mRNA_H-elongata_contig109553.774.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig109553.774.1
Unique NamemRNA_H-elongata_contig109553.774.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig109553.774.1 vs. uniprot
Match: D7G9A1_ECTSI (Cellulose synthase (UDP-forming), family GT2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9A1_ECTSI)

HSP 1 Score: 343 bits (879), Expect = 1.200e-111
Identity = 158/225 (70.22%), Postives = 187/225 (83.11%), Query Frame = 1
Query:    1 AARVARDAPDFGVAIWGKDFSPQDHGDIKRRLERRGYEPTVDVFLPVCKEPAYLLANTWKHISALDYPDFSVFVLDDGDNEEVKALAEAFGFTYLVRPNRPSLKKAGNLRHAFTQTSGEVIAIFDADFCPRPDFLKETIPYFGHDASIGIVQTPQYFRYRKEQTWIEQGAGISQEYFYRLVQAILLLVNQDRFNAAVCVGSCGLYRRAALEPFGGMAAIGHSEDM 675
            A +V   A D GVAIWGKDF P+ H ++ +  E +GY P+VDVFLP+CKEP  LLANTWK+++ALDYPDF VFVLDDG +E  +ALA  FGF Y++R + P+LKKAGNLR+AF +TSGE IAIFDADFCPR DFLKET+PY G D +IGIVQTPQ+FR+RKEQTW+EQGAG++QE+FYR+VQ     +NQDRFNAAVCVGSCGLYRRAALEP GGMAAI HSEDM
Sbjct:  443 AEQVVAGADDLGVAIWGKDFKPEVHAEVLKASEEKGYRPSVDVFLPMCKEPLRLLANTWKYVAALDYPDFKVFVLDDGASEGAQALASTFGFEYVLRADVPALKKAGNLRNAFARTSGEAIAIFDADFCPRADFLKETVPYLGEDPTIGIVQTPQFFRHRKEQTWVEQGAGVTQEFFYRMVQ-----MNQDRFNAAVCVGSCGLYRRAALEPLGGMAAIEHSEDM 662          
BLAST of mRNA_H-elongata_contig109553.774.1 vs. uniprot
Match: D7G9A2_ECTSI (Cellulose synthase (UDP-forming), family GT2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9A2_ECTSI)

HSP 1 Score: 352 bits (904), Expect = 7.210e-111
Identity = 161/215 (74.88%), Postives = 185/215 (86.05%), Query Frame = 1
Query:   31 FGVAIWGKDFSPQDHGDIKRRLERRGYEPTVDVFLPVCKEPAYLLANTWKHISALDYPDFSVFVLDDGDNEEVKALAEAFGFTYLVRPNRPSLKKAGNLRHAFTQTSGEVIAIFDADFCPRPDFLKETIPYFGHDASIGIVQTPQYFRYRKEQTWIEQGAGISQEYFYRLVQAILLLVNQDRFNAAVCVGSCGLYRRAALEPFGGMAAIGHSEDM 675
             G+AIWG+DF P+ H ++ R  + +GY P+VDVFLPVCKEP YLLANTW+H++ALDYPDF VFVLDDG ++EV ALA  FGF Y+VR + P+LKKAGNLR+AF +TSGE IAIFDADFCPRPDFLKET+PYFG D +IGIVQTPQYFR+RKEQTWIEQGAG+SQE+FYR+VQ     VNQDRFNAAVCVGSCGLYRR ALEP GGMAAI HSEDM
Sbjct:  734 LGIAIWGRDFKPEVHTEVLRASQEKGYRPSVDVFLPVCKEPLYLLANTWQHVAALDYPDFKVFVLDDGASDEVAALASKFGFEYVVREDAPALKKAGNLRNAFARTSGEAIAIFDADFCPRPDFLKETVPYFGEDPTIGIVQTPQYFRHRKEQTWIEQGAGVSQEFFYRMVQ-----VNQDRFNAAVCVGSCGLYRRTALEPLGGMAAIEHSEDM 943          
BLAST of mRNA_H-elongata_contig109553.774.1 vs. uniprot
Match: D7G9A6_ECTSI (Cellulose synthase (UDP-forming), family GT2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G9A6_ECTSI)

HSP 1 Score: 347 bits (890), Expect = 4.420e-109
Identity = 158/216 (73.15%), Postives = 183/216 (84.72%), Query Frame = 1
