mRNA_H-elongata_contig11851.1429.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig11851.1429.1
Unique NamemRNA_H-elongata_contig11851.1429.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig11851.1429.1 vs. uniprot
Match: A0A8J2T2D7_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T2D7_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 3.550e-20
Identity = 61/171 (35.67%), Postives = 86/171 (50.29%), Query Frame = 3 
Query:   39 VKPNSRQHQPYRSADISREVYRLWRALDFQRVKDYCMLSNVYAESLARH--------GPVNFGRRKMNSSGGTNSTSNPGGNHGSNRRRICKSRRKKDPRLPKPPVSSFMCFSRHHRGILRSENREFGFSEIAKAIGLRWKAATVAERRPFDDLAAKDKTRYARELVEYKQ 527
            V+  S + QP+   ++S E+ R W+AL   + + Y +LS  YAE              P    +RK                            R KDPR PK   S++M FS+HHR +L+ EN    F ++ K +G  WKAAT  E++PF+DLAA+D+ RYAREL EYK+
Sbjct:   20 VEKESPKLQPH---EVSSEIARRWKALPADQSRAYSVLSATYAEQKKFQKDSPKVPPSPKPVKKRKE---------------------------RYKDPRAPKSATSAYMYFSKHHRTLLKRENASLTFGDLGKTVGAMWKAATPGEKKPFEDLAARDRARYARELEEYKK 160
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BLAST of mRNA_H-elongata_contig11851.1429.1 vs. uniprot
Match: A0A6H5JGF1_9PHAE (HMG box domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGF1_9PHAE)

HSP 1 Score: 96.3 bits (238), Expect = 1.140e-17
Identity = 47/86 (54.65%), Postives = 60/86 (69.77%), Query Frame = 3 
Query:  342 MCFSRHHRGILRSENREFGFSEIAKAIGLRWKAATVAERRPFDDLAAKDKTRYARELVEYKQWVRAEGSKGRKDEELATSAPAVAV 599
            M FSRHHR ILR++NRE  FS+I KA+G+ WK+AT  ++RPFDDL+A+DK RYAREL EYK W+  +        E+ T A   AV
Sbjct:    1 MWFSRHHRAILRTKNREMSFSDIGKAVGVLWKSATDEQKRPFDDLSAEDKARYARELAEYKAWLLLKQGSTENKGEVPTQADKAAV 86
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BLAST of mRNA_H-elongata_contig11851.1429.1 vs. uniprot
Match: A0A0L0V1A0_9BASI (HMG box domain-containing protein n=2 Tax=Puccinia striiformis TaxID=27350 RepID=A0A0L0V1A0_9BASI)

HSP 1 Score: 77.8 bits (190), Expect = 1.550e-13
Identity = 34/83 (40.96%), Postives = 58/83 (69.88%), Query Frame = 3 
Query:  279 RICKSRRKKDPRLPKPPVSSFMCFSRHHRGILRSENREFGFSEIAKAIGLRWKAATVAERRPFDDLAAKDKTRYARELVEYKQ 527
            ++ K +++KDP  PK P+S++M FS+  R  +++EN E  F EI + +GL+WK  T  E++P++D+AA+DK R+  E  EY++
Sbjct:   23 KVKKVKKEKDPNAPKRPLSAYMFFSQDWRERIKTENPEVSFGEIGRLLGLKWKGLTDEEKKPYEDMAARDKKRHEAEKAEYER 105
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BLAST of mRNA_H-elongata_contig11851.1429.1 vs. uniprot
Match: F0YAN0_AURAN (HMG box domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YAN0_AURAN)

HSP 1 Score: 76.6 bits (187), Expect = 2.060e-13
