mRNA_H-elongata_contig112122.986.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig112122.986.1 vs. uniprot
Match: A0A401GYH9_9APHY (Uncharacterized protein n=6 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GYH9_9APHY) HSP 1 Score: 136 bits (343), Expect = 3.010e-34 Identity = 64/158 (40.51%), Postives = 99/158 (62.66%), Query Frame = 1
Query: 1 PTTMGEAQASSEWPQWERAIAREMDGQTAQGVWQVV*RPKGKTVLGTRVVFKRKIDKDGKIDKYKCRLVAQGFRQAKGIHYEESSSPTRAQDSIRMVLSMIAALDWEARQLDVGMVYLEADVKEEIYVELPEAYRDSKKQVGLLKKAMYGLVHAGLLW 474
P ++ EAQAS EWP+WE+A+ E D G W++ PK + +G + VF+RK +K+G++ KYK RLVAQG+ Q G+ + E+ +P +SIR +L++ +WE Q+DV YL D++EEIY+ PE + D ++ L+K +YGL +G W
Sbjct: 907 PRSLAEAQASPEWPEWEKAVKAEYDQLQGMGTWELQDLPKDRNAVGCKWVFQRKTNKEGQVVKYKARLVAQGYSQIPGMDFLETFAPVVRLESIRAILALAVVNNWEIGQMDVKGAYLNGDLQEEIYMRQPEGFDDGSGRICRLRKTLYGLKQSGREW 1064
BLAST of mRNA_H-elongata_contig112122.986.1 vs. uniprot
Match: A0A1M2V8C6_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2V8C6_TRAPU) HSP 1 Score: 133 bits (334), Expect = 4.920e-33 Identity = 70/161 (43.48%), Postives = 97/161 (60.25%), Query Frame = 1
Query: 1 PTTMGEAQASSEWPQWERAIAREMDGQTAQGVWQVV*RPKGKTVLGTRVVFKRKIDKDGKIDKYKCRLVAQGFRQAKGIHYEESSSPTRAQDSIRMVLSMIAALDWEARQLDVGMVYLEADVKEEIYVELPE--AYRDSKKQVGLLKKAMYGLVHAGLLWY 477
PT++ EAQ + +WP+WE AI EMD A + +V RP G V+G+R+VF RK D DG I + K R+VAQGF Q G+ Y E+ +P S+R++L++ A W QLDV YL D+ EEIY+ P A + + V L+K++YGL AG WY
Sbjct: 988 PTSLREAQEAPDWPKWEEAITVEMDNLRAHSTYDLVVRPVGAHVIGSRLVFHRKRDADGSIKQCKVRVVAQGFGQIPGVDYNETFAPVAKSSSLRIMLALAARFSWPLIQLDVKSAYLNGDLDEEIYMRQPPGTAAQGEEHLVCRLRKSLYGLKQAGRAWY 1148
BLAST of mRNA_H-elongata_contig112122.986.1 vs. uniprot
Match: A0A5K1K0E1_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ganoderma boninense TaxID=34458 RepID=A0A5K1K0E1_9APHY) HSP 1 Score: 129 bits (325), Expect = 7.490e-32 Identity = 68/161 (42.24%), Postives = 98/161 (60.87%), Query Frame = 1
Query: 1 PTTMGEAQASSEWPQWERAIAREMDGQTAQGVWQVV*RPKGKTVLGTRVVFKRKIDKDGKIDKYKCRLVAQGFRQAKGIHYEESSSPTRAQDSIRMVLSMIAALDWEARQLDVGMVYLEADVKEEIYVELPE--AYRDSKKQVGLLKKAMYGLVHAGLLWY 477
P ++ EAQAS +WPQWERAI EM+ A G + +V +P G V+G+++VF RK + +G + + K R+VAQGF Q GI + E+ +P S+R+++++ A W QLDV YL D+ EEIY+ P A + V LKK++YGL AG WY
