mRNA_H-elongata_contig109553.774.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig109553.774.1 vs. uniprot
Match: D7G9A1_ECTSI (Cellulose synthase (UDP-forming), family GT2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9A1_ECTSI) HSP 1 Score: 343 bits (879), Expect = 1.200e-111 Identity = 158/225 (70.22%), Postives = 187/225 (83.11%), Query Frame = 1
Query: 1 AARVARDAPDFGVAIWGKDFSPQDHGDIKRRLERRGYEPTVDVFLPVCKEPAYLLANTWKHISALDYPDFSVFVLDDGDNEEVKALAEAFGFTYLVRPNRPSLKKAGNLRHAFTQTSGEVIAIFDADFCPRPDFLKETIPYFGHDASIGIVQTPQYFRYRKEQTWIEQGAGISQEYFYRLVQAILLLVNQDRFNAAVCVGSCGLYRRAALEPFGGMAAIGHSEDM 675
A +V A D GVAIWGKDF P+ H ++ + E +GY P+VDVFLP+CKEP LLANTWK+++ALDYPDF VFVLDDG +E +ALA FGF Y++R + P+LKKAGNLR+AF +TSGE IAIFDADFCPR DFLKET+PY G D +IGIVQTPQ+FR+RKEQTW+EQGAG++QE+FYR+VQ +NQDRFNAAVCVGSCGLYRRAALEP GGMAAI HSEDM
Sbjct: 443 AEQVVAGADDLGVAIWGKDFKPEVHAEVLKASEEKGYRPSVDVFLPMCKEPLRLLANTWKYVAALDYPDFKVFVLDDGASEGAQALASTFGFEYVLRADVPALKKAGNLRNAFARTSGEAIAIFDADFCPRADFLKETVPYLGEDPTIGIVQTPQFFRHRKEQTWVEQGAGVTQEFFYRMVQ-----MNQDRFNAAVCVGSCGLYRRAALEPLGGMAAIEHSEDM 662
BLAST of mRNA_H-elongata_contig109553.774.1 vs. uniprot
Match: D7G9A2_ECTSI (Cellulose synthase (UDP-forming), family GT2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9A2_ECTSI) HSP 1 Score: 352 bits (904), Expect = 7.210e-111 Identity = 161/215 (74.88%), Postives = 185/215 (86.05%), Query Frame = 1
Query: 31 FGVAIWGKDFSPQDHGDIKRRLERRGYEPTVDVFLPVCKEPAYLLANTWKHISALDYPDFSVFVLDDGDNEEVKALAEAFGFTYLVRPNRPSLKKAGNLRHAFTQTSGEVIAIFDADFCPRPDFLKETIPYFGHDASIGIVQTPQYFRYRKEQTWIEQGAGISQEYFYRLVQAILLLVNQDRFNAAVCVGSCGLYRRAALEPFGGMAAIGHSEDM 675
G+AIWG+DF P+ H ++ R + +GY P+VDVFLPVCKEP YLLANTW+H++ALDYPDF VFVLDDG ++EV ALA FGF Y+VR + P+LKKAGNLR+AF +TSGE IAIFDADFCPRPDFLKET+PYFG D +IGIVQTPQYFR+RKEQTWIEQGAG+SQE+FYR+VQ VNQDRFNAAVCVGSCGLYRR ALEP GGMAAI HSEDM
Sbjct: 734 LGIAIWGRDFKPEVHTEVLRASQEKGYRPSVDVFLPVCKEPLYLLANTWQHVAALDYPDFKVFVLDDGASDEVAALASKFGFEYVVREDAPALKKAGNLRNAFARTSGEAIAIFDADFCPRPDFLKETVPYFGEDPTIGIVQTPQYFRHRKEQTWIEQGAGVSQEFFYRMVQ-----VNQDRFNAAVCVGSCGLYRRTALEPLGGMAAIEHSEDM 943
BLAST of mRNA_H-elongata_contig109553.774.1 vs. uniprot