Identity = 33/64 (51.56%), Postives = 46/64 (71.88%), Query Frame = 3 
Query:  330 VSSFMCFSRHHRGILRSENREFGFSEIAKAIGLRWKAATVAERRPFDDLAAKDKTRYARELVEY 521
             S++M FS+HHR +L+ EN +  F ++ K +G  WKAAT  E++PF+DLAA D+TRY  EL EY
Sbjct:   20 TSAYMYFSKHHRLLLKRENSDLTFGDLGKTVGAMWKAATPQEKKPFEDLAAADRTRYNSELSEY 83
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BLAST of mRNA_H-elongata_contig11851.1429.1 vs. uniprot
Match: F4RQM9_MELLP (HMG box domain-containing protein (Fragment) n=1 Tax=Melampsora larici-populina (strain 98AG31 / pathotype 3-4-7) TaxID=747676 RepID=F4RQM9_MELLP)

HSP 1 Score: 74.3 bits (181), Expect = 1.300e-12
Identity = 32/78 (41.03%), Postives = 54/78 (69.23%), Query Frame = 3 
Query:  294 RRKKDPRLPKPPVSSFMCFSRHHRGILRSENREFGFSEIAKAIGLRWKAATVAERRPFDDLAAKDKTRYARELVEYKQ 527
            +R+KDP  PK P+S++M FS+  R  +++EN E  F EI + +GL+WK+    E++P++D+A +DK R+  E  EY++
Sbjct:    5 KREKDPNAPKRPLSAYMFFSQDWRERIKTENPEVSFGEIGRLLGLKWKSLGEEEKKPYEDMACRDKKRHETEKAEYER 82
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BLAST of mRNA_H-elongata_contig11851.1429.1 vs. uniprot
Match: A0A0C4F8T8_PUCT1 (HMG box domain-containing protein n=4 Tax=Puccinia TaxID=5296 RepID=A0A0C4F8T8_PUCT1)

HSP 1 Score: 74.3 bits (181), Expect = 2.620e-12
Identity = 31/78 (39.74%), Postives = 55/78 (70.51%), Query Frame = 3 
Query:  294 RRKKDPRLPKPPVSSFMCFSRHHRGILRSENREFGFSEIAKAIGLRWKAATVAERRPFDDLAAKDKTRYARELVEYKQ 527
            +++KDP  PK P+S++M FS+  R  +++EN +  F EI + +GL+WKA    E++P++D+A++DK R+  E  EY++
Sbjct:   29 KKEKDPNAPKRPLSAYMYFSQDWRERIKTENPDVSFGEIGRLLGLKWKALAEEEKKPYEDMASRDKKRHEAEKAEYER 106
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BLAST of mRNA_H-elongata_contig11851.1429.1 vs. uniprot
Match: A0A835XNY0_9CHLO (FACT complex subunit SSRP1 n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XNY0_9CHLO)

HSP 1 Score: 80.9 bits (198), Expect = 7.320e-12
Identity = 42/96 (43.75%), Postives = 56/96 (58.33%), Query Frame = 3 
Query:  288 KSRRKKDPRLPKPPVSSFMCFSRHHRGILRSENREFGFSEIAKAIGLRWKAATVAERRPFDDLAAKDKTRYARELVEYKQWVRAEGSKGRKDEELA 575
            K R+KKDP  PK  +S+FM FS   R  ++ EN    F E+ K +G RWKA    E+ PF+++AAKDK RYA  +  YK  V   G +  +D E A
Sbjct:  595 KERKKKDPNAPKKNLSAFMYFSNTSRDKVKQENPGIAFGEVGKLLGERWKAMGAEEKAPFEEMAAKDKVRYAEAMKAYKDKVAGAGKEAEEDGEEA 690
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BLAST of mRNA_H-elongata_contig11851.1429.1 vs. uniprot
Match: D7G1C1_ECTSI (HMG box domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1C1_ECTSI)

HSP 1 Score: 70.5 bits (171), Expect = 1.840e-11
Identity = 30/47 (63.83%), Postives = 39/47 (82.98%), Query Frame = 3 
