPMIAAKNIR 89
            Q+  Q++  F  L   A +V GNQA A+QVERDFSSC  LL  NRSRIDTYWVEMVMFL+VN+K IPA +DIPMIAAK+IR
Sbjct:  209 QQVSQELERFQALYMTAGEVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFLHVNYKCIPAFKDIPMIAAKDIR 289

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BLAST of mRNA_H-elongata_contig120461.1573.1 vs. uniprot
Match: A0A6H5K8W6_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8W6_9PHAE)

HSP 1 Score: 103 bits (257), Expect = 5.660e-24
Identity = 51/85 (60.00%), Postives = 61/85 (71.76%), Query Frame = 0

Query:    5 DVLPWWQRTGQKMFPYLAPVAQQVFGNQASASQVERDFSSCGILLAPNRSRIDTYWVEMVMFLYVNFKHIPALQDIPMIAAKNIR 89
            +VL +W RTG+  FP L  VAQQ FGNQASA+ VERDFS CG+ + PNRSR+D YWVEMVMFL  NF     + +IP I  K+IR
Sbjct:  389 EVLSYWGRTGKHAFPSLKHVAQQTFGNQASAAPVERDFSGCGLFMVPNRSRVDEYWVEMVMFLKANFNSSRRI-NIPQIDPKDIR 472

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BLAST of mRNA_H-elongata_contig120461.1573.1 vs. uniprot
Match: A0A6H5KFQ8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFQ8_9PHAE)

HSP 1 Score: 102 bits (255), Expect = 1.080e-23
Identity = 50/89 (56.18%), Postives = 67/89 (75.28%), Query Frame = 0

Query:    1 LDTRDVLPWWQRTGQKMFPYLAPVAQQVFGNQASASQVERDFSSCGILLAPNRSRIDTYWVEMVMFLYVNFKHIPALQDIPMIAAKNIR 89
            L  RDVL +W+++G+  FP L  VAQQ FG+QA A+Q+ERDFS+ G+L A NR+R+D YWVEMV+FL  NF+ IP   DIP + +K+IR
Sbjct:  382 LQPRDVLNYWKQSGRHAFPALNYVAQQRFGSQAYAAQIERDFSTGGLLGASNRNRLDEYWVEMVLFLKANFQCIPGYDDIPNMDSKSIR 470

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BLAST of mRNA_H-elongata_contig120461.1573.1 vs. uniprot
Match: A0A6H5JB08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB08_9PHAE)

HSP 1 Score: 102 bits (255), Expect = 1.350e-23
Identity = 49/89 (55.06%), Postives = 64/89 (71.91%), Query Frame = 0

Query:    1 LDTRDVLPWWQRTGQKMFPYLAPVAQQVFGNQASASQVERDFSSCGILLAPNRSRIDTYWVEMVMFLYVNFKHIPALQDIPMIAAKNIR 89
            L   DVL +W + G++MFP L  VAQQ FG+QASA+Q+ERDFS CG+    NRSR + YW+EMVM L  N++ IP  +DIP I +K+IR
Sbjct:  487 LPPSDVLAYWNKVGKQMFPSLKYVAQQTFGSQASAAQIERDFSHCGLFSTGNRSRAEEYWLEMVMVLKGNYELIPDYKDIPSIDSKDIR 575

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig120461.1573.1 vs. uniprot

BLAST of mRNA_H-elongata_contig120461.1573.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JVT2_9PHAE	2.470e-45	80.90	Dimer_Tnp_hAT domain-containing protein n=3 Tax=Ec...	[more]
A0A6H5KSA7_9PHAE	2.490e-44	76.14	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5JZQ5_9PHAE	8.620e-43	77.53	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5KZ46_9PHAE	8.980e-41	79.78	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5KP16_9PHAE	8.280e-35	82.19	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5JJJ9_9PHAE	7.240e-26	58.43	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5KBM2_9PHAE	1.370e-24	66.67	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K8W6_9PHAE	5.660e-24	60.00	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5KFQ8_9PHAE	1.080e-23	56.18	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5JB08_9PHAE	1.350e-23	55.06	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008906	HAT, C-terminal dimerisation domain	PFAM	PF05699	Dimer_Tnp_hAT	coord: 4..68 e-value: 3.5E-8 score: 33.1
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 2..73

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig120461	contig	H-elongata_contig120461:423..689 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig120461.1573.1	mRNA_H-elongata_contig120461.1573.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig120461 423..689 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig120461.1573.1 ID=prot_H-elongata_contig120461.1573.1|Name=mRNA_H-elongata_contig120461.1573.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=89bp
LDTRDVLPWWQRTGQKMFPYLAPVAQQVFGNQASASQVERDFSSCGILLA
PNRSRIDTYWVEMVMFLYVNFKHIPALQDIPMIAAKNIR

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR008906	HATC_C_dom
IPR012337	RNaseH-like_sf