Sbjct: 322 PLSLREAQASPDWPQWERAIEVEMENLRAHGTYDLVVKPPGAHVIGSKLVFHRKRNAEGAVTQCKVRVVAQGFAQIPGIDFNETFAPVAKPSSLRVMIALAARFGWPMIQLDVKSAYLNGDLDEEIYMRQPPGTAAAGEEHLVCRLKKSLYGLKQAGRAWY 482
BLAST of mRNA_H-elongata_contig112122.986.1 vs. uniprot
Match: A0A5C3E5T1_9BASI (Uncharacterized protein n=2 Tax=Ustilago trichophora TaxID=86804 RepID=A0A5C3E5T1_9BASI) HSP 1 Score: 129 bits (325), Expect = 7.910e-32 Identity = 65/159 (40.88%), Postives = 96/159 (60.38%), Query Frame = 1
Query: 1 PTTMGEAQASSEWPQWERAIAREMDGQTAQGVWQVV*RPKGKTVLGTRVVFKRKIDKDGKIDKYKCRLVAQGFRQAKGIHYEESSSPTRAQDSIRMVLSMIAALDWEARQLDVGMVYLEADVKEEIYVELPEAYRDSKKQVGLLKKAMYGLVHAGLLWY 477
P T+ EA+ +WP WE AI +E+ + G W + P G+ +G++ VFK K+ DG +DKYK RLVAQGF Q G+ Y+E+ +P ++R+++++ A W A Q+DV YL +++EEIY+ P Y + K V L KA+YGL AG WY
Sbjct: 830 PKTIEEAKRRPDWPHWETAIKKELASLSENGTWTLEDLPPGRRAVGSKWVFKIKLKADGTVDKYKARLVAQGFTQQHGVDYDETFAPVLKFATLRLLIALAAQEGWLAHQMDVITAYLNGNLEEEIYMRAPPGYAEGDK-VCRLCKALYGLKQAGRTWY 987
BLAST of mRNA_H-elongata_contig112122.986.1 vs. uniprot
Match: A0A1M2V3W8_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2V3W8_TRAPU) HSP 1 Score: 129 bits (324), Expect = 1.040e-31 Identity = 67/158 (42.41%), Postives = 95/158 (60.13%), Query Frame = 1
Query: 1 PTTMGEAQASSEWPQWERAIAREMDGQTAQGVWQVV*RPKGKTVLGTRVVFKRKIDKDGKIDKYKCRLVAQGFRQAKGIHYEESSSPTRAQDSIRMVLSMIAALDWEARQLDVGMVYLEADVKEEIYVELPEAYRDSKKQVGLLKKAMYGLVHAGLLW 474
P T+ EAQA+ EWP+W+RA+ E+ G + P G+ +G R V++ K D DG+I +YK RLVAQGF QA G+ Y E+ +P DS+R++L++ A + E Q DV YL AD+ EEIY+ P Y + + L+KA+YGL AG W
Sbjct: 15 PRTLSEAQAAPEWPEWKRAMDDEIAQLRKLGTYAPADLPAGRKPIGCRWVYRLKRDSDGRIVRYKARLVAQGFSQAPGLDYFETFAPVIRTDSLRLLLAIAAERNMELAQFDVVGAYLNADLDEEIYMRQPPGYEEGSSPIVRLRKALYGLKQAGXQW 172
BLAST of mRNA_H-elongata_contig112122.986.1 vs. uniprot
Match: A0A0C2WN23_AMAMK (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Amanita muscaria (strain Koide BX008) TaxID=946122 RepID=A0A0C2WN23_AMAMK) HSP 1 Score: 127 bits (320), Expect = 3.750e-31 Identity = 62/159 (38.99%), Postives = 100/159 (62.89%), Query Frame = 1
Query: 1 PTTMGEAQASSEWPQWERAIAREMDGQTAQGVWQVV*RPKGKTVLGTRVVFKRKIDKDGKIDKYKCRLVAQGFRQAKGIHYEESSSPTRAQDSIRMVLSMIAALDWEARQLDVGMVYLEADVKEEIYVELPEAYRDSKKQVGLLKKAMYGLVHAGLLWY 477
