mRNA_H-elongata_contig11164.949.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig11164.949.1 vs. uniprot
Match: D8LCC7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCC7_ECTSI) HSP 1 Score: 397 bits (1020), Expect = 2.070e-126 Identity = 208/412 (50.49%), Postives = 263/412 (63.83%), Query Frame = 1
Query: 16 QEDVYPKGPSVQFYKMFLEEDVRVQLANYAALAIIEWDVLVATDQSFEKLYNAAFESTEDFWVKGSNLEGTNFHVTAASNDMWHVLGHINGNAIYKNNDPGFTEFVDYTRSRWGYKYPYDVALWATISDFPYSWPLWQRFSNKFVTTNLISNVGYEHVDKGAVADAVAGGSLFIHGSMVDEGSMASSKAAVTSRRSLRAKVDEG----------------KDLA------------CTMACGG-VGAELPVGS-----------STVCD-ATCTKR------GRFGGYLCGAGNSVKFGAMCRLCFNDIEEARKAERRLTDGK---------HVIMCDTMRPPAAVDCKDECALKKDTVCDEACGTGLYGDYNCSWRNLGAKCRSCFDNMEAALKADEAAKRHGGRVIMCDT 1083
QE+VYPKGPSVQFYK+FLE+ ++ +L + A+A+IEWDVLVA D+SFEKLY AAF+ E FWVKGS L GTNFH T D WH+LGHINGNAIY N+DP F +FV++T +RWGY Y YDVALWAT+SDFPYSWPLWQRFS+KFV+TNLI+NVG+ VD+ V +A+A ++FIHGS+ G + A + A EG +D+ C CG V +L G +TVCD ATC+ G+ G + CGAG+ +FG CR C+ D EEA KA+R L + HVIMCDT+RPP A C +CA KKDT+CD+ C +GL+G+YNC+WR+ G CR CFD+ AA+ AD+AAKR GGRVIMC+T
Sbjct: 28 QENVYPKGPSVQFYKLFLEDTIKEKLERFGAIAVIEWDVLVAHDKSFEKLYVAAFDVVEPFWVKGSILAGTNFHGTVTITDNWHMLGHINGNAIYNNSDPAFADFVEFTLARWGYSYSYDVALWATVSDFPYSWPLWQRFSSKFVSTNLIANVGFLDVDQETVGNALASETMFIHGSLTGGGGTQFASGATAEKGGNAAAASEGGNSLRIMASLEANAAGEDVGGGGPSTRLATPECRTECGSTVSWDLLGGXXXXXXDGVMDMATVCDHATCSAATAGSADGKPGAWSCGAGDEERFGKHCRPCYFDAEEALKADRVLQNQTREASEEQPHHVIMCDTLRPPEASTCSLKCATKKDTICDDRCKSGLFGNYNCNWRDHGEHCRFCFDDTAAAIVADKAAKRTGGRVIMCNT 439
BLAST of mRNA_H-elongata_contig11164.949.1 vs. uniprot
Match: A0A6H5JKY0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKY0_9PHAE) HSP 1 Score: 375 bits (962), Expect = 5.990e-118 Identity = 207/448 (46.21%), Postives = 263/448 (58.71%), Query Frame = 1
Query: 16 QEDVYPKGPSVQFYKMFLEEDVRVQLANYAALAIIEWDVLVATDQSFEKLYNAAFESTEDFWVKGSNLEGTNFHVTAASNDMWHVLGHINGNAIYKNNDPGFTEFVDYTRSRWGYKYPYDVALWATISDFPYSWPLWQRFSNKFVTTNLISNVGYEHVDKGAVADAVAGGSLFIHGSMVDEGSMASSKAAVTSRRSLRAKVDEG----------------KDLA------------CTMACG----------GVGAELPVGSSTVCD-ATCTKR------GRFGGYLCGAGNSVKFGAMCRLCFNDIEEARKAERRLTDG---------KHVIMCDTMRPPAAVDCKDECALKKDT------------------------VCDEACGTGLYGDYNCSWRNLGA--------------KCRSCFDNMEAALKADEAAKRHGGRVIMCDT 1083
QE+VYPKGPSVQFYK+FLE+ + +L + A+AI+EWDV VA D+SFEKLY AAF+ E FWVKGS L GTNFH TA D W +LGHINGNAIY N+DP F +FV++T +RWGY Y YDVALWAT+SDFPYSWPLWQRFS+KFV+TNLI+NVG+ VD+ + +A+A ++FIHGS+ G + A + A EG +D+ C CG G G + + +TVCD ATC+ G+ G + CGAG+ +FG CR C+ D EEA KA+R L + +HVIMCDT+RPP A C +CALKKDT +CD+ C +GL+G+YNC+WR+ GA CR CFD+ AA+ ADE AKR GGRVIMC+T
