mRNA_H-elongata_contig108167.664.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig108167.664.1
Unique NamemRNA_H-elongata_contig108167.664.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig108167.664.1 vs. uniprot
Match: A0A6H5JLN0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN0_9PHAE)

HSP 1 Score: 180 bits (456), Expect = 1.490e-49
Identity = 113/336 (33.63%), Postives = 179/336 (53.27%), Query Frame = 1
Query:    1 SIRMILATAATKDGELYHFDAEKAFLKVDIDEELDIEILEGYE*FPGAVGRLNKTIYGLVQVDRCCANKFYDDVTTIGFKQSNEDPCMFLKVVDGEAEMVGVVHVDDILTRNREKATMDRFAAELGQKFKLKDMVDARYYMGCHITRNRKARELKINPHLYVEPMTTS-------SVPT-----LSNADEPRNLDKEEIRKFPYWEAVEVLMWTATMTRQYIASVIRAVVKFCENPGPAHNKTVMKIMQYLLYKKDWAIKYG-GQSNELWMEAYTTRIFLSYLDTRLSVSGAVLMLAKGAISWYSRMHEVTASRTSDSEYVTLSEAVKEVLFLRQV 969
            S+R++ A A  ++  L HFD ++AF++ D+DE++ + + EG     G + +LNK++YGL Q  R   +     +  +GF Q   D C+F  + +G   +  VVHVDDI +   E+   D+F  +L     +K++ D R+Y GC   R+  A  LKI+   Y E +           +P      LS  D+      EE+  +P+ E +  LMW AT TR  IA+ +RAV ++C +P   H +  + I+ Y++   D  I +  G    L ME +    + S    R SVSG ++M   G ISW+SR  +     T+++EYV+L++ +KEVLFLRQV
Sbjct:   20 SVRLLAAMACEQNLSLRHFDIKQAFVQSDLDEDVFMRLPEGCGRLSGMIVKLNKSLYGLKQASRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGEEERC-DQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLKLSEFDQD-----EEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQV 349          
BLAST of mRNA_H-elongata_contig108167.664.1 vs. uniprot
Match: A0A6H5KQB8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQB8_9PHAE)

HSP 1 Score: 180 bits (456), Expect = 3.270e-48
Identity = 113/336 (33.63%), Postives = 179/336 (53.27%), Query Frame = 1
Query:    1 SIRMILATAATKDGELYHFDAEKAFLKVDIDEELDIEILEGYE*FPGAVGRLNKTIYGLVQVDRCCANKFYDDVTTIGFKQSNEDPCMFLKVVDGEAEMVGVVHVDDILTRNREKATMDRFAAELGQKFKLKDMVDARYYMGCHITRNRKARELKINPHLYVEPMTTS-------SVPT-----LSNADEPRNLDKEEIRKFPYWEAVEVLMWTATMTRQYIASVIRAVVKFCENPGPAHNKTVMKIMQYLLYKKDWAIKYG-GQSNELWMEAYTTRIFLSYLDTRLSVSGAVLMLAKGAISWYSRMHEVTASRTSDSEYVTLSEAVKEVLFLRQV 969
            S+R++ A A  ++  L HFD ++AF++ D+DE++ + + EG     G + +LNK++YGL Q  R   +     +  +GF Q   D C+F  + +G   +  VVHVDDI +   E+   D+F  +L     +K++ D R+Y GC   R+  A  LKI+   Y E +           +P      LS  D+      EE+  +P+ E +  LMW AT TR  IA+ +RAV ++C +P   H +  + I+ Y++   D  I +  G    L ME +    + S    R SVSG ++M   G ISW+SR  +     T+++EYV+L++ +KEVLFLRQV