Match: D7G9A6_ECTSI (Cellulose synthase (UDP-forming), family GT2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G9A6_ECTSI) HSP 1 Score: 347 bits (890), Expect = 4.420e-109 Identity = 158/216 (73.15%), Postives = 183/216 (84.72%), Query Frame = 1
Query: 28 DFGVAIWGKDFSPQDHGDIKRRLERRGYEPTVDVFLPVCKEPAYLLANTWKHISALDYPDFSVFVLDDGDNEEVKALAEAFGFTYLVRPNRPSLKKAGNLRHAFTQTSGEVIAIFDADFCPRPDFLKETIPYFGHDASIGIVQTPQYFRYRKEQTWIEQGAGISQEYFYRLVQAILLLVNQDRFNAAVCVGSCGLYRRAALEPFGGMAAIGHSEDM 675
DFG+A+WG+DF +H ++ + E +GY P+VDVFLPVCKEP YLLANTWK+++ALDYPDF VFVLDDG ++EVKALA FGF Y++R N P LKKAGNLR+AF TSGE IAIFDADFCPRP+FLKET+PYFG D +IGIVQTPQ+FR R EQTWIEQGAG+SQE+FYR+VQ +NQDRFNAAVCVGSCGLYRR ALEP GGMAAI HSEDM
Sbjct: 694 DFGIAMWGRDFKLDEHAEVLKASEEKGYMPSVDVFLPVCKEPLYLLANTWKYVAALDYPDFKVFVLDDGASDEVKALASVFGFEYVLRSNAPELKKAGNLRNAFAMTSGEAIAIFDADFCPRPEFLKETVPYFGEDPTIGIVQTPQFFRVRDEQTWIEQGAGVSQEFFYRMVQ-----MNQDRFNAAVCVGSCGLYRRTALEPLGGMAAIEHSEDM 904
BLAST of mRNA_H-elongata_contig109553.774.1 vs. uniprot
Match: A0A6H5K7X7_9PHAE (GT2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7X7_9PHAE) HSP 1 Score: 330 bits (847), Expect = 3.980e-102 Identity = 163/254 (64.17%), Postives = 185/254 (72.83%), Query Frame = 1
Query: 31 FGVAIWGKDFSPQDHGDIKRRLERRGYEPTVDVFLPVCKEPAYLLANTWKHISALDYPDFSVFVLDDGDNEEVKALAEAFGF----------TYLV-----------------------------RPNRPSLKKAGNLRHAFTQTSGEVIAIFDADFCPRPDFLKETIPYFGHDASIGIVQTPQYFRYRKEQTWIEQGAGISQEYFYRLVQAILLLVNQDRFNAAVCVGSCGLYRRAALEPFGGMAAIGHSEDM 675
GVAIWG+DF P+ H ++ R E +GY P+VDVFLPVCKEP +LLANTW+H++ALDYPDF VFVLDDG ++EVKALA FGF TY V R + P+LKKAGNLR+AF +TSGE IAIFDADFCPR DFLKET+PYFG D +IGIVQTPQYFR+RKEQTWIEQGAG+SQE+FYR+VQ VNQDRFNAAVCVGSCGLYRR ALEP GGMAAI HSEDM
Sbjct: 797 LGVAIWGRDFKPEVHAEVLRASEEKGYRPSVDVFLPVCKEPLHLLANTWQHVAALDYPDFKVFVLDDGASDEVKALASKFGFESRYVPSPIVTYFVLSRPPYRYCSMLLPDAATHCCRGIAEDVLREDAPALKKAGNLRNAFARTSGEAIAIFDADFCPRADFLKETVPYFGEDPTIGIVQTPQYFRHRKEQTWIEQGAGVSQEFFYRMVQ-----VNQDRFNAAVCVGSCGLYRRTALEPLGGMAAIEHSEDM 1045
BLAST of mRNA_H-elongata_contig109553.774.1 vs. uniprot
Match: D7FQH7_ECTSI (Cellulose synthase (UDP-forming), family GT2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQH7_ECTSI) HSP 1 Score: 313 bits (802), Expect = 8.790e-99 Identity = 149/215 (69.30%), Postives = 171/215 (79.53%), Query Frame = 1
