prot_H-elongata_contig1069.567.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig1069.567.1
Unique Nameprot_H-elongata_contig1069.567.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length599
Homology
BLAST of mRNA_H-elongata_contig1069.567.1 vs. uniprot
Match: D7FVL8_ECTSI (Cnd3 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVL8_ECTSI)

HSP 1 Score: 486 bits (1252), Expect = 1.490e-155
Identity = 308/600 (51.33%), Postives = 370/600 (61.67%), Query Frame = 0
Query:    2 QTVRRLFTEAQRTVQCHLRCSDTLRRLLSKHEDTAWDEFFECVTRILVSGTRRSPDVERLVQFVALAAGGG-SATLLERTVGFLLSNSGAADKGVRFRCCQLLGRFTTEYSQISGMDEEHLDRVVRVLLPRLQDKVWRVREQAVVALRPFQFGLEEDEEEEEALLQEDRVRVGLITAMTSDSQPHVRQAALAAVTKTVGIIDQASSLILRTQDVDERVRKAAFRTLGEDVASKLLQPHQMLTLVKRGLSDKP-AVADACRFMLCARWFKDVGYDPVELLKRVNVLQLEYVHIQEVPEMLAREIVRLGLRASRERGDPSLGMGFTLPDAKGLRNAAGRRVHVGAALPSPSSKAADGEEISGNALVADGGGRLSPEEALFARVQAEVVKDDKEMSAVEKETRLEAILPNTTSLCEQIAVKLRELTKLLEGVTGQLEEEQEADVADELETRIEGDVFVLQQLLKIAAHVDFSEEAGRRRLVNLLQGLLVDVNMTYHLVESTMNALAAAHPSEADFVRVVAELVSDIWDLVHSRQAGDTSQNASVNTSLDASFVSALNGDNGRGNVANTPEPVDPVVIESGIRAAIPRNIVKERARAIEGISSM 599
            Q VR+LF EAQRTVQCH RCSD+L RLLSKHE +AWDE+F C+TRILV  ++R P VERLV FV+LAAG   +A+L +RTV FLL +SGAADK VRFRCCQLLG  TTEY+Q   +DEE LD  V VLLPRL+DKV  VR QAV ALRPFQFGLE  ++E+   L++D+VR  L+ AM SDS P VRQAALAAVTKTVG+ DQ   L+LRTQDV E VR+AAFRTLGEDV+SKLL P Q +TLVKRGLSD   AV DACRFM+C  WF+D  YDP+ELL+R+NV+ +E                                                                                                       MSA EKETRLE IL +T +LC QI V  +E+ +L+             DV D  + R+E  VFVL+QLLK+A H DF+EEAGRRRLV LLQ LL+DV+M +H VES+M ALAAAH SEADFVR+VAELVSDI DL+H+R   D S   + N SL+ASF S + G    G+V +         + S +RAAIP+N VK+RARAIEGI+ M
Sbjct:   26 QAVRKLFVEAQRTVQCHQRCSDSLPRLLSKHE-SAWDEYFSCLTRILVV-SKRDPGVERLVHFVSLAAGSDVNASLFDRTVEFLLLHSGAADKAVRFRCCQLLGTLTTEYTQRPQVDEEDLDCFVDVLLPRLRDKVAAVRVQAVGALRPFQFGLEAGDDED--ALKDDKVRSELVRAMVSDSSPDVRQAALAAVTKTVGMFDQ---LVLRTQDVKESVRRAAFRTLGEDVSSKLLSPQQRVTLVKRGLSDSSEAVVDACRFMVCVHWFRDAEYDPMELLQRLNVVNVEV------------------------------------------------------------------------------------------------------MSAGEKETRLETILTDTMTLCGQIEVVAQEVKELVSK-----------DVGDN-DARVEYQVFVLEQLLKLATHADFTEEAGRRRLVTLLQDLLLDVDMLHHTVESSMVALAAAHTSEADFVRIVAELVSDISDLIHTRPTNDVS---TQNVSLNASFASIMEG---LGDVGDGTPNRSFASMRSAVRAAIPKNFVKDRARAIEGIAPM 498          
BLAST of mRNA_H-elongata_contig1069.567.1 vs. uniprot
Match: A0A6H5L8W1_9PHAE (Cnd3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8W1_9PHAE)

