mRNA_H-elongata_contig109502.771.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig109502.771.1
Unique NamemRNA_H-elongata_contig109502.771.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig109502.771.1 vs. uniprot
Match: D7FS01_ECTSI (Beta-galactosidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS01_ECTSI)

HSP 1 Score: 268 bits (684), Expect = 1.160e-79
Identity = 135/214 (63.08%), Postives = 153/214 (71.50%), Query Frame = 1
Query:    1 RANVELPVASENVLNLDGAWRFALHPSPEKAIDSAFFRKGFHEEAFAAGGG----------------DTKGVRGADGSWKDTPVPSCWQLQGYDVPIYTNFRYPFPVTPPEVPATNPTGCYRLAFSVPEAW-------VRPDAISEQRKIVLHFAGVDGAFFAWVNGRLAGFSKDSRLPAEFDVTDKINIESPSENVLSVMVLRWSDASYLEDQ 573
            RAN ELP AS NVL+LDG WRFALH  PE A+ S FF + F E   AA GG                 + GVRGADG W+DTPVPSCWQ+QGYDVPIYTN +YPFPV PP VPA NPTGCYRL FS+P+AW              EQR+++LHFAGVD AFFAWVNG L GFSKDSRLPAEF+VT+++   S ++NVLSVMVLRWSDASYLEDQ
Sbjct:  127 RANPELPEASNNVLSLDGTWRFALHSCPEHALASRFFSRKFRE---AAAGGLLERGGSGVXXXXXXXXSGGVRGADGRWRDTPVPSCWQMQGYDVPIYTNIQYPFPVNPPTVPADNPTGCYRLEFSLPDAWGTSGXXXXXXRTAVEQRRVILHFAGVDSAFFAWVNGHLVGFSKDSRLPAEFEVTERVLYGSSAKNVLSVMVLRWSDASYLEDQ 337          
BLAST of mRNA_H-elongata_contig109502.771.1 vs. uniprot
Match: A0A6H5KER6_9PHAE (GH2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KER6_9PHAE)

HSP 1 Score: 240 bits (613), Expect = 4.570e-76
Identity = 127/214 (59.35%), Postives = 146/214 (68.22%), Query Frame = 1
Query:    1 RANVELPVASENVLNLDGAWRFALHPSPEKAIDSAFFRKGFHEEAFAAGGGDTKG---------------VRGADGSWKDTPVPSCWQLQGYDVPIYTNFRYPFPVTPPEVPATNPTGCYRLAFSVPEAW--------VRPDAISEQRKIVLHFAGVDGAFFAWVNGRLAGFSKDSRLPAEFDVTDKINIESPSENVLSVMVLRWSDASYLEDQ 573
            RAN ELP AS+NVL+LDG WRFALH  PE A+ S FF + F E A  AGG   +G               VRGADG W+DTP        GYDVPIYTN +YPFPV PP VP+ NPTGCYRL FS+P+AW               EQR+++LHFAGVD AFFAWVNG L GFSKDSRLPAEF+VT+++   S ++NVLSVMVLRWSDASYLEDQ
Sbjct:  127 RANTELPEASKNVLSLDGTWRFALHSCPEHALASRFFSRNFREAA--AGGLLERGGSGVSXXXXXXXSGDVRGADGRWRDTP--------GYDVPIYTNIQYPFPVNPPTVPSDNPTGCYRLEFSLPDAWGTSGXXXXXXXXTAVEQRRVILHFAGVDSAFFAWVNGHLVGFSKDSRLPAEFEVTERVLYGSSAKNVLSVMVLRWSDASYLEDQ 330          
BLAST of mRNA_H-elongata_contig109502.771.1 vs. uniprot
Match: S8CWP1_9LAMI (Uncharacterized protein n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8CWP1_9LAMI)

HSP 1 Score: 177 bits (449), Expect = 3.050e-49
