mRNA_H-elongata_contig114111.1127.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig114111.1127.1 vs. uniprot
Match: D7FJM2_ECTSI (GMP_PDE_delta domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJM2_ECTSI) HSP 1 Score: 184 bits (467), Expect = 7.090e-58 Identity = 94/125 (75.20%), Postives = 100/125 (80.00%), Query Frame = 1
Query: 1 MYHRELKATVPGEILRCSAVSREINFTSRQEISQFRLEQRVFLRGACIEGDTSWIQKICSPEFEWFFDFGFVIPGSTNSWQHIIESAGEDKMLAAEELSGRMTIETTFLDGKVTLFKTLFRVFYE 375
MYH ELKATVP IL CSAVSREINFTS++EI QFRLEQRVFL GACIE EWFFDFGFVIPGSTNSWQ IESAGED+MLAAE+LSGRMTIETTFLDG+ LFKTL R+FYE
Sbjct: 22 MYHHELKATVPRRILECSAVSREINFTSQEEIRQFRLEQRVFLAGACIE--------------EWFFDFGFVIPGSTNSWQQTIESAGEDRMLAAEDLSGRMTIETTFLDGRTMLFKTLVRIFYE 132
BLAST of mRNA_H-elongata_contig114111.1127.1 vs. uniprot
Match: A0A835Z4X9_9STRA (Delta subunit of GMP phosphodiesterase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4X9_9STRA) HSP 1 Score: 147 bits (371), Expect = 2.910e-43 Identity = 75/124 (60.48%), Postives = 88/124 (70.97%), Query Frame = 1
Query: 1 MYHRELKATVPGEILRCSAVSREINFTSRQEISQFRLEQRVFLRGACIEGDTSWIQKICSPEFEWFFDFGFVIPGSTNSWQHIIESAGEDKMLAAEELSGRMTIETTFLDGKVTLFKTLFRVFY 372
M E++A VP EIL C AVSRE+NFTS++EI QFRLEQR+FLRGAC+E EWFFDFGFVIPGSTNSWQ IE+A + M ELSG++TIET+F DGK + KTL RVFY
Sbjct: 22 MLREEMQARVPKEILECRAVSRELNFTSQEEIRQFRLEQRIFLRGACLE--------------EWFFDFGFVIPGSTNSWQQTIEAAAPEDMRHPAELSGKVTIETSFYDGKTLIAKTLVRVFY 131
BLAST of mRNA_H-elongata_contig114111.1127.1 vs. uniprot
Match: A0A6A3LLC5_9STRA (GMP_PDE_delta domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3LLC5_9STRA) HSP 1 Score: 141 bits (356), Expect = 6.600e-40 Identity = 70/124 (56.45%), Postives = 91/124 (73.39%), Query Frame = 1
Query: 1 MYHRELKATVPGEILRCSAVSREINFTSRQEISQFRLEQRVFLRGACIEGDTSWIQKICSPEFEWFFDFGFVIPGSTNSWQHIIESAGEDKMLAAEELSGRMTIETTFLDGKVTLFKTLFRVFY 372
+Y E KA +P +IL+CSAVSREINF+S +EISQFRLEQRVFL G+CIE EW F+FG+VIPGSTN+WQ IESAG + ML E +SG++TIET F DG++ + KT++R++Y
Sbjct: 106 IYRVEQKARLPMDILKCSAVSREINFSSAEEISQFRLEQRVFLDGSCIE--------------EWLFNFGYVIPGSTNTWQQTIESAGPENMLDPEMMSGKLTIETAFYDGQLPIAKTVYRIYY 215
BLAST of mRNA_H-elongata_contig114111.1127.1 vs. uniprot
Match: G4Z211_PHYSP (GMP_PDE_delta domain-containing protein n=14 Tax=Phytophthora TaxID=4783 RepID=G4Z211_PHYSP) HSP 1 Score: 141 bits (356), Expect = 6.790e-40 Identity = 70/124 (56.45%), Postives = 91/124 (73.39%), Query Frame = 1
Query: 1 MYHRELKATVPGEILRCSAVSREINFTSRQEISQFRLEQRVFLRGACIEGDTSWIQKICSPEFEWFFDFGFVIPGSTNSWQHIIESAGEDKMLAAEELSGRMTIETTFLDGKVTLFKTLFRVFY 372
+Y E KA +P +IL+CSAVSREINF+S +EISQFRLEQRVFL G+CIE EW F+FG+VIPGSTN+WQ IESAG + ML E +SG++TIET F DG++ + KT++R++Y