Query:  342 MCFSRHHRGILRSENREFGFSEIAKAIGLRWKAATVAERRPFDDLAA 482
            M FSRHHR ILR++NRE  FS+I KA+G+ WK+AT  ++RPFDDL+A
Sbjct:    1 MWFSRHHRAILRTKNREMSFSDIGKAVGVLWKSATDEQKRPFDDLSA 47
[Close]
BLAST of mRNA_H-elongata_contig11851.1429.1 vs. uniprot
Match: A0A0S1MK77_PHAPC (HMG box domain-containing protein n=1 Tax=Phakopsora pachyrhizi TaxID=170000 RepID=A0A0S1MK77_PHAPC)

HSP 1 Score: 71.6 bits (174), Expect = 2.130e-11
Identity = 30/78 (38.46%), Postives = 54/78 (69.23%), Query Frame = 3 
Query:  288 KSRRKKDPRLPKPPVSSFMCFSRHHRGILRSENREFGFSEIAKAIGLRWKAATVAERRPFDDLAAKDKTRYARELVEY 521
            +++++KDP  PK P+S++M FS+  R  +++EN E  F EI + +G +WK+ +  E++P++D+A +DK R+  E  EY
Sbjct:   24 RTKKEKDPNAPKRPLSAYMYFSQDWRERIKAENPEVSFGEIGRLLGQKWKSLSDEEKKPYEDMAGRDKKRHEAEKAEY 101
[Close]
BLAST of mRNA_H-elongata_contig11851.1429.1 vs. uniprot
Match: M7X9L2_RHOT1 (Nucleosome binding protein (Nhp6a) n=6 Tax=Rhodosporidium toruloides TaxID=5286 RepID=M7X9L2_RHOT1)

HSP 1 Score: 72.4 bits (176), Expect = 2.630e-11
Identity = 32/76 (42.11%), Postives = 49/76 (64.47%), Query Frame = 3 
Query:  294 RRKKDPRLPKPPVSSFMCFSRHHRGILRSENREFGFSEIAKAIGLRWKAATVAERRPFDDLAAKDKTRYARELVEY 521
            R KKDP  PK P+S++M FS+  R +++ EN +  F EI K +G +WK     ER+P+++ A+ DK+RY +E   Y
Sbjct:   17 RAKKDPNAPKRPLSAYMHFSQDQRSVVKEENPDVTFGEIGKILGAKWKELPEDERKPYEEKASADKSRYEKEKAAY 92
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11851.1429.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8J2T2D7_9STRA3.550e-2035.67Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A6H5JGF1_9PHAE1.140e-1754.65HMG box domain-containing protein n=1 Tax=Ectocarp... [more]
A0A0L0V1A0_9BASI1.550e-1340.96HMG box domain-containing protein n=2 Tax=Puccinia... [more]
F0YAN0_AURAN2.060e-1351.56HMG box domain-containing protein (Fragment) n=1 T... [more]
F4RQM9_MELLP1.300e-1241.03HMG box domain-containing protein (Fragment) n=1 T... [more]
A0A0C4F8T8_PUCT12.620e-1239.74HMG box domain-containing protein n=4 Tax=Puccinia... [more]
A0A835XNY0_9CHLO7.320e-1243.75FACT complex subunit SSRP1 n=1 Tax=Edaphochlamys d... [more]
D7G1C1_ECTSI1.840e-1163.83HMG box domain-containing protein n=1 Tax=Ectocarp... [more]
A0A0S1MK77_PHAPC2.130e-1138.46HMG box domain-containing protein n=1 Tax=Phakopso... [more]
M7X9L2_RHOT12.630e-1142.11Nucleosome binding protein (Nhp6a) n=6 Tax=Rhodosp... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig11851contigH-elongata_contig11851:3567..7074 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score77.8
Seed ortholog evalue1e-11