Identity = 90/180 (50.00%), Postives = 111/180 (61.67%), Query Frame = 1
Query:   37 VLNLDGAWRFALHPSPEKAIDSAFFRKGFHEEAFAAGGGDTKGVRGADGSWKDTPVPSCWQLQGYDVPIYTNFRYPFPVTPPEVPATNPTGCYRLAFSVPEAWVRPDAISEQRKIVLHFAGVDGAFFAWVNGRLAGFSKDSRLPAEFDVTDKIN-IESPSENVLSVMVLRWSDASYLEDQ 573
            V +L G+W+F L  SP+  + S F+   F                  D SW   PVPS WQ+ G+D PIYTN  YPFP+ PP VP  NPTGCYR  FS+P  W       E R+I LHF GVD AFFAW+NG   G+S+DSRLPAEF++T+  + +ES   N LSV+V+RWSD SYLEDQ
Sbjct:   87 VKSLSGSWKFFLGSSPDD-VPSKFYEISFD-----------------DSSWHSLPVPSNWQMHGFDKPIYTNVVYPFPLDPPNVPEDNPTGCYRTYFSIPSKW-------EGRRIFLHFEGVDSAFFAWINGHPVGYSQDSRLPAEFEITEFCHALESGQRNCLSVIVMRWSDGSYLEDQ 241          
BLAST of mRNA_H-elongata_contig109502.771.1 vs. uniprot
Match: A0A0K9PM40_ZOSMR (Glyco_hydro_2_N domain-containing protein n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9PM40_ZOSMR)

HSP 1 Score: 169 bits (429), Expect = 5.490e-49
Identity = 86/180 (47.78%), Postives = 110/180 (61.11%), Query Frame = 1
Query:   37 VLNLDGAWRFALHPSPEKAIDSAFFRKGFHEEAFAAGGGDTKGVRGADGSWKDTPVPSCWQLQGYDVPIYTNFRYPFPVTPPEVPATNPTGCYRLAFSVPEAWVRPDAISEQRKIVLHFAGVDGAFFAWVNGRLAGFSKDSRLPAEFDVTDKIN-IESPSENVLSVMVLRWSDASYLEDQ 573
            V +L G W+F L  +P+           FH   F             D SW   PVPS WQ+ G+D PIYTN  YPFP+ PP VP+ NPTGCYR  F +P+ W       + R+I+LHF GVD AFFAW+NG L G+S+DSRLPAEF++T   +  +S  EN+L+V V+RWS+ SYLEDQ
Sbjct:   85 VKSLSGYWKFHLASNPDAVPHE------FHGTCFD------------DSSWDALPVPSNWQMHGFDTPIYTNIVYPFPLNPPYVPSENPTGCYRKNFHIPKEW-------KDRRILLHFEGVDSAFFAWLNGILVGYSEDSRLPAEFEITKWCHPFDSNMENILAVQVMRWSNGSYLEDQ 239          
BLAST of mRNA_H-elongata_contig109502.771.1 vs. uniprot
Match: A0A6P6FZK7_ZIZJJ (LOW QUALITY PROTEIN: uncharacterized protein LOC107412906 n=1 Tax=Ziziphus jujuba TaxID=326968 RepID=A0A6P6FZK7_ZIZJJ)

HSP 1 Score: 179 bits (454), Expect = 6.280e-49
Identity = 92/180 (51.11%), Postives = 112/180 (62.22%), Query Frame = 1
Query:   37 VLNLDGAWRFALHPSPEKAIDSAFFRKGFHEEAFAAGGGDTKGVRGADGSWKDTPVPSCWQLQGYDVPIYTNFRYPFPVTPPEVPATNPTGCYRLAFSVPEAWVRPDAISEQRKIVLHFAGVDGAFFAWVNGRLAGFSKDSRLPAEFDVTDKIN-IESPSENVLSVMVLRWSDASYLEDQ 573
            V +L G WRF L  SP K  ++      FH+ AF             D  WK  PVPS WQ+ G+D PIYTNF YPFP  PP VP  NPTGCYR  F +PE W       + R+I+LHF  VD AFFAW+NG   G+S+DSRLPAEF++TD  + I S ++NVL+V V +WSD SYLEDQ
