mRNA_H-elongata_contig10864.703.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig10864.703.1 vs. uniprot
Match: A0A6H5KSX3_9PHAE (ATP-grasp domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KSX3_9PHAE) HSP 1 Score: 343 bits (881), Expect = 4.170e-112 Identity = 171/232 (73.71%), Postives = 188/232 (81.03%), Query Frame = 1
Query: 1 AMAIWRYDKRPVNGAPFVYFSTQLMPSDGDDARRVAEYAFQALDALGVTFGPTHTEVMMV----GNGXXXXXXXXXXXLNRAGGRGTPTLIEVNTRWHLTDFAPLTDACVGYNAVEETLAAYLDPGRFDLLPRLPPAGPGCRHGRVVHLVSHVEGTLERIHHREEIRRMESFAGIDVYPDPAGGGSGVLKKTIDIRSDAGWVRLVHDDERIVERDYRRVVELMPTMYEVSAE 684
A+AIWRYDKRP NGAPFVYFS +LMPSDG ++V EYAF+ALDALG+ FGPTHTE+MMV GN + G GTPTL+EVNTRWHLTDFAPLTDACVGYNAVEETLAAYLDPGRFD LPR+P G R+GRVVHLVS+VEGTLERI H EEIR +ESFAGIDVY DP GGSG +KKTIDIRSDAGWVRLVH+ E +VERDYRRVVELMPTMYEVS +
Sbjct: 403 AVAIWRYDKRPANGAPFVYFSVKLMPSDGQAEQKVVEYAFKALDALGIKFGPTHTEIMMVDAHGGNDG-----------TTSSGEGTPTLVEVNTRWHLTDFAPLTDACVGYNAVEETLAAYLDPGRFDALPRVPSTGKDSRYGRVVHLVSYVEGTLERIFHEEEIRNLESFAGIDVYADPKNGGSGHVKKTIDIRSDAGWVRLVHEKEEVVERDYRRVVELMPTMYEVSGD 623
BLAST of mRNA_H-elongata_contig10864.703.1 vs. uniprot
Match: A0A835ZA87_9STRA (ATP-grasp domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA87_9STRA) HSP 1 Score: 203 bits (517), Expect = 4.190e-61 Identity = 114/232 (49.14%), Postives = 135/232 (58.19%), Query Frame = 1
Query: 1 AMAIWRYDKRPVNGAPFVYFSTQLMPSDGDDARRVAEYAFQALDALGVTFGPTHTEVMMVGNGXXXXXXXXXXXLNRAGGRGTPTLIEVNTRWHLTDFAPLTDACVGYNAVEETLAAYLDPGRFDLLPRLPPAGPGCRHGRVVHLVSHVEGTLERIHHREEIRRMESFAGIDVYPDPAGGGSGV---LKKTIDIRSDAGWVRLVHDDERIVERDYRRVVELMPTMYEVSAES 687
AMA+WRYDKRP NGAPFVY +T+L + G + V YA QALDALGV G H EVM+ +G P LIE N RWHLTDF L + CVGYNA++ T+ AYLD FD LP P GRVVHLV H GT+ + H IR + SF +DVY G GV + TIDIRSDAGWV L H D +VE DYR +V LMPTM+EV ++
Sbjct: 114 AMAVWRYDKRPANGAPFVYHATELRAASGREEGAVVAYAMQALDALGVRIGTAHIEVMLTRDG--------------------PRLIEYNGRWHLTDFRELCNDCVGYNAIDATVDAYLDHEAFDALPPAPLKLAAA--GRVVHLVCHTAGTVAAVRHGAAIRALRSFRAMDVY-----GAFGVGQRVSPTIDIRSDAGWVHLSHADAHVVEEDYRALVALMPTMFEVEVDA 318
BLAST of mRNA_H-elongata_contig10864.703.1 vs. uniprot
Match: A0A7S2U7R4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U7R4_9STRA) HSP 1 Score: 182 bits (462), Expect = 3.410e-49 Identity = 108/257 (42.02%), Postives = 148/257 (57.59%), Query Frame = 1
Query: 7 AIWRYDKRPVNGAPFVYFSTQLMPSDGDDARRVAEYAFQALDALGVTFGPTHTEVMMVGNGXXXXXXXXXXXLNRAGGRGTPTLIEVNTRWHLTDFAPLTDACVGYNAVEETLAAYLDPG------------RFDLLPRLPPAGPGCRHGRVVHLVSHVEGTLERIHH--REEIRRMESFAGIDVYPDPAGGGSGVLKKTIDIRSDAGWVRLVHDDERIVERDYRRVVELMPTMYEVSAE-----SASFQSDRNDKA 720
A+WRYDKRP+NGAPFVY +T+++ +D R V +YA Q+LDALGV +G +H EV+ +P L+EVN R H TDFAPLT AC+GYNA++ LAAYL ++D LP LP +G +VHLV HVEGT+ ++ EI MES +D+YP G+ V KT+DIR+DAG + +++DDE +RDY R+VELMP ++ V +E S Q + +D A
