mRNA_H-elongata_contig1069.567.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig1069.567.1 vs. uniprot
Match: D7FVL8_ECTSI (Cnd3 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVL8_ECTSI) HSP 1 Score: 486 bits (1252), Expect = 1.490e-155 Identity = 308/600 (51.33%), Postives = 370/600 (61.67%), Query Frame = 1
Query: 4 QTVRRLFTEAQRTVQCHLRCSDTLRRLLSKHEDTAWDEFFECVTRILVSGTRRSPDVERLVQFVALAAGGG-SATLLERTVGFLLSNSGAADKGVRFRCCQLLGRFTTEYSQISGMDEEHLDRVVRVLLPRLQDKVWRVREQAVVALRPFQFGLEEDEEEEEALLQEDRVRVGLITAMTSDSQPHVRQAALAAVTKTVGIIDQASSLILRTQDVDERVRKAAFRTLGEDVASKLLQPHQMLTLVKRGLSDKP-AVADACRFMLCARWFKDVGYDPVELLKRVNVLQLEYVHIQEVPEMLAREIVRLGLRASRERGDPSLGMGFTLPDAKGLRNAAGRRVHVGAALPSPSSKAADGEEISGNALVADGGGRLSPEEALFARVQAEVVKDDKEMSAVEKETRLEAILPNTTSLCEQIAVKLRELTKLLEGVTGQLEEEQEADVADELETRIEGDVFVLQQLLKIAAHVDFSEEAGRRRLVNLLQGLLVDVNMTYHLVESTMNALAAAHPSEADFVRVVAELVSDIWDLVHSRQAGDTSQNASVNTSLDASFVSALNGDNGRGNVANTPEPVDPVVIESGIRAAIPRNIVKERARAIEGISSM 1797
Q VR+LF EAQRTVQCH RCSD+L RLLSKHE +AWDE+F C+TRILV ++R P VERLV FV+LAAG +A+L +RTV FLL +SGAADK VRFRCCQLLG TTEY+Q +DEE LD V VLLPRL+DKV VR QAV ALRPFQFGLE ++E+ L++D+VR L+ AM SDS P VRQAALAAVTKTVG+ DQ L+LRTQDV E VR+AAFRTLGEDV+SKLL P Q +TLVKRGLSD AV DACRFM+C WF+D YDP+ELL+R+NV+ +E MSA EKETRLE IL +T +LC QI V +E+ +L+ DV D + R+E VFVL+QLLK+A H DF+EEAGRRRLV LLQ LL+DV+M +H VES+M ALAAAH SEADFVR+VAELVSDI DL+H+R D S + N SL+ASF S + G G+V + + S +RAAIP+N VK+RARAIEGI+ M
Sbjct: 26 QAVRKLFVEAQRTVQCHQRCSDSLPRLLSKHE-SAWDEYFSCLTRILVV-SKRDPGVERLVHFVSLAAGSDVNASLFDRTVEFLLLHSGAADKAVRFRCCQLLGTLTTEYTQRPQVDEEDLDCFVDVLLPRLRDKVAAVRVQAVGALRPFQFGLEAGDDED--ALKDDKVRSELVRAMVSDSSPDVRQAALAAVTKTVGMFDQ---LVLRTQDVKESVRRAAFRTLGEDVSSKLLSPQQRVTLVKRGLSDSSEAVVDACRFMVCVHWFRDAEYDPMELLQRLNVVNVEV------------------------------------------------------------------------------------------------------MSAGEKETRLETILTDTMTLCGQIEVVAQEVKELVSK-----------DVGDN-DARVEYQVFVLEQLLKLATHADFTEEAGRRRLVTLLQDLLLDVDMLHHTVESSMVALAAAHTSEADFVRIVAELVSDISDLIHTRPTNDVS---TQNVSLNASFASIMEG---LGDVGDGTPNRSFASMRSAVRAAIPKNFVKDRARAIEGIAPM 498
BLAST of mRNA_H-elongata_contig1069.567.1 vs. uniprot
