mRNA_H-elongata_contig110065.824.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig110065.824.1 vs. uniprot
Match: A0A438CFA8_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438CFA8_VITVI) HSP 1 Score: 204 bits (518), Expect = 1.440e-53 Identity = 140/391 (35.81%), Postives = 214/391 (54.73%), Query Frame = 1
Query: 10 EPRTMGEAQASSEWSQWKRAIAREMDGQISRGVWQVVERPKGKTVLGTRVVFKQKLDKDGRTEKYKCRLVAQGFRQVKCMHYEESYSPTSAQASIRMVLSMIVALGWEARQLDVDMAYLETDVEEEIYIELPEAYRDFRKQ--VGLLKKAMYGLVHARLPTQCVFRRILHGIVVVVIVVYVDDLLVASATKHDEEQAVRDLCSCFLIKDLG*ASYYLGCHITRDRNAGTQTFDQHQYIQTMAERFGV--TKTSIIPSVSGGRALPKSDSPQTDAEVEEMRQIPYREIVGTLI-----KRYNIYGALGTLG----SPTEGNRGGGTNLSAWV-DADYGTCPDTRRSVSGGAVMMASGAISWFSRVQKVTAAASSESEYVALAEMVNELRFLR 1140
+P T EA ++ WK A+ EM+ GVW +VE P G +G + VFK K D G+ E+YK RLV +G+ Q + + ++E++SP S + S R++++++ E Q+DV A+L D++EE+Y+E P + + K+ V L K++YGL A QC G + +V+YVDD+L+AS + L + F +KDLG ASY LG I RDR G Q YI+ + +RF + K++ P V G + K+ PQ D E EEM+ IPY +VG+L+ R +I +G LG +P + + +WV DAD+ C D ++S +G MMA GA+SW S Q +TA+++ E+EYVA E ++R
Sbjct: 815 DPVTYQEAIHCPQFISWKEAMDDEMNSMYMNGVWDLVELPHGCKPVGCKWVFKTKRDSSGKIERYKARLVVKGYSQREGIDFKETFSPVSTKDSFRVIMAIVAHFDLELHQMDVKTAFLNGDLDEEVYMEQPIGFVEVGKEDLVCKLNKSIYGLKQA--SRQC-------GSSYIFLVLYVDDILLASNDPDLLIETKHMLSTHFDMKDLGEASYVLGIKILRDRANGVLKLSQRAYIEKILKRFNMHNCKSTKAPIVKGDK-FSKAQCPQNDDEREEMKTIPYSSVVGSLMYAQVCTRPDIAFVVGMLGRYLSNPGSQHWKAAKKVLSWVCDADFAGCIDDKKSTTGYIFMMAGGAVSWKSVKQTLTASSTMEAEYVACYEACCHAMWMR 1195
BLAST of mRNA_H-elongata_contig110065.824.1 vs. uniprot
Match: A0A2K3LA50_TRIPR (Putative retrotransposon Ty1-copia subclass protein (Fragment) n=2 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3LA50_TRIPR) HSP 1 Score: 199 bits (505), Expect = 2.590e-52 Identity = 138/422 (32.70%), Postives = 210/422 (49.76%), Query Frame = 1
Query: 10 EPRTMGEAQASSEWSQWKRAIAREMDGQISRGVWQVVERPKGKTVLGTRVVFKQKLDKDGRTEKYKCRLVAQGFRQVKCMHYEESYSPTSAQASIRMVLSMIVALGWEARQLDVDMAYLETDVEEEIYIELPEAYRDFRKQ--VGLLKKAMYGLVHA-------------------RLPTQCVFRRILHGIVVVVIVVYVDDLLVASATKHDEEQAVRDLCSCFLIKDLG*ASYYLGCHITRDRNAGTQTFDQHQYIQTMAERFGVTKTS--IIPSVSGGRALPKSDSPQTDAEVEEMRQIPYREIVGTLI-----KRYNIYGALGTLGSPTEG--------------------------NRGGGTNLSAWVDADYGTCPDTRRSVSGGAVMMASGAISWFSRVQKVTAAASSESEYVALAE 1113