Query:   28 DFGVAIWGKDFSPQDHGDIKRRLERRGYEPTVDVFLPVCKEPAYLLANTWKHISALDYPDFSVFVLDDGDNEEVKALAEAFGFTYLVRPNRPSLKKAGNLRHAFTQTSGEVIAIFDADFCPRPDFLKETIPYFGHDASIGIVQTPQYFRYRKEQTWIEQGAGISQEYFYRLVQAILLLVNQDRFNAAVCVGSCGLYRRAALEPFGGMAAIGHSEDM 675
            DFG+A+WG+DF   +H ++ +  E +GY P+VDVFLPVCKEP YLLANTWK+++ALDYPDF VFVLDDG ++EVKALA  FGF Y++R N P LKKAGNLR+AF  TSGE IAIFDADFCPRP+FLKET+PYFG D +IGIVQTPQ+FR R EQTWIEQGAG+SQE+FYR+VQ     +NQDRFNAAVCVGSCGLYRR ALEP GGMAAI HSEDM
Sbjct:  694 DFGIAMWGRDFKLDEHAEVLKASEEKGYMPSVDVFLPVCKEPLYLLANTWKYVAALDYPDFKVFVLDDGASDEVKALASVFGFEYVLRSNAPELKKAGNLRNAFAMTSGEAIAIFDADFCPRPEFLKETVPYFGEDPTIGIVQTPQFFRVRDEQTWIEQGAGVSQEFFYRMVQ-----MNQDRFNAAVCVGSCGLYRRTALEPLGGMAAIEHSEDM 904          
BLAST of mRNA_H-elongata_contig109553.774.1 vs. uniprot
Match: A0A6H5K7X7_9PHAE (GT2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7X7_9PHAE)

HSP 1 Score: 330 bits (847), Expect = 3.980e-102
Identity = 163/254 (64.17%), Postives = 185/254 (72.83%), Query Frame = 1
Query:   31 FGVAIWGKDFSPQDHGDIKRRLERRGYEPTVDVFLPVCKEPAYLLANTWKHISALDYPDFSVFVLDDGDNEEVKALAEAFGF----------TYLV-----------------------------RPNRPSLKKAGNLRHAFTQTSGEVIAIFDADFCPRPDFLKETIPYFGHDASIGIVQTPQYFRYRKEQTWIEQGAGISQEYFYRLVQAILLLVNQDRFNAAVCVGSCGLYRRAALEPFGGMAAIGHSEDM 675
             GVAIWG+DF P+ H ++ R  E +GY P+VDVFLPVCKEP +LLANTW+H++ALDYPDF VFVLDDG ++EVKALA  FGF          TY V                             R + P+LKKAGNLR+AF +TSGE IAIFDADFCPR DFLKET+PYFG D +IGIVQTPQYFR+RKEQTWIEQGAG+SQE+FYR+VQ     VNQDRFNAAVCVGSCGLYRR ALEP GGMAAI HSEDM
Sbjct:  797 LGVAIWGRDFKPEVHAEVLRASEEKGYRPSVDVFLPVCKEPLHLLANTWQHVAALDYPDFKVFVLDDGASDEVKALASKFGFESRYVPSPIVTYFVLSRPPYRYCSMLLPDAATHCCRGIAEDVLREDAPALKKAGNLRNAFARTSGEAIAIFDADFCPRADFLKETVPYFGEDPTIGIVQTPQYFRHRKEQTWIEQGAGVSQEFFYRMVQ-----VNQDRFNAAVCVGSCGLYRRTALEPLGGMAAIEHSEDM 1045          
BLAST of mRNA_H-elongata_contig109553.774.1 vs. uniprot
Match: D7FQH7_ECTSI (Cellulose synthase (UDP-forming), family GT2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQH7_ECTSI)

HSP 1 Score: 313 bits (802), Expect = 8.790e-99
Identity = 149/215 (69.30%), Postives = 171/215 (79.53%), Query Frame = 1
Query:   31 FGVAIWGKDFSPQDHGDIKRRLERRGYEPTVDVFLPVCKEPAYLLANTWKHISALDYPDFSVFVLDDGDNEEVKALAEAFGFTYLVRPNRPSLKKAGNLRHAFTQTSGEVIAIFDADFCPRPDFLKETIPYFGHDASIGIVQTPQYFRYRKEQTWIEQGAGISQEYFYRLVQAILLLVNQDRFNAAVCVGSCGLYRRAALEPFGGMAAIGHSEDM 675
            FGV+IWG+DF P+ H  + R      + PTVDVFLPVC EPA LLANTW H+ A+DYP  +V VLDDG  +EVKALA  +GF Y+ R NRP LKKAGNLRHAF +TSGEVI IFDADFCPRPDFL+ET+PY   D SIGI+QTPQ+FR R+EQTW+EQGAG SQE+FYRL+Q     VN DRFNAAVCVGSCGLYRR A+EPFGG+A I HSEDM
