mRNA_H-elongata_contig112074.980.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig112074.980.1 vs. uniprot
Match: D7FTC4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTC4_ECTSI) HSP 1 Score: 99.8 bits (247), Expect = 5.980e-23 Identity = 46/61 (75.41%), Postives = 54/61 (88.52%), Query Frame = 1
Query: 16 NSLGQ--TDAELRLYCAFSFPAVVLTIGQDRWGELRDAFSALLRDPSWSVRKTLSYSLHEV 192
S+G DAELRLYCAFSFPAVV+TIG DRW ELR++F+AL+RDPSWSVRKTLS+SLHE+
Sbjct: 310 ESMGDPVADAELRLYCAFSFPAVVVTIGPDRWHELRESFAALIRDPSWSVRKTLSFSLHEI 370
BLAST of mRNA_H-elongata_contig112074.980.1 vs. uniprot
Match: A0A7S1CBG0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CBG0_9STRA) HSP 1 Score: 75.1 bits (183), Expect = 2.800e-14 Identity = 36/53 (67.92%), Postives = 40/53 (75.47%), Query Frame = 1
Query: 34 DAELRLYCAFSFPAVVLTIGQDRWGELRDAFSALLRDPSWSVRKTLSYSLHEV 192
D +L LYCAFSFPAV LT+G DRW ELR F AL RD VR+TLS+SLHEV
Sbjct: 327 DGDLSLYCAFSFPAVALTLGPDRWPELRALFLALSRDVQRKVRRTLSHSLHEV 379
BLAST of mRNA_H-elongata_contig112074.980.1 vs. uniprot
Match: L8GSJ6_ACACA (Protein phosphatase 4 regulatory subunit 1, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GSJ6_ACACA) HSP 1 Score: 73.9 bits (180), Expect = 7.090e-14 Identity = 30/53 (56.60%), Postives = 42/53 (79.25%), Query Frame = 1
Query: 34 DAELRLYCAFSFPAVVLTIGQDRWGELRDAFSALLRDPSWSVRKTLSYSLHEV 192
DAE+ YCAF FPAV+ TIG+DRWGE++ + AL++D W VR+ L+++LHEV
Sbjct: 300 DAEIVNYCAFDFPAVIYTIGRDRWGEVKATYEALVKDLQWKVRRPLAHALHEV 352
BLAST of mRNA_H-elongata_contig112074.980.1 vs. uniprot
Match: A0A024UKY7_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UKY7_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 4.620e-13 Identity = 29/57 (50.88%), Postives = 42/57 (73.68%), Query Frame = 1
Query: 22 LGQTDAELRLYCAFSFPAVVLTIGQDRWGELRDAFSALLRDPSWSVRKTLSYSLHEV 192
LG +++++ +CAF++PAV T+G +WG+L F AL RD W VR+TLSYSLHE+
Sbjct: 327 LGGAESDIKFHCAFNYPAVTTTLGVHQWGKLAAGFDALARDGFWKVRRTLSYSLHEM 383
BLAST of mRNA_H-elongata_contig112074.980.1 vs. uniprot
Match: A0A151Z420_9MYCE (Protein phosphatase 4 regulatory subunit 1 n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151Z420_9MYCE) HSP 1 Score: 71.6 bits (174), Expect = 4.620e-13 Identity = 29/59 (49.15%), Postives = 45/59 (76.27%), Query Frame = 1
Query: 16 NSLGQTDAELRLYCAFSFPAVVLTIGQDRWGELRDAFSALLRDPSWSVRKTLSYSLHEV 192
+S+ D++L CAF+FPAV++TIGQ RW EL+D + L+ D +W VR++LS+S+HE+
Sbjct: 330 SSIKFPDSDLITRCAFNFPAVLMTIGQARWNELKDTYITLVSDTNWKVRRSLSHSIHEI 388
BLAST of mRNA_H-elongata_contig112074.980.1 vs. uniprot
Match: A0A7S3GLY1_9EUKA (Hypothetical protein n=3 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3GLY1_9EUKA) HSP 1 Score: 70.9 bits (172), Expect = 8.620e-13 Identity = 31/53 (58.49%), Postives = 41/53 (77.36%), Query Frame = 1
Query: 34 DAELRLYCAFSFPAVVLTIGQDRWGELRDAFSALLRDPSWSVRKTLSYSLHEV 192
D +L YCA+SFPAVVL++G RW EL DAF AL +D + VR++L++SLHEV
Sbjct: 343 DGDLSYYCAYSFPAVVLSVGARRWSELCDAFMALAKDIQYKVRRSLAFSLHEV 395
BLAST of mRNA_H-elongata_contig112074.980.1 vs. uniprot