+P T +A + E + W A+ EM+ +S VW +V P G +G + VFK K D G E+YK RLVA+GF Q + + Y E++SP S + S R++++++ +E Q+DV A+L +EEE+Y++ PE + + V L +++YGL A + QC+++++ G + +V+YVDD+L+A+ K + + L F +KD+G ASY +G I RDRN G Q YI + ERF + S + P V G R S PQ D E E M+ IPY VG+L+ R +I A+G LG R + + D+DY C DTR+S SG M+ASGA+SW S Q +TA ++ E+E+V+ E
Sbjct: 432 DPETFSQAMSCKESNLWHDAMKEEMNSMVSNKVWDLVTLPNGVKAIGCKWVFKTKRDSQGNIERYKARLVAKGFTQREGIDYTETFSPVSKKDSFRVIMALVAHFNFELHQMDVKTAFLNGSLEEEVYMKQPEGFYSSEGENLVCKLNRSIYGLKQASRQWYLKFHEVITSFGFEENVMDQCIYQKV-SGSHICFLVLYVDDILLATNDKGMLYEVKQFLSRNFDMKDMGEASYVIGIKIHRDRNRGILGLSQEAYINKVLERFNMKNCSPSVAPIVKGDR-FELSQCPQNDFEREHMKNIPYASAVGSLMYAQVCTRPDIAYAVGVLGRYQSNPGVDHWKAAKKVMRYLQGTKNFMLMYKRTDNLEVIGYSDSDYAGCIDTRKSTSGYVFMLASGAVSWRSAKQTLTATSTMEAEFVSCFE 851
BLAST of mRNA_H-elongata_contig110065.824.1 vs. uniprot
Match: A0A2N9EM55_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9EM55_FAGSY) HSP 1 Score: 197 bits (501), Expect = 2.420e-51 Identity = 139/422 (32.94%), Postives = 213/422 (50.47%), Query Frame = 1
Query: 10 EPRTMGEAQASSEWSQWKRAIAREMDGQISRGVWQVVERPKGKTVLGTRVVFKQKLDKDGRTEKYKCRLVAQGFRQVKCMHYEESYSPTSAQASIRMVLSMIVALGWEARQLDVDMAYLETDVEEEIYIELPEAY--RDFRKQVGLLKKAMYGLVHA-------------------RLPTQCVFRRILHGIVVVVIVVYVDDLLVASATKHDEEQAVRDLCSCFLIKDLG*ASYYLGCHITRDRNAGTQTFDQHQYIQTMAERFGVT--KTSIIPSVSGGRALPKSDSPQTDAEVEEMRQIPYREIVGTLI-----KRYNIYGALGTLGSPTEG--------------------------NRGGGTNLSAWVDADYGTCPDTRRSVSGGAVMMASGAISWFSRVQKVTAAASSESEYVALAE 1113
+P +A + E W A+ EM+ S GVW +VE P G +G + VFK K D G E+YK RLVA+GF Q + + Y E++SP S + S+R++L+++ E +Q+DV A+L D+EEE+Y++ PE + D + V LKK++YGL A + QC+++++ G + +V+YVDD+L+A+ K + + L F +KD+G ASY +G I RDR G Q YI + ERF + S+ P V G R + P+ D E E+M+ IPY VG+L+ R +I A+G LG R + + D+D+ C D+R+S SG +MASGA+SW S Q +TA ++ E+E+V+ E
Sbjct: 685 DPEFFSQAMSCKESELWYNAMKEEMNSMKSNGVWDLVELPNGVKAIGCKWVFKTKKDSLGNIERYKARLVAKGFTQKEGIDYTETFSPVSKKDSLRVILALVAHFDLELQQMDVKTAFLNGDLEEEVYMKQPEGFLSSDGEQLVCKLKKSIYGLKQASRQWYLKFHNVISSFGFVENIMDQCIYQKV-SGSKICFLVLYVDDILLATNDKGLLHEVKQFLSKNFDMKDMGEASYVIGIKIHRDRFQGILGLSQETYINKVLERFRMNDCSPSVAPIVKGDR-FNLNQCPKNDLEREQMKNIPYASAVGSLMYAQVCTRPDIAFAVGMLGRYQSDPGLDHWRAAKKVMRYLQGTKDYMLMYRRTDNLEVIGYSDSDFAGCIDSRKSTSGYIFLMASGAVSWRSAKQTLTATSTMEAEFVSCFE 1104
BLAST of mRNA_H-elongata_contig110065.824.1 vs. uniprot