Sbjct:  423 FGVSIWGRDFDPEIHACVVRHGLDVAFSPTVDVFLPVCNEPAVLLANTWNHVLAMDYPHVTVHVLDDGAKDEVKALAGEYGFQYIRRDNRPELKKAGNLRHAFARTSGEVIVIFDADFCPRPDFLRETLPYLV-DPSIGILQTPQFFRRREEQTWVEQGAGASQEHFYRLIQ-----VNLDRFNAAVCVGSCGLYRRTAVEPFGGVAPIEHSEDM 631          
BLAST of mRNA_H-elongata_contig109553.774.1 vs. uniprot
Match: D7FP53_ECTSI (Cellulose synthase (UDP-forming), family GT2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP53_ECTSI)

HSP 1 Score: 283 bits (724), Expect = 5.810e-85
Identity = 136/248 (54.84%), Postives = 173/248 (69.76%), Query Frame = 1
Query:   31 FGVAIWGKDFSPQDHGDIKRRLERRGYEPTVDVFLPVCKEPAYLLANTWKHISALDYPDFSVFVLDDGDNEEVKALAEAFGF---------------------------------TYLVRPNRPSLKKAGNLRHAFTQTSGEVIAIFDADFCPRPDFLKETIPYFGHDASIGIVQTPQYFRYRKEQTWIEQGAGISQEYFYRLVQAILLLVNQDRFNAAVCVGSCGLYRRAALEPFGGMAAIGHSEDM 675
            FGVA+WGKDF P+DH    R+ +   Y P+VD+FLPVC+EP +LL NTWK++ ALDYP+ +V VLDDG  EEV+ LAE  GF                                 T + R N P LKKAGNLR+AF +TSGEV+ IFDADFCPRP+FLKET PYF  D  + I+QTPQ+FRYR+EQTW+E+GAG++QE FYR+VQ     VN+++F+A++CVG+CG+YRR AL PFGG AAIG+SED+
Sbjct:  751 FGVAVWGKDFDPEDHAARIRKAQHEHYYPSVDIFLPVCREPTHLLDNTWKYVRALDYPNVTVHVLDDGAKEEVRQLAEMHGFQSSPFGATKAHREQPEWLAWWECERVALRRSRFTDIRRTNIPELKKAGNLRYAFARTSGEVLVIFDADFCPRPEFLKETTPYFK-DRDVAILQTPQFFRYREEQTWVEKGAGVTQELFYRMVQ-----VNRNKFDASICVGTCGVYRREALAPFGGTAAIGYSEDV 992          
BLAST of mRNA_H-elongata_contig109553.774.1 vs. uniprot
Match: A0A6H5KYP8_9PHAE (GT2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYP8_9PHAE)

HSP 1 Score: 274 bits (700), Expect = 4.310e-82
Identity = 133/239 (55.65%), Postives = 169/239 (70.71%), Query Frame = 1
Query:   31 FGVAIWGKDFSPQDHGDIKRRLERRGYEPTVDVFLPVCKEPAYLLANTWKHISALDYPDFSVFVLDDGDNEEVKA------------------LAEAFGFTY------LVRPNRPSLKKAGNLRHAFTQTSGEVIAIFDADFCPRPDFLKETIPYFGHDASIGIVQTPQYFRYRKEQTWIEQGAGISQEYFYRLVQAILLLVNQDRFNAAVCVGSCGLYRRAALEPFGGMAAIGHSEDM 675
            FGVA+WGKDF P+DH    R+ +   Y P+VD+FLPVC+EP +LL NTWK++ ALDYP+ +V VLDDG  EE +A                     A   T       + R N P LKKAGNLR+AF +TSGEV+ IFDADFCPRP+FLKET PYF  D  + I+QTPQ+FRYR+EQTW+E+GAG++QE FYR+VQ     VN+D+F+A++CVG+CG+YRR AL PFGG AAIG+SED+
Sbjct:  696 FGVAVWGKDFDPEDHAARLRKAQHEHYYPSVDIFLPVCREPTHLLDNTWKYVRALDYPNVTVHVLDDGAKEERRASERENTCDRAPIVSCKVQTMHASQNTLETETADIRRTNIPELKKAGNLRYAFARTSGEVLVIFDADFCPRPEFLKETTPYFK-DRDVAILQTPQFFRYREEQTWVEKGAGVTQELFYRMVQ-----VNRDKFDASICVGTCGVYRREALAPFGGTAAIGYSEDV 928          
BLAST of mRNA_H-elongata_contig109553.774.1 vs. uniprot
Match: A0A4Y7TTX0_9AGAR (Nucleotide-diphospho-sugar transferase n=1 Tax=Coprinellus micaceus TaxID=71717 RepID=A0A4Y7TTX0_9AGAR)