Seed eggNOG ortholog41875.XP_007509716.1
KEGG koko:K09272
GOsGO:0000003,GO:0000228,GO:0000741,GO:0000785,GO:0000790,GO:0000791,GO:0003006,GO:0003674,GO:0003700,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005719,GO:0006355,GO:0006996,GO:0006997,GO:0007275,GO:0008023,GO:0008150,GO:0009553,GO:0009559,GO:0009561,GO:0009791,GO:0009889,GO:0009987,GO:0010197,GO:0010228,GO:0010468,GO:0010556,GO:0016043,GO:0019219,GO:0019222,GO:0022414,GO:0030154,GO:0031323,GO:0031326,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032991,GO:0035101,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0048229,GO:0048284,GO:0048608,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0061458,GO:0065007,GO:0070013,GO:0071840,GO:0080090,GO:0140110,GO:1903506,GO:2000112,GO:2001141
EggNOG free text desc.Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of the nucleosome following the passage of RNA polymerase II
EggNOG OGs34HEP@3041,37I94@33090,COG5165@1,KOG0526@2759
COG Functional cat.B
Best tax levelChlorophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionHigh mobility group domain protein
Ec32 orthologEc-00_005550.1
Exons3
Model size2896
Cds size948
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig11851.1429.1prot_H-elongata_contig11851.1429.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig11851 3713..5214 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929692.7278535-UTR-H-elongata_contig11851:3566..37121622929692.7278535-UTR-H-elongata_contig11851:3566..3712Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig11851 3567..3712 +
1691679120.9927828-UTR-H-elongata_contig11851:3566..37121691679120.9927828-UTR-H-elongata_contig11851:3566..3712Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig11851 3567..3712 +
1622929692.7749002-UTR-H-elongata_contig11851:5214..63081622929692.7749002-UTR-H-elongata_contig11851:5214..6308Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig11851 5215..6308 +
1691679121.0337572-UTR-H-elongata_contig11851:5214..63081691679121.0337572-UTR-H-elongata_contig11851:5214..6308Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig11851 5215..6308 +
1622929692.7897892-UTR-H-elongata_contig11851:6366..70741622929692.7897892-UTR-H-elongata_contig11851:6366..7074Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig11851 6367..7074 +
1691679121.0432944-UTR-H-elongata_contig11851:6366..70741691679121.0432944-UTR-H-elongata_contig11851:6366..7074Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig11851 6367..7074 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929692.7458608-CDS-H-elongata_contig11851:3712..40511622929692.7458608-CDS-H-elongata_contig11851:3712..4051Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11851 3713..4051 +
