mRNA_H-elongata_contig119453.1497.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig119453.1497.1 vs. uniprot
Match: A0A6H5L5Z3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5Z3_9PHAE) HSP 1 Score: 190 bits (483), Expect = 4.540e-59 Identity = 88/134 (65.67%), Postives = 106/134 (79.10%), Query Frame = 1
Query: 19 ADHSNKVNKAIHLACIWPILWTTLALMTHVPIGKLTPDILKSLPLREEAWNLHLGLGIVLVYVIVYCVMDPFAGGLASLLVITSYLTANLWMADGGSTALVGGVNVAGWLAQFYGHFVHEGRSPALLDNLFQVR 420
ADHSN+VNK IHL CIWPI+WT ALMT GKL ++L+ LPLR+EAWNLHLG +V+VY+ VY VMDPFAGG+ASL++ ++YLT+NLWMA GGS L ++ WLAQFYGH HEGR+PALLDNLFQ R
Sbjct: 15 ADHSNRVNKFIHLLCIWPIIWTGCALMTQCSFGKLPSEVLEQLPLRDEAWNLHLGTPVVMVYIFVYLVMDPFAGGVASLMMASTYLTSNLWMAGGGSARLATAAHIGCWLAQFYGHAAHEGRAPALLDNLFQAR 148
BLAST of mRNA_H-elongata_contig119453.1497.1 vs. uniprot
Match: D7FJ56_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ56_ECTSI) HSP 1 Score: 182 bits (462), Expect = 6.380e-56 Identity = 84/131 (64.12%), Postives = 101/131 (77.10%), Query Frame = 1
Query: 25 HSNKVNKAIHLACIWPILWTTLALMTHVPIGKLTPDILKSLPLREEAWNLHLGLGIVLVYVIVYCVMDPFAGGLASLLVITSYLTANLWMADGGSTALVGGVNVAGWLAQFYGHFVHEGRSPALLDNLFQV 417
HSN+VNK IHL CIWPI+WT ALMT GKL ++L+ LPLR+EAWNLHLG +V+VY+ VY VMDPFAGG+AS ++ ++YLT NLWMA GGS L ++ WLAQFYGH HEGR+PALLDNLFQ
Sbjct: 23 HSNRVNKFIHLLCIWPIIWTGCALMTQCSFGKLPAEVLEQLPLRDEAWNLHLGTPVVMVYIFVYLVMDPFAGGVASFMMASTYLTTNLWMAGGGSARLATAAHIGCWLAQFYGHAAHEGRAPALLDNLFQA 153
BLAST of mRNA_H-elongata_contig119453.1497.1 vs. uniprot
Match: A0A835ZKQ2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKQ2_9STRA) HSP 1 Score: 102 bits (254), Expect = 2.100e-24 Identity = 62/144 (43.06%), Postives = 82/144 (56.94%), Query Frame = 1
Query: 19 ADHSNKVNKAIHLACIWPILWTTLALMTHV-PIGKLTPDILKSLPLREEAWNLHLGLGIVLVYVIVYCVMDPFAGGLASLLVITSYLTANLWMA--------DGG--STALVGGVNVAGWLAQFYGHFVHEGRSPALLDNLFQV 417
A H N VN+AIH+ CIWPI+WT AL + P + ++ P +A LH+G I YV++Y +M+P G A+LLV+ L+AN + A D G + A V +V WLAQFYGH HE R PAL+DNLFQ
Sbjct: 18 AYHRNTVNEAIHMVCIWPIVWTMFALFRMLGPTAPVPHALVDMAPALGDALVLHIGWLIAAAYVLLYPLMEPRMGTAAALLVVCCLLSANQFAAWADRQPESDTGLSAAAYVAVAHVVCWLAQFYGHAAHEKRKPALMDNLFQA 161
BLAST of mRNA_H-elongata_contig119453.1497.1 vs. uniprot
Match: A0A4Y7T5X7_9AGAR (DUF962-domain-containing protein n=1 Tax=Coprinellus micaceus TaxID=71717 RepID=A0A4Y7T5X7_9AGAR) HSP 1 Score: 87.8 bits (216), Expect = 6.020e-19 Identity = 55/131 (41.98%), Postives = 73/131 (55.73%), Query Frame = 1
Query: 19 ADHSNKVNKAIHLACIWPILWTTLALMTHVPIGKLTPDILKSL-PLREEAWNLHLGLGIVLVYVIVYCVMDPFAGGLASLLVITSYLTANLWMADGGSTALVGGVNVAGWLAQFYGHFVHEGRSPALLDNL 408
A HSNKVN AIH+ C+ ILW+ AL+ P+ + P I L PL A L++G Y +++PFA L + S LTA + G + G ++V W+AQFYGH VHE R+PALLDNL
