mRNA_H-elongata_contig111007.905.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig111007.905.1
Unique NamemRNA_H-elongata_contig111007.905.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig111007.905.1 vs. uniprot
Match: A0A8F0FAP0_9PHAE (Photosystem I reaction center subunit III n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0FAP0_9PHAE)

HSP 1 Score: 354 bits (909), Expect = 7.500e-123
Identity = 174/184 (94.57%), Postives = 179/184 (97.28%), Query Frame = 1
Query:  106 MHNLKKSLVIFFVTLSLPLIAFADVAGLTKCSDSVAFNKRLESSVKKLELRVQKYETGSPPALALEQQIGRTKQRFDRYSNSELLCGKEGLPHLITDGRWDHAVEFMIPGMMFLYISGWIGWVGRKYLSTVSNTSKPTEKEIIIDVPLALKIMSTGFIWPASAWQEFTSGDFLAADSEITVSPR 657
            M NLKKSL+IFFVTLSLPLIAFADVAGLTKCS+S AFNKRLESSVKKLELRVQKYE GSPPALALEQQI RTKQRFDRYSNSELLCGKEGLPHLITDGRWDHAVEFMIPGMMFLYISGWIGWVGRKYL+TVSNTS PTEKEIIIDVPLALKIMSTGFIWPASAWQEFTSG+FLA+DSEITVSPR
Sbjct:    1 MRNLKKSLLIFFVTLSLPLIAFADVAGLTKCSESAAFNKRLESSVKKLELRVQKYEAGSPPALALEQQISRTKQRFDRYSNSELLCGKEGLPHLITDGRWDHAVEFMIPGMMFLYISGWIGWVGRKYLNTVSNTSNPTEKEIIIDVPLALKIMSTGFIWPASAWQEFTSGNFLASDSEITVSPR 184          
BLAST of mRNA_H-elongata_contig111007.905.1 vs. uniprot
Match: D1J7A8_ECTSI (Photosystem I reaction center subunit III n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D1J7A8_ECTSI)

HSP 1 Score: 346 bits (887), Expect = 5.400e-119
Identity = 176/219 (80.37%), Postives = 192/219 (87.67%), Query Frame = 1
Query:    1 YTIIYDYFYIRENLLPNIKNLFFIKTLNLSLSL*LMHNLKKSLVIFFVTLSLPLIAFADVAGLTKCSDSVAFNKRLESSVKKLELRVQKYETGSPPALALEQQIGRTKQRFDRYSNSELLCGKEGLPHLITDGRWDHAVEFMIPGMMFLYISGWIGWVGRKYLSTVSNTSKPTEKEIIIDVPLALKIMSTGFIWPASAWQEFTSGDFLAADSEITVSPR 657
            YT +Y YFYI    L +++NLFFIK  + S    +M  +KKSL+IFF+TLSLPL +FADVAGLTKCS+SVAFNKRLE SVKKLE RVQKYE  SPPALALEQQI RTKQRF+RYSNSELLCGKEGLPHLITDGRWDHAVEFMIPGMMFLYI+GWIGWVGR YL+TVSNT+ PTEKEIIIDVPLALKIMS+GFIWP SAWQEFTSG FLA DSEITVSPR
Sbjct:    3 YTTMYTYFYI----LCSVENLFFIKIYSFSRFSSIMFKIKKSLLIFFLTLSLPLASFADVAGLTKCSESVAFNKRLELSVKKLEGRVQKYEPNSPPALALEQQINRTKQRFNRYSNSELLCGKEGLPHLITDGRWDHAVEFMIPGMMFLYITGWIGWVGRSYLNTVSNTTNPTEKEIIIDVPLALKIMSSGFIWPISAWQEFTSGKFLAPDSEITVSPR 217          
BLAST of mRNA_H-elongata_contig111007.905.1 vs. uniprot
Match: A0A1I9LVT8_9PHAE (Photosystem I reaction center subunit III n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LVT8_9PHAE)