Sbjct: 619 ALWRYDKRPMNGAPFVYHATEVVDADTTVGRAVCQYAMQSLDALGVHWGTSHVEVIAPDGDES----------------SSPRLVEVNCRQHNTDFAPLTSACMGYNALDMLLAAYLGDATEFPPNTEHMRLKWDTLPDLPVTRG---YGAIVHLVCHVEGTITGVNRDAMNEIEHMESVLNMDIYPQFLKIGNHV-SKTVDIRTDAGAIHIMNDDEEQFQRDYERIVELMPDLFPVDSEKDEATSEDIQGNASDNA 855
BLAST of mRNA_H-elongata_contig10864.703.1 vs. uniprot
Match: A0A7S4RER7_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RER7_9STRA) HSP 1 Score: 174 bits (440), Expect = 4.140e-46 Identity = 103/247 (41.70%), Postives = 141/247 (57.09%), Query Frame = 1
Query: 7 AIWRYDKRPVNGAPFVYFSTQLMPSDGDDARRVAEYAFQALDALGVTFGPTHTEVMMVGNGXXXXXXXXXXXLNRAGGRGTPTLIEVNTRWHLTDFAPLTDACVGYNAVEETLAAYLDPGRFDLLPR-----------LPPAGPGCRHGRVVHLVSHVEGTLERIHHR--EEIRRMESFAGIDVYPDPAGGGSGVLKKTIDIRSDAGWVRLVHDDERIVERDYRRVVELMPTMYEVSAESASFQSDR 708
A+W+YDKR +NGAPFVY +T+L+ +D R V EYA +ALDAL V +G +HTE+++ + P L+EVN R H TDFAPLT A VGYNA++ LAAYL G D P LP +G +VHL SHVEGT+E +++ EEI M S ++VYP GS ++KT+DIRSD GWV +++D+E +DY R++ LM M++V E +R
Sbjct: 634 ALWKYDKRSINGAPFVYHATELVDADTKVGRAVCEYAMEALDALNVHWGLSHTEIIV--------------EEDNENAEPQPRLVEVNCRQHNTDFAPLTTAAVGYNALDMLLAAYL--GDADDFPPHTEHMRLVWNDLPDLPVTRAYGAIVHLASHVEGTIEEVNYEALEEIEGMPSVMAMEVYPQFLSLGS-EIQKTVDIRSDTGWVHIMNDNEEQFLKDYNRIIWLMEKMFKVEEEEEXXXXER 863
BLAST of mRNA_H-elongata_contig10864.703.1 vs. uniprot
Match: A0A7S4JSX9_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JSX9_9STRA) HSP 1 Score: 172 bits (436), Expect = 1.720e-45 Identity = 106/250 (42.40%), Postives = 144/250 (57.60%), Query Frame = 1
Query: 7 AIWRYDKRPVNGAPFVYFSTQLMPSDGDDARRVAEYAFQALDALGVTFGPTHTEVMMVGNGXXXXXXXXXXXLNRAGGRGTPTLIEVNTRWHLTDFAPLTDACVGYNAVEETLAAYLDPGRFDLLP------RLP----PAGPGCR-HGRVVHLVSHVEGTLERIHHR--EEIRRMESFAGIDVYPDPAGGGSGVLKKTIDIRSDAGWVRLVHDDERIVERDYRRVVELMPTMYEVSAESASFQSDRNDK 717
A+W+YDKRPVNGAPFVY +T+L+ +D + R V YA +LDAL V +G +HTE+++ R P L+EVN R H TDFAPLT AC+GYNA++ LAAYL G D P RLP P P +G +VHLVSH EGTL ++ EE+ M+ ++VYP + G + +KT+DIR+DAGW L+ DD + Y R+VELMP ++ V+ E A + +K
Sbjct: 832 ALWKYDKRPVNGAPFVYHATELVDADTEVGRAVCAYAMDSLDALDVHWGMSHTEIIV----------DFEEDPETGETRPRPRLVEVNCRQHNTDFAPLTTACIGYNALDMLLAAYL--GDADEFPPNTEHKRLPWNDLPDLPVTHSYGAIVHLVSHAEGTLRAVNQDALEEVEDMKGVVAMEVYPQCSAVGESI-RKTVDIRTDAGWCHLMGDDATEFKDQYDRIVELMPKLF-VTEEDARKEEAEKEK 1067
BLAST of mRNA_H-elongata_contig10864.703.1 vs. uniprot
Match: A0A7S3UVF3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UVF3_HETAK) HSP 1 Score: 159 bits (402), Expect = 4.730e-44 Identity = 94/242 (38.84%), Postives = 130/242 (53.72%), Query Frame = 1
Query: 4 MAIWRYDKRPVNGAPFVYFSTQLMPSDGDDARRVAEYAFQALDALGVTFGPTHTEVMMVGNGXXXXXXXXXXXLNRAGGRGTPTLIEVNTRWHLTDFAPLTDACVGYNAVE--------ETLAAYLDPGRFDLLPRLPPAGPGCR-------------HGRVVHLVSHVEGTLERIHHREEIRRMESFAGIDVYPDPAGGGSGVLKKTIDIRSDAGWVRLVHDDERIVERDYRRVVELMPTM 666
