mRNA_H-elongata_contig114748.1175.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig114748.1175.1 vs. uniprot
Match: D8LTB4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTB4_ECTSI) HSP 1 Score: 201 bits (510), Expect = 1.720e-61 Identity = 97/122 (79.51%), Postives = 110/122 (90.16%), Query Frame = 1
Query: 1 QLARKEAMVEELKKMSIAVQQDAANDQHYEVSADFYRLVLGPRLKYSSGLWAKADSTFEESEVAMLEMYCERARLRDGMRIVDLGCGWGSLTLFLAKKYPNSSIASISNSASQKELIERKCK 366
QLARKEA++EELKKM IA QQDAAN+QHYEV+A FY L LGPRLKYSSG W K+DSTFEESEVAMLEMYC+RA+L DGM+IVDLGCGWGSLTLFLA+KYPN+SI SISNSASQK I+ +C+
Sbjct: 53 QLARKEALIEELKKMPIATQQDAANEQHYEVNAAFYHLALGPRLKYSSGFWPKSDSTFEESEVAMLEMYCDRAKLEDGMKIVDLGCGWGSLTLFLAEKYPNASITSISNSASQKTYIDGQCR 174
BLAST of mRNA_H-elongata_contig114748.1175.1 vs. uniprot
Match: A0A835YH28_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YH28_9STRA) HSP 1 Score: 178 bits (451), Expect = 1.260e-52 Identity = 88/121 (72.73%), Postives = 100/121 (82.64%), Query Frame = 1
Query: 1 QLARKEAMVEELKKMSIAVQQDAANDQHYEVSADFYRLVLGPRLKYSSGLWAKADSTFEESEVAMLEMYCERARLRDGMRIVDLGCGWGSLTLFLAKKYPNSSIASISNSASQKELIERKC 363
Q A KEAMV+EL+ M IAVQ DAAN QHYEVSA FY++VLGPRLKYSSGLW + D+TF ESE AMLE YCERA+L DGMRIVDLGCGWGSLTLFLA +YP + + +ISNSASQK I+ C
Sbjct: 53 QAAAKEAMVKELQSMPIAVQTDAANAQHYEVSAAFYKIVLGPRLKYSSGLWPRPDTTFAESETAMLECYCERAQLADGMRIVDLGCGWGSLTLFLAARYPAARVTAISNSASQKAFIDAAC 173
BLAST of mRNA_H-elongata_contig114748.1175.1 vs. uniprot
Match: A0A7S4N4U2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N4U2_9STRA) HSP 1 Score: 157 bits (396), Expect = 4.360e-45 Identity = 79/116 (68.10%), Postives = 94/116 (81.03%), Query Frame = 1
Query: 7 ARKEAMVEELKKM-SIAVQQDAANDQHYEVSADFYRLVLGPRLKYSSGLWAKADSTFEESEVAMLEMYCERARLRDGMRIVDLGCGWGSLTLFLAKKYPNSSIASISNSASQKELI 351
A K A+V+ELK +IA+ D AN+QHYEV A FY + LGPR KYSSGLWA ++TFEESEVAMLE+YCERA ++DGM+IVDLGCGWGSLTL LA++YPN I SISNS SQ+E I
Sbjct: 105 ATKMAIVQELKNTKTIAINTDEANEQHYEVPAAFYDMCLGPRKKYSSGLWADKNTTFEESEVAMLELYCERAGVKDGMKIVDLGCGWGSLTLHLAERYPNCKITSISNSHSQREYI 220
BLAST of mRNA_H-elongata_contig114748.1175.1 vs. uniprot
Match: A0A7S1G3N7_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1G3N7_9STRA) HSP 1 Score: 159 bits (402), Expect = 9.710e-45 Identity = 79/120 (65.83%), Postives = 91/120 (75.83%), Query Frame = 1
Query: 7 ARKEAMVEELKKMSIAVQQDAANDQHYEVSADFYRLVLGPRLKYSSGLWAKADSTFEESEVAMLEMYCERARLRDGMRIVDLGCGWGSLTLFLAKKYPNSSIASISNSASQKELIERKCK 366
A K ++VEEL+ + +AV AN+QHYEV A FY L LGPR KYSSGLW +TFEESE AML++YCERA L DGMRIVDLGCGWGSLTL LA+KYP S I +SNSASQ+E I R K