HSP 1 Score: 336 bits (861), Expect = 5.100e-115
Identity = 171/220 (77.73%), Postives = 188/220 (85.45%), Query Frame = 1
Query:    1 YTIIYDYFYIRENLLPNIKNLFFIKTLNLSLSL*LMHNLKKSLVIFFVTLSLPLIAFADVAGLTKCSDSVAFNKRLESSVKKLELRVQKYETGSPPALALEQQIGRTKQRFDRYSNSELLCGKEGLPHLITDGRWDHAVEFMIPGMMFLYISGWIGWVGRKYLSTVSNTS-KPTEKEIIIDVPLALKIMSTGFIWPASAWQEFTSGDFLAADSEITVSPR 657
            YT +Y YFYI    L N++NLFFIK  N S+ L +M   KKSL+IFF+TLSLP I+FADVAGLTKCSDS  FNKRLESSVKKLE R++KYE  SPPAL L++QI  TK+RFDRYSNSELLCGK+GLPHLITDGRWDHAVEFMIPG+MFLYISGWIGWVGR YL+TVS TS  PTEKEIIIDVPLALKIMS+GFIWP SAWQEFTSG FL  DSEITVSPR
Sbjct:    3 YTNMYTYFYI----LCNVENLFFIKIYNFSMFLAIMFKFKKSLLIFFLTLSLPFISFADVAGLTKCSDSSPFNKRLESSVKKLETRIKKYEPNSPPALVLQEQIRTTKKRFDRYSNSELLCGKDGLPHLITDGRWDHAVEFMIPGIMFLYISGWIGWVGRSYLNTVSKTSLNPTEKEIIIDVPLALKIMSSGFIWPISAWQEFTSGKFLTPDSEITVSPR 218          
BLAST of mRNA_H-elongata_contig111007.905.1 vs. uniprot
Match: A0A0S0GAQ3_COSCS (Photosystem I reaction center subunit III n=29 Tax=Laminariales TaxID=2886 RepID=A0A0S0GAQ3_COSCS)

HSP 1 Score: 330 bits (847), Expect = 3.950e-113
Identity = 162/201 (80.60%), Postives = 178/201 (88.56%), Query Frame = 1
Query:   55 KNLFFIKTLNLSLSL*LMHNLKKSLVIFFVTLSLPLIAFADVAGLTKCSDSVAFNKRLESSVKKLELRVQKYETGSPPALALEQQIGRTKQRFDRYSNSELLCGKEGLPHLITDGRWDHAVEFMIPGMMFLYISGWIGWVGRKYLSTVSNTSKPTEKEIIIDVPLALKIMSTGFIWPASAWQEFTSGDFLAADSEITVSPR 657
            KNLFFIKT + SL   LM N KKS++IFF+ LS+PL AFADVAGLTKCS+S  FNKR ++SVKKLE+RV+KYE GSPPALALEQQI RTKQRF RYSNSELLCGKEGLPHLITDGRWDHAVEF+IPGMMFLYISGWIGW GR YL+TV  TS PTEKEII+DVPLALKIMS+GFIWP SAWQEFT+G+FL  DSEITVSPR
Sbjct:    2 KNLFFIKTHSFSLLFRLMFNFKKSVLIFFLALSIPLAAFADVAGLTKCSESAPFNKRFDASVKKLEVRVKKYEPGSPPALALEQQITRTKQRFTRYSNSELLCGKEGLPHLITDGRWDHAVEFVIPGMMFLYISGWIGWAGRSYLNTVGATSNPTEKEIILDVPLALKIMSSGFIWPVSAWQEFTTGNFLVPDSEITVSPR 202          
BLAST of mRNA_H-elongata_contig111007.905.1 vs. uniprot
Match: A0A8F0JXW8_9PHAE (Photosystem I reaction center subunit III n=2 Tax=Laminariales TaxID=2886 RepID=A0A8F0JXW8_9PHAE)

HSP 1 Score: 325 bits (833), Expect = 2.860e-111
Identity = 156/184 (84.78%), Postives = 168/184 (91.30%), Query Frame = 1
Query:  106 MHNLKKSLVIFFVTLSLPLIAFADVAGLTKCSDSVAFNKRLESSVKKLELRVQKYETGSPPALALEQQIGRTKQRFDRYSNSELLCGKEGLPHLITDGRWDHAVEFMIPGMMFLYISGWIGWVGRKYLSTVSNTSKPTEKEIIIDVPLALKIMSTGFIWPASAWQEFTSGDFLAADSEITVSPR 657
            M NLKKS +IFF+ LS+PL AFADVAGLTKCS+S  FNKRLE+SVKKLE RVQKYE GSPPALALEQQI RTKQRFDRYS SELLCGKEGLPHLITDGRWDH+VEF+IPG+MFLYISGWIGWVGR YL+TVS TS PTEKEIIIDVPLALKIMS+GF+WP SAWQEFT G+FLA DSEITVSPR
Sbjct:    1 MFNLKKSFLIFFLALSIPLTAFADVAGLTKCSESAPFNKRLEASVKKLESRVQKYEVGSPPALALEQQINRTKQRFDRYSKSELLCGKEGLPHLITDGRWDHSVEFVIPGLMFLYISGWIGWVGRSYLNTVSKTSNPTEKEIIIDVPLALKIMSSGFVWPVSAWQEFTGGNFLAPDSEITVSPR 184          
BLAST of mRNA_H-elongata_contig111007.905.1 vs. uniprot
Match: A0A6B7ILH5_9PHAE (Photosystem I reaction center subunit III n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A6B7ILH5_9PHAE)