Sbjct:  194 SVRLLAAMACEQNLSLRHFDIKQAFVQSDLDEDVFMRLPEGCGRLSGMIVKLNKSLYGLKQASRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGEEERC-DQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLKLSEFDQD-----EEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQV 523          
BLAST of mRNA_H-elongata_contig108167.664.1 vs. uniprot
Match: A0A6H5K2R1_9PHAE (Integrase catalytic domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2R1_9PHAE)

HSP 1 Score: 180 bits (456), Expect = 5.080e-47
Identity = 113/336 (33.63%), Postives = 179/336 (53.27%), Query Frame = 1
Query:    1 SIRMILATAATKDGELYHFDAEKAFLKVDIDEELDIEILEGYE*FPGAVGRLNKTIYGLVQVDRCCANKFYDDVTTIGFKQSNEDPCMFLKVVDGEAEMVGVVHVDDILTRNREKATMDRFAAELGQKFKLKDMVDARYYMGCHITRNRKARELKINPHLYVEPMTTS-------SVPT-----LSNADEPRNLDKEEIRKFPYWEAVEVLMWTATMTRQYIASVIRAVVKFCENPGPAHNKTVMKIMQYLLYKKDWAIKYG-GQSNELWMEAYTTRIFLSYLDTRLSVSGAVLMLAKGAISWYSRMHEVTASRTSDSEYVTLSEAVKEVLFLRQV 969
            S+R++ A A  ++  L HFD ++AF++ D+DE++ + + EG     G + +LNK++YGL Q  R   +     +  +GF Q   D C+F  + +G   +  VVHVDDI +   E+   D+F  +L     +K++ D R+Y GC   R+  A  LKI+   Y E +           +P      LS  D+      EE+  +P+ E +  LMW AT TR  IA+ +RAV ++C +P   H +  + I+ Y++   D  I +  G    L ME +    + S    R SVSG ++M   G ISW+SR  +     T+++EYV+L++ +KEVLFLRQV
Sbjct:  715 SVRLLAAMACEQNLSLRHFDIKQAFVQSDLDEDVFMRLPEGCGRLSGMIVKLNKSLYGLKQASRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGEEERC-DQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLKLSEFDQD-----EEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQV 1044          
BLAST of mRNA_H-elongata_contig108167.664.1 vs. uniprot
Match: A0A0A9Z683_LYGHE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=3 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9Z683_LYGHE)

HSP 1 Score: 176 bits (446), Expect = 1.150e-45
Identity = 115/338 (34.02%), Postives = 190/338 (56.21%), Query Frame = 1
Query:    1 SIRMILATAATKDGELYHFDAEKAFLKVDIDEELDIEILEGYE*FPGAVGRLNKTIYGLVQVDRCCANKFYDDVTTIGFKQSNEDPCMFLKVVDGEAEMVGV-VHVDDILTRNREKATMDRFAAELGQKFKLKDMVDARYYMGCHITRNRKARELKINPHLYVE------------PMTTSSVPT--LSNADEPRNLD-KEEIRKFPYWEAVEVLMWTATMTRQYIASVIRAVVKFCENPGPAHNKTVMKIMQYLLYKKDWAIKYGG-QSNELWMEAYTTRIFLSYLDTRLSVSGAVLMLAKGAISWYSRMHEVTASRTSDSEYVTLSEAVKEVLFLR 963
            SIR +LA AA +D +++  DA  AFL+ D+ EE+ +   EGY+   G V RL K++YGL Q  R    K    + TIG +QS  DPC++ K    + +MV V V VDD+L  + +K       ++L + FK+ D+ +A++ +G  I+R+R+ +++ ++   Y++            P  T   P   LS   +P + D ++++   PY EAV  L++ + + R  IA  +  V +F  NPGPAH   V +I++Y+    DW ++Y G +S+E+    Y    F S +D R SV+G V ++  G++SW ++    TA  T+++EY+ LS A +E L+LR