+ +W+YDKRP NGAPFVY STQL+P+ G+ +RV +Y + LDAL + +GP HTEV++ G P L+EVN RWHL D APLT ACVG +AV E A+ D G +LP R HG +VHLV VEG LER+ H + + + +D++P+ A G+ V K T+DI++DAG V L+ D +ERDY +++L +M
Sbjct: 83 VGLWKYDKRPANGAPFVYHSTQLVPAKGEVEQRVLDYVVEVLDALEIQYGPAHTEVIVTDQG--------------------PALVEVNGRWHLADVAPLTRACVGRDAVALSADALLPECREAFHDAGPDGVLPSATAGEEPVRVIAYRGYPMSFQRHGMIVHLVCGVEGELERVDHLGALGALGTALAVDLFPEFAEPGARVTK-TVDIKTDAGAVTLLADSLEELERDYATILDLQKSM 303
BLAST of mRNA_H-elongata_contig10864.703.1 vs. uniprot
Match: A0A7S1TTP0_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TTP0_9STRA) HSP 1 Score: 163 bits (412), Expect = 1.090e-43 Identity = 95/226 (42.04%), Postives = 130/226 (57.52%), Query Frame = 1
Query: 4 MAIWRYDKRPVNGAPFVYFSTQLMPSDG-DDARRVAEYAFQALDALGVTFGPTHTEVMMVGNGXXXXXXXXXXXLNRAGGRGTPTLIEVNTRWHLTDFAPLTDACVGYNAVEETLAAYLDPGRFDLLPRLPPAGPGCRHGRVVHLVSHVEGTLERIHHREEIRRMESFAGIDVYPDPAGGGSGVLKKTIDIRSDAGWVRLVHDDERIVERDYRRVVELMPTMYEVS 678
+A+W Y K NG FVY +T+L P+ DDA V Y +DALGV+ GPTHTE+ M +G P LIEVN RWH TDF+ + +ACVGYNA + TL AYL P R LP++P HGR+VHLV + EGT+ + H E + +ES V+ + G G V T+DIR+DAG+ L H+D +VERDY++++E M++V+
Sbjct: 302 VAVWEYHKIAANGGAFVYSATKLKPTATLDDAGGVYSYVADVMDALGVSHGPTHTELRMTKSG--------------------PVLIEVNCRWHDTDFSGICNACVGYNAHDLTLDAYLRPERVRDLPKMPLDLQA--HGRIVHLVCYAEGTVREVRHEAEAQALESCRAFKVHEE-FGVGEAVTP-TVDIRTDAGFAILWHEDPEVVERDYQQILEWQKDMFDVT 503
BLAST of mRNA_H-elongata_contig10864.703.1 vs. uniprot
Match: A0A7S1YRH0_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YRH0_9STRA) HSP 1 Score: 154 bits (390), Expect = 1.000e-41 Identity = 92/241 (38.17%), Postives = 135/241 (56.02%), Query Frame = 1
Query: 7 AIWRYDKRPVNGAPFVYFSTQLMPSDGDDARRVAEYAFQALDALGVTFGPTHTEVMMVGNGXXXXXXXXXXXLNRAGGRGTPTLIEVNTRWHLTDFAPLTDACVGYNAVEETLAAYL-------------DPGR--FDLLPRLPPAGPGCRHGRVVHLVSHVEGTLERIHHR--EEIRRMESFAGIDVYPDPAGGGSGVLKKTIDIRSDAGWVRLVHDDERIVERDYRRVVELMPTMYEVS 678
A+W YDKRP NGA FVY++T+L DG++ + Y + LDAL + +G TH E+++ +G P L+EVN R H DF PLT C+GYN + L AYL +P R +D+LP PP +G +VHLV++ GTL R++ EI+RM S ++VYP G+ + TIDIR+DAGWV++V+ + ++DY R++ELMPT++E +
Sbjct: 138 AVWIYDKRPANGASFVYYATKLY--DGENMDELCNYVRKTLDALDIKWGITHNEIILTADG--------------------PRLVEVNCRQHNMDFIPLTMECIGYNIFDMLLGAYLGGEDDPFVYPMETEPERLNWDILPSNPPKR---MNGAMVHLVNYANGTLTRLNEDALREIQRMPSVMNMEVYPPFLQMGN-TISPTIDIRTDAGWVQMVNPNPNEFQKDYDRIIELMPTLFEAN 352
BLAST of mRNA_H-elongata_contig10864.703.1 vs. uniprot
Match: A0A1Z5JBC6_FISSO (ATP-grasp domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JBC6_FISSO) HSP 1 Score: 157 bits (398), Expect = 1.160e-41 Identity = 91/234 (38.89%), Postives = 133/234 (56.84%), Query Frame = 1