Sbjct: 16 AYHSNKVNVAIHITCVPLILWSAYALVAPFPVPEFFPKIHYVLSPLPPVAAALYIGY---------YFLLEPFAALLYVPQLTLSLLTATAFSYRGDHNLIAGALHVFTWIAQFYGHGVHEKRAPALLDNL 137
BLAST of mRNA_H-elongata_contig119453.1497.1 vs. uniprot
Match: A0A4Q2DMD9_9AGAR (Uncharacterized protein n=1 Tax=Candolleomyces aberdarensis TaxID=2316362 RepID=A0A4Q2DMD9_9AGAR) HSP 1 Score: 85.9 bits (211), Expect = 3.960e-18 Identity = 52/131 (39.69%), Postives = 74/131 (56.49%), Query Frame = 1
Query: 19 ADHSNKVNKAIHLACIWPILWTTLALMTHVPIGKLTPDILKSLPLREE-AWNLHLGLGIVLVYVIVYCVMDPFAGGLASLLVITSYLTANLWMADGGSTALVGGVNVAGWLAQFYGHFVHEGRSPALLDNL 408
A HSNKVN IH+ C+ ILW+ LAL + P+ P I P+ E ++L+ + +Y+ Y +++PFA L + S LTA + + GG++ W+AQFYGH VHE R+PALLDNL
Sbjct: 17 AYHSNKVNVLIHVICVPIILWSALALFSPFPVPAFFPKI--HYPINEYLVFDLNWPAVVASLYIGYYFLLEPFAALLYVPQLTLSLLTATAFSYRADHVLIAGGLHAFSWVAQFYGHGVHERRAPALLDNL 145
BLAST of mRNA_H-elongata_contig119453.1497.1 vs. uniprot
Match: A0A553PRT3_TIGCA (Uncharacterized protein n=1 Tax=Tigriopus californicus TaxID=6832 RepID=A0A553PRT3_TIGCA) HSP 1 Score: 85.1 bits (209), Expect = 9.080e-18 Identity = 57/147 (38.78%), Postives = 81/147 (55.10%), Query Frame = 1
Query: 25 HSNKVNKAIHLACIWPILWTTLALM--------THVPIGKLTPDILKSLPLREEAWNLHLGLGIVLVYVIVYCVMDPFAGGLASLLVITSY-----LTANLWMADG---GSTALVGGVNVAGWLAQFYGHFVHEGRSPALLDNLFQV 417
H+N+VN AIHL C+WPIL T + L+ TH+P+ P L++LP +A L+L L + ++Y++ Y M+P AGGL +L+V Y + + W G A V + W QF GH V EGR+PALLD+L Q
Sbjct: 21 HANRVNVAIHLVCVWPILATAMLLLQLSSYCFLTHLPM----PHALQNLPFGLQA-PLNLALVMAIIYIVSYFAMEPIAGGLGALMVAGLYFGTWKMVSEDWYVGGYPIWQAAWV--IFFLAWTFQFIGHGVFEGRAPALLDSLDQA 160
BLAST of mRNA_H-elongata_contig119453.1497.1 vs. uniprot
Match: A0A5C3L200_9AGAR (DUF962-domain-containing protein n=1 Tax=Coprinopsis marcescibilis TaxID=230819 RepID=A0A5C3L200_9AGAR) HSP 1 Score: 83.2 bits (204), Expect = 5.080e-17 Identity = 50/130 (38.46%), Postives = 72/130 (55.38%), Query Frame = 1
Query: 19 ADHSNKVNKAIHLACIWPILWTTLALMTHVPIGKLTPDILKSLPLREEAWNLHLGLGIVLVYVIVYCVMDPFAGGLASLLVITSYLTANLWMADGGSTALVGGVNVAGWLAQFYGHFVHEGRSPALLDNL 408
A HSNKVN IH+ C+ ILWT AL +P + PDI L + ++L+ + +Y+ Y +++P A L ++ S LTA + L G ++ W+AQFYGH +HE R+PALLDNL
Sbjct: 17 AYHSNKVNVLIHIICVPLILWTAFALTAPLPTLRFFPDIHYELH-KYLVFDLNWPAIVAALYIGYYLILEPVAAILYVPQMVLSVLTATAFSYRDDHVLLSGLLHAVSWIAQFYGHGIHEKRAPALLDNL 145
BLAST of mRNA_H-elongata_contig119453.1497.1 vs. uniprot
Match: W4GGH2_9STRA (Uncharacterized protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GGH2_9STRA) HSP 1 Score: 81.3 bits (199), Expect = 2.950e-16 Identity = 52/133 (39.10%), Postives = 78/133 (58.65%), Query Frame = 1
Query: 25 HSNKVNKAIHLACIWPILWTTLALM-THVPIGKLTPDILKSLPLREEAWNLHLGLGIVLVYVIVYCVMDPFAGGLASLLVITSYLTANLWMADGGSTA------LVGGVNVAGWLAQFYGHFVHEGRSPALLD 402
HS+ NK +HL CIWPIL + + L+ T P D+ ++L A +G VL+YV+ Y V+DP+AG LA+ L+++ Y+ +N+ +AD + L G++V W+ QF GH V E R+PALLD
