mRNA_H-elongata_contig119600.1510.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig119600.1510.1 vs. uniprot
Match: UPI001F8D56D1 (Uncharacterized protein n=1 Tax=Spodoptera exigua TaxID=7107 RepID=UPI001F8D56D1) HSP 1 Score: 58.9 bits (141), Expect = 1.780e-7 Identity = 29/113 (25.66%), Postives = 58/113 (51.33%), Query Frame = 1
Query: 7 AESPGEAWSKLVQHYHASGLKERRRLIVDFYTMKMELDEHPRNFLLRVDQMVKELKRVERPMDPKDVNIVILSGLTSQYDAEVRMLESLSDWTTLDWIERAVINQFNRLESEK 345
A+S EAW+ L + Y GL + L+ + K+ +L ++ ++ +L +E P+D + + ++ILSGLTS YD + +E+ T + + ++ + R E ++
Sbjct: 72 AKSAYEAWNNLKKTYEGKGLCRKLGLLRSLFGTKLADSNSMDGYLNKIKEVAHQLSEIESPLDDEFIAVIILSGLTSDYDPLIMAIENSGQKLTTEHVSAKLLQETQRREDKQ 184
BLAST of mRNA_H-elongata_contig119600.1510.1 vs. uniprot
Match: UPI00103FEA55 (uncharacterized protein LOC114361313 n=2 Tax=Ostrinia furnacalis TaxID=93504 RepID=UPI00103FEA55) HSP 1 Score: 56.6 bits (135), Expect = 9.870e-7 Identity = 31/112 (27.68%), Postives = 56/112 (50.00%), Query Frame = 1
Query: 7 AESPGEAWSKLVQHYHASGLKERRRLIVDFYTMKMELDEHPRNFLLRVDQMVKELKRVERPMDPKDVNIVILSGLTSQYDAEVRMLESLSDWTTLDWIERAVINQFNRLESE 342
A+S EAW+ L + Y GL R L+ + K+ +L ++ ++ +L +E P+D + V ++ILSGLT YD + +E S + + I ++ + R E +
Sbjct: 74 AKSAHEAWTILQKTYEGRGLSRRLGLLRSLFNTKLSECSSMEVYLNKIKEISHQLSEIESPLDDELVAVIILSGLTDDYDPLIMAIEHSSSKLSTEVISTKLLQETQRREEK 185
BLAST of mRNA_H-elongata_contig119600.1510.1 vs. uniprot
Match: A0A2H1WMK4_SPOFR (SFRICE_021333 n=1 Tax=Spodoptera frugiperda TaxID=7108 RepID=A0A2H1WMK4_SPOFR) HSP 1 Score: 55.5 bits (132), Expect = 2.220e-6 Identity = 28/112 (25.00%), Postives = 57/112 (50.89%), Query Frame = 1
Query: 7 AESPGEAWSKLVQHYHASGLKERRRLIVDFYTMKMELDEHPRNFLLRVDQMVKELKRVERPMDPKDVNIVILSGLTSQYDAEVRMLESLSDWTTLDWIERAVINQFNRLESE 342
A+S EAW L + Y GL R L+ + K+ + +L ++ ++ +L +E P+D + V +++LSGLT YD + +E + + + I + ++ + + E +
Sbjct: 77 AKSAHEAWKILQKAYEGRGLSRRLGLLRSLFNTKLSENSSMEVYLNKIKEISHQLNEIESPLDDEFVAVIMLSGLTDDYDPLIMAIEHSTSKLSTEIISQKLLQETQKREEK 188
BLAST of mRNA_H-elongata_contig119600.1510.1 vs. uniprot
Match: A0A2H1VB05_SPOFR (SFRICE_041671 (Fragment) n=1 Tax=Spodoptera frugiperda TaxID=7108 RepID=A0A2H1VB05_SPOFR) HSP 1 Score: 53.5 bits (127), Expect = 2.590e-6 Identity = 26/87 (29.89%), Postives = 47/87 (54.02%), Query Frame = 1
Query: 7 AESPGEAWSKLVQHYHASGLKERRRLIVDFYTMKMELDEHPRNFLLRVDQMVKELKRVERPMDPKDVNIVILSGLTSQYDAEVRMLE 267
A+S EAW L + Y GL R L+ ++ K+ + +L ++ ++ +L +E P+D + V +++LSGLT YD + +E
Sbjct: 46 AKSAHEAWKILQKAYEGRGLSRRLGLLRSLFSTKLSENSSMEVYLNKIKEISHQLNEIESPLDDEFVAVIMLSGLTDDYDPLIMAIE 132
BLAST of mRNA_H-elongata_contig119600.1510.1 vs. uniprot
Match: A0A0J7K5G8_LASNI (Retrovirus-related pol polyprotein from transposon tnt 1-94 (Fragment) n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7K5G8_LASNI) HSP 1 Score: 54.7 bits (130), Expect = 5.240e-6 Identity = 32/123 (26.02%), Postives = 65/123 (52.85%), Query Frame = 1
Query: 7 AESPGEAWSKLVQHYHASGLKERRRLIVDFYTMKMELDEHPRNFLLRVDQMVKELKRVERPMDPKDVNIVILSGLTSQYDAEVRMLESLSDWTTLDWIERAVINQFNRLESEKSAAGSKAMFA 375
AES EAW L + Y GL R L+ M ++ + +++ + + ++L + P+D + + +++LSGLT Y+ + LES + T D+++ ++ + S S++G KA+++
Sbjct: 79 AESAREAWLNLQKAYEDKGLSRRLALLRTLAGMILQNFRNMESYVNEIMSVSQKLADMNAPLDDEFIAVIMLSGLTEDYNPMIMALESANVGLTSDFVKAKLLQ--DTKHSISSSSGDKALYS 199
BLAST of mRNA_H-elongata_contig119600.1510.1 vs. uniprot
Match: UPI00103F0D66 (uncharacterized protein LOC114362197 n=1 Tax=Ostrinia furnacalis TaxID=93504 RepID=UPI00103F0D66) HSP 1 Score: 53.1 bits (126), Expect = 6.110e-6 Identity = 28/90 (31.11%), Postives = 47/90 (52.22%), Query Frame = 1