Match: A0A329SK86_9STRA (Integrase catalytic domain-containing protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SK86_9STRA) HSP 1 Score: 195 bits (495), Expect = 3.600e-51 Identity = 139/402 (34.58%), Postives = 214/402 (53.23%), Query Frame = 1
Query: 4 DPEPRTMGEAQASSEWSQWKRAIAREMDGQISRGVWQVVERPKGKTVLGTRVVFKQKLDKDGRTEKYKCRLVAQGFRQVKCMHYEESYSPTSAQASIRMVLSMIVALGWEARQLDVDMAYLETDVEEEIYIELPEAYRDFRKQVGLLKKAMYGLVHA----------------RLPT----QCVFRRILHGIVVVVIVVYVDDLLVASATKHDEEQAVRDLCSCFLIKDLG*ASYYLGCHITRDRNAGTQTFDQHQYIQTMAERFGV--TKTSIIPSVSGGRALPKSDSPQTDAEVEEMRQIPYREIVGTLIKRYNI-YGALGTLGSPTEGNRGGGTNLSAWVDADYGTCPDTRRSVSGGAVMMASGAISWFSRVQKVTAAASSESEYVALAEMVNELRFLR 1140
D P T +A S+E S+W +A+ E+ G W ++ R +G R VF +K D+ GR +YK RLVA+GF+Q + + E+YSP + SIR+VLS++VA + QLDVD A+L +D++E +Y+E+P ++ + L KA+YGL A R+P QCV+ + V V + YVDD+++A + + L S F +K+LG A + LG I +R AG+ Q +Y+ + +RF +KT + P +G + L K SP T+AE ++MR PYR ++GT K Y I Y A G L A+ DAD+G+ D RRSVSG V++ + + S+ Q A +S+E+EY+AL+ E+ + R
Sbjct: 319 DDAPTTYTQAMKSNEASEWVKAMNAELHAHTDYGSWTLIRRNPDARPIGCRWVFAKKRDQHGRVARYKARLVAKGFKQKFGVDFFETYSPVANMNSIRVVLSVVVAKTYVTEQLDVDTAFLNSDLKERVYMEVPYGIKNAENMMCQLNKAIYGLKQAGRERMVQDDPRGVHEDRVPQLRADQCVYVKGKKDKYVYVCL-YVDDMIIAVKNTTEINEVKTALKSAFKMKELGEAKFILGMKIDHNRTAGSLMIKQTRYVDDVVKRFNQEHSKTVVNPCETGMK-LSKLQSPATNAERDDMRSKPYRSLIGT--KEYGIIYDA-----------NNGKVKLEAFTDADWGSNLDDRRSVSGIMVLIGGAPVVFKSKYQCTVALSSAEAEYMALSLCTQEVLWAR 705
BLAST of mRNA_H-elongata_contig110065.824.1 vs. uniprot
Match: A0A445FBE9_GLYSO (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Glycine soja TaxID=3848 RepID=A0A445FBE9_GLYSO) HSP 1 Score: 196 bits (499), Expect = 5.030e-51 Identity = 144/426 (33.80%), Postives = 217/426 (50.94%), Query Frame = 1
Query: 10 EPRTMGEAQASSEWSQWKRAIAREMDGQISRGVWQVVERPKGKTVLGTRVVFKQKLDKDGRTEKYKCRLVAQGFRQVKCMHYEESYSPTSAQASIRMVLSMIVALGWEARQLDVDMAYLETDVEEEIYIELPEAYRDFRKQVG-----LLKKAMYGLVHA-------------------RLPTQCVFRRILHGIVVVVIVVYVDDLLVASATKHDEEQAVRDLCSCFLIKDLG*ASYYLGCHITRDRNAGTQTFDQHQYIQTMAERFGVT--KTSIIPSVSGGRALPKSDSPQTDAEVEEMRQIPYREIVGTLI-----KRYNIYGALGTLGSPTEGNRG--------------GGTN-------------LSAWVDADYGTCPDTRRSVSGGAVMMASGAISWFSRVQKVTAAASSESEYVALAE 1113
+P T +A +S E + W A+ EMD S VW +VE P G +G R VFK K D +G E++K RLVA+GF Q + + Y E++SP S + S+R++L+++ E Q+DV A+L D+EEE+Y++ PE F VG L K++YGL A + C+++++ G + +V+YVDD+L+A+ K + + L F +KD+G ASY +G I R+R+ G Q YI + ERF + S+ P V G + L S P+ D E E M+ IPY VG+L+ R +I A+G LG + N G GT + + D+D+ C D+RRS SG M+ASGA+SW S Q +TA ++ E+E+V+ E