Query: 31 FGVAIWGKDFSPQDHGDIKRRLERRGYEPTVDVFLPVCKEPAYLLANTWKHISALDYPDFSVFVLDDGDNEEVKALAEAFGFTYLVRPNRPSLKKAGNLRHAFTQTSGEVIAIFDADFCPRPDFLKETIPYFGHDASIGIVQTPQYFRYRKEQTWIEQGAGISQEYFYRLVQAILLLVNQDRFNAAVCVGSCGLYRRAALEPFGGMAAIGHSEDM 675
FGV+IWG+DF P+ H + R + PTVDVFLPVC EPA LLANTW H+ A+DYP +V VLDDG +EVKALA +GF Y+ R NRP LKKAGNLRHAF +TSGEVI IFDADFCPRPDFL+ET+PY D SIGI+QTPQ+FR R+EQTW+EQGAG SQE+FYRL+Q VN DRFNAAVCVGSCGLYRR A+EPFGG+A I HSEDM
Sbjct: 423 FGVSIWGRDFDPEIHACVVRHGLDVAFSPTVDVFLPVCNEPAVLLANTWNHVLAMDYPHVTVHVLDDGAKDEVKALAGEYGFQYIRRDNRPELKKAGNLRHAFARTSGEVIVIFDADFCPRPDFLRETLPYLV-DPSIGILQTPQFFRRREEQTWVEQGAGASQEHFYRLIQ-----VNLDRFNAAVCVGSCGLYRRTAVEPFGGVAPIEHSEDM 631
BLAST of mRNA_H-elongata_contig109553.774.1 vs. uniprot
Match: D7FP53_ECTSI (Cellulose synthase (UDP-forming), family GT2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP53_ECTSI) HSP 1 Score: 283 bits (724), Expect = 5.810e-85 Identity = 136/248 (54.84%), Postives = 173/248 (69.76%), Query Frame = 1
Query: 31 FGVAIWGKDFSPQDHGDIKRRLERRGYEPTVDVFLPVCKEPAYLLANTWKHISALDYPDFSVFVLDDGDNEEVKALAEAFGF---------------------------------TYLVRPNRPSLKKAGNLRHAFTQTSGEVIAIFDADFCPRPDFLKETIPYFGHDASIGIVQTPQYFRYRKEQTWIEQGAGISQEYFYRLVQAILLLVNQDRFNAAVCVGSCGLYRRAALEPFGGMAAIGHSEDM 675
FGVA+WGKDF P+DH R+ + Y P+VD+FLPVC+EP +LL NTWK++ ALDYP+ +V VLDDG EEV+ LAE GF T + R N P LKKAGNLR+AF +TSGEV+ IFDADFCPRP+FLKET PYF D + I+QTPQ+FRYR+EQTW+E+GAG++QE FYR+VQ VN+++F+A++CVG+CG+YRR AL PFGG AAIG+SED+
Sbjct: 751 FGVAVWGKDFDPEDHAARIRKAQHEHYYPSVDIFLPVCREPTHLLDNTWKYVRALDYPNVTVHVLDDGAKEEVRQLAEMHGFQSSPFGATKAHREQPEWLAWWECERVALRRSRFTDIRRTNIPELKKAGNLRYAFARTSGEVLVIFDADFCPRPEFLKETTPYFK-DRDVAILQTPQFFRYREEQTWVEKGAGVTQELFYRMVQ-----VNRNKFDASICVGTCGVYRREALAPFGGTAAIGYSEDV 992
BLAST of mRNA_H-elongata_contig109553.774.1 vs. uniprot
Match: A0A6H5KYP8_9PHAE (GT2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYP8_9PHAE) HSP 1 Score: 274 bits (700), Expect = 4.310e-82 Identity = 133/239 (55.65%), Postives = 169/239 (70.71%), Query Frame = 1
Query: 31 FGVAIWGKDFSPQDHGDIKRRLERRGYEPTVDVFLPVCKEPAYLLANTWKHISALDYPDFSVFVLDDGDNEEVKA------------------LAEAFGFTY------LVRPNRPSLKKAGNLRHAFTQTSGEVIAIFDADFCPRPDFLKETIPYFGHDASIGIVQTPQYFRYRKEQTWIEQGAGISQEYFYRLVQAILLLVNQDRFNAAVCVGSCGLYRRAALEPFGGMAAIGHSEDM 675
