prot_H-elongata_contig119600.1510.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig119600.1510.1
Unique Nameprot_H-elongata_contig119600.1510.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length136
Homology
BLAST of mRNA_H-elongata_contig119600.1510.1 vs. uniprot
Match: UPI001F8D56D1 (Uncharacterized protein n=1 Tax=Spodoptera exigua TaxID=7107 RepID=UPI001F8D56D1)

HSP 1 Score: 58.9 bits (141), Expect = 1.780e-7
Identity = 29/113 (25.66%), Postives = 58/113 (51.33%), Query Frame = 0
Query:    3 AESPGEAWSKLVQHYHASGLKERRRLIVDFYTMKMELDEHPRNFLLRVDQMVKELKRVERPMDPKDVNIVILSGLTSQYDAEVRMLESLSDWTTLDWIERAVINQFNRLESEK 115
            A+S  EAW+ L + Y   GL  +  L+   +  K+        +L ++ ++  +L  +E P+D + + ++ILSGLTS YD  +  +E+     T + +   ++ +  R E ++
Sbjct:   72 AKSAYEAWNNLKKTYEGKGLCRKLGLLRSLFGTKLADSNSMDGYLNKIKEVAHQLSEIESPLDDEFIAVIILSGLTSDYDPLIMAIENSGQKLTTEHVSAKLLQETQRREDKQ 184          
BLAST of mRNA_H-elongata_contig119600.1510.1 vs. uniprot
Match: UPI00103FEA55 (uncharacterized protein LOC114361313 n=2 Tax=Ostrinia furnacalis TaxID=93504 RepID=UPI00103FEA55)

HSP 1 Score: 56.6 bits (135), Expect = 9.870e-7
Identity = 31/112 (27.68%), Postives = 56/112 (50.00%), Query Frame = 0
Query:    3 AESPGEAWSKLVQHYHASGLKERRRLIVDFYTMKMELDEHPRNFLLRVDQMVKELKRVERPMDPKDVNIVILSGLTSQYDAEVRMLESLSDWTTLDWIERAVINQFNRLESE 114
            A+S  EAW+ L + Y   GL  R  L+   +  K+        +L ++ ++  +L  +E P+D + V ++ILSGLT  YD  +  +E  S   + + I   ++ +  R E +
Sbjct:   74 AKSAHEAWTILQKTYEGRGLSRRLGLLRSLFNTKLSECSSMEVYLNKIKEISHQLSEIESPLDDELVAVIILSGLTDDYDPLIMAIEHSSSKLSTEVISTKLLQETQRREEK 185          
BLAST of mRNA_H-elongata_contig119600.1510.1 vs. uniprot
Match: A0A2H1WMK4_SPOFR (SFRICE_021333 n=1 Tax=Spodoptera frugiperda TaxID=7108 RepID=A0A2H1WMK4_SPOFR)

HSP 1 Score: 55.5 bits (132), Expect = 2.220e-6
Identity = 28/112 (25.00%), Postives = 57/112 (50.89%), Query Frame = 0
Query:    3 AESPGEAWSKLVQHYHASGLKERRRLIVDFYTMKMELDEHPRNFLLRVDQMVKELKRVERPMDPKDVNIVILSGLTSQYDAEVRMLESLSDWTTLDWIERAVINQFNRLESE 114
            A+S  EAW  L + Y   GL  R  L+   +  K+  +     +L ++ ++  +L  +E P+D + V +++LSGLT  YD  +  +E  +   + + I + ++ +  + E +
Sbjct:   77 AKSAHEAWKILQKAYEGRGLSRRLGLLRSLFNTKLSENSSMEVYLNKIKEISHQLNEIESPLDDEFVAVIMLSGLTDDYDPLIMAIEHSTSKLSTEIISQKLLQETQKREEK 188          
BLAST of mRNA_H-elongata_contig119600.1510.1 vs. uniprot
Match: A0A2H1VB05_SPOFR (SFRICE_041671 (Fragment) n=1 Tax=Spodoptera frugiperda TaxID=7108 RepID=A0A2H1VB05_SPOFR)