Sbjct: 1045 DPETFSQAMSSKESNLWYNAMRDEMDSMASNQVWDLVELPVGVKAIGCRWVFKTKKDSEGNIERHKARLVAKGFTQREGIDYRETFSPVSKKDSLRVILALVAHFDLELHQMDVKTAFLNGDLEEEVYMKQPEG---FLSSVGEHLVCKLNKSIYGLKQASRQWYLKFHEVISSFSFEENVMDHCIYQKV-SGSKICFLVLYVDDILLATNDKGMLYEVKQFLSKNFDMKDMGEASYVIGIKIHRERSRGILGLSQETYINKVLERFNMKDCSPSVAPIVKGDK-LALSQCPKNDFEREHMKNIPYASAVGSLMYAQVCTRPDIAFAVGVLGR-YQSNPGIDHWKAAKKVMRYLQGTKDYMLMYRQTDCLEVIGYSDSDFAGCVDSRRSTSGYIFMLASGAVSWRSAKQTLTATSTMEAEFVSCFE 1464
BLAST of mRNA_H-elongata_contig110065.824.1 vs. uniprot
Match: A0A445FAJ6_GLYSO (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Glycine soja TaxID=3848 RepID=A0A445FAJ6_GLYSO) HSP 1 Score: 196 bits (499), Expect = 5.550e-51 Identity = 144/426 (33.80%), Postives = 217/426 (50.94%), Query Frame = 1
Query: 10 EPRTMGEAQASSEWSQWKRAIAREMDGQISRGVWQVVERPKGKTVLGTRVVFKQKLDKDGRTEKYKCRLVAQGFRQVKCMHYEESYSPTSAQASIRMVLSMIVALGWEARQLDVDMAYLETDVEEEIYIELPEAYRDFRKQVG-----LLKKAMYGLVHA-------------------RLPTQCVFRRILHGIVVVVIVVYVDDLLVASATKHDEEQAVRDLCSCFLIKDLG*ASYYLGCHITRDRNAGTQTFDQHQYIQTMAERFGVT--KTSIIPSVSGGRALPKSDSPQTDAEVEEMRQIPYREIVGTLI-----KRYNIYGALGTLGSPTEGNRG--------------GGTN-------------LSAWVDADYGTCPDTRRSVSGGAVMMASGAISWFSRVQKVTAAASSESEYVALAE 1113
+P T +A +S E + W A+ EMD S VW +VE P G +G R VFK K D +G E++K RLVA+GF Q + + Y E++SP S + S+R++L+++ E Q+DV A+L D+EEE+Y++ PE F VG L K++YGL A + C+++++ G + +V+YVDD+L+A+ K + + L F +KD+G ASY +G I R+R+ G Q YI + ERF + S+ P V G + L S P+ D E E M+ IPY VG+L+ R +I A+G LG + N G GT + + D+D+ C D+RRS SG M+ASGA+SW S Q +TA ++ E+E+V+ E
Sbjct: 1819 DPETFSQAMSSKESNLWYNAMRDEMDSMASNQVWDLVELPVGVKAIGCRWVFKTKKDSEGNIERHKARLVAKGFTQREGIDYRETFSPVSKKDSLRVILALVAHFDLELHQMDVKTAFLNGDLEEEVYMKQPEG---FLSSVGEHLVCKLNKSIYGLKQASRQWYLKFHEVISSFSFEENVMDHCIYQKV-SGSKICFLVLYVDDILLATNDKGMLYEVKQFLSKNFDMKDMGEASYVIGIKIHRERSRGILGLSQETYINKVLERFNMKDCSPSVAPIVKGDK-LALSQCPKNDFEREHMKNIPYASAVGSLMYAQVCTRPDIAFAVGVLGR-YQSNPGIDHWKAAKKVMRYLQGTKDYMLMYRQTDCLEVIGYSDSDFAGCVDSRRSTSGYIFMLASGAVSWRSAKQTLTATSTMEAEFVSCFE 2238
BLAST of mRNA_H-elongata_contig110065.824.1 vs. uniprot
Match: A0A2N9GK36_FAGSY (Uncharacterized protein n=10 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9GK36_FAGSY) HSP 1 Score: 195 bits (495), Expect = 1.530e-50 Identity = 138/422 (32.70%), Postives = 212/422 (50.24%), Query Frame = 1