Sbjct:  932 SIRYLLALAAKRDMDIHQMDAVSAFLQGDLTEEIYMRQPEGYQ-ESGKVCRLRKSLYGLKQASRVWNIKLDRSLKTIGLRQSKFDPCIYYK--SSQKKMVFVAVWVDDLLIFSDDKKLTQEVKSQLMKCFKMTDIGEAKFVLGFQISRDRERKKIWMDQRAYIDNVLIRFGMENCNPAATPLDPNIKLSKDQQPSSPDERKKMEAIPYQEAVGSLLFASQVCRPDIAFAVSLVSRFNSNPGPAHWAAVKRILRYMKGTSDWKLEYDGTKSSEI--TGYCDSDFASDVDERKSVTGYVFLMCDGSVSWGTKKQPTTALSTTEAEYMALSAATQEALWLR 1264          
BLAST of mRNA_H-elongata_contig108167.664.1 vs. uniprot
Match: A0A1Y1IVX6_KLENI (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IVX6_KLENI)

HSP 1 Score: 165 bits (418), Expect = 5.670e-42
Identity = 104/333 (31.23%), Postives = 172/333 (51.65%), Query Frame = 1
Query:    1 SIRMILATAATKDGELYHFDAEKAFLKVDIDEELDIEILEGYE*F-PGAVGRLNKTIYGLVQVDRCCANKFYDDVTTIGFKQSNEDPCMFLKVVDGEAEMVGVVHVDDILTRNREKATMDRFAAELGQKFKLKDMVDARYYMGCHITRNRKARELKINPHLY---------VEPMTTSSVPTLSNADEPRNLDKEEIRKFPYWEAVEVLMWTATMTRQYIASVIRAVVKFCENPGPAHNKTVMKIMQYLLYKKDWAIKYGGQSNELWMEAYTTRIFLSYLDTRLSVSGAVLMLAKGAISWYSRMHEVTASRTSDSEYVTLSEAVKEVLFLRQV 969
            ++R +L   A +D EL+  D + AFL  +++EE+ ++  +GYE   P  V RL KTIYGL Q  R    K   ++  I F+ S  D  +F  V+DGE   V VV VDDIL   + +  + +  A L +KF ++D+  A Y++G  +TR+R+AR +K+              +E     S P  S     R  D  +  K+PY E V  L++ +  TR  IA  + A+ ++   P   H +  + + +YL    +  + +GG +  L    Y    +   +D+R S +G V ++  GA SW SR+    A+ T ++EY++ + A KE L+L+++
Sbjct:  653 TLRALLGVVAARDLELHQLDVKTAFLNGELEEEIYMQQPQGYEQGGPETVCRLKKTIYGLRQAPRAWHQKLKTELGEIEFRASESDAALFTGVIDGERVWV-VVWVDDILIAAKGEQRLAKVKAHLSEKFDVRDLGPAEYFLGMELTRDRRARTIKLTQKKLTKELLGRYGLEAAKARSTPLSSGEKLQREGDPLDTGKYPYSELVGSLLYLSVCTRPDIAQAVGALARYMAGPTEEHWRAALGVARYLSGTAELGVTFGGSAEPL--VGYADADYAGDVDSRRSTTGYVFLVYGGAASWSSRLQPTVAASTVEAEYMSAASAAKEALWLKKL 982          
BLAST of mRNA_H-elongata_contig108167.664.1 vs. uniprot
Match: A0A1Y1IQX0_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IQX0_KLENI)

HSP 1 Score: 163 bits (413), Expect = 2.800e-41
Identity = 104/333 (31.23%), Postives = 172/333 (51.65%), Query Frame = 1
Query:    1 SIRMILATAATKDGELYHFDAEKAFLKVDIDEELDIEILEGYE*F-PGAVGRLNKTIYGLVQVDRCCANKFYDDVTTIGFKQSNEDPCMFLKVVDGEAEMVGVVHVDDILTRNREKATMDRFAAELGQKFKLKDMVDARYYMGCHITRNRKARELKINP---------HLYVEPMTTSSVPTLSNADEPRNLDKEEIRKFPYWEAVEVLMWTATMTRQYIASVIRAVVKFCENPGPAHNKTVMKIMQYLLYKKDWAIKYGGQSNELWMEAYTTRIFLSYLDTRLSVSGAVLMLAKGAISWYSRMHEVTASRTSDSEYVTLSEAVKEVLFLRQV 969
            ++R +L   A +D EL+  D + AFL  +++EE+ ++  +GYE   P  V RL KTIYGL Q  R    +   ++  I F+ S  D  +F  VVDGE   V VV VDDIL     +  + +  A L +KF ++D+  A Y++G  +TR+R+AR +K+              +E     S P  S     +  D  +  K+PY E V  L++ +  TR  IA  + A+ ++   P   H +  + +++YL    +  + +GG +  L    Y    +   +D+R S +G V ++  GA SW SR+    A+ T ++EY++ + A KE L+LR++