Match: A0A6H5L8W1_9PHAE (Cnd3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8W1_9PHAE) HSP 1 Score: 410 bits (1054), Expect = 4.830e-127 Identity = 269/527 (51.04%), Postives = 324/527 (61.48%), Query Frame = 1
Query: 220 ATLLERTVGFLLSNSGAADKGVRFRCCQLLGRFTTEYSQISGMDEEHLDRVVRVLLPRLQDKVWRVREQAVVALRPFQFGLEEDEEEEEALLQEDRVRVGLITAMTSDSQPHVRQAALAAVTKTVGIIDQASSLILRTQDVDERVRKAAFRTLGEDVASKLLQPHQMLTLVKRGLSDKP-AVADACRFMLCARWFKDVGYDPVELLKRVNVLQLEYVHIQEVPEMLAREIVRLGLRASRERGDPSLGMGFTLPDAKGLRNAAGRRVHVGAALPSPSSKAADGEEISGNALVADGGGRLSPEEALFARVQAEVVKDDKEMSAVEKETRLEAILPNTTSLCEQIAVKLRELTKLLEGVTGQLEEEQEADVADELETRIEGDVFVLQQLLKIAAHVDFSEEAGRRRLVNLLQGLLVDVNMTYHLVESTMNALAAAHPSEADFVRVVAELVSDIWDLVHSRQAGDTSQNASVNTSLDASFVSALNGDNGRGNVANTPEPVDPVVIESGIRAAIPRNIVKERARAIEGISSM 1797
A+L +RTV FLL SGAADK VRFRCCQLLG TTEY+Q +DEE LD V VLLPRL+DKV VR QAV ALRPFQFGLE ++E+ L++D+VR L+ AM SDS P VRQAALAAVTKTVG+ DQ V+SKLL P Q +TLVKRGLSD AV DACRFM+C WF+D YDP+ELL+R++V V++++VPE++ EIVRLGLRA RERGDPSLGMG TL DAK LR AA RRV++ + S EEAL+ARVQAEVVKDDK MSA EKETRLE IL +T +LC QI V +E+ +L+ DV D + R+E VFVL+Q DV+M +H VES+M ALAAAH SEADFVR+VAELVSDI DL+H+R D S N SL+ASF S + G G+V + + S +RAAIP+N VK+RARAIEGI+ M
Sbjct: 13 ASLFDRTVEFLLLYSGAADKAVRFRCCQLLGALTTEYTQRPQVDEEDLDCFVDVLLPRLRDKVAAVRVQAVGALRPFQFGLEAGDDED--ALKDDKVRSELMRAMVSDSSPDVRQAALAAVTKTVGMFDQ--------------------------VSSKLLSPQQRVTLVKRGLSDSSEAVVDACRFMVCVHWFRDAEYDPMELLQRLDV-----VNVEKVPELVVAEIVRLGLRADRERGDPSLGMGLTLHDAKALRQAAARRVNLTSXXXXXXXXXXXXXXXX-----------TSAEEALYARVQAEVVKDDKVMSAGEKETRLETILTDTMTLCGQIEVVAQEVKELVSK-----------DVGDN-DARVEYQVFVLEQ----------------------------DVDMLHHTVESSMVALAAAHTSEADFVRIVAELVSDISDLIHTRPTNDVSPQ---NVSLNASFASIMEG---LGDVGDGTPNRSFASMRSAVRAAIPKNFVKDRARAIEGIAPM 449
BLAST of mRNA_H-elongata_contig1069.567.1 vs. uniprot
Match: A0A835YU77_9STRA (Nuclear condensing complex subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU77_9STRA) HSP 1 Score: 226 bits (575), Expect = 1.110e-59 Identity = 190/562 (33.81%), Postives = 268/562 (47.69%), Query Frame = 1