Sbjct:   89 VKSLSGYWRFFLASSPSKVPEN------FHDSAFH------------DSEWKTLPVPSNWQMHGFDHPIYTNFTYPFPFDPPFVPKENPTGCYRTYFKIPEEW-------KGRRILLHFQAVDSAFFAWINGVPVGYSQDSRLPAEFEITDYCHPIGSGNKNVLAVQVFKWSDGSYLEDQ 243          
BLAST of mRNA_H-elongata_contig109502.771.1 vs. uniprot
Match: A0A835ZBT9_9STRA (Beta-galactosidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBT9_9STRA)

HSP 1 Score: 180 bits (456), Expect = 6.340e-49
Identity = 94/192 (48.96%), Postives = 115/192 (59.90%), Query Frame = 1
Query:    7 NVELPVASENVLNLDGAWRFALHPSPEKAIDSAFFRKGFHEEAFAAGGGDTKGVRGADGSWKDTPVPSCWQLQ---GYDVPIYTNFRYPFPVTPPEVPATNPTGCYRLAFSVPEAWVRPDAISEQRKIVLHFAGVDGAFFAWVNGRLAGFSKDSRLPAEFDVTDKINIESPSENVLSVMVLRWSDASYLEDQ 573
            +V  P AS    +LDG W F L  SPE+A+ + F+R+  H  A                 W+   VP CWQLQ   G D PIYTN +YP PVTPP VP  NPTGCY     V + W         R+IVLHF GVD AF+ WVNG+L GFSKDSRLPAEFDVT+ +N  +   N ++VMV+RWSD ++LEDQ
Sbjct:   44 HVGAPEASPYTQSLDGDWNFKLFGSPEEALTTQFWRQSDHSPAE---------------QWRPLAVPGCWQLQLEPGADPPIYTNIQYPIPVTPPRVPERNPTGCYVRTVEVAQGWAG-------RRIVLHFGGVDSAFYVWVNGQLQGFSKDSRLPAEFDVTEALN--TTGANTVAVMVVRWSDGAFLEDQ 211          
BLAST of mRNA_H-elongata_contig109502.771.1 vs. uniprot
Match: UPI001E8A8329 (Uncharacterized protein n=1 Tax=Ziziphus jujuba var. spinosa TaxID=714518 RepID=UPI001E8A8329)

HSP 1 Score: 178 bits (452), Expect = 7.410e-49
Identity = 91/178 (51.12%), Postives = 111/178 (62.36%), Query Frame = 1
Query:   43 NLDGAWRFALHPSPEKAIDSAFFRKGFHEEAFAAGGGDTKGVRGADGSWKDTPVPSCWQLQGYDVPIYTNFRYPFPVTPPEVPATNPTGCYRLAFSVPEAWVRPDAISEQRKIVLHFAGVDGAFFAWVNGRLAGFSKDSRLPAEFDVTDKIN-IESPSENVLSVMVLRWSDASYLEDQ 573
            +L G WRF L  SP K  ++      FH+ AF             D  WK  PVPS WQ+ G+D PIYTNF YPFP  PP VP  NPTGCYR  F +PE W       + R+I+LHF  VD AFFAW+NG   G+S+DSRLPAEF++TD  + I S ++NVL+V V +WSD SYLEDQ
Sbjct:   20 SLSGYWRFFLASSPSKVPEN------FHDSAFH------------DSEWKTLPVPSNWQMHGFDHPIYTNFTYPFPFDPPFVPKENPTGCYRTYFQIPEEW-------KGRRILLHFQAVDSAFFAWINGVPVGYSQDSRLPAEFEITDYCHPIGSGNKNVLAVQVFKWSDGSYLEDQ 172          
BLAST of mRNA_H-elongata_contig109502.771.1 vs. uniprot
Match: A0A453GP06_AEGTS (Uncharacterized protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453GP06_AEGTS)

HSP 1 Score: 171 bits (434), Expect = 1.020e-48
Identity = 87/178 (48.88%), Postives = 110/178 (61.80%), Query Frame = 1