Sbjct: 107 IYRVEQKARLPVDILKCSAVSREINFSSAEEISQFRLEQRVFLDGSCIE--------------EWLFNFGYVIPGSTNTWQQTIESAGPENMLDPEMMSGKLTIETAFYDGQLPIAKTVYRIYY 216
BLAST of mRNA_H-elongata_contig114111.1127.1 vs. uniprot
Match: A0A8K1C6Q4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C6Q4_PYTOL) HSP 1 Score: 140 bits (353), Expect = 2.150e-39 Identity = 69/120 (57.50%), Postives = 87/120 (72.50%), Query Frame = 1
Query: 13 ELKATVPGEILRCSAVSREINFTSRQEISQFRLEQRVFLRGACIEGDTSWIQKICSPEFEWFFDFGFVIPGSTNSWQHIIESAGEDKMLAAEELSGRMTIETTFLDGKVTLFKTLFRVFY 372
E +A +P IL+CSAVSRE+NF+S +EI+QFRLEQRVF +G+CIE EW F FGFVIPGSTNSWQ IESAG D ML E +SG++TIET F DG++ + KT++R+FY
Sbjct: 115 EQEAHIPSSILKCSAVSREVNFSSTEEITQFRLEQRVFFQGSCIE--------------EWLFTFGFVIPGSTNSWQQTIESAGPDNMLDPEVMSGKLTIETGFYDGQMPIAKTVYRIFY 220
BLAST of mRNA_H-elongata_contig114111.1127.1 vs. uniprot
Match: A0A5D6XY42_9STRA (GMP_PDE_delta domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XY42_9STRA) HSP 1 Score: 140 bits (353), Expect = 2.540e-39 Identity = 68/124 (54.84%), Postives = 89/124 (71.77%), Query Frame = 1
Query: 1 MYHRELKATVPGEILRCSAVSREINFTSRQEISQFRLEQRVFLRGACIEGDTSWIQKICSPEFEWFFDFGFVIPGSTNSWQHIIESAGEDKMLAAEELSGRMTIETTFLDGKVTLFKTLFRVFY 372
+Y E +A +P IL+CSAVSREINF+S +EI+QFRLEQRVFL G+CIE EW F+FG+VIPGSTN+WQ IESAG + ML E +SG++TIET F +G+ + KT++R+FY
Sbjct: 117 VYTAEQEARIPASILKCSAVSREINFSSAEEITQFRLEQRVFLAGSCIE--------------EWLFEFGYVIPGSTNTWQQTIESAGAENMLDPESISGKLTIETAFYEGQSAIAKTVYRIFY 226
BLAST of mRNA_H-elongata_contig114111.1127.1 vs. uniprot
Match: A0A067D6C1_SAPPC (GMP_PDE_delta domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067D6C1_SAPPC) HSP 1 Score: 140 bits (353), Expect = 2.610e-39 Identity = 70/125 (56.00%), Postives = 87/125 (69.60%), Query Frame = 1
Query: 1 MYHRELKATVPGEILRCSAVSREINFTSRQEISQFRLEQRVFLRGACIEGDTSWIQKICSPEFEWFFDFGFVIPGSTNSWQHIIESAGEDKMLAAEELSGRMTIETTFLDGKVTLFKTLFRVFYE 375
MY +E +A VP IL+C AVSREINF+S++EI FRLEQRVFL G C+E EW F FG+VIPGSTNSWQ IESAG D ML A+ +SG++TIET F D + + KT+FR++YE
Sbjct: 118 MYEKEQRAVVPKAILQCLAVSREINFSSKEEIQNFRLEQRVFLHGKCLE--------------EWLFAFGYVIPGSTNSWQQTIESAGADNMLPADVISGKITIETGFYDADMLIAKTVFRIYYE 228
BLAST of mRNA_H-elongata_contig114111.1127.1 vs. uniprot
Match: H3G6U4_PHYRM (GMP_PDE_delta domain-containing protein n=2 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G6U4_PHYRM) HSP 1 Score: 135 bits (339), Expect = 9.120e-39 Identity = 66/117 (56.41%), Postives = 87/117 (74.36%), Query Frame = 1
Query: 22 ATVPGEILRCSAVSREINFTSRQEISQFRLEQRVFLRGACIEGDTSWIQKICSPEFEWFFDFGFVIPGSTNSWQHIIESAGEDKMLAAEELSGRMTIETTFLDGKVTLFKTLFRVFY 372
A +P +IL+CSAVSREINF+S +EIS+FRLEQRVFL G+CIE EW F+FG+VIPGSTN+WQ IESAG + ML E +SG++TIET F DG++ + KT++R++Y