P + +A + + +W +A E++ GV++ V RP+ + ++G++ VFK K DG+++KYK RLVAQGF Q +GI Y E+ +P +SIR++L++ A DWE Q+DV +L +++EEIY+++P ++ S V LKKA+YGL A WY
Sbjct: 995 PLSYVDAMSQEDAAEWRKACEAELEMFKQLGVFEEVPRPRDRKIIGSKWVFKTKTGPDGQVEKYKARLVAQGFSQVEGIDYNETFAPVTKSNSIRLLLALAARHDWEIHQMDVKSAFLNGELEEEIYMKVPPGHKASADAVWRLKKALYGLKQASREWY 1153
BLAST of mRNA_H-elongata_contig112122.986.1 vs. uniprot
Match: A0A177U1E5_9BASI (Integrase catalytic domain-containing protein n=2 Tax=Tilletia TaxID=13289 RepID=A0A177U1E5_9BASI) HSP 1 Score: 126 bits (317), Expect = 9.380e-31 Identity = 61/162 (37.65%), Postives = 93/162 (57.41%), Query Frame = 1
Query: 1 PTTMGEAQASSEWPQWERAIAREMDGQTAQGVWQVV*RPKGKTVLGTRVVFKRKIDKDGKIDKYKCRLVAQGFRQAKGIHYEESSSPTRAQDSIRMVLSMIAALDWEARQLDVGMVYLEADVKEEIYVELPEAYRDS----KKQVGLLKKAMYGLVHAGLLW 474
P T EA+ S+W +W +A+ +MD W +V P G+ +G+R V+K K+D++GK D++K RLVAQGF Q G+ Y E+ +P DS+R++L++ A W Q+DV YL D++EE+Y+ P Y K V L+ +YGL +G W
Sbjct: 732 PATYAEARRRSDWEKWNKAMDEQMDALVGMHTWDLVQLPPGRKAIGSRWVYKLKLDEEGKADRWKARLVAQGFTQVAGVDYFETFAPVARLDSLRVILALAAHFGWVIHQVDVVTAYLNGDLEEEVYIRQPPGYEKGGSRRKNMVCKLRLPLYGLKQSGRQW 893
BLAST of mRNA_H-elongata_contig112122.986.1 vs. uniprot
Match: A0A401GQU1_9APHY (Uncharacterized protein n=3 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GQU1_9APHY) HSP 1 Score: 125 bits (313), Expect = 3.280e-30 Identity = 64/161 (39.75%), Postives = 101/161 (62.73%), Query Frame = 1
Query: 1 PTTMGEAQASSEWPQWERAIAREMDGQTAQGVWQVV*RPKGKTVLGTRVVFKRKIDKDGKIDKYKCRLVAQGFRQAKGIHYEESSSPTRAQDSIRMVLSMIAALDWEARQLDVGMVYLEADVKEEIYVELP--EAYRDSKKQVGLLKKAMYGLVHAGLLWY 477
P ++ EA S +WPQW++AI +EM + +V P+ V+G++ VF+ K + +GKI+ YK RLVAQGF Q GI + ++ +P SIR++L++ A DW+ Q+DV YL AD++EEI+++ P +A R + V LL+ A+YGL +G W+
Sbjct: 960 PRSLEEAMQSPDWPQWQKAIEKEMRNLRDHHTYDLVEPPENTNVVGSKFVFRIKRNANGKIESYKARLVAQGFSQIPGIDFNDTFAPVAKLASIRIILALAARHDWDVHQMDVKGAYLNADLEEEIFMKQPPGQAKRGKEHWVCLLRHAIYGLKQSGRQWF 1120
BLAST of mRNA_H-elongata_contig112122.986.1 vs. uniprot
Match: A0A2G8RTP0_9APHY (Transcription factor n=1 Tax=Ganoderma sinense ZZ0214-1 TaxID=1077348 RepID=A0A2G8RTP0_9APHY) HSP 1 Score: 124 bits (311), Expect = 6.100e-30 Identity = 62/161 (38.51%), Postives = 100/161 (62.11%), Query Frame = 1
Query: 1 PTTMGEAQASSEWPQWERAIAREMDGQTAQGVWQVV*RPKGKTVLGTRVVFKRKIDKDGKIDKYKCRLVAQGFRQAKGIHYEESSSPTRAQDSIRMVLSMIAALDWEARQLDVGMVYLEADVKEEIYVELPE--AYRDSKKQVGLLKKAMYGLVHAGLLWY 477