Query: 7 AIWRYDKRPVNGAPFVYFSTQLMPSDGDD-ARRVAEYAFQALDALGVTFGPTHTEVMMVGNGXXXXXXXXXXXLNRAGGRGTPTLIEVNTRWHLTDFAPLTDACVGYNAVEETLAAYLD-PGRFDLLPRLPPAGPGCRHGRVVHLVSHVEGTLERIHHREEIRRMESFAGIDVYPDPAGGGSGVLKKTIDIRSDAGWVRLVHDDERIVERDYRRVVELMPTMYEVSAESASFQS 702
AIWRYDKRP NGA F YF T+L+ + D+ V +Y L+ LGV +G +H EV++ + PTL+EVN R H DFAPLT AC+ YNA + L AY +D P LP HG +VHLV++ G+L ++HH E++ + S ++VY + S L+ TIDIR+DAGWV+L+++D ++ DY ++V MP M+ VSA+ + ++
Sbjct: 282 AIWRYDKRPANGAAFCYFQTKLVDAAADEHVTAVCDYVISTLNTLGVQWGLSHNEVIVRSDTLQ------------------PTLVEVNCRQHNMDFAPLTMACIRYNAFQMLLDAYFGGDDEWDRYPELPTLQA---HGCMVHLVNYARGSLVQVHHLEDMAALPSVLDLEVYAEFQ-TPSTWLEPTIDIRTDAGWVQLINEDPEALQHDYEQIVAWMPKMFSVSADDSKVKN 493
BLAST of mRNA_H-elongata_contig10864.703.1 vs. uniprot
Match: A0A7S4T2U0_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4T2U0_9STRA) HSP 1 Score: 154 bits (390), Expect = 1.940e-40 Identity = 92/241 (38.17%), Postives = 135/241 (56.02%), Query Frame = 1
Query: 7 AIWRYDKRPVNGAPFVYFSTQLMPSDGDDARRVAEYAFQALDALGVTFGPTHTEVMMVGNGXXXXXXXXXXXLNRAGGRGTPTLIEVNTRWHLTDFAPLTDACVGYNAVEETLAAYL-------------DPGR--FDLLPRLPPAGPGCRHGRVVHLVSHVEGTLERIHHR--EEIRRMESFAGIDVYPDPAGGGSGVLKKTIDIRSDAGWVRLVHDDERIVERDYRRVVELMPTMYEVS 678
A+W YDKRP NGA FVY++T+L DG++ + Y + LDAL + +G TH E+++ +G P L+EVN R H DF PLT C+GYN + L AYL +P R +D+LP PP +G +VHLV++ GTL R++ EI+RM S ++VYP G+ + TIDIR+DAGWV++V+ + ++DY R++ELMPT++E +
Sbjct: 299 AVWIYDKRPANGASFVYYATKLY--DGENMDELCNYVRKTLDALDIKWGITHNEIILTADG--------------------PRLVEVNCRQHNMDFIPLTMECIGYNIFDMLLGAYLGGEDDPFVYPMETEPERLNWDILPSNPPKR---MNGAMVHLVNYANGTLTRLNEDALREIQRMPSVMNMEVYPPFLQMGN-TISPTIDIRTDAGWVQMVNPNPNEFQKDYDRIIELMPTLFEAN 513 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10864.703.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig10864.703.1 >prot_H-elongata_contig10864.703.1 ID=prot_H-elongata_contig10864.703.1|Name=mRNA_H-elongata_contig10864.703.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=240bp MAIWRYDKRPVNGAPFVYFSTQLMPSDGDDARRVAEYAFQALDALGVTFGback to top mRNA from alignment at H-elongata_contig10864:4774..7425+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig10864.703.1 ID=mRNA_H-elongata_contig10864.703.1|Name=mRNA_H-elongata_contig10864.703.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2652bp|location=Sequence derived from alignment at H-elongata_contig10864:4774..7425+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig10864:4774..7425+ >mRNA_H-elongata_contig10864.703.1 ID=mRNA_H-elongata_contig10864.703.1|Name=mRNA_H-elongata_contig10864.703.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1440bp|location=Sequence derived from alignment at H-elongata_contig10864:4774..7425+ (Himanthalia elongata Himel1 dioecious)back to top |