HSP 1 Score: 53.5 bits (127), Expect = 2.590e-6
Identity = 26/87 (29.89%), Postives = 47/87 (54.02%), Query Frame = 0
Query:    3 AESPGEAWSKLVQHYHASGLKERRRLIVDFYTMKMELDEHPRNFLLRVDQMVKELKRVERPMDPKDVNIVILSGLTSQYDAEVRMLE 89
            A+S  EAW  L + Y   GL  R  L+   ++ K+  +     +L ++ ++  +L  +E P+D + V +++LSGLT  YD  +  +E
Sbjct:   46 AKSAHEAWKILQKAYEGRGLSRRLGLLRSLFSTKLSENSSMEVYLNKIKEISHQLNEIESPLDDEFVAVIMLSGLTDDYDPLIMAIE 132          
BLAST of mRNA_H-elongata_contig119600.1510.1 vs. uniprot
Match: A0A0J7K5G8_LASNI (Retrovirus-related pol polyprotein from transposon tnt 1-94 (Fragment) n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7K5G8_LASNI)

HSP 1 Score: 54.7 bits (130), Expect = 5.240e-6
Identity = 32/123 (26.02%), Postives = 65/123 (52.85%), Query Frame = 0
Query:    3 AESPGEAWSKLVQHYHASGLKERRRLIVDFYTMKMELDEHPRNFLLRVDQMVKELKRVERPMDPKDVNIVILSGLTSQYDAEVRMLESLSDWTTLDWIERAVINQFNRLESEKSAAGSKAMFA 125
            AES  EAW  L + Y   GL  R  L+     M ++   +  +++  +  + ++L  +  P+D + + +++LSGLT  Y+  +  LES +   T D+++  ++   +   S  S++G KA+++
Sbjct:   79 AESAREAWLNLQKAYEDKGLSRRLALLRTLAGMILQNFRNMESYVNEIMSVSQKLADMNAPLDDEFIAVIMLSGLTEDYNPMIMALESANVGLTSDFVKAKLLQ--DTKHSISSSSGDKALYS 199          
BLAST of mRNA_H-elongata_contig119600.1510.1 vs. uniprot
Match: UPI00103F0D66 (uncharacterized protein LOC114362197 n=1 Tax=Ostrinia furnacalis TaxID=93504 RepID=UPI00103F0D66)

HSP 1 Score: 53.1 bits (126), Expect = 6.110e-6
Identity = 28/90 (31.11%), Postives = 47/90 (52.22%), Query Frame = 0
Query:    3 AESPGEAWSKLVQHYHASGLKERRRLIVDFYTMKMELDEHPRNFLLRVDQMVKELKRVERPMDPKDVNIVILSGLTSQYDAEVRMLESLS 92
            A+S  EAW+ L + Y   GL  R  L+   +  K+        +L ++ ++  +L  +E P+D + V ++ILSGLT  YD  +  +E  S
Sbjct:   74 AKSAHEAWTILQKTYEGRGLSRRLGLLRSLFNTKLSECSSMEVYLNKIKEISHQLSEIESPLDDELVAVIILSGLTDDYDPLIMAIEHSS 163          
BLAST of mRNA_H-elongata_contig119600.1510.1 vs. uniprot
Match: X1XSQ9_ACYPI (CCHC-type domain-containing protein n=1 Tax=Acyrthosiphon pisum TaxID=7029 RepID=X1XSQ9_ACYPI)

HSP 1 Score: 52.8 bits (125), Expect = 1.710e-5
Identity = 35/131 (26.72%), Postives = 68/131 (51.91%), Query Frame = 0
Query:   10 WSKLVQHYHASGLKERRRLIVDFYTMKMELDEHPRNFLLRVDQMVKELKRVERPMDPKDVNIVILSGLTSQYDAEVRMLESLSDWT-TLDWIERAVINQF-NRLESE--KSAAGSKAMFAGRGNDHGSNPP 136
            W KL+  +   G+  R  L+    T+K   +E   N+L+R D +V++LK     ++   +  ++L  L   Y   V  +E+LS+ + T+D+++  +++++  R+ S+  KSA  S + F+     H  N P
Sbjct:   55 WDKLIATFERKGVSSRLYLLKRLLTIKYNEEEPIENYLIRFDDLVRQLKSAGGKIEEDFLACLLLLSLPESYGIVVTAIETLSNNSITVDFVKCRLMDEYLKRINSDHVKSAVDSSSAFSSMIKCHECNEP 185          
BLAST of mRNA_H-elongata_contig119600.1510.1 vs. uniprot
Match: UPI00193D6898 (uncharacterized protein LOC113006278 n=1 Tax=Solenopsis invicta TaxID=13686 RepID=UPI00193D6898)