FGVA+WGKDF P+DH R+ + Y P+VD+FLPVC+EP +LL NTWK++ ALDYP+ +V VLDDG EE +A A T + R N P LKKAGNLR+AF +TSGEV+ IFDADFCPRP+FLKET PYF D + I+QTPQ+FRYR+EQTW+E+GAG++QE FYR+VQ VN+D+F+A++CVG+CG+YRR AL PFGG AAIG+SED+
Sbjct: 696 FGVAVWGKDFDPEDHAARLRKAQHEHYYPSVDIFLPVCREPTHLLDNTWKYVRALDYPNVTVHVLDDGAKEERRASERENTCDRAPIVSCKVQTMHASQNTLETETADIRRTNIPELKKAGNLRYAFARTSGEVLVIFDADFCPRPEFLKETTPYFK-DRDVAILQTPQFFRYREEQTWVEKGAGVTQELFYRMVQ-----VNRDKFDASICVGTCGVYRREALAPFGGTAAIGYSEDV 928
BLAST of mRNA_H-elongata_contig109553.774.1 vs. uniprot
Match: A0A4Y7TTX0_9AGAR (Nucleotide-diphospho-sugar transferase n=1 Tax=Coprinellus micaceus TaxID=71717 RepID=A0A4Y7TTX0_9AGAR) HSP 1 Score: 253 bits (647), Expect = 1.980e-78 Identity = 124/217 (57.14%), Postives = 153/217 (70.51%), Query Frame = 1
Query: 31 FGVAIWGKDFSPQDHGDIKRRLERRGYE--PTVDVFLPVCKEPAYLLANTWKHISALDYPDFSVFVLDDGDNEEVKALAEAFGFTYLVRPNRPSLKKAGNLRHAFTQTSGEVIAIFDADFCPRPDFLKETIPYFGHDASIGIVQTPQYFRYRKEQTWIEQGAGISQEYFYRLVQAILLLVNQDRFNAAVCVGSCGLYRRAALEPFGGMAAIGHSEDM 675
+ + G+DF + H I + E P+VDV+LP CKEP +L NT++++S +DYP+ V+VLDDGD E V+ LA A+GF Y+ RPNR LKKAGNLRHAFTQT+G+ IFDADFCPR D LKE IP H+ I IVQTPQ+FR +EQTW EQGA +QE+FYR+VQ VN+DRFNAA+CVGS LYRR AL GG A IGHSED+
Sbjct: 80 YFIGFCGRDFDLEGHKKIVEEHAIKDDEECPSVDVYLPCCKEPIEILENTYRYVSKIDYPNLKVWVLDDGDMESVRRLAAAYGFNYICRPNRGHLKKAGNLRHAFTQTNGDFFLIFDADFCPRADILKEMIPRVRHEPKIAIVQTPQFFRPCEEQTWSEQGASATQEFFYRIVQ-----VNRDRFNAAICVGSNALYRRQALVDVGGTAEIGHSEDV 291
BLAST of mRNA_H-elongata_contig109553.774.1 vs. uniprot
Match: A0A8H6I364_9AGAR (Nucleotide-diphospho-sugar transferase n=1 Tax=Tulosesus angulatus TaxID=980116 RepID=A0A8H6I364_9AGAR) HSP 1 Score: 247 bits (631), Expect = 4.510e-76 Identity = 122/217 (56.22%), Postives = 149/217 (68.66%), Query Frame = 1
Query: 31 FGVAIWGKDFSPQDHGDIKRRLERRGYEP--TVDVFLPVCKEPAYLLANTWKHISALDYPDFSVFVLDDGDNEEVKALAEAFGFTYLVRPNRPSLKKAGNLRHAFTQTSGEVIAIFDADFCPRPDFLKETIPYFGHDASIGIVQTPQYFRYRKEQTWIEQGAGISQEYFYRLVQAILLLVNQDRFNAAVCVGSCGLYRRAALEPFGGMAAIGHSEDM 675
+ V GKDF H I + EP +VDV+LP CKEP +L NT+K+++ +DYP+ V+VLDDG + VK LA A+GF Y+ R NRP LKKAGNLR+AFT+T G+ IFDADFCPR D LK+ IP HD +I IVQTPQ+FR EQTW EQGA +QE+FYR+VQ VN+DRF AA+CVGS LYRR AL GG A IGHSED+