Sbjct: 28 QENVYPKGPSVQFYKLFLEDTFKEKLERFGAIAIMEWDVRVAHDKSFEKLYIAAFDVVEPFWVKGSVLAGTNFHGTATITDNWRMLGHINGNAIYNNSDPAFADFVEFTLARWGYSYSYDVALWATVSDFPYSWPLWQRFSSKFVSTNLIANVGFLDVDQETLGNALASETMFIHGSLSGGGGTQFASGATAEKGGNAAAASEGGNSLRIMASLEANAAGEDVGGGGPSIRLATPECRTECGSTVSWDLLGGGGGEDGVMDIATVCDHATCSAATAGSADGKPGAWSCGAGDEERFGKHCRSCYFDAEEALKADRILQNQAREVGEVQPRHVIMCDTLRPPEASTCSLKCALKKDTARTNSSMRPPEPHVNPVWLYVPPQICDDRCESGLFGNYNCNWRDHGALLWTQMILFTPAPEHCRFCFDDTAAAIVADETAKRMGGRVIMCNT 475
BLAST of mRNA_H-elongata_contig11164.949.1 vs. uniprot
Match: D7FI37_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI37_ECTSI) HSP 1 Score: 323 bits (827), Expect = 5.110e-96 Identity = 171/326 (52.45%), Postives = 211/326 (64.72%), Query Frame = 1
Query: 4 NARLQEDVYPKGPSVQFYKMFLEEDVRVQLANYAALAIIEWDVLVATDQSFEKLYNAAFESTEDFWVKGSNLEGTNFHVTAASNDMWHVLGHINGNAIYKNNDPGFTEFVDYTRSRWGYKYPYDVALWATISDFPYSWPLWQRFSNKFVTTNLISNVGYEHVDKGAVADAVAGGSLFIHGSMVDEGSMASSKAA--------VTSRRSLRAKV----------------------------DEGKDLACTMACGGVGAELPVGSSTVCDATCTKRGRFGGYLCGAGNSVKFGAMCRLCFNDIEEARKAERRLTDGKHVIMCDTMRP 873
N ++D+YP+GPSV FY MFL+E VR L+ Y AL+IIEWDVLVA+D SFE+LY+AAF E+FWVKGSNLEGT+FH A + +MWHVLGHINGNAIY N+DP F E+V+YTR+RWGY++PYDVALW TISDFPYSWPL+QR+S+KFV TNLIS+VGYEHV+ V+DAVAG +LFIHGS VDEG++AS +A TS+R L V D + C C + G VCD+ C+ +G CGA N K+GA CR C+ND E+ARK + T G IMC T P
Sbjct: 103 NLAEEDDIYPQGPSVMFYNMFLDESVRSSLSGYDALSIIEWDVLVASDNSFEELYHAAFRVNEEFWVKGSNLEGTSFHSNADAIEMWHVLGHINGNAIYNNDDPAFVEYVEYTRARWGYEHPYDVALWMTISDFPYSWPLYQRYSSKFVVTNLISSVGYEHVNHDTVSDAVAGKTLFIHGSSVDEGNVASYEATEGDAAVDVATSQRQLTEDVPKWQAQEKWRNTSXXXXXXXXXXKKQYEDSSDEEGCMDGCEYTSKDGTRGR--VCDSNCSSPNVYGTLGCGAKNG-KYGADCRACYNDDEKARKQD---TPGNRAIMCSTKMP 422
BLAST of mRNA_H-elongata_contig11164.949.1 vs. uniprot
Match: A0A6H5LJP6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJP6_9PHAE) HSP 1 Score: 312 bits (800), Expect = 5.910e-94 Identity = 167/348 (47.99%), Postives = 213/348 (61.21%), Query Frame = 1
Query: 4 NARLQEDVYPKGPSVQFYKMFLEEDVRVQLANYAALAIIEWDVLVATDQSFEKLYNAAFESTEDFWVKGSNLEGTNFHVTAASNDMWHVLGHINGNAIYKNNDPGFTEFVDYTRSRWGYKYPYDVALWATISDFPYSWPLWQRFSNKFVTTNLISNVGYEHVDKGAVADAVAGGSLFIHGSMVDEGSMASSKAA--------VTSRRSLRAKVDEGKDL---------------------------------------------ACTMACGGVGAELPVGSSTVCDATCTKRGRFGGYLCGAGNSVKFGAMCRLCFNDIEEARKAERRLTDGKHVIMCDTMRPPAAVD 888