HSP 1 Score: 53.1 bits (126), Expect = 2.020e-5
Identity = 32/116 (27.59%), Postives = 63/116 (54.31%), Query Frame = 0
Query:    3 AESPGEAWSKLVQHYHASGLKERRRLIVDFYTMKMELDEHPRNFLLRVDQMVKELKRVERPMDPKDVNIVILSGLTSQYDAEVRMLESLSDWTTLDWIERAVIN--QFNRLESEKS 116
            AE+  EAWS L + Y   GL  R  L+     MK++  ++   ++  +  + ++L  ++  +D + V +++LSGLT  Y+  V  LES +   T D+++  ++   +++   SEK+
Sbjct:   79 AENAKEAWSNLQKAYEDKGLSRRLTLLRTLSGMKLQNFKNMELYVSEIMSISQKLADMDAALDDEFVAVIMLSGLTEDYNPMVMALESANIRLTSDFVKAKLLQDIKYSNSSSEKA 194          
BLAST of mRNA_H-elongata_contig119600.1510.1 vs. uniprot
Match: A0A2A4K3A2_HELVI (CCHC-type domain-containing protein n=1 Tax=Heliothis virescens TaxID=7102 RepID=A0A2A4K3A2_HELVI)

HSP 1 Score: 52.0 bits (123), Expect = 4.410e-5
Identity = 28/113 (24.78%), Postives = 59/113 (52.21%), Query Frame = 0
Query:    3 AESPGEAWSKLVQHYHASGLKERRRLIVDFYTMKMELDEHPRNFLLRVDQMVKELKRVERPMDPKDVNIVILSGLTSQYDAEVRMLESLSDWTTLDWIERAVINQFNRLESEK 115
            A++  EAW  L + +   GL  R  L+   +  K+  +     +L ++  + ++L  +  P+D + V +++LSGLTS +D  +  LE+ +     D ++  ++ +F R E ++
Sbjct:   77 AKTAFEAWHNLQRAFEDKGLCRRLSLLRSLFGTKLGENTSMEGYLSKITNLSQQLSDIGFPLDDEFVAVLMLSGLTSDFDPLIMALENSNTKLHSDTVKGKLLQEFQRREEKE 189          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig119600.1510.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
UPI001F8D56D11.780e-725.66Uncharacterized protein n=1 Tax=Spodoptera exigua ... [more]
UPI00103FEA559.870e-727.68uncharacterized protein LOC114361313 n=2 Tax=Ostri... [more]
A0A2H1WMK4_SPOFR2.220e-625.00SFRICE_021333 n=1 Tax=Spodoptera frugiperda TaxID=... [more]
A0A2H1VB05_SPOFR2.590e-629.89SFRICE_041671 (Fragment) n=1 Tax=Spodoptera frugip... [more]
A0A0J7K5G8_LASNI5.240e-626.02Retrovirus-related pol polyprotein from transposon... [more]
UPI00103F0D666.110e-631.11uncharacterized protein LOC114362197 n=1 Tax=Ostri... [more]
X1XSQ9_ACYPI1.710e-526.72CCHC-type domain-containing protein n=1 Tax=Acyrth... [more]
UPI00193D68982.020e-527.59uncharacterized protein LOC113006278 n=1 Tax=Solen... [more]
A0A2A4K3A2_HELVI4.410e-524.78CCHC-type domain-containing protein n=1 Tax=Heliot... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 2..111
e-value: 9.4E-15
score: 54.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig119600contigH-elongata_contig119600:1257..1664 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig119600.1510.1mRNA_H-elongata_contig119600.1510.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig119600 1257..1664 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig119600.1510.1 ID=prot_H-elongata_contig119600.1510.1|Name=mRNA_H-elongata_contig119600.1510.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=136bp
QEAESPGEAWSKLVQHYHASGLKERRRLIVDFYTMKMELDEHPRNFLLRV
DQMVKELKRVERPMDPKDVNIVILSGLTSQYDAEVRMLESLSDWTTLDWI
ERAVINQFNRLESEKSAAGSKAMFAGRGNDHGSNPP
back to top