Query: 13 RRLFTEAQRTVQCHLRCSDTLRRLLSKHEDTAWDEFFECVTRILVSGTRRSPDVERLVQFVALAA---GG--GSATLLERTVGFLLSNSGAADKGVRFRCCQLLGRFTTEYSQISGMDEEHLDRVVRVLLPRLQDKVWRVREQAVVALRPFQFGLEEDEEEEEALLQEDRVRVGLITAMTSDSQPHVRQAALAAVTKTVGIIDQASSLILRTQDVDERVRKAAFRTLGEDVASKLLQPHQMLTLVKR-------------------GLSDK-PAVADACRFMLCARWFKDVGYDPVELLKRVNVLQLEYVHIQEVPEMLAREIVRLGLRASRERGDPSL---GMGFTLPDAKGLRNAAGRRVHVGAALPSPSSKAADGEEISGNALVADGGGRLSPEEALFARVQAEVVKDDKEMSAVEKETRLEAILPNTTSLCEQIAVKLRELTKLLEGVTGQLEEEQEADVADELETRIEGDVFVLQQLLKIAAHVDFSEEAGRRRLVNLLQGLLVDVNMTYHLVESTMNALAAAHPSEADFVRVVAELVSDIWDLVHSRQAGDTSQNA 1614
R+LF +AQR+ H RC+ LRR LS E F C+ R+L +R P ERLV F+A AA GG G L + FL+S +GA D+ R R C + + + E+ V + R+ DKV VR A AL Q+ L+ A +D+ VR+AA+ ++ + ++ ++ RT+D E VR+ A++ L + L Q + LV GL D+ PAV ACR M+C W + G V LL ++V+Q E + E + + ++ GL A R R D +L G+G + DA LRN A RV+ A+G L+PE ALFARVQAEVV D +SA ++E RL ILP T LC +E V Q D L+ + G +F+LQQ+LK+A VDFSEEAGR RLV LL+ LL+D LVE M ALA+A+PS+ +FVRVVAEL+SD+ + + ++ + S +A
Sbjct: 39 RKLFADAQRSTANHTRCAAALRRALSARPALT-TELFACIDRVLTV-FKREPAAERLVAFIARAACLPGGDEGDVELAAFVLEFLVSRAGAPDRAARLRACHITAAVLEGLGADADIAEDLWQAVTAAMAARVSDKVPAVRAAACAALLRLQYA---------EAAGGCAATAALLRAARADASKDVRKAAMQSLQISKAVLPD---IMRRTRDTSEDVRRTAYQVLADKAPLVYLTLPQRVALVXXXXXXXXXXXXXXXXXXVEWGLKDRSPAVVAACRGMVCRTWLRGAG-GAVPLLGLLDVIQFE-----DAAESVLKTLLETGLAAERGRSDAALSALGLGLSQEDAAALRNVAATRVNF-----------------------AEG---LTPESALFARVQAEVVTADAALSAADREERLGTILPETPHLCA-----------FVEAVAQQ----------DGLQESL-GQLFILQQMLKMARMVDFSEEAGRHRLVTLLRALLLDPFSPSDLVEVAMRALASANPSKGEFVRVVAELISDLSESPNESESLNDSDDA 532
BLAST of mRNA_H-elongata_contig1069.567.1 vs. uniprot
Match: A0A061RNI3_9CHLO (Condensin complex subunit 3 n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RNI3_9CHLO) HSP 1 Score: 116 bits (291), Expect = 1.880e-23 Identity = 94/321 (29.28%), Postives = 155/321 (48.29%), Query Frame = 1
Query: 10 VRRLFTEAQRTVQCHLRCSDTLRRLLSKHEDTAWDEFFECVTRILVSGTRRSPDV--ERLVQFVALAAG-------GGSATLLERTVGFLLSNSGAADKGVRFRCCQLLGRFTTEYSQISGMDEEHLDRVVRVLLPRLQDKVWRVREQAVVALRPFQFGLEEDEEEEEALLQEDRVRVGLITAMTSDSQPHVRQAALAAVTKTVGIIDQASSLILRTQDVDERVRKAAFRTLGEDVASKLLQPHQMLTLVKRGLSDKPAVADACRFMLCARWF-KDVGYDPVELLKRVNVLQLEYVHIQEVPEMLAREIVRLGLRASRERG 942