HSP 1 Score: 320 bits (820), Expect = 2.730e-109
Identity = 152/184 (82.61%), Postives = 167/184 (90.76%), Query Frame = 1
Query:  106 MHNLKKSLVIFFVTLSLPLIAFADVAGLTKCSDSVAFNKRLESSVKKLELRVQKYETGSPPALALEQQIGRTKQRFDRYSNSELLCGKEGLPHLITDGRWDHAVEFMIPGMMFLYISGWIGWVGRKYLSTVSNTSKPTEKEIIIDVPLALKIMSTGFIWPASAWQEFTSGDFLAADSEITVSPR 657
            M   KKSL+IF +  SLPL+ FADVAGLTKCS+S  FNKRL++SVKKLE R+QKYE GSPPALALEQQI RTKQRFDRYSNSELLCGK+GLPHLITDGRWDHAVEFMIPGMMFLYI+GWIGWVGR YL+T+S +S PTEKEIIIDVPLALKIMS+GFIWP SAWQEFTSG+FLA DS+ITVSPR
Sbjct:    1 MFKFKKSLLIFVLVFSLPLVTFADVAGLTKCSESTTFNKRLDASVKKLEGRIQKYEAGSPPALALEQQINRTKQRFDRYSNSELLCGKDGLPHLITDGRWDHAVEFMIPGMMFLYITGWIGWVGRNYLNTISGSSNPTEKEIIIDVPLALKIMSSGFIWPVSAWQEFTSGNFLAPDSDITVSPR 184          
BLAST of mRNA_H-elongata_contig111007.905.1 vs. uniprot
Match: A0A141BSG7_9PHAE (Photosystem I reaction center subunit III n=15 Tax=Sargassaceae TaxID=3014 RepID=A0A141BSG7_9PHAE)

HSP 1 Score: 316 bits (809), Expect = 1.390e-107
Identity = 149/182 (81.87%), Postives = 168/182 (92.31%), Query Frame = 1
Query:  112 NLKKSLVIFFVTLSLPLIAFADVAGLTKCSDSVAFNKRLESSVKKLELRVQKYETGSPPALALEQQIGRTKQRFDRYSNSELLCGKEGLPHLITDGRWDHAVEFMIPGMMFLYISGWIGWVGRKYLSTVSNTSKPTEKEIIIDVPLALKIMSTGFIWPASAWQEFTSGDFLAADSEITVSPR 657
            +LKKSL+I F+TLSLPL  FADVAGLTKCS+S AFN RLESSV+KLE R++KYETGSPPALALEQQI RTKQRF+RYSNSELLCGK+GLPHLITDGRWDHAVEF+IPG+MF+YISGWIGWVGR Y++ +S TS PTEKEIIIDVPLA+KIMS+GF+WP SAWQEF SG FLA+DSEITVSPR
Sbjct:    5 SLKKSLLIVFLTLSLPLTVFADVAGLTKCSESSAFNNRLESSVRKLESRIKKYETGSPPALALEQQINRTKQRFNRYSNSELLCGKDGLPHLITDGRWDHAVEFIIPGIMFIYISGWIGWVGRSYINNISTTSNPTEKEIIIDVPLAIKIMSSGFVWPISAWQEFASGSFLASDSEITVSPR 186          
BLAST of mRNA_H-elongata_contig111007.905.1 vs. uniprot
Match: A0A344PFC1_9PHAE (Photosystem I reaction center subunit III n=5 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A344PFC1_9PHAE)