HSP 1 Score: 253 bits (647), Expect = 1.980e-78
Identity = 124/217 (57.14%), Postives = 153/217 (70.51%), Query Frame = 1
Query:   31 FGVAIWGKDFSPQDHGDIKRRLERRGYE--PTVDVFLPVCKEPAYLLANTWKHISALDYPDFSVFVLDDGDNEEVKALAEAFGFTYLVRPNRPSLKKAGNLRHAFTQTSGEVIAIFDADFCPRPDFLKETIPYFGHDASIGIVQTPQYFRYRKEQTWIEQGAGISQEYFYRLVQAILLLVNQDRFNAAVCVGSCGLYRRAALEPFGGMAAIGHSEDM 675
            + +   G+DF  + H  I      +  E  P+VDV+LP CKEP  +L NT++++S +DYP+  V+VLDDGD E V+ LA A+GF Y+ RPNR  LKKAGNLRHAFTQT+G+   IFDADFCPR D LKE IP   H+  I IVQTPQ+FR  +EQTW EQGA  +QE+FYR+VQ     VN+DRFNAA+CVGS  LYRR AL   GG A IGHSED+
Sbjct:   80 YFIGFCGRDFDLEGHKKIVEEHAIKDDEECPSVDVYLPCCKEPIEILENTYRYVSKIDYPNLKVWVLDDGDMESVRRLAAAYGFNYICRPNRGHLKKAGNLRHAFTQTNGDFFLIFDADFCPRADILKEMIPRVRHEPKIAIVQTPQFFRPCEEQTWSEQGASATQEFFYRIVQ-----VNRDRFNAAICVGSNALYRRQALVDVGGTAEIGHSEDV 291          
BLAST of mRNA_H-elongata_contig109553.774.1 vs. uniprot
Match: A0A8H6I364_9AGAR (Nucleotide-diphospho-sugar transferase n=1 Tax=Tulosesus angulatus TaxID=980116 RepID=A0A8H6I364_9AGAR)

HSP 1 Score: 247 bits (631), Expect = 4.510e-76
Identity = 122/217 (56.22%), Postives = 149/217 (68.66%), Query Frame = 1
Query:   31 FGVAIWGKDFSPQDHGDIKRRLERRGYEP--TVDVFLPVCKEPAYLLANTWKHISALDYPDFSVFVLDDGDNEEVKALAEAFGFTYLVRPNRPSLKKAGNLRHAFTQTSGEVIAIFDADFCPRPDFLKETIPYFGHDASIGIVQTPQYFRYRKEQTWIEQGAGISQEYFYRLVQAILLLVNQDRFNAAVCVGSCGLYRRAALEPFGGMAAIGHSEDM 675
            + V   GKDF    H  I      +  EP  +VDV+LP CKEP  +L NT+K+++ +DYP+  V+VLDDG  + VK LA A+GF Y+ R NRP LKKAGNLR+AFT+T G+   IFDADFCPR D LK+ IP   HD +I IVQTPQ+FR   EQTW EQGA  +QE+FYR+VQ     VN+DRF AA+CVGS  LYRR AL   GG A IGHSED+
Sbjct:   79 YFVGFCGKDFDIPGHKKIVEEYAVKDNEPCPSVDVYLPCCKEPIEILENTYKYVAKIDYPNLKVWVLDDGGMDSVKRLATAYGFNYICRDNRPELKKAGNLRYAFTRTEGDFFLIFDADFCPRADILKDMIPRMRHDPNIAIVQTPQFFRPCAEQTWCEQGASATQEFFYRIVQ-----VNRDRFGAAICVGSNALYRREALVDVGGTAEIGHSEDV 290          
BLAST of mRNA_H-elongata_contig109553.774.1 vs. uniprot
Match: A0A4Q2DZ04_9AGAR (Glyco_trans_2-like domain-containing protein n=1 Tax=Candolleomyces aberdarensis TaxID=2316362 RepID=A0A4Q2DZ04_9AGAR)

HSP 1 Score: 253 bits (646), Expect = 8.210e-76
Identity = 125/217 (57.60%), Postives = 152/217 (70.05%), Query Frame = 1
Query:   31 FGVAIWGKDFSPQDHGDIKRRLERRGYE--PTVDVFLPVCKEPAYLLANTWKHISALDYPDFSVFVLDDGDNEEVKALAEAFGFTYLVRPNRPSLKKAGNLRHAFTQTSGEVIAIFDADFCPRPDFLKETIPYFGHDASIGIVQTPQYFRYRKEQTWIEQGAGISQEYFYRLVQAILLLVNQDRFNAAVCVGSCGLYRRAALEPFGGMAAIGHSEDM 675