N ++D+YP+GPSV FY MFL+EDVR L+ Y AL+IIEWDVLVA+D SFE+LY+AAF E+FWVKGSNLEGT+FH A + +MW +LGHINGNAIY N+DP F E+V+YTR+RWGY++PYDVALW TISDFPYSWPL+QR+S+KFV TNLIS+VGYEHV+ V+DA+AG +LFIHGS VDEG++AS +A ++R L V + K+ C C + G VCD+ C++ +G CGA S K+GA CR C+ND+E+ARK + T IMC T P D
Sbjct: 101 NLAEEDDIYPQGPSVMFYNMFLDEDVRSSLSEYDALSIIEWDVLVASDNSFEELYHAAFRVNEEFWVKGSNLEGTSFHSNADAIEMWQLLGHINGNAIYNNDDPAFVEYVEYTRARWGYEHPYDVALWMTISDFPYSWPLYQRYSSKFVVTNLISSVGYEHVNHDTVSDAIAGNTLFIHGSSVDEGNVASYEATEGDASVDVTATQRHLTEDVPKWKEQEKWKTSXXXXXXXXXXXXXETDDGVXXXXXXXXXXXXXXXSPDEEGCMNGCEYTSKDGTRGR--VCDSNCSRSDAYGTLGCGA-KSGKYGADCRACYNDVEKARKQD---TPANRAIMCSTKMPVDVYD 442
BLAST of mRNA_H-elongata_contig11164.949.1 vs. uniprot
Match: A0A6H5KZV7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZV7_9PHAE) HSP 1 Score: 310 bits (794), Expect = 3.100e-92 Identity = 164/295 (55.59%), Postives = 197/295 (66.78%), Query Frame = 1
Query: 4 NARLQEDVYPKGPSVQFYKMFLEEDVRVQLANYAALAIIEWDVLVATDQSFEKLYNAAFESTEDFWVKGSNLEGTNFHVTAASNDMWHVLGHINGNAIYKNNDPGFTEFVDYTRSRWGYKYPYDVALWATISDFPYSWPLWQRFSNKFVTTNLISNVGYEHVDKGAVADAVAGGSLFIHGSMVDEGSMA--SSKAAVTSRRSLRAKVDEGKDLACTMACGGVGAELPVGS-----STVCDATCTKRG----RFGGYLCGAGNSVKFGAMCRLCFNDIEEARKAERRLTDGKHVIM 855
N +E+VYPKGPSVQFYK++L+ +VR QL Y ALAIIEWDV+VA D SFEKLY AAF E FW+KGS LEG NFH T + HVLGHINGNAIY N DP F EFV+YT +RW Y YDVALWATISDFPYSWPLWQRFS KFV +LI+NVG++ +D+ AV AVA +LFIHGS+ G +S A S +LR CT +CGG GA G +TVCD +C G RFGGYLCGAG+ ++G+ CR CF D+EEA+ AE +L + + M
Sbjct: 195 NLSQEENVYPKGPSVQFYKLYLDSNVRRQLIEYDALAIIEWDVIVAHDTSFEKLYAAAFGGVEPFWIKGSTLEGVNFHETVVLPESRHVLGHINGNAIYNNTDPAFVEFVNYTLTRWEYTQSYDVALWATISDFPYSWPLWQRFSRKFVAIDLIANVGFQDMDQQAVLKAVASNTLFIHGSLTGGGGSMFHASGAKADSSPALRFLGKNRPGERCTASCGG-GAPPSSGVGAGALATVCDRSCYSGGELGARFGGYLCGAGDIKEYGSHCRTCFTDMEEAQAAEEQLAEEEQAAM 488
BLAST of mRNA_H-elongata_contig11164.949.1 vs. uniprot
Match: D7FI63_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI63_ECTSI) HSP 1 Score: 306 bits (783), Expect = 2.290e-90 Identity = 165/346 (47.69%), Postives = 211/346 (60.98%), Query Frame = 1
Query: 4 NARLQEDVYPKGPSVQFYKMFLEEDVRVQLANYAALAIIEWDVLVATDQSFEKLYNAAFESTEDFWVKGSNLEGTNFHVTAASNDMWHVLGHINGNAIYKNNDPGFTEFVDYTRSRWGYKYPYDVALWATISDFPYSWPLWQRFSNKFVTTNLISNVGYEHVDKGAVADAVAGGSLFIHGSMVDEGSMASSKAAVTSRRSLR--AKVDEGKDL------------------------------------------------------ACTMACGGVGAELPVGSSTVCDATCTKRGRFGGYLCGAGNSVKFGAMCRLCFNDIEEARKAERRLTDGKHVIMCDTMRP 873
N ++D+YPKGPSV FYKMFL+E+VR L+ Y AL+I+EWDVLVA+D SFE+LY+AAF E+FWVKGSNLEGT+FH +A +++MW VLGHINGNAIY N+DP F E+V+YTR+RWGY++PYDVALW TISDFPYSWPL+QR+S+KFV TNLIS VGYEHV V+DAVAG +LFIHGS V++G++AS +A ++ + AK G+ L AC+ C + G VCDA C+ +G C A +G CR CFND+++ARK + T IMC T RP