+RR+ + R CS L L ++ D + F C+ IL+ R D+ ER++ F+ L A G E + +LL AADKGVR+RCCQL+ + + EE +R+ +L R +DKV +VR QA+ AL + E+ L D V ++ A+ SD VR++ +AA++ ++ ++I RT+DV+E VR+A F +GE + L L+ GL D+ + + A W +D G + +ELL+ V V E V ++ + ++A E +R + AS+++G
Sbjct: 14 LRRILNDCVRNPAARKACSKALWTLQAESGDELLKQLFSCLNHILL---RFKGDIIAERVINFMVLFATNPPKGREGECNVFTETLLEYLLELCPAADKGVRYRCCQLVAGIFNNLPVDAEVTEELAERLQWAMLQRAKDKVPQVRVQAIRALSRLA------DPGEDGLFLGDPVTDAMLQALESDKNKDVRKSVIAAISLCPRTLE---AVIERTKDVNEEVRRAVFLVIGEKIPLSELSAANRARLITNGLKDRHSAVARSASSMVATWLTRDCGGNVLELLRMVGVTDNEDVAVEAIHSLIASEHIR-PVAASKDQG 321
BLAST of mRNA_H-elongata_contig1069.567.1 vs. uniprot
Match: UPI001E1DD966 (condensin complex subunit 3-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DD966) HSP 1 Score: 115 bits (288), Expect = 5.830e-23 Identity = 92/307 (29.97%), Postives = 148/307 (48.21%), Query Frame = 1
Query: 7 TVRRLFTEAQRTVQCHLRCSDTLRRLLSKHEDTA-WDEFFECVTRILVSGTRRSPDVERLVQFVALAA----------GG---GSATLLERT-----------VGFLLSNSGAADKGVRFRCCQLLGRFTTEYSQISGMDEEHLDRVVRVLLPRLQDKVWRVREQAVVALRPFQFGLEEDEEEEEALLQEDRVRVGLITAMTSDSQPHVRQAALAAVTKTVGIIDQASSLILRTQDVDERVRKAAFRTLGEDVASKLLQPHQMLTLVKRGLSDKPA-VADACRFMLCARWFKDVGYDPVELLKRVNV 849
+V+ +F + Q +Q H + TL ++ K E A W EF + ++ +R P VER++ FVA A GG G TLL+ FLL++ A ++GVRFRCCQL+ + T + + +D++ DR+ +L RL+DK VR AV+A+ Q +E+ V + + D VR+A ++++ + + +S+I RT+DV + VRK A+ L E + K L L L+ GL D+ V AC L W + VG + ++LLK ++V
Sbjct: 6 SVKDVFVQCQTGLQGHGKLMKTLHKIYDKTEFEAFWSEFQHYLKYAMIV-FKREPAVERMIDFVAKFAPTLCKKVSEKGGDQEGDDTLLDEDSVADNRLLQEMFDFLLTSHSARERGVRFRCCQLINKLLTNLGEDAQIDDDLYDRLYECMLERLKDKCPMVRYHAVLAMARLQDPADEN----------CPVIKAYLFLLNCDPNADVRRAVMSSIAPSTKTL---ASIIGRTRDVKDTVRKTAYEVLAEKIHIKALSIASRLQLINEGLKDRSEMVRQACSSKLLQAWMRTVGGNIIDLLKSLDV 298
BLAST of mRNA_H-elongata_contig1069.567.1 vs. uniprot
Match: V3ZUE7_LOTGI (Uncharacterized protein n=1 Tax=Lottia gigantea TaxID=225164 RepID=V3ZUE7_LOTGI) HSP 1 Score: 113 bits (283), Expect = 1.720e-22 Identity = 87/308 (28.25%), Postives = 150/308 (48.70%), Query Frame = 1