            + V   GKDF  + H  I      +  E  P+VDV+LP CKEP  +L NT+K++S +DYP+  V+VLDDG  + VK LA A+GF Y+ R NRP LKKAGNLR+AFT+T G+   IFDADFCPR D LK+ IP   HD +I IVQTPQ+FR  KEQTW EQGA  +QE+FYR+VQ     VN+DRF AA+CVGS  LYRRAAL   GG A IGHSED+
Sbjct:  363 YFVGFCGKDFDVKGHKKIVEEFAVKDNEECPSVDVYLPCCKEPIEILENTYKYVSKIDYPNLKVWVLDDGAMDSVKRLATAYGFNYICRDNRPHLKKAGNLRYAFTRTEGDFFLIFDADFCPRADILKDMIPRVRHDPNIAIVQTPQFFRPCKEQTWTEQGASATQEFFYRIVQ-----VNRDRFGAAICVGSNALYRRAALVDVGGTAEIGHSEDV 574          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig109553.774.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G9A1_ECTSI1.200e-11170.22Cellulose synthase (UDP-forming), family GT2 n=1 T... [more]
D7G9A2_ECTSI7.210e-11174.88Cellulose synthase (UDP-forming), family GT2 n=1 T... [more]
D7G9A6_ECTSI4.420e-10973.15Cellulose synthase (UDP-forming), family GT2 n=2 T... [more]
A0A6H5K7X7_9PHAE3.980e-10264.17GT2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D7FQH7_ECTSI8.790e-9969.30Cellulose synthase (UDP-forming), family GT2 n=2 T... [more]
D7FP53_ECTSI5.810e-8554.84Cellulose synthase (UDP-forming), family GT2 n=1 T... [more]
A0A6H5KYP8_9PHAE4.310e-8255.65GT2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A4Y7TTX0_9AGAR1.980e-7857.14Nucleotide-diphospho-sugar transferase n=1 Tax=Cop... [more]
A0A8H6I364_9AGAR4.510e-7656.22Nucleotide-diphospho-sugar transferase n=1 Tax=Tul... [more]
A0A4Q2DZ04_9AGAR8.210e-7657.60Glyco_trans_2-like domain-containing protein n=1 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig109553contigH-elongata_contig109553:508..2190 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score352.1
Seed ortholog evalue2e-94
Seed eggNOG ortholog2880.D7G9A2
EggNOG free text desc.Glycosyl transferase family 21
EggNOG OGs2C0MJ@1,2S2MV@2759
COG Functional cat.M
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionCellulose synthase (UDP-forming), family GT2
Ec32 orthologEc-03_004230.1
Exons3
Model size675
Cds size675
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig109553.774.1prot_H-elongata_contig109553.774.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig109553 508..2190 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929622.5258706-CDS-H-elongata_contig109553:507..7871622929622.5258706-CDS-H-elongata_contig109553:507..787Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig109553 508..787 +
1691679095.2974985-CDS-H-elongata_contig109553:507..7871691679095.2974985-CDS-H-elongata_contig109553:507..787Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig109553 508..787 +
1622929622.5367265-CDS-H-elongata_contig109553:1350..16311622929622.5367265-CDS-H-elongata_contig109553:1350..1631Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig109553 1351..1631 +