Query:   43 NLDGAWRFALHPSPEKAIDSAFFRKGFHEEAFAAGGGDTKGVRGADGSWKDTPVPSCWQLQGYDVPIYTNFRYPFPVTPPEVPATNPTGCYRLAFSVPEAWVRPDAISEQRKIVLHFAGVDGAFFAWVNGRLAGFSKDSRLPAEFDVTDKIN-IESPSENVLSVMVLRWSDASYLEDQ 573
            +L G W+F L  SPE   D       F++  F             D  W+  PVPS WQ+ G+D PIYTN  YPFP+ PP VP+ NPTGCYR+ F +P+ W       + R+I+LHF  VD AF AWVNG   G+S+DSRLPAEF++TD  +  +S  ENVL+V V+RWSD SYLEDQ
Sbjct:   94 SLSGHWKFRLAQSPETVPDK------FYDAQFN------------DSDWEALPVPSNWQMHGFDRPIYTNVTYPFPMNPPFVPSENPTGCYRMVFHIPKEW-------KGRRILLHFEAVDSAFLAWVNGVPIGYSQDSRLPAEFEITDCCHHCDSDKENVLAVQVMRWSDGSYLEDQ 246          
BLAST of mRNA_H-elongata_contig109502.771.1 vs. uniprot
Match: A0A1D6N0Y0_MAIZE (Glycoside hydrolase family 2 protein n=3 Tax=Zea mays TaxID=4577 RepID=A0A1D6N0Y0_MAIZE)

HSP 1 Score: 176 bits (447), Expect = 2.720e-48
Identity = 90/178 (50.56%), Postives = 111/178 (62.36%), Query Frame = 1
Query:   43 NLDGAWRFALHPSPEKAIDSAFFRKGFHEEAFAAGGGDTKGVRGADGSWKDTPVPSCWQLQGYDVPIYTNFRYPFPVTPPEVPATNPTGCYRLAFSVPEAWVRPDAISEQRKIVLHFAGVDGAFFAWVNGRLAGFSKDSRLPAEFDVTDKIN-IESPSENVLSVMVLRWSDASYLEDQ 573
            +L G W+F L PS E +I   F+   F                  D +W   PVPS WQ+ G+D PIYTN  YPFP+ PP VPA NPTGCYR  F +P+ W       + R+I+LHF  VD AFFAWVNG L G+S+DSRLPAEF++TD  +  +S  ENVL+V V+RWSD SYLEDQ
Sbjct:   90 SLSGYWKFLLSPSAE-SIPERFYYAHFD-----------------DSNWSGLPVPSNWQMHGFDRPIYTNVTYPFPLNPPFVPADNPTGCYRTVFHIPKEW-------KGRRILLHFEAVDSAFFAWVNGVLVGYSQDSRLPAEFEITDCCHPCDSDKENVLAVQVMRWSDGSYLEDQ 242          
BLAST of mRNA_H-elongata_contig109502.771.1 vs. uniprot
Match: A0A6P3ZLS4_ZIZJJ (uncharacterized protein LOC107412905 n=1 Tax=Ziziphus jujuba TaxID=326968 RepID=A0A6P3ZLS4_ZIZJJ)

HSP 1 Score: 173 bits (438), Expect = 5.970e-48
Identity = 90/180 (50.00%), Postives = 110/180 (61.11%), Query Frame = 1
Query:   37 VLNLDGAWRFALHPSPEKAIDSAFFRKGFHEEAFAAGGGDTKGVRGADGSWKDTPVPSCWQLQGYDVPIYTNFRYPFPVTPPEVPATNPTGCYRLAFSVPEAWVRPDAISEQRKIVLHFAGVDGAFFAWVNGRLAGFSKDSRLPAEFDVTDKIN-IESPSENVLSVMVLRWSDASYLEDQ 573
            V +L G WRF L  SP K  ++      FH+ AF             D  WK  PVPS WQ+ G+D PIYTN  YPFP  PP V   NPTGCYR  F +PE W       + R+I+LHF  VD AFFAW+NG   G+S+DSRLPAEF++TD  + I S ++NVL+V V +WSD SYLEDQ
Sbjct:  121 VKSLSGYWRFFLASSPSKVPEN------FHDSAFH------------DSEWKTLPVPSNWQMHGFDHPIYTNTTYPFPFDPPFVSKENPTGCYRTYFQIPEEW-------KGRRILLHFQAVDSAFFAWINGVPVGYSQDSRLPAEFEITDYCHPIGSGTKNVLAVQVFKWSDGSYLEDQ 275          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig109502.771.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FS01_ECTSI1.160e-7963.08Beta-galactosidase n=1 Tax=Ectocarpus siliculosus ... [more]