Sbjct: 102 NLAEEDDIYPKGPSVMFYKMFLDENVRSSLSEYDALSIVEWDVLVASDNSFEELYHAAFRVNEEFWVKGSNLEGTSFHSSAEASEMWQVLGHINGNAIYNNDDPAFVEYVEYTRARWGYEHPYDVALWMTISDFPYSWPLYQRYSSKFVVTNLISYVGYEHVSHDTVSDAVAGKTLFIHGSSVEDGNVASYEAVASTATATVDVAKQTRGRKLTGSTPKWKTQEKWRSSKDDSIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGACSSTCEYTSRDGTRGR--VCDANCSTPDVYGTRGCNAKQGT-YGEECRACFNDVDKARKQD---TPENRSIMCSTKRP 441
BLAST of mRNA_H-elongata_contig11164.949.1 vs. uniprot
Match: D7FR80_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR80_ECTSI) HSP 1 Score: 296 bits (758), Expect = 1.600e-88 Identity = 140/188 (74.47%), Postives = 160/188 (85.11%), Query Frame = 1
Query: 16 QEDVYPKGPSVQFYKMFLEEDVRVQLANYAALAIIEWDVLVATDQSFEKLYNAAFESTEDFWVKGSNLEGTNFHVTAASNDMWHVLGHINGNAIYKNNDPGFTEFVDYTRSRWGYKYPYDVALWATISDFPYSWPLWQRFSNKFVTTNLISNVGYEHVDKGAVADAVAGGSLFIHGSMVDEGSMASSK 579
+EDVYPKGPSV F+KMFL+E V +L+ Y ALAIIEWDVLVATD+SFE+LY+AAF E+FWVKGSNLEGTNFH +A DMW V+GHINGNAIY NNDP F E+VDYTR+R+ Y+YPYDVALW TISDFPYSWPL+QR+S KFVTTNLIS VGYEHVD V+DA+AG +LFIHGS VDEGS AS K
Sbjct: 50 EEDVYPKGPSVMFFKMFLDEGVHAELSEYDALAIIEWDVLVATDRSFEELYHAAFRVNEEFWVKGSNLEGTNFHSSADVTDMWRVMGHINGNAIYNNNDPAFAEYVDYTRARFKYRYPYDVALWLTISDFPYSWPLYQRYSRKFVTTNLISYVGYEHVDHDTVSDAIAGQTLFIHGSRVDEGSGASIK 237
BLAST of mRNA_H-elongata_contig11164.949.1 vs. uniprot
Match: A0A6H5JSN3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSN3_9PHAE) HSP 1 Score: 290 bits (743), Expect = 1.710e-85 Identity = 134/183 (73.22%), Postives = 153/183 (83.61%), Query Frame = 1
Query: 16 QEDVYPKGPSVQFYKMFLEEDVRVQLANYAALAIIEWDVLVATDQSFEKLYNAAFESTEDFWVKGSNLEGTNFHVTAASNDMWHVLGHINGNAIYKNNDPGFTEFVDYTRSRWGYKYPYDVALWATISDFPYSWPLWQRFSNKFVTTNLISNVGYEHVDKGAVADAVAGGSLFIHGSMVDEGS 564
++DVYP+GPSV FYKMFL+E +R + Y ALAI+EWDVLVATD+SFE+LY+AAF E+FWVKGSNLEGTNFH ++ +DMWHVLGHINGNAIY N D F E+VDYTRSRW Y YPYDVALW TISDFPYSWPL+QRFSNKFVTTNLI+ VG HVD G V DA+AG +LFIHG VDEGS
Sbjct: 118 EDDVYPRGPSVMFYKMFLDERIRSNFSEYDALAILEWDVLVATDRSFEELYHAAFRVNEEFWVKGSNLEGTNFHSSSMMSDMWHVLGHINGNAIYNNKDQAFVEYVDYTRSRWEYNYPYDVALWLTISDFPYSWPLYQRFSNKFVTTNLIAYVGKAHVDHGTVTDAIAGQTLFIHGKNVDEGS 300
BLAST of mRNA_H-elongata_contig11164.949.1 vs. uniprot
Match: D7FI39_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI39_ECTSI) HSP 1 Score: 291 bits (745), Expect = 4.030e-85 Identity = 134/194 (69.07%), Postives = 165/194 (85.05%), Query Frame = 1