1691679095.3093069-CDS-H-elongata_contig109553:1350..16311691679095.3093069-CDS-H-elongata_contig109553:1350..1631Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig109553 1351..1631 +
1622929622.5481324-CDS-H-elongata_contig109553:2076..21901622929622.5481324-CDS-H-elongata_contig109553:2076..2190Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig109553 2077..2190 +
1691679095.3173842-CDS-H-elongata_contig109553:2076..21901691679095.3173842-CDS-H-elongata_contig109553:2076..2190Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig109553 2077..2190 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig109553.774.1

>prot_H-elongata_contig109553.774.1 ID=prot_H-elongata_contig109553.774.1|Name=mRNA_H-elongata_contig109553.774.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=225bp
AARVARDAPDFGVAIWGKDFSPQDHGDIKRRLERRGYEPTVDVFLPVCKE
PAYLLANTWKHISALDYPDFSVFVLDDGDNEEVKALAEAFGFTYLVRPNR
PSLKKAGNLRHAFTQTSGEVIAIFDADFCPRPDFLKETIPYFGHDASIGI
VQTPQYFRYRKEQTWIEQGAGISQEYFYRLVQAILLLVNQDRFNAAVCVG
SCGLYRRAALEPFGGMAAIGHSEDM
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mRNA from alignment at H-elongata_contig109553:508..2190+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig109553.774.1 ID=mRNA_H-elongata_contig109553.774.1|Name=mRNA_H-elongata_contig109553.774.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1683bp|location=Sequence derived from alignment at H-elongata_contig109553:508..2190+ (Himanthalia elongata Himel1 dioecious)
GCTGCCCGCGTTGCTCGTGACGCGCCAGACTTCGGCGTTGCAATTTGGGG GAAGGACTTCTCCCCCCAAGACCATGGAGATATAAAACGACGGTTGGAGC GGCGGGGCTATGAGCCCACCGTGGATGTGTTCCTGCCCGTCTGCAAAGAG CCCGCTTACTTGCTGGCCAACACCTGGAAGCATATATCTGCTCTAGACTA CCCTGATTTTAGCGTCTTTGTCTTAGACGACGGAGATAATGAGGAAGTGA AGGCTCTCGCCGAGGCATTCGGCTTCACATGTGAGTTTGGAGTGCTTGAC GACGGTGCGGTCGAACTCATTCATCATCAAAACGGAAATATAAAATTTAT CATTTCGTGTCGAAGACCTCAAAGATTGCTTGGCCGTTTAGAGATGGATA CTGGAGCTTGAGCGCTTTTTCTTCTTCAAATTGTTTGAATAATACTCTTG CGTATTACTTTGTTTGCTTATATTATTGCCCCGCCGCTTCGCCCATGTCA TCTCTAAAGCTAAAATTGCATGATGTTGTAGTCGCTAACCATTCATTATT GCTTGACATGTACAAGTAGTGCCGAGCATGCATCATAGTGCGATTTTCAA ACAAAACTATATATATATAGTATATAGAAGCACTTGCTAGGCTCTCTCCG ACCCTGCAACAGCTGGAATGAGCAAATAGTCACACCTAGCCGATTGATTG ACACTTAGAAGAAAGTAAGAATAAAGAGATGCACAAAACGTCGTACCCGT ACGCGCGCTGAAACAGCGACGAAAATGACACAGGAAAAACACTAACAACT GCGTCTGGACCTGAAAACCTTCCTTCTCCCATCCTTGAAACAGACCTGGT GAGGCCGAACCGGCCTTCGCTGAAGAAGGCGGGGAACCTTCGACACGCCT TCACTCAGACGTCGGGCGAAGTCATCGCTATTTTCGACGCGGATTTTTGT CCCCGGCCGGATTTCCTCAAAGAAACAATTCCGTACTTTGGCCATGACGC