Query: 7 TVRRLFTEAQRTVQCHLRCSDTLRRLLSKHE-DTAWDEFFECVTRILVSGTRRSPDVERLVQFVAL----------AAGGGSAT-----------LLERTVGFLLSNSGAADKGVRFRCCQLLGRFTTEYSQISGMDEEHLDRVVRVLLPRLQDKVWRVREQAVVALRPFQFGLEEDEEEEEALLQEDRVRVGLITAMTSDSQPHVRQAALAAVTKTVGIIDQASSLILRTQDVDERVRKAAFRTLGEDVASKLLQPHQMLTLVKRGLSDKPA-VADACRFMLCARWFKDVGYDPVELLKRVNVLQLE 861
T++ +F + Q+ +Q H + +R + S E D+ W EF + +V +R VER ++F+ ++ G + T LL +T FLL A D+GVRFRCCQ++ + SQ + +D+E DR+ +L R++DK+ VR+ +V+A+ Q +++ V + M+ D P VR+A L + + + + ++ RT+DV+E VR+ A+ L E + K L Q L L+ GL+D+ A V D C + W + + ++LLK ++V E
Sbjct: 5 TMKDIFNQCQKGLQHHNKMLKVMRTMYSMMEFDSFWKEFLHLMKFSMVV-YKREAAVERTIEFICKFVSAPDIPKPSSQGNNETVVDEDDIEDNPLLIKTFEFLLDYHSACDRGVRFRCCQMINKLLNNLSQDAQIDDELYDRIYSCMLERMRDKIHVVRKHSVLAISRLQDPTDDN----------CPVIKAYLYLMSCDPNPDVRRAVLGVIAPSTRTL---AHILERTRDVNESVRQVAYCVLAEKIHIKSLTIAQRLQLLHEGLNDRAASVRDICSKKVLQAWLRSFSGNILDLLKSLDVNSTE 298
BLAST of mRNA_H-elongata_contig1069.567.1 vs. uniprot
Match: A0A1C7MMK1_GRIFR (Condensin complex subunit 3 n=1 Tax=Grifola frondosa TaxID=5627 RepID=A0A1C7MMK1_GRIFR) HSP 1 Score: 108 bits (270), Expect = 7.780e-21 Identity = 133/472 (28.18%), Postives = 203/472 (43.01%), Query Frame = 1
Query: 229 LERTVGFLLSNSGAADKGVRFRCCQLLGRFTTEYSQISGMDEEHLDRVVRVLLPRLQDKVWRVREQAVVALRPFQFGLEEDEEEEEALLQEDRVRVGLITAMTSDSQPHVRQAALAAVTKTVGIIDQASSLILRTQDVDERVRKAAFRTLGEDVAS------------KLLQPHQMLTLVKRGLSDKPAVADACRFMLCARWFKDVGYDPVELLKRVNVLQLEYVHIQEVPEMLAREIVRLGLRASRERGDPSLGMGFTLPDAKGLRNAAGRRVHVGAALPSPSSKAADGEEISGNALVADGGGRLSPEEALFARVQAEVVKDDKEMSAVEKETRLEAILPNTTSLCEQIAVKLRELTKLLEGVTGQLEEE---QEADVADEL---------ETRIEGDVFVLQQLLKIAAHVDFSEEAGRRRLVNLLQGLLVDVNMTYHLVESTMNALAAAHPSEADFVRVVAELVSDIWD 1572
L R + FLL A DK VRFR Q + + +I DE+ + L+ RL+DK VR AVVAL F E E EE E + LI MT D+ P VR+AAL + + S+ + RT+DVD +R+ + + ED + + L Q +V+ GL D+ A L W P E + Q ++LA I L L G T+P+ L RV+V L + G+ A L+PE A ARV E + E RLEA LP T+L +I EL + +E + EEE +E V DE + R++ + FV+ ++LK+A ++D+++E GRR++ L++G++ + +L+ ++ L P+E D +RVV E+V ++ D
Sbjct: 127 LSRIINFLLKGCVAKDKVVRFRVVQCIADMISHLGEI---DEDLYTSLRSSLMERLRDKEAMVRVHAVVALSKLSFSEEPSELEEG----ESSILDTLIDTMTYDTSPDVRRAALLNLRPVPLTL---SAFLARTRDVDPTIRRLVYSAVLEDKCTEGDGERMGCTHPRALTIAQRELIVRNGLGDREEAVRAAAGRLLGTWVDVARAAPDEAKEEGEKEQ----------DVLADVIAFLRLFDLAAEG--------TIPE-DALLEVFKTRVNVFDGL------------VFGDEYWAG----LTPERAFLARVFVE------HCVTLNDEGRLEAALPVVTALAFRIQEAYNELVEKME----EQEEEAMLREGMVMDEXXXXXRARKEDERLDKE-FVIGEILKLAVNLDYADEIGRRKMFQLVRGMISQDVLPENLLARCLDVLRKLSPNERDLIRVVVEVVHELRD 542