1691679121.0074415-CDS-H-elongata_contig11851:3712..40511691679121.0074415-CDS-H-elongata_contig11851:3712..4051Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11851 3713..4051 +
1622929692.762577-CDS-H-elongata_contig11851:4605..52141622929692.762577-CDS-H-elongata_contig11851:4605..5214Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11851 4606..5214 +
1691679121.0237887-CDS-H-elongata_contig11851:4605..52141691679121.0237887-CDS-H-elongata_contig11851:4605..5214Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11851 4606..5214 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig11851.1429.1

>prot_H-elongata_contig11851.1429.1 ID=prot_H-elongata_contig11851.1429.1|Name=mRNA_H-elongata_contig11851.1429.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=316bp
MLSNVYAESLARHGPVNFGRRKMNSSGGTNSTSNPGGNHGSNRRRICKSR
RKKDPRLPKPPVSSFMCFSRHHRGILRSENREFGFSEIAKAIGLRWKAAT
VAERRPFDDLAAKDKTRYARELVEYKQWVRAEGSKGRKDEELATSAPAVA
VAPVTSTAGATSVETQTTKSDDMPPAVMTAVDGTGLPTPTKAFQTLPQKR
SATEIGVSWSTAASITPQSHHQDVSTSSHSTALSAPCTKKQRMENVLSNA
GAPSEVAVDVPVSLESLPLMTSEGGEKKARVAPKAVATAPEPALDVGAVS
GSDAFPAQQPELRQK*
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mRNA from alignment at H-elongata_contig11851:3567..7074+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig11851.1429.1 ID=mRNA_H-elongata_contig11851.1429.1|Name=mRNA_H-elongata_contig11851.1429.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3508bp|location=Sequence derived from alignment at H-elongata_contig11851:3567..7074+ (Himanthalia elongata Himel1 dioecious)
TTTACCTCGAGCACCACGATGCCGTCAAGAACCGGCTGGTGAAACCCAAC
AGTCGACAGCATCAGCCTTACCGCTCTGCAGACATCAGCAGAGAGGTATA
CCGCCTTTGGCGCGCCCTCGACTTTCAGAGGGTAAAGGACTACTGCATGT
TGTCCAATGTTTACGCCGAGAGCCTGGCGAGGCATGGACCTGTGAACTTC
GGACGGAGAAAAATGAACAGCTCAGGAGGTACAAACAGTACCAGCAATCC
CGGTGGAAACCACGGCAGCAACAGACGTCGAATCTGCAAGTCCAGGCGCA
AGAAAGACCCCCGACTTCCTAAGCCTCCCGTGAGTTCATTTATGTGCTTC
TCCAGGCACCATCGTGGCATCCTCAGGAGCGAGAACCGGGAGTTCGGCTT
CAGCGAGATCGCCAAGGCTATCGGGTTGCGTTGGAAGGCGGCCACCGTGG
CGGAGAGAAGGCCATTTGACGATCTGGCGGCGAAGGTCGGTACAGATAGA
AAATACCCAACCACACCGCTCGGACACTCTCGTCCAAACCCGAAGTGAAA
CATGACTATCCGATTGTGTACACGCCGTTTGCTTTCGATATCGCCGCCTC
TGCTTCATTCGCAGCGTTCATGGTCCGAAGTGACTTATAAAAATAATACA
CTTGAGGCAACAAGGGCCAGGAAGATAGGCCCCAAAAACAAATATCGTCA
TTTTTTGGTTGTTACCGCTCCGAAGGCGGACGATCCCGCTCATCGCTCGC
GCCTGCTGTCGCGGGAAATAGATGGTCGCATCTCAGATGCACTCAAGATG
ACGATGGTCATGGATAGGATGGACATTATGAAGGAACGATCGCTGGGATT