Sbjct:  928 TLRALLGVVAARDLELHQLDVKTAFLNGELEEEIYMQQPQGYEQGGPKTVCRLKKTIYGLRQAPRAWHQRLKAELGEIEFQASESDAALFTGVVDGERVWV-VVWVDDILIAAAGEKRLAKVKAHLSRKFDVRDLGPAEYFLGMELTRDRRARTVKLTQKKLTKELLGRYELEAAKARSTPLSSGEKLQKEGDPLDTGKYPYSELVGSLLYLSVCTRPDIAQAVGALARYMSGPTQEHWRAALGVVRYLSGTAELGVTFGGSAEPL--VGYADADYAGDVDSRRSTTGYVFLVYGGAASWSSRLQPTVAASTVEAEYMSAASAAKEALWLRKL 1257          
BLAST of mRNA_H-elongata_contig108167.664.1 vs. uniprot
Match: G8DCY4_PHAVU (Putative gag/pol polyprotein n=1 Tax=Phaseolus vulgaris TaxID=3885 RepID=G8DCY4_PHAVU)

HSP 1 Score: 159 bits (402), Expect = 8.350e-40
Identity = 107/340 (31.47%), Postives = 181/340 (53.24%), Query Frame = 1
Query:    1 SIRMILATAATKDGELYHFDAEKAFLKVDIDEELDIEILEGY--E*FPGAVGRLNKTIYGLVQVDRCCANKFYDDVTTIGFKQSNEDPCMFLKVVDGEAEMVGVVHVDDILTRNREKATMDRFAAELGQKFKLKDMVDARYYMGCHITRNRKARELKINPHLYV---------EPMTTSSVPT-----LSNADEPR-NLDKEEIRKFPYWEAVEVLMWTATMTRQYIASVIRAVVKFCENPGPAHNKTVMKIMQYLLYKKDWAIKYGGQSNELWMEAYTTRIFLSYLDTRLSVSGAVLMLAKGAISWYSRMHEVTASRTSDSEYVTLSEAVKEVLFLRQV 969
            SIR++L+ AAT D E+   D + AFL  D++EE+ ++  +G+  E     V RL K++YGL Q  R    KF   +   G+K++  D C+F+K    +  ++ +++VDDIL   ++ + ++R   +L + F +KDM  A+  +G  I R+R+ ++L ++   YV         E     S P      LS    P    +K ++++ PY  AV  LM+    TR  IA V+  V +F  NPG  H   V  I++YL       + +GG    L    YT       +D+R S SG V+  A GA++W SR+ +  A  T+++E++ ++EA KE+L+++++
Sbjct:  847 SIRIVLSLAATLDLEVEQMDVKTAFLHGDLEEEIYMKQPDGFLVEGKEDHVCRLRKSLYGLKQAPRQWYKKFESVMCEQGYKKTTSDHCVFVKKFANDDFIILLLYVDDILIVGKDISMINRLKKQLSESFAMKDMGAAKQILGIRIMRDRQEKKLWLSQENYVKRVLQRFQMENAKVVSTPLATHFKLSTKQSPSYEYEKSDMQRIPYASAVGSLMYAMVCTRPDIAHVVGTVSRFMSNPGREHWNAVKWILRYLRGTTCLRLCFGGDKPTL--VGYTDSDMGGDIDSRRSTSGYVIKFAGGAVAWQSRLQKCVALSTTEAEFIAITEACKELLWVKKL 1184          
BLAST of mRNA_H-elongata_contig108167.664.1 vs. uniprot
Match: A0A6H5KKG5_9PHAE (Integrase catalytic domain-containing protein n=6 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKG5_9PHAE)

HSP 1 Score: 158 bits (400), Expect = 1.420e-39
Identity = 104/331 (31.42%), Postives = 169/331 (51.06%), Query Frame = 1
Query:    1 SIRMILATAATKDGELYHFDAEKAFLKVDIDEELDIEILEGYE*FPGAVGRLNKTIYGLVQVDRCCANKFYDDVTTIGFKQSNEDPCMFLKVVDGEAEMVGVVHVDDILTRNREKATMDRFAAELGQKFKLKDMVDARYYMGCHITRNRKARELKINPHLYVEPMTTS-------SVPT-----LSNADEPRNLDKEEIRKFPYWEAVEVLMWTATMTRQYIASVIRAVVKFCENPGPAHNKTVMKIMQYLLYKKDWAIKYG-GQSNELWMEAYTTRIFLSYLDTRLSVSGAVLMLAKGAISWYSRMHEVTASRTSDSEYVTLSEAVKEVL 954