P T+ EAQ + +W +WE+AI+ EM+ A G +++V +P G V+G+++VF RK + +G + ++K R+VAQGF Q GI ++++ +P S+R+++++ A W QLDV YL ++ E IY+ P A + V LLKK++YGL AG WY
Sbjct: 1000 PRTLREAQEAPDWVEWEKAISVEMENLKAHGTYELVAKPHGAHVIGSKLVFHRKRNAEGAVTQHKVRVVAQGFAQVPGIEFDQTFAPVAKPSSLRLMIALAARFGWPMIQLDVKSAYLNGELDEVIYMRQPPGTAAHGEEHLVCLLKKSLYGLKQAGRSWY 1160
BLAST of mRNA_H-elongata_contig112122.986.1 vs. uniprot
Match: A0A0A9Y7J8_LYGHE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9Y7J8_LYGHE) HSP 1 Score: 116 bits (290), Expect = 8.130e-30 Identity = 61/167 (36.53%), Postives = 96/167 (57.49%), Query Frame = 1
Query: 1 PTTMGEAQASSEWPQWERAIAREMDGQTAQGVWQVV*RPKGKTVLGTRVVFKRKIDKDGKIDKYKCRLVAQGFRQAKGIHYEESSSPTRAQDSIRMVLSMIAALDWEARQLDVGMVYLEADVKEEIYVELPEAY--------RDSKKQVGLLKKAMYGLVHAGLLWY 477
P T +A S W++A+ E + W +V RP+GKTV+G+R VF+ K+ DG +++ K RLVA+GF Q G HY E+ + SIR V+++ A + E QLD YL +++EEIY+E+P+ +D + +V ++KA+YGL +G +WY
Sbjct: 17 PMTPKQALESPYAEDWKKAMLEEYNSLEKNKTWTLVDRPEGKTVVGSRWVFRTKLKADGTVERRKARLVAKGFTQIPGTHYNETYTSVARLSSIRFVIALAAERNLELEQLDFTCAYLNGEIEEEIYMEVPKEIETILGRKTQDRENKVSRIQKALYGLKQSGRMWY 183 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig112122.986.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig112122.986.1 >prot_H-elongata_contig112122.986.1 ID=prot_H-elongata_contig112122.986.1|Name=mRNA_H-elongata_contig112122.986.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=64bp MVLSMIAALDWEARQLDVGMVYLEADVKEEIYVELPEAYRDSKKQVGLLKback to top mRNA from alignment at H-elongata_contig112122:631..1107+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig112122.986.1 ID=mRNA_H-elongata_contig112122.986.1|Name=mRNA_H-elongata_contig112122.986.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=477bp|location=Sequence derived from alignment at H-elongata_contig112122:631..1107+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig112122:631..1107+ >mRNA_H-elongata_contig112122.986.1 ID=mRNA_H-elongata_contig112122.986.1|Name=mRNA_H-elongata_contig112122.986.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=384bp|location=Sequence derived from alignment at H-elongata_contig112122:631..1107+ (Himanthalia elongata Himel1 dioecious)back to top |