Sbjct: 114 ATKMSIVEELRSLPVAVATREANEQHYEVPAAFYDLSLGPRKKYSSGLWTSPSTTFEESEAAMLDLYCERAELEDGMRIVDLGCGWGSLTLHLAEKYPRSQITGVSNSASQREYILRTAK 233
BLAST of mRNA_H-elongata_contig114748.1175.1 vs. uniprot
Match: A0A7S1CZY2_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CZY2_CYCTE) HSP 1 Score: 154 bits (390), Expect = 4.370e-44 Identity = 74/116 (63.79%), Postives = 91/116 (78.45%), Query Frame = 1
Query: 19 AMVEELKKMSIAVQQDAANDQHYEVSADFYRLVLGPRLKYSSGLWAKADSTFEESEVAMLEMYCERARLRDGMRIVDLGCGWGSLTLFLAKKYPNSSIASISNSASQKELIERKCK 366
A+V++L M IA+ DAAN+QHYEV A FY L LGPR KYSSGLW + D+TFE+SE+AML++YC+RA ++DGM IVDLGCGWGSLTL L +K+PN I SISNS SQ+E I K
Sbjct: 2 AIVKQLHTMPIAIDTDAANEQHYEVPAKFYDLSLGPRKKYSSGLWPEPDTTFEQSEIAMLDLYCQRANVQDGMNIVDLGCGWGSLTLHLIEKFPNCKITSISNSNSQREYIMATAK 117
BLAST of mRNA_H-elongata_contig114748.1175.1 vs. uniprot
Match: A0A482S8K2_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S8K2_9ARCH) HSP 1 Score: 150 bits (378), Expect = 1.650e-43 Identity = 74/120 (61.67%), Postives = 90/120 (75.00%), Query Frame = 1
Query: 7 ARKEAMVEELKKMSIAVQQDAANDQHYEVSADFYRLVLGPRLKYSSGLWAKADSTFEESEVAMLEMYCERARLRDGMRIVDLGCGWGSLTLFLAKKYPNSSIASISNSASQKELIERKCK 366
A K A V+EL M IAV Q ANDQHYEV +FY+LVLGP +KYSSG W +T +SEV MLE YCERA+L DGM+++DLGCGWGS+TL++A KYP +SI SISNS SQ+E I K +
Sbjct: 39 AFKSAFVKELLTMPIAVAQTKANDQHYEVPDEFYQLVLGPCMKYSSGFWPTPSTTLAQSEVHMLEKYCERAQLFDGMKLIDLGCGWGSVTLYMAAKYPKASIVSISNSNSQREYIMEKAR 158
BLAST of mRNA_H-elongata_contig114748.1175.1 vs. uniprot
Match: A0A6U3YXE6_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3YXE6_9STRA) HSP 1 Score: 154 bits (388), Expect = 9.930e-43 Identity = 75/117 (64.10%), Postives = 92/117 (78.63%), Query Frame = 1
Query: 1 QLARKEAMVEELKKMSIAVQQDAANDQHYEVSADFYRLVLGPRLKYSSGLWAKADSTFEESEVAMLEMYCERARLRDGMRIVDLGCGWGSLTLFLAKKYPNSSIASISNSASQKELI 351
+L K +V LK M +A++ DAAN+QHYEV A FY L LGPR KYSSGLW +++TFEESE AML YCERA+++DGM IVDLGCGWGSLTL+LA+K+PN+ I ISNS SQ+E I
Sbjct: 105 ELQTKMEIVSSLKTMPVAIETDAANEQHYEVPAAFYELCLGPRKKYSSGLWPFSNTTFEESEDAMLAKYCERAQVKDGMNIVDLGCGWGSLTLYLAEKFPNAQITGISNSHSQREHI 221
BLAST of mRNA_H-elongata_contig114748.1175.1 vs. uniprot
Match: A0A7S3DNC6_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DNC6_9STRA) HSP 1 Score: 152 bits (385), Expect = 2.310e-42 Identity = 77/122 (63.11%), Postives = 89/122 (72.95%), Query Frame = 1
Query: 1 QLARKEAMVEELKKMSIAVQQDAANDQHYEVSADFYRLVLGPRLKYSSGLWAKADSTFEESEVAMLEMYCERARLRDGMRIVDLGCGWGSLTLFLAKKYPNSSIASISNSASQKELIERKCK 366
+L K +V +LK M IA+ D AN+QHYEV A FY L LGPR KYSSGLW D+TFEESEVAMLE YC+ A + DGM IVDLGCGWGSLTL LA++YPN+ I ISNS SQ+E I K