            S+R++ A A  ++  L HFD ++AF++ D+DE++ + + EG     G + +LNK++YGL Q  R   +     +  +GF Q   D C+F  + +G   +  VVHVD I +   E+   D+F  +L     +K++ D R+Y GC   R+  A  LKI+   Y E +           +P      LS  D+      EE+  +P+   +  LMW AT TR  IA+ +RAV ++C +P   H +  + I+ Y++   D  I +  G    L ME +           R SVSG ++M   G ISW+SR  +     T+++EY +L++ +KEVL
Sbjct:  745 SVRLLAAMACEQNLSLRHFDIKQAFVQSDLDEDVFMRLPEGCGRLSGMIVKLNKSLYGLKQASRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDFIFSIGEEERC-DQFGRDLNTMVPVKNLGDLRWYSGCLYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLKLSEFDQD-----EEVVSWPFRGLIGSLMWLATQTRPDIANAVRAVERYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVARLSMEVFADADCARKAADRRSVSGGLVMCVGGCISWFSRTQKCVTLSTTEAEYASLADVMKEVL 1069          
BLAST of mRNA_H-elongata_contig108167.664.1 vs. uniprot
Match: A0A6H5FV69_9HEMI (Uncharacterized protein n=2 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5FV69_9HEMI)

HSP 1 Score: 158 bits (400), Expect = 1.470e-39
Identity = 108/338 (31.95%), Postives = 176/338 (52.07%), Query Frame = 1
Query:    1 SIRMILATAATKDGELYHFDAEKAFLKVDIDEELDIEILEGYE*FPGAVGRLNKTIYGLVQVDRCCANKFYDDVTTIGFKQSNEDPCMFLKVVDGEAEMVGVVHVDDILTRNREKATMDRFAAELGQKFKLKDMVDARYYMGCHITRNRKARELKINPHLYVEPMTT--------------SSVPTLSNADEPRNLDKE-EIRKFPYWEAVEVLMWTATMTRQYIASVIRAVVKFCENPGPAHNKTVMKIMQYLLYKKDWAIKYGGQSNELWMEAYTTRIFLSYLDTRLSVSGAVLMLAKGAISWYSRMHEVTASRTSDSEYVTLSEAVKEVLFLRQV 969
            SIR I A AA  D ++   DA  AFL+ D+ EE+ +    GY      V RL K+IYGL Q  R    K    +  IG  QS  D C++ K  DG   +V V  VDD L  +  K    +    L + FK+ DM  A++ +G  ITR+R ++++ I+   Y+E +                SS   LS+  EP++ ++  ++ K PY EAV  L++ + ++R  IA  + +V +F  NPGPAH   V +I++Y+    D+ +++ G  + + M  Y    + + +D R S++G + +     ISW ++     A  T+++EY++LS A +E L+LR +
Sbjct:  482 SIRFIFALAAQLDLDIDQMDAVSAFLQGDLTEEIYMTQPIGYRDNTNRVCRLKKSIYGLKQASRAWNLKLDACLKEIGLLQSKFDTCVYYKRSDGGLLIVAV-WVDDFLIFSDNKKLKKQLKTHLTKTFKMTDMGAAKFVLGFQITRDRNSKKIWISQQAYLEQVLKRFNMENSNPSRIPMSSNEKLSHQQEPKSEEERMKMNKIPYQEAVGSLLFASQVSRPDIAQAVNSVSRFNGNPGPAHWIAVKRILRYVRGTTDYKLQFDGNKSSV-MHGYCDADWAADIDERRSLTGYIFVKCDAPISWCTKRQPTVALSTTEAEYMSLSAATQEALWLRGI 817          
BLAST of mRNA_H-elongata_contig108167.664.1 vs. uniprot
Match: A0A438IDT7_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438IDT7_VITVI)

HSP 1 Score: 157 bits (397), Expect = 2.540e-39
Identity = 106/338 (31.36%), Postives = 174/338 (51.48%), Query Frame = 1