Query: 4 NARLQEDVYPKGPSVQFYKMFLEEDVRVQLANYAALAIIEWDVLVATDQSFEKLYNAAFESTEDFWVKGSNLEGTNFHVTAASNDMWHVLGHINGNAIYKNNDPGFTEFVDYTRSRWGYKYPYDVALWATISDFPYSWPLWQRFSNKFVTTNLISNVGYEHVDKGAVADAVAGGSLFIHGSMVDEGSMASSKAA 585
N ++D+YP+GPSV FY MFL+E VR L+ Y AL+IIEWDVLVA+D SFE+LY+AAF E+FWVKGSNLEGT+FH TA +++MW VLGHINGNAIY N+DP F E+V+YTRSRWGY++PYDVALW TISDFPYSWPL+QR+S+KFV TNLIS+VG+EHV V+DAVAG +LFIHGS V+EG++AS +AA
Sbjct: 105 NLAQEDDIYPRGPSVMFYNMFLDESVRSSLSEYDALSIIEWDVLVASDNSFEELYHAAFRVNEEFWVKGSNLEGTSFHSTAEASEMWQVLGHINGNAIYNNDDPAFVEYVEYTRSRWGYEHPYDVALWMTISDFPYSWPLYQRYSSKFVVTNLISSVGFEHVGHDMVSDAVAGQTLFIHGSSVEEGNVASFRAA 298
BLAST of mRNA_H-elongata_contig11164.949.1 vs. uniprot
Match: D8LLE5_ECTSI (Imm upregulated 5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLE5_ECTSI) HSP 1 Score: 267 bits (683), Expect = 4.920e-80 Identity = 125/171 (73.10%), Postives = 142/171 (83.04%), Query Frame = 1
Query: 52 FYKMFLEEDVRVQLANYAALAIIEWDVLVATDQSFEKLYNAAFESTEDFWVKGSNLEGTNFHVTAASNDMWHVLGHINGNAIYKNNDPGFTEFVDYTRSRWGYKYPYDVALWATISDFPYSWPLWQRFSNKFVTTNLISNVGYEHVDKGAVADAVAGGSLFIHGSMVDEGS 564
FYK+FL+E +R + Y ALAIIEWDVLVATD+SFE+LY+AAF E+FWVKGSNLEGTNFH ++ +DMWHVLGHINGNAIY NND F E+VDYTR+RW YPYDVALW TISDFPYSWPL+QRFSNKFVTTNLI+ VG HVD G V DA+AG +LFIHG VDEGS
Sbjct: 2 FYKLFLDERIRSNFSEYDALAIIEWDVLVATDRSFEELYHAAFRVNEEFWVKGSNLEGTNFHSSSMMSDMWHVLGHINGNAIYNNNDQAFVEYVDYTRARWEDNYPYDVALWLTISDFPYSWPLYQRFSNKFVTTNLIAYVGKAHVDHGTVTDAIAGQTLFIHGKNVDEGS 172 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11164.949.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig11164.949.1 >prot_H-elongata_contig11164.949.1 ID=prot_H-elongata_contig11164.949.1|Name=mRNA_H-elongata_contig11164.949.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=362bp MNARLQEDVYPKGPSVQFYKMFLEEDVRVQLANYAALAIIEWDVLVATDQback to top mRNA from alignment at H-elongata_contig11164:6606..8782+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig11164.949.1 ID=mRNA_H-elongata_contig11164.949.1|Name=mRNA_H-elongata_contig11164.949.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2177bp|location=Sequence derived from alignment at H-elongata_contig11164:6606..8782+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig11164:6606..8782+ >mRNA_H-elongata_contig11164.949.1 ID=mRNA_H-elongata_contig11164.949.1|Name=mRNA_H-elongata_contig11164.949.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2172bp|location=Sequence derived from alignment at H-elongata_contig11164:6606..8782+ (Himanthalia elongata Himel1 dioecious)back to top |