Query: 10 EPRTMGEAQASSEWSQWKRAIAREMDGQISRGVWQVVERPKGKTVLGTRVVFKQKLDKDGRTEKYKCRLVAQGFRQVKCMHYEESYSPTSAQASIRMVLSMIVALGWEARQLDVDMAYLETDVEEEIYIELPEAY--RDFRKQVGLLKKAMYGLVHA-------------------RLPTQCVFRRILHGIVVVVIVVYVDDLLVASATKHDEEQAVRDLCSCFLIKDLG*ASYYLGCHITRDRNAGTQTFDQHQYIQTMAERFGVT--KTSIIPSVSGGRALPKSDSPQTDAEVEEMRQIPYREIVGTLI-----KRYNIYGALGTLGSPTEG--------------------------NRGGGTNLSAWVDADYGTCPDTRRSVSGGAVMMASGAISWFSRVQKVTAAASSESEYVALAE 1113
+P + +A + E W A+ EM+ S GVW +VE P G +G + VFK K D G E+YK RLVA+GF Q + + Y E++SP S + S+R++L+++ E +Q+DV A+L D+EEE+Y++ PE + D V LKK++YGL A + QC+++++ G + +V+YVDD+L+A+ K + + L F +KD+G ASY +G I RDR G Q YI + +RF + S+ P V G R + P+ D E E+M+ IPY VG+L+ R +I A+G LG R + + D+D+ C D+R+S SG MMASGA+SW S Q + A ++ E+E+V+ E
Sbjct: 726 DPESFSQAMSCKESELWYNAMKEEMNSMKSNGVWDLVELPNGVKAIGCKWVFKTKKDSLGNIERYKARLVAKGFTQKEGIDYTETFSPVSKKDSLRIILALVAHFDLELQQMDVKTAFLNGDLEEEVYMKQPEGFPSSDGEHLVCKLKKSIYGLKQASRQWYLKFHNVISSFGFVENIMDQCIYQKV-SGSKICFLVLYVDDILLATNDKGLLHEVKQFLSKNFDMKDMGEASYVIGIKIHRDRFQGILGLSQETYINKILKRFRMNDCSPSVAPIVKGDR-FNLNQCPKNDLEREQMKNIPYASAVGSLMYAQVCTRPDIAFAVGMLGRYQSDPGLDHWRAAKKVMRYLQGTKDYMLMYRRTDNLEVIGYSDSDFAGCIDSRKSTSGYIFMMASGAVSWRSAKQTLIATSTMEAEFVSCFE 1145
BLAST of mRNA_H-elongata_contig110065.824.1 vs. uniprot
Match: A0A2N9I7X4_FAGSY (Integrase catalytic domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9I7X4_FAGSY) HSP 1 Score: 193 bits (490), Expect = 3.690e-50 Identity = 137/422 (32.46%), Postives = 212/422 (50.24%), Query Frame = 1
Query: 10 EPRTMGEAQASSEWSQWKRAIAREMDGQISRGVWQVVERPKGKTVLGTRVVFKQKLDKDGRTEKYKCRLVAQGFRQVKCMHYEESYSPTSAQASIRMVLSMIVALGWEARQLDVDMAYLETDVEEEIYIELPEAY--RDFRKQVGLLKKAMYGLVHA-------------------RLPTQCVFRRILHGIVVVVIVVYVDDLLVASATKHDEEQAVRDLCSCFLIKDLG*ASYYLGCHITRDRNAGTQTFDQHQYIQTMAERFGVT--KTSIIPSVSGGRALPKSDSPQTDAEVEEMRQIPYREIVGTLI-----KRYNIYGALGTLGSPTEG--------------------------NRGGGTNLSAWVDADYGTCPDTRRSVSGGAVMMASGAISWFSRVQKVTAAASSESEYVALAE 1113
+P++ +A + E W A+ EM+ S GVW +VE P G +G + VFK K D G E+YK LVA+GF Q + + Y E++SP S + S+R++L+++ E +Q+DV A+L D+EEE+Y++ PE + D V LKK++YGL A + QC+++++ G + +V+YVDD+L+A+ K + + L F +KD+G ASY +G I RDR G Q YI + +RF + S+ P V G R + P+ D E E+M+ IPY VG+L+ R +I A+G LG R + + D+D+ C D+R+S SG MMASGA+SW S Q + A ++ E+E+V+ E