Query:    1 SIRMILATAATKDGELYHFDAEKAFLKVDIDEELDIEILEGYE*FPGA--VGRLNKTIYGLVQVDRCCANKFYDDVTTIGFKQSNEDPCMFLKVVDGEAEMVGVVHVDDILTRNREKATMDRFAAELGQKFKLKDMVDARYYMGCHITRNRKARELKINPHLYVEPMTTS-SVPTLSNADEP--------------RNLDKEEIRKFPYWEAVEVLMWTATMTRQYIASVIRAVVKFCENPGPAHNKTVMKIMQYLLYKKDWAIKYGGQSNELWMEAYTTRIFLSYLDTRLSVSGAVLMLAKGAISWYSRMHEVTASRTSDSEYVTLSEAVKEVLFLR 963
            S R+I+A  A  D EL+  D + AFL  +IDE + +   E +E       V RL ++IYGL Q  R    KF   +T+ GFK++  D C++LK   G   ++ V++VDDIL  + +   +      L  KF +KD+ +A + +G  I R+R    L ++   Y++ + +   +   +  D P                L+K+++++FPY  AV  LM+     R  IA ++  + ++  NPG  H K   ++M+YL   KD+ + Y  +S+ L +  Y+   F   LD+R S SG + MLA GA+SW S    + AS T ++E++   EA    ++LR
Sbjct:  453 SFRIIMALVAHYDLELHQMDVKTAFLNGNIDETIYMVQPENFESNDSKQLVCRLKRSIYGLKQASRQWYRKFDQVITSFGFKENTVDQCIYLKF-SGSKFIILVLYVDDILLASSDVGLLHETKRFLSSKFDMKDLGNASFVLGIQIHRDRSRGILGLSQKAYIDKVLSRFGMSNCAPGDTPVAKGDKFSLHQCPKNELEKKDMKRFPYASAVGSLMYAQVCMRPDIAYIVGMLGRYLSNPGMDHWKKAKRVMRYLQRTKDYMLTYR-RSSHLEIVGYSDSDFAGCLDSRRSTSGYIFMLAGGAVSWKSVKQTLVASSTMEAEFIACYEASNHGIWLR 788          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig108167.664.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JLN0_9PHAE1.490e-4933.63Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KQB8_9PHAE3.270e-4833.63Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K2R1_9PHAE5.080e-4733.63Integrase catalytic domain-containing protein n=3 ... [more]
A0A0A9Z683_LYGHE1.150e-4534.02Retrovirus-related Pol polyprotein from transposon... [more]
A0A1Y1IVX6_KLENI5.670e-4231.23Integrase catalytic domain-containing protein (Fra... [more]
A0A1Y1IQX0_KLENI2.800e-4131.23Uncharacterized protein n=1 Tax=Klebsormidium nite... [more]
G8DCY4_PHAVU8.350e-4031.47Putative gag/pol polyprotein n=1 Tax=Phaseolus vul... [more]
A0A6H5KKG5_9PHAE1.420e-3931.42Integrase catalytic domain-containing protein n=6 ... [more]
A0A6H5FV69_9HEMI1.470e-3931.95Uncharacterized protein n=2 Tax=Nesidiocoris tenui... [more]
A0A438IDT7_VITVI2.540e-3931.36Retrovirus-related Pol polyprotein from transposon... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig108167contigH-elongata_contig108167:77..1084 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score113.6
Seed ortholog evalue1.2e-22
Seed eggNOG ortholog164328.Phyra85763
EggNOG free text desc.transposition, RNA-mediated
EggNOG OGs3QGIS@4776,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons2
Model size969
Cds size708
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig108167.664.1prot_H-elongata_contig108167.664.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig108167 338..1084 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929609.943202-UTR-H-elongata_contig108167:76..3371622929609.943202-UTR-H-elongata_contig108167:76..337Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig108167 77..337 +