HSP 1 Score: 315 bits (807), Expect = 2.700e-107
Identity = 154/185 (83.24%), Postives = 167/185 (90.27%), Query Frame = 1
Query:  103 LMHNLKKSLVIFFVTLSLPLIAFADVAGLTKCSDSVAFNKRLESSVKKLELRVQKYETGSPPALALEQQIGRTKQRFDRYSNSELLCGKEGLPHLITDGRWDHAVEFMIPGMMFLYISGWIGWVGRKYLSTVSNTSKPTEKEIIIDVPLALKIMSTGFIWPASAWQEFTSGDFLAADSEITVSPR 657
            +M   KKSL+IFF+ LSLPL +FADVAGLTKCSDS AF KRL+SSVKKLE R++KYE  SPPALALEQQI RTKQRFDRYSNS+LLCGK+GLPHLITDGRW+HAVEF+IPGMMFLYISGWIGWVGR YL+TVS  S PTEKEIIIDVPLALKIMS+GFIWP SAWQEFTSG FLA DSEITVSPR
Sbjct:    1 MMFKFKKSLLIFFLALSLPLASFADVAGLTKCSDSSAFTKRLDSSVKKLEGRIKKYEPNSPPALALEQQINRTKQRFDRYSNSQLLCGKDGLPHLITDGRWNHAVEFVIPGMMFLYISGWIGWVGRSYLNTVSVFSNPTEKEIIIDVPLALKIMSSGFIWPISAWQEFTSGKFLAPDSEITVSPR 185          
BLAST of mRNA_H-elongata_contig111007.905.1 vs. uniprot
Match: A0A2R4QPX5_9PHAE (Photosystem I reaction center subunit III n=3 Tax=Fucaceae TaxID=3010 RepID=A0A2R4QPX5_9PHAE)

HSP 1 Score: 310 bits (795), Expect = 1.880e-105
Identity = 147/182 (80.77%), Postives = 163/182 (89.56%), Query Frame = 1
Query:  112 NLKKSLVIFFVTLSLPLIAFADVAGLTKCSDSVAFNKRLESSVKKLELRVQKYETGSPPALALEQQIGRTKQRFDRYSNSELLCGKEGLPHLITDGRWDHAVEFMIPGMMFLYISGWIGWVGRKYLSTVSNTSKPTEKEIIIDVPLALKIMSTGFIWPASAWQEFTSGDFLAADSEITVSPR 657
            +LKK L++  +T SLP   FAD+AGLTKCSDS  FN RL+SSVKKLE RV+KYE GSPPALALEQQI RTKQRF+RYSNSELLCGK+GLPHLITDGRWDHAVEF+IPG+MF+YISGWIGWVGR Y++ VSNT  PTEKEIIIDVPLALKIMS+GFIWP SAWQEFTSG FLA+DSEITVSPR
Sbjct:    5 HLKKLLLVILITFSLPSTIFADIAGLTKCSDSSTFNNRLDSSVKKLESRVKKYEAGSPPALALEQQISRTKQRFNRYSNSELLCGKDGLPHLITDGRWDHAVEFVIPGLMFIYISGWIGWVGRSYINNVSNTKNPTEKEIIIDVPLALKIMSSGFIWPISAWQEFTSGSFLASDSEITVSPR 186          
BLAST of mRNA_H-elongata_contig111007.905.1 vs. uniprot
Match: A0A8F0F743_9PHAE (Photosystem I reaction center subunit III n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F743_9PHAE)