Sbjct: 28 HSDPTNKTLHLLCIWPILLSAIFLLCTTAPFV----DVAQALHPYVVANAALVG---VLIYVLWYIVLDPYAGTLAAALIVSMYVWSNVVIADAVAATGESPWRLALGIHVTAWIIQFIGHGVFEKRAPALLD 153
BLAST of mRNA_H-elongata_contig119453.1497.1 vs. uniprot
Match: A0A8J2JI70_9HEXA (Hypothetical protein n=2 Tax=Allacma fusca TaxID=39272 RepID=A0A8J2JI70_9HEXA) HSP 1 Score: 80.9 bits (198), Expect = 3.200e-16 Identity = 53/139 (38.13%), Postives = 74/139 (53.24%), Query Frame = 1
Query: 25 HSNKVNKAIHLACIWPILWTTLALMTHVPIGKLTPDILKSLPLREEAWNLHLGLGIVLVYVIVYCVMDPFAGGLASLLVITSYLTANLWMADGGST--------ALVGGVNVAGWLAQFYGHFVHEGRSPALLDNLFQV 417
H +K+NK IH+ C+WPILW+ + + PI + PD L +L A L+L + L Y Y +M+ AG A+ LV S L + + + ALV ++V W+AQF GH EGR+PALLDNL Q
Sbjct: 17 HHDKINKLIHIVCVWPILWSAMVFCQYAPI--VAPDSLNNLV--SFAHPLNLAFIVALFYATCYILMEQKAGTFAAGLVFLSLLFSRSFFLTAEAKYGHPAWVIALV--IHVGCWIAQFVGHGKFEGRAPALLDNLVQA 149
BLAST of mRNA_H-elongata_contig119453.1497.1 vs. uniprot
Match: A0A3M7N857_9EURO (Uncharacterized protein (Fragment) n=1 Tax=Chaetothyriales sp. CBS 132003 TaxID=2249419 RepID=A0A3M7N857_9EURO) HSP 1 Score: 83.6 bits (205), Expect = 5.190e-16 Identity = 58/134 (43.28%), Postives = 77/134 (57.46%), Query Frame = 1
Query: 34 KVNKAIHLACIWPILWTTLALMTHVPIGKLTPDILKSLPLREEAWNLHLGLGIV--LVYVIVYCVMDPFAGGLASLLVITSYLTANLWMADGGSTALVG--GVNVAGWLAQFYGHFVHEGRSPALLDNLFQVRF 423
KVN AIH+ C+ IL T + L T+ G L P LP + L LG++ LVY ++Y +++P AGGL S+L++T N G TA G++VA W+AQF GH EGR+PALLDNLFQ F
Sbjct: 3 KVNIAIHITCVPVILLTAILLCTNT--GPLYP-----LPEYLQVPYLPPNLGVIVSLVYAVLYILLEPVAGGLLSVLLLTGTAYVNHLAGKYGMTANYWALGIHVASWIAQFIGHGKFEGRAPALLDNLFQAFF 129 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig119453.1497.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig119453.1497.1 >prot_H-elongata_contig119453.1497.1 ID=prot_H-elongata_contig119453.1497.1|Name=mRNA_H-elongata_contig119453.1497.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=141bp RVRVSTADHSNKVNKAIHLACIWPILWTTLALMTHVPIGKLTPDILKSLPback to top mRNA from alignment at H-elongata_contig119453:514..1244+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig119453.1497.1 ID=mRNA_H-elongata_contig119453.1497.1|Name=mRNA_H-elongata_contig119453.1497.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=731bp|location=Sequence derived from alignment at H-elongata_contig119453:514..1244+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig119453:514..1244+ >mRNA_H-elongata_contig119453.1497.1 ID=mRNA_H-elongata_contig119453.1497.1|Name=mRNA_H-elongata_contig119453.1497.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=846bp|location=Sequence derived from alignment at H-elongata_contig119453:514..1244+ (Himanthalia elongata Himel1 dioecious)back to top |