Sbjct: 390 DPKSFSQAMSCKESELWYNAMKEEMNSMKSNGVWDLVELPNGVKAIGCKWVFKTKKDSLGNIERYKAILVAKGFTQKEGIDYTETFSPVSKKDSLRIILALVAHFDLELQQMDVKTAFLNGDLEEEVYMKQPEGFPSSDGEHLVCKLKKSIYGLKQASRQWYLKFHNVISSFGFVENIMDQCIYQKV-SGSKICFLVLYVDDILLATNDKGLLHEVKQFLSKNFDMKDMGEASYVIGIKIHRDRFQGILGLSQETYINKILKRFRMNDCSPSVAPIVKGDR-FNLNQCPKNDLEREQMKNIPYASAVGSLMYAQVCTRPDIAFAVGMLGRYQSDPGLDHWRAAKKVMRYLQGTKDYMLMYRRTNNLEVIGYSDSDFAGCIDSRKSTSGYIFMMASGAVSWRSAKQTLIATSTMEAEFVSCFE 809
BLAST of mRNA_H-elongata_contig110065.824.1 vs. uniprot
Match: A0A438HUL4_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Vitis vinifera TaxID=29760 RepID=A0A438HUL4_VITVI) HSP 1 Score: 187 bits (475), Expect = 6.460e-50 Identity = 133/433 (30.72%), Postives = 218/433 (50.35%), Query Frame = 1
Query: 1 LDPEPRTMGEAQASSEWSQWKRAIAREMDGQISRGVWQVVERPKGKTVLGTRVVFKQKLDKDGRTEKYKCRLVAQGFRQVKCMHYEESYSPTSAQASIRMVLSMIVALGWEARQLDVDMAYLETDVEEEIYIELPEAYR--DFRKQVGLLKKAMYGLVHA-------------------RLPTQCVFRRILHGIVVVVIVVYVDDLLVASATKHDEEQAVRDLCSCFLIKDLG*ASYYLGCHITRDRNAGTQTFDQHQYIQTMAERFGVTKTSIIPS-VSGGRALPKSDSPQTDAEVEEMRQIPYREIVGTLI-----KRYNIYGALGTLGSPTEG--------------------------NRGGGTNLSAWVDADYGTCPDTRRSVSGGAVMMASGAISWFSRVQKVTAAASSESEYVALAEMVNELRFLR 1140
L+ +P ++ + + SS +W +A+ EM GVW +VE PKG +G + +FK K D G +YK RLVA+GF Q + + Y+E++SP S++ S R++++++ E Q+DV A+L +++E IY+ PE + D ++ V LK+++YGL A QC++ + G +++V+YVDD+L+AS+ + +R L S F +KDLG AS+ LG I RDR+ G Q YI + RFG++ + + V+ G P+ + E ++M + PY VG+L+ R +I +G LG R + A+ D+D+ C D+RRS SG M+A GA+SW S Q + A+++ E+E++A E N +LR
Sbjct: 3 LEDDPISLSQVKQSSNSEKWIKAMKDEMKSMKDNGVWDLVELPKGVKPIGCKWIFKTKRDSKGNIVRYKARLVAKGFTQKEGIDYKETFSPVSSKDSFRIIMALVAHYDLELHQMDVKTAFLNGNIDETIYMVQPENFESNDSKQLVCRLKRSIYGLKQASRQWYRKFDQVITSFGFKENTVDQCIYLKF-SGSKFIILVLYVDDILLASSDVGLLHETMRFLSSKFDMKDLGNASFVLGIQIHRDRSRGILGLSQKAYIDKVLSRFGMSNYAPGDTPVAKGDKFSLHQCPKNELEKKDMERFPYASAVGSLMYAQVCTRPDIAYIVGMLGRYLSNPGMDHWKKAKRVMRYLQRTKDYMLTYRRSSHLEIVAYSDSDFAGCLDSRRSTSGCIFMLAGGAVSWKSVKQTLVASSTMEAEFIACYEASNHGIWLR 434
BLAST of mRNA_H-elongata_contig110065.824.1 vs. uniprot
Match: A0A2G8RWY5_9APHY (Transcription factor n=1 Tax=Ganoderma sinense ZZ0214-1 TaxID=1077348 RepID=A0A2G8RWY5_9APHY) HSP 1 Score: 193 bits (490), Expect = 7.580e-50 Identity = 149/447 (33.33%), Postives = 219/447 (48.99%), Query Frame = 1