HSP 1 Score: 310 bits (794), Expect = 2.960e-105
Identity = 145/185 (78.38%), Postives = 166/185 (89.73%), Query Frame = 1
Query:  103 LMHNLKKSLVIFFVTLSLPLIAFADVAGLTKCSDSVAFNKRLESSVKKLELRVQKYETGSPPALALEQQIGRTKQRFDRYSNSELLCGKEGLPHLITDGRWDHAVEFMIPGMMFLYISGWIGWVGRKYLSTVSNTSKPTEKEIIIDVPLALKIMSTGFIWPASAWQEFTSGDFLAADSEITVSPR 657
            LM  L+KSL+ FF+  +LPL A+ADVAGLTKCSDS AFNKR + SVKKLE R+QKYE GSPP LALEQQI RTK RF+RYSNSELLCGK+GLPHLITDGRWDHAVEF+IPG+MF+YISGWIGWVGRKY++T+  +  PTEKEIIIDVPLA+KIMS+GFIWP SAWQEFT+G+FLA+DSEITVSPR
Sbjct:    5 LMFTLRKSLLFFFLAFTLPLNAYADVAGLTKCSDSAAFNKRFDGSVKKLETRIQKYEPGSPPTLALEQQIERTKNRFNRYSNSELLCGKDGLPHLITDGRWDHAVEFIIPGIMFIYISGWIGWVGRKYINTIGTSKNPTEKEIIIDVPLAVKIMSSGFIWPISAWQEFTTGNFLASDSEITVSPR 189          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig111007.905.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8F0FAP0_9PHAE7.500e-12394.57Photosystem I reaction center subunit III n=1 Tax=... [more]
D1J7A8_ECTSI5.400e-11980.37Photosystem I reaction center subunit III n=2 Tax=... [more]
A0A1I9LVT8_9PHAE5.100e-11577.73Photosystem I reaction center subunit III n=1 Tax=... [more]
A0A0S0GAQ3_COSCS3.950e-11380.60Photosystem I reaction center subunit III n=29 Tax... [more]
A0A8F0JXW8_9PHAE2.860e-11184.78Photosystem I reaction center subunit III n=2 Tax=... [more]
A0A6B7ILH5_9PHAE2.730e-10982.61Photosystem I reaction center subunit III n=1 Tax=... [more]
A0A141BSG7_9PHAE1.390e-10781.87Photosystem I reaction center subunit III n=15 Tax... [more]
A0A344PFC1_9PHAE2.700e-10783.24Photosystem I reaction center subunit III n=5 Tax=... [more]
A0A2R4QPX5_9PHAE1.880e-10580.77Photosystem I reaction center subunit III n=3 Tax=... [more]
A0A8F0F743_9PHAE2.960e-10578.38Photosystem I reaction center subunit III n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig111007contigH-elongata_contig111007:1425..2084 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score332.0
Seed ortholog evalue1.7e-88
Seed eggNOG ortholog2880.D1J7A8
Preferred namepsaF
KEGG koko:K02694
KEGG Pathwayko00195,ko01100,map00195,map01100
KEGG ModuleM00163
GOsGO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009507,GO:0009526,GO:0009532,GO:0009534,GO:0009535,GO:0009536,GO:0009543,GO:0009570,GO:0009579,GO:0009941,GO:0010287,GO:0016020,GO:0019904,GO:0031967,GO:0031975,GO:0031976,GO:0031977,GO:0031978,GO:0031984,GO:0034357,GO:0042651,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0055035
EggNOG free text desc.photosynthesis
EggNOG OGs28NRD@1,2QTZ8@2759
COG Functional cat.S
BiGG ReactioniRC1080.CRv4_Au5_s9_g15717_t1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko00194
Hectar predicted targeting categorysignal peptide
Exons1
Model size660
Cds size555
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929635.5946035-UTR-H-elongata_contig111007:1424..15291622929635.5946035-UTR-H-elongata_contig111007:1424..1529Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig111007 1425..1529 +
1691679100.2755156-UTR-H-elongata_contig111007:1424..15291691679100.2755156-UTR-H-elongata_contig111007:1424..1529Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig111007 1425..1529 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929635.6095858-CDS-H-elongata_contig111007:1529..20841622929635.6095858-CDS-H-elongata_contig111007:1529..2084Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig111007 1530..2084 +
1691679100.2848647-CDS-H-elongata_contig111007:1529..20841691679100.2848647-CDS-H-elongata_contig111007:1529..2084Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig111007 1530..2084 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig111007.905.1prot_H-elongata_contig111007.905.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig111007 1530..2084 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig111007.905.1