TGCCAGTTGAAACTTACTCTCTTCGTGCGCTGTATTCACCCTATTGTTGA
TGCATAAAGTATAGGAAGCCATTCTCAATCGACCAAGCCACCCGTTTGTC
CCCTGCGCCTGTTCTGACGCCGCTTCCATGACATCGGTTTGTGGTTTGTA
TTGTTTACGGCTTGAACTTGTGTTATTATGTTTCTCCAGGATAAGACGAG
ATACGCTCGTGAGCTCGTGGAGTACAAACAGTGGGTACGGGCCGAAGGGT
CGAAGGGGCGGAAGGACGAAGAGCTGGCGACGTCCGCGCCGGCTGTAGCA
GTGGCGCCAGTGACGTCGACAGCCGGCGCGACCTCCGTGGAGACACAAAC
GACGAAAAGCGATGATATGCCGCCGGCAGTGATGACAGCGGTCGATGGTA
CTGGTCTACCGACACCGACCAAAGCCTTCCAGACGCTCCCTCAGAAGCGG
AGCGCCACGGAAATCGGAGTGTCGTGGTCCACCGCCGCGTCGATCACGCC
TCAATCTCACCACCAGGATGTGTCGACCTCCTCCCACTCAACGGCTTTAT
CGGCGCCTTGTACCAAGAAGCAACGAATGGAAAATGTTTTATCTAATGCC
GGCGCCCCGAGCGAGGTCGCTGTGGACGTGCCTGTGTCACTTGAATCGTT
GCCGCTGATGACGTCCGAGGGGGGCGAGAAGAAGGCGCGGGTGGCTCCGA
AAGCAGTGGCGACGGCCCCCGAGCCGGCGCTTGACGTCGGGGCGGTATCC
GGCAGCGATGCCTTCCCCGCCCAGCAGCCAGAACTGCGACAGAAGTAAAG
GTCAGTCGGAGAACATTAAGGACGTGGCTTCCACCCCGCCACGTTTAGTG
AAAACGTGATGAGATATAGTGAGGGGGGAGGGGGGGAATATGCGACAATC
CTGACCTCGGGGATATTCCGCGCGCTGGCGTCGAAAGAAAGCGTTTTTCG
AATGGACAGGGCTACTCGTTTTACTTGTGCCGCGGTCCGTCGGTCAGCCG
CCTGAGGCTGGTTGAAGTCGGTTTAGGGTTTCATAGTGACGGACACTCGT
CGTGGTGCGTGTGTCGTGGTCCTGATTAGAATTGGGGTGCGTCGCACGGG
AGTAAACGCACTCTTGAGCATGCGCACTTCCGATGACAAATAAATGCTCT
AGGTTTTAGGGTGCGTATTCCGCGGGGTCGGCGAGTGGTGAGGTCTGGAG
GGGCGGGGGGGTATTTAACGAAAGCAGTCCACGGTCGAAATCGGGTTTTT
TGTTTTTTGTTTTGAAACAAAAAATTAGAAGGGTTCTCGCAGAACCAGCG
CGGCGCGCGATCATGGCTGCTTGTCCCCCGGGGCTCCCTTCCCTCTCTAC
CATCGAGCTTGTGTTTGCACTTTATACTTCAACAGGAGTTCACACGATGG
TCTGTAAAAATACTCAGGCGTGGATTATAACCGAATGTGCTGCCTTAGGT
GCATTTTTAGTTTTGGAACCCGTACTTCGTCTTCGAGCGATCGGTCTACT
CTGACCCGCGCCCGTATTTTAGTAAGCCTGAGTCAAGAGTGGAGACGATG
TCACGGCTAGTGGCCTTACGCGCGCGCGCTCCTATCAGGGTTATCGCGTC
GCGCTGAGTCGCTGAGAGGAAATACTTGAAATCGTCGGTCGCTCCCCGTA
GGGAATGATCCTCATGAATCCTAGTGTAGAGCTCCTTACGACCGCCTTTC
TTTCAGTATGCACGAAATAAAAAGGCGTGGAAGTTGAACGGAAATCGTAT
ATCATATTTATAGTGGTGTATCTTGTATAAACTCCGCGTGCCTCGTATTA
CACCTTGCGGAGGGCGGCGGTTTTCGCTCTCTCGTGGAAAGAGAGGTTCG
TAGCGCGTTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGTGTGTTTG
TGATTGTATATGTTTGATTGGAGTGTTTTTGATTGCTTGATTACTTTTTT
GTGTATTTGCTTCCTTCGTTGGTTGATTGTGTACGAAGGCCGAAAGCATG
GGGATGAGTGCCGCATATATCAGTACAGTATTAATATGTAGTGGTAGCGT
GTGATAGACACCCATGCTTGTGTGAAAAAAGCGGTGCGGGAGAGGGGCTG
GAAACGTTGTAGCTCTAACGGCACGAGGACGAAGAGGAGACATGATTTTT
CGGCGTCAAATGTGTGATGGTGGCGTATCGACCATACATAGCGAACCAAC
CAGCACGAACACGATTGCTTGGGGCTATCCGTTCCTTGGGTCCTTCCCGT
CACGTTCGGACATTCTATACTGCATGACGTAGTTTCAGCCCCGGCTTTCT
CGGCAGCGATCAATTTTGTCATGAAATGTTCCGCTCCTTATTCCGCCGCC
GTGTACCAGATAACACCGTATTTGTTATAGCTTATAGATGAAAAAGGCTA
TAATATTCCGCCCCAGTGCCATCTCGGTCGAAGTCCTGGTCGCGAATGAC
GGTGCACGCTCTATCGCTGCTCTGTATTTTGTATCCCCTAACCCCTAACT