Sbjct: 1 ARLPVDILKCSAVSREINFSSAEEISRFRLEQRVFLDGSCIE--------------EWIFNFGYVIPGSTNTWQQTIESAGPENMLDPEMMSGKLTIETAFYDGQLPIAKTVYRIYY 103
BLAST of mRNA_H-elongata_contig114111.1127.1 vs. uniprot
Match: A0A0P1B3K5_PLAHL (Retinal rod rhodopsin-sensitive cgmp 3-cyclic phosphodiesterase subunit delta n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B3K5_PLAHL) HSP 1 Score: 136 bits (343), Expect = 6.230e-38 Identity = 66/124 (53.23%), Postives = 89/124 (71.77%), Query Frame = 1
Query: 1 MYHRELKATVPGEILRCSAVSREINFTSRQEISQFRLEQRVFLRGACIEGDTSWIQKICSPEFEWFFDFGFVIPGSTNSWQHIIESAGEDKMLAAEELSGRMTIETTFLDGKVTLFKTLFRVFY 372
+YH E KA +P +IL+CSA+SREINF+S +EIS+FRLEQRVFL G+CIE EW F FG+VIPGSTN+WQ IES + ML E ++G++TIET F DG++ + KT++R++Y
Sbjct: 107 VYHVEQKAHLPKDILKCSAISREINFSSAEEISKFRLEQRVFLAGSCIE--------------EWIFSFGYVIPGSTNTWQQTIESDEPENMLDPEAMNGKLTIETAFYDGQLPIAKTVYRIYY 216
BLAST of mRNA_H-elongata_contig114111.1127.1 vs. uniprot
Match: A0A485LJ79_9STRA (Aste57867_22049 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LJ79_9STRA) HSP 1 Score: 136 bits (342), Expect = 1.190e-37 Identity = 66/125 (52.80%), Postives = 85/125 (68.00%), Query Frame = 1
Query: 1 MYHRELKATVPGEILRCSAVSREINFTSRQEISQFRLEQRVFLRGACIEGDTSWIQKICSPEFEWFFDFGFVIPGSTNSWQHIIESAGEDKMLAAEELSGRMTIETTFLDGKVTLFKTLFRVFYE 375
MY RE KA +P IL+CS+VSREINF+S +E+ +FRLEQRVF G C+E EW F FG+VIP STN+WQ I++AG D ML A+ +SG +TIET F D V + KT++R+FYE
Sbjct: 118 MYEREQKAVIPKAILKCSSVSREINFSSLEEVKEFRLEQRVFFNGQCLE--------------EWLFSFGYVIPNSTNTWQQTIDAAGPDAMLPADLISGNITIETGFYDADVVIAKTVYRIFYE 228 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig114111.1127.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig114111.1127.1 >prot_H-elongata_contig114111.1127.1 ID=prot_H-elongata_contig114111.1127.1|Name=mRNA_H-elongata_contig114111.1127.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=127bp MYHRELKATVPGEILRCSAVSREINFTSRQEISQFRLEQRVFLRGACIEGback to top mRNA from alignment at H-elongata_contig114111:855..1784- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig114111.1127.1 ID=mRNA_H-elongata_contig114111.1127.1|Name=mRNA_H-elongata_contig114111.1127.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=930bp|location=Sequence derived from alignment at H-elongata_contig114111:855..1784- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig114111:855..1784- >mRNA_H-elongata_contig114111.1127.1 ID=mRNA_H-elongata_contig114111.1127.1|Name=mRNA_H-elongata_contig114111.1127.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=762bp|location=Sequence derived from alignment at H-elongata_contig114111:855..1784- (Himanthalia elongata Himel1 dioecious)back to top |