BLAST of mRNA_H-elongata_contig1069.567.1 vs. uniprot
Match: B8BQW8_THAPS (Cnd3 domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BQW8_THAPS) HSP 1 Score: 105 bits (261), Expect = 9.620e-20 Identity = 104/403 (25.81%), Postives = 189/403 (46.90%), Query Frame = 1
Query: 376 RVLLPRLQDKVWRVREQAVVALRPFQF--GLEEDEEEEEALLQEDRVRVGLITAMTSDSQPHVRQAALAAVTKTVGIIDQASSLILRTQDVDERVRKAAFRTLGEDVASKLLQPHQMLTLVKRGLSDKPAVADACRF-MLCARWFKDVGYDPVELLKRVNVLQLEYVHIQEVPEMLAREIVRLGLRASRERGDPSLGMGFTLPDAKGLRNAAGRRVHVGAALPSPSSKAADGEEISGNALVA-DGGGRLSPEEALFARVQAEVVKDDKEMSAVEKETRLEAILPNTTSLCEQIAVKLRELTKLLEGVTGQLEEEQEADVADELETRIEGDVFVLQQLLKIAAHVDFSEEAGRRRLVNLLQGLLVDVNMTYHLVESTMNALAAAHPSEADFVRVVAELVSDIWD 1572
+ +LPRL DK+ +VR A+ A F G + E + D ++ L+ +++DS R A + + I+ I R +DVD +VR++A L E+V+ L M+ +++ GL+ + A A +LC W K+V +DP+ LL R+N + E V E AR ++ + AS D + MG L +RN G +P ++ + + +V + +++P ALF RV+ + + M + K + I+ + +LC + L KL+ ++E + D A E + F+ L+ +A + EE RR +++++ +L + LV++ + A+AAAH +EA FV+ ++E++ D+ D
Sbjct: 209 KAILPRLTDKIAKVRSAAIAASSTFFLPSGAKFIETSPDYAKLTDSIQSTLLWLISNDSSASNRALATTCIPTSEESIEY---WIERVKDVDGKVRESALDVLRENVSEGNLSEDSMVEILRTGLTKRCASTHAKTVELLCCNWMKNVKFDPIALLDRLNPVINE-----TVCETTARVLINV---ASALDCDTTDDMGIEL-----VRNNFG----------APEIRSFQQQVLKKMGIVQKEKDAQMTPSMALFLRVKCAMTVESTTMPSSAKADTISDIITDIPTLCNLLNAHL---DKLIAFNNRDEDDEMDEDEAIAFE---DDQNFICLHLIHMAKASELEEEGSRRHFISIMRSMLSRLETPDDLVDACVKAMAAAHDTEAQFVQTISEVLVDVED 579
BLAST of mRNA_H-elongata_contig1069.567.1 vs. uniprot
Match: A0A5C2RV93_9APHY (ARM repeat-containing protein n=2 Tax=Lentinus tigrinus TaxID=5365 RepID=A0A5C2RV93_9APHY) HSP 1 Score: 102 bits (255), Expect = 5.400e-19 Identity = 136/535 (25.42%), Postives = 227/535 (42.43%), Query Frame = 1