1691679090.4226327-UTR-H-elongata_contig108167:76..3371691679090.4226327-UTR-H-elongata_contig108167:76..337Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig108167 77..337 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929609.961131-CDS-H-elongata_contig108167:337..5711622929609.961131-CDS-H-elongata_contig108167:337..571Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig108167 338..571 +
1691679090.4328542-CDS-H-elongata_contig108167:337..5711691679090.4328542-CDS-H-elongata_contig108167:337..571Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig108167 338..571 +
1622929609.9767396-CDS-H-elongata_contig108167:610..10841622929609.9767396-CDS-H-elongata_contig108167:610..1084Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig108167 611..1084 +
1691679090.4403682-CDS-H-elongata_contig108167:610..10841691679090.4403682-CDS-H-elongata_contig108167:610..1084Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig108167 611..1084 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig108167.664.1

>prot_H-elongata_contig108167.664.1 ID=prot_H-elongata_contig108167.664.1|Name=mRNA_H-elongata_contig108167.664.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=236bp
MFLKVVDGEAEMVGVVHVDDILTRNREKATMDRFAAELGQKFKLKDMVDA
RYYMGCHITRNRKARELKINPHLYVEPMTTSSVPTLSNADEPRNLDKEEI
RKFPYWEAVEVLMWTATMTRQYIASVIRAVVKFCENPGPAHNKTVMKIMQ
YLLYKKDWAIKYGGQSNELWMEAYTTRIFLSYLDTRLSVSGAVLMLAKGA
ISWYSRMHEVTASRTSDSEYVTLSEAVKEVLFLRQV
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mRNA from alignment at H-elongata_contig108167:77..1084+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig108167.664.1 ID=mRNA_H-elongata_contig108167.664.1|Name=mRNA_H-elongata_contig108167.664.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1008bp|location=Sequence derived from alignment at H-elongata_contig108167:77..1084+ (Himanthalia elongata Himel1 dioecious)
TCAATCCGGATGATTTTGGCGACGGCAGCAACCAAGGACGGAGAGCTGTA CCATTTCGACGCGGAGAAGGCATTCTTGAAGGTGGACATCGATGAAGAAT TAGACATTGAGATCCTCGAGGGGTACGAGTAGTTTCCGGGGGCAGTGGGA CGGCTCAACAAGACCATTTACGGACTCGTACAGGTGGATAGGTGCTGCGC CAACAAGTTCTACGATGACGTGACGACGATTGGATTCAAGCAGTCAAATG AAGATCCTTGCATGTTCCTTAAGGTCGTTGACGGCGAGGCGGAGATGGTG GGGGTCGTACACGTGGACGACATTCTTACCCGCAATAGAGAAAAAGCGAC GATGGATAGGTTCGCAGCTGAGCTAGGACAGAAGTTCAAATTGAAGGACA TGGTCGATGCCAGGTACTACATGGGCTGTCACATCACTAGGAACCGCAAG