CTCCATCGGCATCGTACAAACCCCACAGTACTTCCGGTACCGCAAGGAAC AAACCTGGATCGAGCAAGGCGCCGGAATATCCCAAGAGTACTTCTATCGC CTAGTACAGGCAATATTATTACTGGTTACAACAAATGGTTGGTTGGGAAG AGGGGGGGGGGCGAGGTTAAATCAGCCCCTTTCTAGCTCGGGTTTGAAAT ATCCGCTTGATGAGATAAGCTGCATTCAAAGAAAGTCGTCAGTATATCCA TGTAGCAAGAAATTGGCTAACGTTATATATTCGAAAAGGGCTGTTTTGAA CTCCGTTATCTATTTCATTTGGATACAAGTTGCCTATCCTCAACATGCAT AGTATGATCTATCGTAGAAGAAGAAGACGTGGTGTAGCCTTCAACTCTAT CTATACATTGTTCGCCAATCAGTTTCACTAGTATTTAGCTATCCCCGCTG CAGCCATGCTGCATTGGTTATTGAAGATTCATTAAAAAAAGTGTAAGGGT GGATCAAGTCACGCCCAAATCGTTATAACGACATTATTATATCTTTGCTT ACTACCCGGGCACGGGCAGGTGAACCAAGACAGGTTCAACGCCGCGGTGT GCGTTGGCTCGTGCGGGCTATACCGTCGAGCGGCGCTAGAGCCCTTCGGT GGCATGGCGGCCATCGGCCACTCGGAGGACATG
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Coding sequence (CDS) from alignment at H-elongata_contig109553:508..2190+

>mRNA_H-elongata_contig109553.774.1 ID=mRNA_H-elongata_contig109553.774.1|Name=mRNA_H-elongata_contig109553.774.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1350bp|location=Sequence derived from alignment at H-elongata_contig109553:508..2190+ (Himanthalia elongata Himel1 dioecious)
GCTGCCCGCGTTGCTCGTGACGCGCCAGACTTCGGCGTTGCAATTTGGGG
GAAGGACTTCTCCCCCCAAGACCATGGAGATATAAAACGACGGTTGGAGC
GGCGGGGCTATGAGCCCACCGTGGATGTGTTCCTGCCCGTCTGCAAAGAG
CCCGCTTACTTGCTGGCCAACACCTGGAAGCATATATCTGCTCTAGACTA
CCCTGATTTTAGCGTCTTTGTCTTAGACGACGGAGATAATGAGGAAGTGA
AGGCTCTCGCCGAGGCATTCGGCTTCACATGCTGCCCGCGTTGCTCGTGA
CGCGCCAGACTTCGGCGTTGCAATTTGGGGGAAGGACTTCTCCCCCCAAG
ACCATGGAGATATAAAACGACGGTTGGAGCGGCGGGGCTATGAGCCCACC
GTGGATGTGTTCCTGCCCGTCTGCAAAGAGCCCGCTTACTTGCTGGCCAA
CACCTGGAAGCATATATCTGCTCTAGACTACCCTGATTTTAGCGTCTTTG
TCTTAGACGACGGAGATAATGAGGAAGTGAAGGCTCTCGCCGAGGCATTC
GGCTTCACATACCTGGTGAGGCCGAACCGGCCTTCGCTGAAGAAGGCGGG
GAACCTTCGACACGCCTTCACTCAGACGTCGGGCGAAGTCATCGCTATTT
TCGACGCGGATTTTTGTCCCCGGCCGGATTTCCTCAAAGAAACAATTCCG
TACTTTGGCCATGACGCCTCCATCGGCATCGTACAAACCCCACAGTACTT
CCGGTACCGCAAGGAACAAACCTGGATCGAGCAAGGCGCCGGAATATCCC
AAGAGTACTTCTATCGCCTAGTACAGGCAATATTATTACTGACCTGGTGA
GGCCGAACCGGCCTTCGCTGAAGAAGGCGGGGAACCTTCGACACGCCTTC
ACTCAGACGTCGGGCGAAGTCATCGCTATTTTCGACGCGGATTTTTGTCC
CCGGCCGGATTTCCTCAAAGAAACAATTCCGTACTTTGGCCATGACGCCT
CCATCGGCATCGTACAAACCCCACAGTACTTCCGGTACCGCAAGGAACAA
ACCTGGATCGAGCAAGGCGCCGGAATATCCCAAGAGTACTTCTATCGCCT
AGTACAGGCAATATTATTACTGGTGAACCAAGACAGGTTCAACGCCGCGG
TGTGCGTTGGCTCGTGCGGGCTATACCGTCGAGCGGCGCTAGAGCCCTTC
GGTGGCATGGCGGCCATCGGCCACTCGGAGGACATGGTGAACCAAGACAG
GTTCAACGCCGCGGTGTGCGTTGGCTCGTGCGGGCTATACCGTCGAGCGG
CGCTAGAGCCCTTCGGTGGCATGGCGGCCATCGGCCACTCGGAGGACATG
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