Query: 217 SATLLERTVGFLLSNSGAADKGVRFRCCQLLGRFTTEYSQISGMDEEHLDRVVRVLLPRLQDKVWRVREQAVVALRPFQF--GLEEDEEEEEALLQEDRVRVGLITAMTSDSQPHVRQAALAAVTKTVGIIDQASSLILRTQDVDERVRKAAFRTLGE------DVAS---------KLLQPHQMLTLVKRGLSDKPAVADACRFMLCARWFKDV---GYDPVELLKRVNVLQLEYVHIQEVPEMLAREIVR-LGLRASRERGDPSLGMGFTLPDAKGLRNAAGRRVHVGAALPSPSSKAADGEEISGNALVADGGGRLSPEEALFARVQAE--VVKDDKEMSAVEKETRLEAILPNTTSLCEQIAVKLRELTKLLEGVTG-----QLEEEQEADVADELETRIEGDVFVLQQLLKIAAHVDFSEEAGRRRLVNLLQGLLVDVNMTYHLVESTMNALAAAHPSEADFVRVVAELVSDIWDLVHSRQAGDTSQNASVNTSLDASFVSALNGDNGRGNVANTPEPVDPVVIESGIRA 1737
S L + FLL A DK VRFR CQ + + I DE+ R+ LL RL+DK +R QA AL F L+E +E++ +L+ ++ A+ D+ P VR+A + + I+ ++ R++DVD +RK + ++ E D AS K L Q +V+ GL D+ A A L W V G + R NV + EV E +++ LGL L G DA L + R+ + L P ++ L+PE A AR + V K+D+ ++++ LP TT++ +I L + + + +E++EA A E + R++ ++ + +LLK+ ++D+ +E GRR++ L++G+L + L+++ ++ L P E D +RVV E+V ++ D V D + V D S L + + P+PV + E RA
Sbjct: 123 SERFLSYLLNFLLDGCNAKDKIVRFRVCQCIADTIVHFGSI---DEDLYARLRATLLDRLRDKEATIRTQAAAALSKLSFTEDLDELDEDDTPILEV------VLDALAYDTSPDVRKAIIQNLPPGPAILPP---ILERSRDVDGGIRKLVYSSILEKFCLPPDEASTGTIGFTHPKALSIAQREMIVRNGLGDREASVKAAAAQLLGHWVDVVRNDGSKKEDRDARGNVKK-------EVSEETIEDLLAFLGLF--------DLAEGKVADDA--LSSVFETRIDIYEHLEFPEEYWSE----------------LTPERAFLARAFIDKCVAKNDR--------NKVDSTLPVTTAMAFRIQDAYNALVQQIHDDEALMQDPEADEDEEAHAARE-DARLDRELTI-GELLKLGVNLDYGDEIGRRKMTQLVRGMLAQDVLPEPLLQNALDVLRVLTPDEKDLIRVVVEVVHELRDPVDE----DGEEKGDVTADPDESMTE-LGSPKKQPRIPQPPKPVSEMTPEEKARA 597
BLAST of mRNA_H-elongata_contig1069.567.1 vs. uniprot
Match: UPI001EAF5E95 (condensin complex subunit 3-like n=1 Tax=Oncorhynchus gorbuscha TaxID=8017 RepID=UPI001EAF5E95) HSP 1 Score: 100 bits (248), Expect = 2.740e-18 Identity = 133/565 (23.54%), Postives = 235/565 (41.59%), Query Frame = 1
Query: 10 VRRLFTEAQRTVQCHLRCSDTLRRLLSKHEDTAW--DEFFECVTRILVSGTRRSPDVERLVQFVAL--------AAGGGSAT----------LLERTVGFLLSNSGAADKGVRFRCCQLLGRFTTEYSQISGMDEEHLDRVVRVLLPRLQDKVWRVREQAVVALRPFQFGLEEDEEEEEALLQEDRVRVGLITAMTSDSQPHVRQAALAAVTKTVGIIDQASSLILRTQDVDERVRKAAFRTLGEDVASKLLQPHQMLTLVKRGLSDKP-AVADACRFMLCARWFKDVGYDPVELLKRVNVLQLEYVHIQEVPEMLAREIVRLGLRASRERGDPSLGMGFTLPDAKGLRNAAGRRVHVGAALPSPSSKAADGEEISGNALVADGGGRLSPEEALFARVQAEVVKDDKEMSAVEKETRLEAILPNTTSLCEQI----------AVKLRELTKLLEGVTGQLEEEQEADVADELETRIEGDVFVLQQLLKIAAHVDFSEEAGRRRLVNLLQGLLVDVNMTYHLVESTMNALAAAHPSEADFVRVVAELVSDIWDLVHSRQAGDTSQN 1611