GCGCGCGAGTTGAAGATCAATCCACACTTATACGTGGAGCCGATGGTGGG ATAGTTCGACGTCAAGAAGACAAGCACGATATAGACAACGTCGAGTGTGC CAACACTCTCAAACGCAGACGAACCGCGGAACCTGGACAAGGAGGAAATA AGGAAGTTTCCATACTGGGAGGCAGTAGAGGTGCTTATGTGGACGGCGAC AATGACACGGCAGTACATTGCAAGCGTGATACGCGCTGTGGTCAAGTTCT GCGAAAACCCTGGGCCGGCGCATAACAAAACAGTGATGAAGATCATGCAA TATCTCCTTTACAAGAAGGATTGGGCAATTAAATACGGTGGACAGAGCAA TGAACTTTGGATGGAGGCATATACGACTCGGATTTTTTTATCATATCTGG ATACGAGATTATCGGTGTCGGGTGCGGTATTGATGCTGGCGAAGGGGGCG ATCAGCTGGTACTCAAGGATGCACGAAGTGACAGCATCACGTACCTCGGA CTCAGAGTACGTTACTTTATCAGAGGCGGTAAAGGAGGTTCTTTTTTTGA GACAGGTT
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Coding sequence (CDS) from alignment at H-elongata_contig108167:77..1084+

>mRNA_H-elongata_contig108167.664.1 ID=mRNA_H-elongata_contig108167.664.1|Name=mRNA_H-elongata_contig108167.664.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1416bp|location=Sequence derived from alignment at H-elongata_contig108167:77..1084+ (Himanthalia elongata Himel1 dioecious)
ATGTTCCTTAAGGTCGTTGACGGCGAGGCGGAGATGGTGGGGGTCGTACA
CGTGGACGACATTCTTACCCGCAATAGAGAAAAAGCGACGATGGATAGGT
TCGCAGCTGAGCTAGGACAGAAGTTCAAATTGAAGGACATGGTCGATGCC
AGGTACTACATGGGCTGTCACATCACTAGGAACCGCAAGGCGCGCGAGTT
GAAGATCAATCCACACTTATACGTGGAGCCGATGATGTTCCTTAAGGTCG
TTGACGGCGAGGCGGAGATGGTGGGGGTCGTACACGTGGACGACATTCTT
ACCCGCAATAGAGAAAAAGCGACGATGGATAGGTTCGCAGCTGAGCTAGG
ACAGAAGTTCAAATTGAAGGACATGGTCGATGCCAGGTACTACATGGGCT
GTCACATCACTAGGAACCGCAAGGCGCGCGAGTTGAAGATCAATCCACAC
TTATACGTGGAGCCGATGACAACGTCGAGTGTGCCAACACTCTCAAACGC
AGACGAACCGCGGAACCTGGACAAGGAGGAAATAAGGAAGTTTCCATACT
GGGAGGCAGTAGAGGTGCTTATGTGGACGGCGACAATGACACGGCAGTAC
ATTGCAAGCGTGATACGCGCTGTGGTCAAGTTCTGCGAAAACCCTGGGCC
GGCGCATAACAAAACAGTGATGAAGATCATGCAATATCTCCTTTACAAGA
AGGATTGGGCAATTAAATACGGTGGACAGAGCAATGAACTTTGGATGGAG
GCATATACGACTCGGATTTTTTTATCATATCTGGATACGAGATTATCGGT
GTCGGGTGCGGTATTGATGCTGGCGAAGGGGGCGATCAGCTGGTACTCAA
GGATGCACGAAGTGACAGCATCACGTACCTCGGACTCAGAGTACGTTACT
TTATCAGAGGCGGTAAAGGAGGTTCTTTTTTTGAGACAGGTTACAACGTC
GAGTGTGCCAACACTCTCAAACGCAGACGAACCGCGGAACCTGGACAAGG
AGGAAATAAGGAAGTTTCCATACTGGGAGGCAGTAGAGGTGCTTATGTGG
ACGGCGACAATGACACGGCAGTACATTGCAAGCGTGATACGCGCTGTGGT
CAAGTTCTGCGAAAACCCTGGGCCGGCGCATAACAAAACAGTGATGAAGA
TCATGCAATATCTCCTTTACAAGAAGGATTGGGCAATTAAATACGGTGGA
CAGAGCAATGAACTTTGGATGGAGGCATATACGACTCGGATTTTTTTATC
ATATCTGGATACGAGATTATCGGTGTCGGGTGCGGTATTGATGCTGGCGA
AGGGGGCGATCAGCTGGTACTCAAGGATGCACGAAGTGACAGCATCACGT
ACCTCGGACTCAGAGTACGTTACTTTATCAGAGGCGGTAAAGGAGGTTCT
TTTTTTGAGACAGGTT
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