Sbjct: 96 ELKNKTEIVHKLKTMPIAIATDEANEQHYEVPAKFYDLCLGPRKKYSSGLWPNKDTTFEESEVAMLEHYCQLAGVEDGMSIVDLGCGWGSLTLHLAERYPNAKITGISNSHSQREYILNTAK 217
BLAST of mRNA_H-elongata_contig114748.1175.1 vs. uniprot
Match: W7TQD4_9STRA (Methyltransferase type 11 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQD4_9STRA) HSP 1 Score: 150 bits (380), Expect = 1.820e-41 Identity = 68/121 (56.20%), Postives = 92/121 (76.03%), Query Frame = 1
Query: 4 LARKEAMVEELKKMSIAVQQDAANDQHYEVSADFYRLVLGPRLKYSSGLWAKADSTFEESEVAMLEMYCERARLRDGMRIVDLGCGWGSLTLFLAKKYPNSSIASISNSASQKELIERKCK 366
+ K+A V+ELK + IAV AAN+QHYE+ YRL+LGP +KYS G W KAD++F +SE MLE+YC RA L DGM ++DLGCGWGS++L++A KYP S + ++SNSA+Q+E IE +CK
Sbjct: 59 MTAKQAYVDELKTLPIAVSTGAANEQHYEIPTALYRLMLGPWMKYSCGYWPKADTSFVDSETEMLELYCRRAELEDGMTVLDLGCGWGSVSLYVAGKYPRSQVYALSNSATQREYIEEECK 179
BLAST of mRNA_H-elongata_contig114748.1175.1 vs. uniprot
Match: A0A448YYR6_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YYR6_9STRA) HSP 1 Score: 150 bits (379), Expect = 1.850e-41 Identity = 76/117 (64.96%), Postives = 88/117 (75.21%), Query Frame = 1
Query: 1 QLARKEAMVEELKKMSIAVQQDAANDQHYEVSADFYRLVLGPRLKYSSGLWAKADSTFEESEVAMLEMYCERARLRDGMRIVDLGCGWGSLTLFLAKKYPNSSIASISNSASQKELI 351
+L +K +VE+LK M IA+ D AN+QHYEV A FY L LGPR KYSSG W TFEESEVAMLE YCE A + DGM+IVDLGCGWGSLTL LA+ YPN+ I ISNS+SQ+E I
Sbjct: 98 ELDKKLKIVEKLKTMPIAIATDEANEQHYEVPAKFYDLCLGPRKKYSSGWWPTPTCTFEESEVAMLEKYCEHAGVVDGMKIVDLGCGWGSLTLHLAENYPNAKITGISNSSSQREYI 214 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig114748.1175.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig114748.1175.1 >prot_H-elongata_contig114748.1175.1 ID=prot_H-elongata_contig114748.1175.1|Name=mRNA_H-elongata_contig114748.1175.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=117bp MVEELKKMSIAVQQDAANDQHYEVSADFYRLVLGPRLKYSSGLWAKADSTback to top mRNA from alignment at H-elongata_contig114748:552..1796+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig114748.1175.1 ID=mRNA_H-elongata_contig114748.1175.1|Name=mRNA_H-elongata_contig114748.1175.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1245bp|location=Sequence derived from alignment at H-elongata_contig114748:552..1796+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig114748:552..1796+ >mRNA_H-elongata_contig114748.1175.1 ID=mRNA_H-elongata_contig114748.1175.1|Name=mRNA_H-elongata_contig114748.1175.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=702bp|location=Sequence derived from alignment at H-elongata_contig114748:552..1796+ (Himanthalia elongata Himel1 dioecious)back to top |