++ F AQ+ + +L+ +K ED +EF + + ++ +R P VE +++FV+ +A G L FLL + A VRFR CQL+ + ++ + +D++ D + + +L R+ DK VR QA +A+ Q E Q V L+ + +DS P VR+A L+ + + + + ++ RT+DV E VRK A++ L + V + L Q ++L+++GL D +V + + L W + D +ELL +++V + + + P + L + R+ + + P+ G LS E L+ R E VK + E E LE +LP + E + + R + L EEQ+ D A +LE + + F+ QQL+ + +D +EE GR+R+V +LQ +LV LV L P + ++ VAE++S++ + + RQ D ++N
Sbjct: 9 IKEAFQRAQKGHNNKAKLVASLKNTYNKLEDKTLFHEEFIQYLKHAMIV-YKREPAVENVIEFVSKFSTSFHTPSAEGXXXXXXXXXXXXNPFLSYMFNFLLESHKANSHAVRFRVCQLINKLLGNMAENAQIDDDLFDGIHQAMLVRVTDKFPNVRIQASLAMARLQ---------EPQNHQCPTVNAYLLI-LENDSNPEVRRAVLSCIAPSSLTLPK---ILKRTRDVKESVRKLAYQVLSDKVHIRALSIAQRVSLLQQGLHDAAESVREVVQVRLLPAWLNLLQGDVLELLHKLDVENCSQTALDTLTALFTHT-----------------------PQDQLLHH----RLQLDDRMLVPA-------------------GSLSCESVLYWRALCEFVKTKGD----EGEEMLEKLLPEAATFAEYLYGYVKGLPVLSANQRNIATRYVKCVPVLSEEQKGDFA-QLELVMTKE-FISQQLIHLTGCLDTNEEGGRKRVVAVLQEMLVLPQTPPSLVSLLTEKLLTLIPDDHRRIQTVAEVISEVREPIVIRQPLDENEN 507 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1069.567.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig1069.567.1 >prot_H-elongata_contig1069.567.1 ID=prot_H-elongata_contig1069.567.1|Name=mRNA_H-elongata_contig1069.567.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=599bp CQTVRRLFTEAQRTVQCHLRCSDTLRRLLSKHEDTAWDEFFECVTRILVSback to top mRNA from alignment at H-elongata_contig1069:438..7630- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig1069.567.1 ID=mRNA_H-elongata_contig1069.567.1|Name=mRNA_H-elongata_contig1069.567.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=7193bp|location=Sequence derived from alignment at H-elongata_contig1069:438..7630- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig1069:438..7630- >mRNA_H-elongata_contig1069.567.1 ID=mRNA_H-elongata_contig1069.567.1|Name=mRNA_H-elongata_contig1069.567.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3594bp|location=Sequence derived from alignment at H-elongata_contig1069:438..7630- (Himanthalia elongata Himel1 dioecious)back to top |