Match: W4G8B7_9STRA (Uncharacterized protein n=10 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G8B7_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 2.200e-12 Identity = 28/57 (49.12%), Postives = 40/57 (70.18%), Query Frame = 1
Query: 22 LGQTDAELRLYCAFSFPAVVLTIGQDRWGELRDAFSALLRDPSWSVRKTLSYSLHEV 192
LG +A+++ +CA+++PAV T+G WG+L F AL D W VR+TLSYSLHE+
Sbjct: 327 LGGAEADIKFHCAYNYPAVAATVGPTLWGQLAAGFDALTHDGFWKVRRTLSYSLHEM 383
BLAST of mRNA_H-elongata_contig112074.980.1 vs. uniprot
Match: A0A397VAV1_9GLOM (Armadillo-type protein n=1 Tax=Gigaspora rosea TaxID=44941 RepID=A0A397VAV1_9GLOM) HSP 1 Score: 68.9 bits (167), Expect = 4.090e-12 Identity = 30/59 (50.85%), Postives = 42/59 (71.19%), Query Frame = 1
Query: 16 NSLGQTDAELRLYCAFSFPAVVLTIGQDRWGELRDAFSALLRDPSWSVRKTLSYSLHEV 192
N+LGQ D E + CAF+FPAVVLT+G+ W +L+D + L RD VR++L+ SLHE+
Sbjct: 329 NNLGQRDPERPVICAFNFPAVVLTLGESSWDDLKDTYIPLTRDMQIKVRRSLACSLHEI 387
BLAST of mRNA_H-elongata_contig112074.980.1 vs. uniprot
Match: L1IMG2_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IMG2_GUITC) HSP 1 Score: 68.9 bits (167), Expect = 4.090e-12 Identity = 26/53 (49.06%), Postives = 41/53 (77.36%), Query Frame = 1
Query: 34 DAELRLYCAFSFPAVVLTIGQDRWGELRDAFSALLRDPSWSVRKTLSYSLHEV 192
D +L +CA++FPAVV+T+G++ W L++A+ L+ D W VR+TLSYS+HE+
Sbjct: 242 DHDLPTFCAYNFPAVVMTVGRENWVHLQEAYHELINDIQWKVRRTLSYSIHEI 294
BLAST of mRNA_H-elongata_contig112074.980.1 vs. uniprot
Match: A0A6H5I5H2_9HYME (Uncharacterized protein n=1 Tax=Trichogramma brassicae TaxID=86971 RepID=A0A6H5I5H2_9HYME) HSP 1 Score: 68.6 bits (166), Expect = 5.610e-12 Identity = 33/64 (51.56%), Postives = 43/64 (67.19%), Query Frame = 1
Query: 1 LPLLCNSLGQTDAELRLYCAFSFPAVVLTIGQDRWGELRDAFSALLRDPSWSVRKTLSYSLHEV 192
LPL N LG +L +CAFSFPAVVLT+G+D W L+DA+ L +W VR TL+ S+HE+
Sbjct: 331 LPLNDNELG---GDLDYHCAFSFPAVVLTLGKDNWHRLKDAYQRLAGAVAWKVRSTLASSIHEI 391 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig112074.980.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig112074.980.1 >prot_H-elongata_contig112074.980.1 ID=prot_H-elongata_contig112074.980.1|Name=mRNA_H-elongata_contig112074.980.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=64bp LPLLCNSLGQTDAELRLYCAFSFPAVVLTIGQDRWGELRDAFSALLRDPSback to top mRNA from alignment at H-elongata_contig112074:1683..1874- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig112074.980.1 ID=mRNA_H-elongata_contig112074.980.1|Name=mRNA_H-elongata_contig112074.980.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=192bp|location=Sequence derived from alignment at H-elongata_contig112074:1683..1874- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig112074:1683..1874- >mRNA_H-elongata_contig112074.980.1 ID=mRNA_H-elongata_contig112074.980.1|Name=mRNA_H-elongata_contig112074.980.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=384bp|location=Sequence derived from alignment at H-elongata_contig112074:1683..1874- (Himanthalia elongata Himel1 dioecious)back to top |