Query: 10 EPRTMGEAQASSEWSQWKRAIAREMDGQISRGVWQVVERPKGKTVLGTRVVFKQKLDKDGRTEKYKCRLVAQGFRQV--KCMHYEESYSPTSAQASIRMVLSMIVALGWEARQLDVDMAYLETDVEEEIYIELPEAYRDFRKQ--VGLLKKAMYGLVHARLP--------------TQCV------FRRILHGIVVVVIVVYVDDLLVASATKHDEEQAVRDLCSCFLIKDLG*ASYYLGCHITRDRNAGTQTFDQHQYIQTMAERFGVTKTSIIP-SVSGGRALPKSDSPQTDAEVEEMRQIPYREIVGTLIKRYNIYGALGTLGSPT----------------------------EGNRG----GGTN---LSAWVDADYGTCPDTRRSVSGGAVMMASGAISWFSRVQKVTAAASSESEYVALAEMVNELRFLRQV-KDFMIPQ 1167
+PRT+ EA+ S +W QW+RAI E D V+ +VE P ++G+++VF+ K D +G +K RLVAQGF QV + H +E+++P S SIR +LS+ WE RQ+DV AYL +EE +Y+ LP + + V LKK +YGL A T+CV ++R G +++ VDDL + + + AV D+ F + DLG + LG + RDR A T Q YI T+ RF + + + + + G L SP T + E+MR +PYRE VG+L +Y A+GT T +G+R GTN L + DAD+G+ + R S+SG + GAISW S+ Q V A +S+E+EY+AL E +LR V D + P+
Sbjct: 1027 DPRTLEEARQSPDWPQWQRAIDAEYDNLRRHDVFDLVEPPPDANIVGSKLVFRVKHDAEGAVSGFKARLVAQGFSQVPGRDYHDDETFAPVSRLPSIRTILSLAARHDWELRQMDVKSAYLNGILEETVYMRLPPGFAPPEQSHLVCRLKKTLYGLKQAGRGWYKTLTAAMENMGFTRCVADHAVFYKR--EGESAIIVAASVDDLTITGTSDLVDAFAV-DIKQRFEMSDLGDLHWILGIEVRRDRQARTIAISQRSYIDTIVSRFNLDEAAPLSIPLQPGSPLGNHQSPSTPRQFEDMRDVPYREAVGSL-----MYAAMGTRPDITFAVTALSQFMQNPGRAHWDALKRVLRYLKGSRELWLVYGTNNEGLRGYSDADWGSSTEHRHSISGYVFTLDGGAISWSSKKQNVVALSSTEAEYIALTHATKEAIWLRYVLSDILHPE 1465 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig110065.824.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig110065.824.1 >prot_H-elongata_contig110065.824.1 ID=prot_H-elongata_contig110065.824.1|Name=mRNA_H-elongata_contig110065.824.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=206bp MGEAQASSEWSQWKRAIAREMDGQISRGVWQVVERPKGKTVLGTRVVFKQback to top mRNA from alignment at H-elongata_contig110065:575..2109+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig110065.824.1 ID=mRNA_H-elongata_contig110065.824.1|Name=mRNA_H-elongata_contig110065.824.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1535bp|location=Sequence derived from alignment at H-elongata_contig110065:575..2109+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig110065:575..2109+ >mRNA_H-elongata_contig110065.824.1 ID=mRNA_H-elongata_contig110065.824.1|Name=mRNA_H-elongata_contig110065.824.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1236bp|location=Sequence derived from alignment at H-elongata_contig110065:575..2109+ (Himanthalia elongata Himel1 dioecious)back to top |