A0A6H5KER6_9PHAE4.570e-7659.35GH2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
S8CWP1_9LAMI3.050e-4950.00Uncharacterized protein n=1 Tax=Genlisea aurea Tax... [more]
A0A0K9PM40_ZOSMR5.490e-4947.78Glyco_hydro_2_N domain-containing protein n=1 Tax=... [more]
A0A6P6FZK7_ZIZJJ6.280e-4951.11LOW QUALITY PROTEIN: uncharacterized protein LOC10... [more]
A0A835ZBT9_9STRA6.340e-4948.96Beta-galactosidase n=1 Tax=Tribonema minus TaxID=3... [more]
UPI001E8A83297.410e-4951.12Uncharacterized protein n=1 Tax=Ziziphus jujuba va... [more]
A0A453GP06_AEGTS1.020e-4848.88Uncharacterized protein n=1 Tax=Aegilops tauschii ... [more]
A0A1D6N0Y0_MAIZE2.720e-4850.56Glycoside hydrolase family 2 protein n=3 Tax=Zea m... [more]
A0A6P3ZLS4_ZIZJJ5.970e-4850.00uncharacterized protein LOC107412905 n=1 Tax=Zizip... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig109502contigH-elongata_contig109502:510..2082 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score267.7
Seed ortholog evalue4.2e-69
Seed eggNOG ortholog2880.D7FS01
KEGG rclassRC00049,RC00452
KEGG koko:K01190
KEGG ReactionR01105,R01678,R03355,R04783,R06114
KEGG Pathwayko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100
EggNOG free text desc.beta-glucuronidase activity
EggNOG OGsCOG3250@1,KOG2024@2759
EC3.2.1.23
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Hectar predicted targeting categoryother localisation
Exons3
Model size573
Cds size573
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig109502.771.1prot_H-elongata_contig109502.771.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig109502 510..2082 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929622.2356846-CDS-H-elongata_contig109502:509..7341622929622.2356846-CDS-H-elongata_contig109502:509..734Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig109502 510..734 +
1691679095.151377-CDS-H-elongata_contig109502:509..7341691679095.151377-CDS-H-elongata_contig109502:509..734Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig109502 510..734 +
1622929622.251634-CDS-H-elongata_contig109502:1073..12861622929622.251634-CDS-H-elongata_contig109502:1073..1286Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig109502 1074..1286 +