>prot_H-elongata_contig111007.905.1 ID=prot_H-elongata_contig111007.905.1|Name=mRNA_H-elongata_contig111007.905.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=185bp
MHNLKKSLVIFFVTLSLPLIAFADVAGLTKCSDSVAFNKRLESSVKKLEL
RVQKYETGSPPALALEQQIGRTKQRFDRYSNSELLCGKEGLPHLITDGRW
DHAVEFMIPGMMFLYISGWIGWVGRKYLSTVSNTSKPTEKEIIIDVPLAL
KIMSTGFIWPASAWQEFTSGDFLAADSEITVSPR*
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mRNA from alignment at H-elongata_contig111007:1425..2084+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig111007.905.1 ID=mRNA_H-elongata_contig111007.905.1|Name=mRNA_H-elongata_contig111007.905.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=660bp|location=Sequence derived from alignment at H-elongata_contig111007:1425..2084+ (Himanthalia elongata Himel1 dioecious)
TATACTATTATATATGACTATTTTTATATTAGGGAAAATTTATTACCTAA TATAAAAAATTTATTTTTTATTAAAACCCTTAATTTATCATTGTCGCTGT AATTGATGCATAATTTAAAAAAATCATTAGTAATATTTTTTGTAACTCTT AGTCTCCCATTAATTGCTTTTGCAGATGTTGCAGGTTTAACAAAATGTAG TGACTCAGTTGCTTTTAATAAACGACTAGAGTCTAGTGTAAAAAAATTGG AACTACGAGTTCAAAAATATGAAACGGGTTCTCCTCCAGCATTAGCATTA GAACAACAAATAGGCCGAACTAAACAACGATTTGACCGTTATTCTAATTC AGAGCTATTATGTGGCAAAGAAGGTTTACCACATTTAATAACAGATGGAA GATGGGATCATGCTGTTGAATTTATGATTCCAGGAATGATGTTCTTATAT ATTAGTGGTTGGATCGGTTGGGTTGGTCGTAAATATTTAAGTACAGTAAG TAATACTTCAAAACCAACAGAAAAAGAGATTATAATTGATGTACCTCTAG CATTAAAAATTATGTCAACAGGATTTATTTGGCCTGCTTCAGCTTGGCAA GAATTTACAAGTGGAGATTTTTTAGCAGCAGATTCTGAAATAACAGTCTC ACCGCGATAA
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Coding sequence (CDS) from alignment at H-elongata_contig111007:1425..2084+

>mRNA_H-elongata_contig111007.905.1 ID=mRNA_H-elongata_contig111007.905.1|Name=mRNA_H-elongata_contig111007.905.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1110bp|location=Sequence derived from alignment at H-elongata_contig111007:1425..2084+ (Himanthalia elongata Himel1 dioecious)
ATGCATAATTTAAAAAAATCATTAGTAATATTTTTTGTAACTCTTAGTCT
CCCATTAATTGCTTTTGCAGATGTTGCAGGTTTAACAAAATGTAGTGACT
CAGTTGCTTTTAATAAACGACTAGAGTCTAGTGTAAAAAAATTGGAACTA
CGAGTTCAAAAATATGAAACGGGTTCTCCTCCAGCATTAGCATTAGAACA
ACAAATAGGCCGAACTAAACAACGATTTGACCGTTATTCTAATTCAGAGC
TATTATGTGGCAAAGAAGGTTTACCACATTTAATAACAGATGGAAGATGG
GATCATGCTGTTGAATTTATGATTCCAGGAATGATGTTCTTATATATTAG
TGGTTGGATCGGTTGGGTTGGTCGTAAATATTTAAGTACAGTAAGTAATA
CTTCAAAACCAACAGAAAAAGAGATTATAATTGATGTACCTCTAGCATTA
AAAATTATGTCAACAGGATTTATTTGGCCTGCTTCAGCTTGGCAAGAATT
TACAAGTGGAGATTTTTTAGCAGCAGATTCTGAAATAACAGTCTCACCGC
GATAAATGCATAATTTAAAAAAATCATTAGTAATATTTTTTGTAACTCTT
AGTCTCCCATTAATTGCTTTTGCAGATGTTGCAGGTTTAACAAAATGTAG
TGACTCAGTTGCTTTTAATAAACGACTAGAGTCTAGTGTAAAAAAATTGG
AACTACGAGTTCAAAAATATGAAACGGGTTCTCCTCCAGCATTAGCATTA
GAACAACAAATAGGCCGAACTAAACAACGATTTGACCGTTATTCTAATTC
AGAGCTATTATGTGGCAAAGAAGGTTTACCACATTTAATAACAGATGGAA
GATGGGATCATGCTGTTGAATTTATGATTCCAGGAATGATGTTCTTATAT
ATTAGTGGTTGGATCGGTTGGGTTGGTCGTAAATATTTAAGTACAGTAAG
TAATACTTCAAAACCAACAGAAAAAGAGATTATAATTGATGTACCTCTAG
CATTAAAAATTATGTCAACAGGATTTATTTGGCCTGCTTCAGCTTGGCAA
GAATTTACAAGTGGAGATTTTTTAGCAGCAGATTCTGAAATAACAGTCTC
ACCGCGATAA
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