Query: 7 AESPGEAWSKLVQHYHASGLKERRRLIVDFYTMKMELDEHPRNFLLRVDQMVKELKRVERPMDPKDVNIVILSGLTSQYDAEVRMLESLS 276
A+S EAW+ L + Y GL R L+ + K+ +L ++ ++ +L +E P+D + V ++ILSGLT YD + +E S
Sbjct: 74 AKSAHEAWTILQKTYEGRGLSRRLGLLRSLFNTKLSECSSMEVYLNKIKEISHQLSEIESPLDDELVAVIILSGLTDDYDPLIMAIEHSS 163
BLAST of mRNA_H-elongata_contig119600.1510.1 vs. uniprot
Match: X1XSQ9_ACYPI (CCHC-type domain-containing protein n=1 Tax=Acyrthosiphon pisum TaxID=7029 RepID=X1XSQ9_ACYPI) HSP 1 Score: 52.8 bits (125), Expect = 1.710e-5 Identity = 35/131 (26.72%), Postives = 68/131 (51.91%), Query Frame = 1
Query: 28 WSKLVQHYHASGLKERRRLIVDFYTMKMELDEHPRNFLLRVDQMVKELKRVERPMDPKDVNIVILSGLTSQYDAEVRMLESLSDWT-TLDWIERAVINQF-NRLESE--KSAAGSKAMFAGRGNDHGSNPP 408
W KL+ + G+ R L+ T+K +E N+L+R D +V++LK ++ + ++L L Y V +E+LS+ + T+D+++ +++++ R+ S+ KSA S + F+ H N P
Sbjct: 55 WDKLIATFERKGVSSRLYLLKRLLTIKYNEEEPIENYLIRFDDLVRQLKSAGGKIEEDFLACLLLLSLPESYGIVVTAIETLSNNSITVDFVKCRLMDEYLKRINSDHVKSAVDSSSAFSSMIKCHECNEP 185
BLAST of mRNA_H-elongata_contig119600.1510.1 vs. uniprot
Match: UPI00193D6898 (uncharacterized protein LOC113006278 n=1 Tax=Solenopsis invicta TaxID=13686 RepID=UPI00193D6898) HSP 1 Score: 53.1 bits (126), Expect = 2.020e-5 Identity = 32/116 (27.59%), Postives = 63/116 (54.31%), Query Frame = 1
Query: 7 AESPGEAWSKLVQHYHASGLKERRRLIVDFYTMKMELDEHPRNFLLRVDQMVKELKRVERPMDPKDVNIVILSGLTSQYDAEVRMLESLSDWTTLDWIERAVIN--QFNRLESEKS 348
AE+ EAWS L + Y GL R L+ MK++ ++ ++ + + ++L ++ +D + V +++LSGLT Y+ V LES + T D+++ ++ +++ SEK+
Sbjct: 79 AENAKEAWSNLQKAYEDKGLSRRLTLLRTLSGMKLQNFKNMELYVSEIMSISQKLADMDAALDDEFVAVIMLSGLTEDYNPMVMALESANIRLTSDFVKAKLLQDIKYSNSSSEKA 194
BLAST of mRNA_H-elongata_contig119600.1510.1 vs. uniprot
Match: A0A2A4K3A2_HELVI (CCHC-type domain-containing protein n=1 Tax=Heliothis virescens TaxID=7102 RepID=A0A2A4K3A2_HELVI) HSP 1 Score: 52.0 bits (123), Expect = 4.410e-5 Identity = 28/113 (24.78%), Postives = 59/113 (52.21%), Query Frame = 1
Query: 7 AESPGEAWSKLVQHYHASGLKERRRLIVDFYTMKMELDEHPRNFLLRVDQMVKELKRVERPMDPKDVNIVILSGLTSQYDAEVRMLESLSDWTTLDWIERAVINQFNRLESEK 345
A++ EAW L + + GL R L+ + K+ + +L ++ + ++L + P+D + V +++LSGLTS +D + LE+ + D ++ ++ +F R E ++
Sbjct: 77 AKTAFEAWHNLQRAFEDKGLCRRLSLLRSLFGTKLGENTSMEGYLSKITNLSQQLSDIGFPLDDEFVAVLMLSGLTSDFDPLIMALENSNTKLHSDTVKGKLLQEFQRREEKE 189 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig119600.1510.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig119600.1510.1 >prot_H-elongata_contig119600.1510.1 ID=prot_H-elongata_contig119600.1510.1|Name=mRNA_H-elongata_contig119600.1510.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=136bp QEAESPGEAWSKLVQHYHASGLKERRRLIVDFYTMKMELDEHPRNFLLRVback to top mRNA from alignment at H-elongata_contig119600:1257..1664- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig119600.1510.1 ID=mRNA_H-elongata_contig119600.1510.1|Name=mRNA_H-elongata_contig119600.1510.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=408bp|location=Sequence derived from alignment at H-elongata_contig119600:1257..1664- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig119600:1257..1664- >mRNA_H-elongata_contig119600.1510.1 ID=mRNA_H-elongata_contig119600.1510.1|Name=mRNA_H-elongata_contig119600.1510.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=816bp|location=Sequence derived from alignment at H-elongata_contig119600:1257..1664- (Himanthalia elongata Himel1 dioecious)back to top |