1691679095.1632857-CDS-H-elongata_contig109502:1073..12861691679095.1632857-CDS-H-elongata_contig109502:1073..1286Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig109502 1074..1286 +
1622929622.2703664-CDS-H-elongata_contig109502:1947..20821622929622.2703664-CDS-H-elongata_contig109502:1947..2082Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig109502 1948..2082 +
1691679095.174144-CDS-H-elongata_contig109502:1947..20821691679095.174144-CDS-H-elongata_contig109502:1947..2082Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig109502 1948..2082 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig109502.771.1

>prot_H-elongata_contig109502.771.1 ID=prot_H-elongata_contig109502.771.1|Name=mRNA_H-elongata_contig109502.771.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=191bp
RANVELPVASENVLNLDGAWRFALHPSPEKAIDSAFFRKGFHEEAFAAGG
GDTKGVRGADGSWKDTPVPSCWQLQGYDVPIYTNFRYPFPVTPPEVPATN
PTGCYRLAFSVPEAWVRPDAISEQRKIVLHFAGVDGAFFAWVNGRLAGFS
KDSRLPAEFDVTDKINIESPSENVLSVMVLRWSDASYLEDQ
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mRNA from alignment at H-elongata_contig109502:510..2082+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig109502.771.1 ID=mRNA_H-elongata_contig109502.771.1|Name=mRNA_H-elongata_contig109502.771.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1573bp|location=Sequence derived from alignment at H-elongata_contig109502:510..2082+ (Himanthalia elongata Himel1 dioecious)
AGGGCGAACGTCGAACTCCCGGTAGCGTCCGAAAACGTACTCAATCTCGA CGGCGCGTGGAGATTCGCTCTTCACCCTTCCCCTGAAAAAGCAATCGACT CGGCATTTTTCCGGAAGGGTTTCCATGAGGAGGCTTTCGCCGCGGGGGGT GGAGATACGAAAGGCGTGCGGGGCGCGGACGGAAGTTGGAAGGACACACC CGTTCCGAGCTGCTGGCAACTACAGGTGCAGTATTATTTGGTTTGTATTT ACCGGCATACCCCCTCTACCGTCACGCTGTAACGCACTGTCTGTAACTTG AGATGGAGAGAAATGGGGAGGGGCCTGGGCACACCCATCCTTTGCTACTA CCGTGATGTCGCCCTTGACTAACGTGGCTGCGACGGCATAGCATGTGAAC ACGCGTTCCGAAAATACATATCCATTCATTTTGCTAATATCTTATCGTAT TTCCCCCAACCTCCTCCCTCCCCTTTTTTGTGGGGGGAACGCCTCCGCTC CTGATGAAAAACCCGAATAATTGCCTCTCTGTCAATCTCTTTCTCTCTCA TGTGTGTGGAAAAGGGCTACGATGTGCCCATCTACACGAACTTCCGGTAC CCCTTTCCGGTCACGCCTCCGGAGGTACCCGCCACGAACCCCACCGGGTG TTACCGTCTCGCTTTCTCCGTCCCCGAGGCCTGGGTTCGGCCCGACGCGA TCTCGGAGCAAAGGAAGATCGTTTTACACTTCGCGGGGGTGGACGGTGCC TTTTTTGCGTGGGTGAATGGTCGCCTGGTGAGATACAACAAGAGTAACAA AAGGGTAAATATGTAATTTCCGAGGAATTCCAGGGAGCGAGACGAAATTG AGAGGGGGTGGAGATAGGGGTATACTGTTACCTTTAAAAAAAACGCCACC