TTTGATATGGGTCCCCCGTTTCATCTTCGTCGTCGGCAAATATATTTGAA
TCGTTACGCCTTTCTTCGGCCCTTTTTGTGGGAAGTATACGGTAGGCACG
ATACACCGGGGGGGGGTAAAGCGCGTATGGCCATCACACGGGCGAGGCAA
GAAACCAC
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Coding sequence (CDS) from alignment at H-elongata_contig11851:3567..7074+

>mRNA_H-elongata_contig11851.1429.1 ID=mRNA_H-elongata_contig11851.1429.1|Name=mRNA_H-elongata_contig11851.1429.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1896bp|location=Sequence derived from alignment at H-elongata_contig11851:3567..7074+ (Himanthalia elongata Himel1 dioecious)
ATGTTGTCCAATGTTTACGCCGAGAGCCTGGCGAGGCATGGACCTGTGAA
CTTCGGACGGAGAAAAATGAACAGCTCAGGAGGTACAAACAGTACCAGCA
ATCCCGGTGGAAACCACGGCAGCAACAGACGTCGAATCTGCAAGTCCAGG
CGCAAGAAAGACCCCCGACTTCCTAAGCCTCCCGTGAGTTCATTTATGTG
CTTCTCCAGGCACCATCGTGGCATCCTCAGGAGCGAGAACCGGGAGTTCG
GCTTCAGCGAGATCGCCAAGGCTATCGGGTTGCGTTGGAAGGCGGCCACC
GTGGCGGAGAGAAGGCCATTTGACGATCTGGCGGCGAAGATGTTGTCCAA
TGTTTACGCCGAGAGCCTGGCGAGGCATGGACCTGTGAACTTCGGACGGA
GAAAAATGAACAGCTCAGGAGGTACAAACAGTACCAGCAATCCCGGTGGA
AACCACGGCAGCAACAGACGTCGAATCTGCAAGTCCAGGCGCAAGAAAGA
CCCCCGACTTCCTAAGCCTCCCGTGAGTTCATTTATGTGCTTCTCCAGGC
ACCATCGTGGCATCCTCAGGAGCGAGAACCGGGAGTTCGGCTTCAGCGAG
ATCGCCAAGGCTATCGGGTTGCGTTGGAAGGCGGCCACCGTGGCGGAGAG
AAGGCCATTTGACGATCTGGCGGCGAAGGATAAGACGAGATACGCTCGTG
AGCTCGTGGAGTACAAACAGTGGGTACGGGCCGAAGGGTCGAAGGGGCGG
AAGGACGAAGAGCTGGCGACGTCCGCGCCGGCTGTAGCAGTGGCGCCAGT
GACGTCGACAGCCGGCGCGACCTCCGTGGAGACACAAACGACGAAAAGCG
ATGATATGCCGCCGGCAGTGATGACAGCGGTCGATGGTACTGGTCTACCG
ACACCGACCAAAGCCTTCCAGACGCTCCCTCAGAAGCGGAGCGCCACGGA
AATCGGAGTGTCGTGGTCCACCGCCGCGTCGATCACGCCTCAATCTCACC
ACCAGGATGTGTCGACCTCCTCCCACTCAACGGCTTTATCGGCGCCTTGT
ACCAAGAAGCAACGAATGGAAAATGTTTTATCTAATGCCGGCGCCCCGAG
CGAGGTCGCTGTGGACGTGCCTGTGTCACTTGAATCGTTGCCGCTGATGA
CGTCCGAGGGGGGCGAGAAGAAGGCGCGGGTGGCTCCGAAAGCAGTGGCG
ACGGCCCCCGAGCCGGCGCTTGACGTCGGGGCGGTATCCGGCAGCGATGC
CTTCCCCGCCCAGCAGCCAGAACTGCGACAGAAGTAAGATAAGACGAGAT
ACGCTCGTGAGCTCGTGGAGTACAAACAGTGGGTACGGGCCGAAGGGTCG
AAGGGGCGGAAGGACGAAGAGCTGGCGACGTCCGCGCCGGCTGTAGCAGT
GGCGCCAGTGACGTCGACAGCCGGCGCGACCTCCGTGGAGACACAAACGA
CGAAAAGCGATGATATGCCGCCGGCAGTGATGACAGCGGTCGATGGTACT
GGTCTACCGACACCGACCAAAGCCTTCCAGACGCTCCCTCAGAAGCGGAG
CGCCACGGAAATCGGAGTGTCGTGGTCCACCGCCGCGTCGATCACGCCTC
AATCTCACCACCAGGATGTGTCGACCTCCTCCCACTCAACGGCTTTATCG
GCGCCTTGTACCAAGAAGCAACGAATGGAAAATGTTTTATCTAATGCCGG
CGCCCCGAGCGAGGTCGCTGTGGACGTGCCTGTGTCACTTGAATCGTTGC
CGCTGATGACGTCCGAGGGGGGCGAGAAGAAGGCGCGGGTGGCTCCGAAA
GCAGTGGCGACGGCCCCCGAGCCGGCGCTTGACGTCGGGGCGGTATCCGG
CAGCGATGCCTTCCCCGCCCAGCAGCCAGAACTGCGACAGAAGTAA
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