Sbjct: 79 YFVGFCGKDFDIPGHKKIVEEYAVKDNEPCPSVDVYLPCCKEPIEILENTYKYVAKIDYPNLKVWVLDDGGMDSVKRLATAYGFNYICRDNRPELKKAGNLRYAFTRTEGDFFLIFDADFCPRADILKDMIPRMRHDPNIAIVQTPQFFRPCAEQTWCEQGASATQEFFYRIVQ-----VNRDRFGAAICVGSNALYRREALVDVGGTAEIGHSEDV 290
BLAST of mRNA_H-elongata_contig109553.774.1 vs. uniprot
Match: A0A4Q2DZ04_9AGAR (Glyco_trans_2-like domain-containing protein n=1 Tax=Candolleomyces aberdarensis TaxID=2316362 RepID=A0A4Q2DZ04_9AGAR) HSP 1 Score: 253 bits (646), Expect = 8.210e-76 Identity = 125/217 (57.60%), Postives = 152/217 (70.05%), Query Frame = 1
Query: 31 FGVAIWGKDFSPQDHGDIKRRLERRGYE--PTVDVFLPVCKEPAYLLANTWKHISALDYPDFSVFVLDDGDNEEVKALAEAFGFTYLVRPNRPSLKKAGNLRHAFTQTSGEVIAIFDADFCPRPDFLKETIPYFGHDASIGIVQTPQYFRYRKEQTWIEQGAGISQEYFYRLVQAILLLVNQDRFNAAVCVGSCGLYRRAALEPFGGMAAIGHSEDM 675
+ V GKDF + H I + E P+VDV+LP CKEP +L NT+K++S +DYP+ V+VLDDG + VK LA A+GF Y+ R NRP LKKAGNLR+AFT+T G+ IFDADFCPR D LK+ IP HD +I IVQTPQ+FR KEQTW EQGA +QE+FYR+VQ VN+DRF AA+CVGS LYRRAAL GG A IGHSED+
Sbjct: 363 YFVGFCGKDFDVKGHKKIVEEFAVKDNEECPSVDVYLPCCKEPIEILENTYKYVSKIDYPNLKVWVLDDGAMDSVKRLATAYGFNYICRDNRPHLKKAGNLRYAFTRTEGDFFLIFDADFCPRADILKDMIPRVRHDPNIAIVQTPQFFRPCKEQTWTEQGASATQEFFYRIVQ-----VNRDRFGAAICVGSNALYRRAALVDVGGTAEIGHSEDV 574 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig109553.774.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig109553.774.1 >prot_H-elongata_contig109553.774.1 ID=prot_H-elongata_contig109553.774.1|Name=mRNA_H-elongata_contig109553.774.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=225bp AARVARDAPDFGVAIWGKDFSPQDHGDIKRRLERRGYEPTVDVFLPVCKEback to top mRNA from alignment at H-elongata_contig109553:508..2190+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig109553.774.1 ID=mRNA_H-elongata_contig109553.774.1|Name=mRNA_H-elongata_contig109553.774.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1683bp|location=Sequence derived from alignment at H-elongata_contig109553:508..2190+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig109553:508..2190+ >mRNA_H-elongata_contig109553.774.1 ID=mRNA_H-elongata_contig109553.774.1|Name=mRNA_H-elongata_contig109553.774.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1350bp|location=Sequence derived from alignment at H-elongata_contig109553:508..2190+ (Himanthalia elongata Himel1 dioecious)back to top |