AAGAAAGGGGCCACGATCTTCGCCGCTTCCAGTGATCGCAATGCTGATAC TGCTGACGGAGATTGTGCTCTGAGAAATCATGGCTTAAGTGGGCGATGGG GAGGCAGAGGGCGGCTTTAAGCGTGTTTCGATCTCTGCTTTGCCCGGCAG CATGGGGGGGGGGTAGATATGCATACCGTACTGCATACCACCGCAAAGCG TGGAGACCACGGTAGCCCGGGGAAAGGCGAGGCTCGGAGGGAAAACCACC GCGACCAGCGCCGGCGCGCACCCGCCTCCGTTTCTCGGCGGCCTTGTTGG GGTTAGGAAAACTTTGCAAGTGGCCGCAGCAGTGTCACAGCAAAATCTTT TAAATATAAATGTTGTATGTTTCGTGCATTTTTCGGCGGGGTTTGTTGAA GTTTGCTTCATTCTTTCGATCACAAAAAAATATCTCTCTATCTCTATATA TAGGGAGAGAGAGAAAGATACATGACTCCTTGTCGGTAAATTTTGATTTT AAACCAAAACAAACAAACCCGAAAAAAAAACCCATCAGGCTGGATTTTCT AAGGACAGTCGCCTGCCGGCGGAGTTTGACGTCACCGACAAGATCAATAT CGAGTCGCCGTCGGAGAACGTGCTATCGGTGATGGTGCTTCGCTGGAGCG ACGCTTCCTACCTAGAAGATCAG
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Coding sequence (CDS) from alignment at H-elongata_contig109502:510..2082+

>mRNA_H-elongata_contig109502.771.1 ID=mRNA_H-elongata_contig109502.771.1|Name=mRNA_H-elongata_contig109502.771.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1146bp|location=Sequence derived from alignment at H-elongata_contig109502:510..2082+ (Himanthalia elongata Himel1 dioecious)
AGGGCGAACGTCGAACTCCCGGTAGCGTCCGAAAACGTACTCAATCTCGA
CGGCGCGTGGAGATTCGCTCTTCACCCTTCCCCTGAAAAAGCAATCGACT
CGGCATTTTTCCGGAAGGGTTTCCATGAGGAGGCTTTCGCCGCGGGGGGT
GGAGATACGAAAGGCGTGCGGGGCGCGGACGGAAGTTGGAAGGACACACC
CGTTCCGAGCTGCTGGCAACTACAGAGGGCGAACGTCGAACTCCCGGTAG
CGTCCGAAAACGTACTCAATCTCGACGGCGCGTGGAGATTCGCTCTTCAC
CCTTCCCCTGAAAAAGCAATCGACTCGGCATTTTTCCGGAAGGGTTTCCA
TGAGGAGGCTTTCGCCGCGGGGGGTGGAGATACGAAAGGCGTGCGGGGCG
CGGACGGAAGTTGGAAGGACACACCCGTTCCGAGCTGCTGGCAACTACAG
GGCTACGATGTGCCCATCTACACGAACTTCCGGTACCCCTTTCCGGTCAC
GCCTCCGGAGGTACCCGCCACGAACCCCACCGGGTGTTACCGTCTCGCTT
TCTCCGTCCCCGAGGCCTGGGTTCGGCCCGACGCGATCTCGGAGCAAAGG
AAGATCGTTTTACACTTCGCGGGGGTGGACGGTGCCTTTTTTGCGTGGGT
GAATGGTCGCCTGGGCTACGATGTGCCCATCTACACGAACTTCCGGTACC
CCTTTCCGGTCACGCCTCCGGAGGTACCCGCCACGAACCCCACCGGGTGT
TACCGTCTCGCTTTCTCCGTCCCCGAGGCCTGGGTTCGGCCCGACGCGAT
CTCGGAGCAAAGGAAGATCGTTTTACACTTCGCGGGGGTGGACGGTGCCT
TTTTTGCGTGGGTGAATGGTCGCCTGGCTGGATTTTCTAAGGACAGTCGC
CTGCCGGCGGAGTTTGACGTCACCGACAAGATCAATATCGAGTCGCCGTC
GGAGAACGTGCTATCGGTGATGGTGCTTCGCTGGAGCGACGCTTCCTACC
TAGAAGATCAGGCTGGATTTTCTAAGGACAGTCGCCTGCCGGCGGAGTTT
GACGTCACCGACAAGATCAATATCGAGTCGCCGTCGGAGAACGTGCTATC
GGTGATGGTGCTTCGCTGGAGCGACGCTTCCTACCTAGAAGATCAG
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