HSP 1 Score: 410 bits (1054), Expect = 4.830e-127
Identity = 269/527 (51.04%), Postives = 324/527 (61.48%), Query Frame = 0
Query:   74 ATLLERTVGFLLSNSGAADKGVRFRCCQLLGRFTTEYSQISGMDEEHLDRVVRVLLPRLQDKVWRVREQAVVALRPFQFGLEEDEEEEEALLQEDRVRVGLITAMTSDSQPHVRQAALAAVTKTVGIIDQASSLILRTQDVDERVRKAAFRTLGEDVASKLLQPHQMLTLVKRGLSDKP-AVADACRFMLCARWFKDVGYDPVELLKRVNVLQLEYVHIQEVPEMLAREIVRLGLRASRERGDPSLGMGFTLPDAKGLRNAAGRRVHVGAALPSPSSKAADGEEISGNALVADGGGRLSPEEALFARVQAEVVKDDKEMSAVEKETRLEAILPNTTSLCEQIAVKLRELTKLLEGVTGQLEEEQEADVADELETRIEGDVFVLQQLLKIAAHVDFSEEAGRRRLVNLLQGLLVDVNMTYHLVESTMNALAAAHPSEADFVRVVAELVSDIWDLVHSRQAGDTSQNASVNTSLDASFVSALNGDNGRGNVANTPEPVDPVVIESGIRAAIPRNIVKERARAIEGISSM 599
            A+L +RTV FLL  SGAADK VRFRCCQLLG  TTEY+Q   +DEE LD  V VLLPRL+DKV  VR QAV ALRPFQFGLE  ++E+   L++D+VR  L+ AM SDS P VRQAALAAVTKTVG+ DQ                          V+SKLL P Q +TLVKRGLSD   AV DACRFM+C  WF+D  YDP+ELL+R++V     V++++VPE++  EIVRLGLRA RERGDPSLGMG TL DAK LR AA RRV++ +                            S EEAL+ARVQAEVVKDDK MSA EKETRLE IL +T +LC QI V  +E+ +L+             DV D  + R+E  VFVL+Q                            DV+M +H VES+M ALAAAH SEADFVR+VAELVSDI DL+H+R   D S     N SL+ASF S + G    G+V +         + S +RAAIP+N VK+RARAIEGI+ M
Sbjct:   13 ASLFDRTVEFLLLYSGAADKAVRFRCCQLLGALTTEYTQRPQVDEEDLDCFVDVLLPRLRDKVAAVRVQAVGALRPFQFGLEAGDDED--ALKDDKVRSELMRAMVSDSSPDVRQAALAAVTKTVGMFDQ--------------------------VSSKLLSPQQRVTLVKRGLSDSSEAVVDACRFMVCVHWFRDAEYDPMELLQRLDV-----VNVEKVPELVVAEIVRLGLRADRERGDPSLGMGLTLHDAKALRQAAARRVNLTSXXXXXXXXXXXXXXXX-----------TSAEEALYARVQAEVVKDDKVMSAGEKETRLETILTDTMTLCGQIEVVAQEVKELVSK-----------DVGDN-DARVEYQVFVLEQ----------------------------DVDMLHHTVESSMVALAAAHTSEADFVRIVAELVSDISDLIHTRPTNDVSPQ---NVSLNASFASIMEG---LGDVGDGTPNRSFASMRSAVRAAIPKNFVKDRARAIEGIAPM 449          
BLAST of mRNA_H-elongata_contig1069.567.1 vs. uniprot
Match: A0A835YU77_9STRA (Nuclear condensing complex subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU77_9STRA)

HSP 1 Score: 226 bits (575), Expect = 1.110e-59
Identity = 190/562 (33.81%), Postives = 268/562 (47.69%), Query Frame = 0
Query:    5 RRLFTEAQRTVQCHLRCSDTLRRLLSKHEDTAWDEFFECVTRILVSGTRRSPDVERLVQFVALAA---GG--GSATLLERTVGFLLSNSGAADKGVRFRCCQLLGRFTTEYSQISGMDEEHLDRVVRVLLPRLQDKVWRVREQAVVALRPFQFGLEEDEEEEEALLQEDRVRVGLITAMTSDSQPHVRQAALAAVTKTVGIIDQASSLILRTQDVDERVRKAAFRTLGEDVASKLLQPHQMLTLVKR-------------------GLSDK-PAVADACRFMLCARWFKDVGYDPVELLKRVNVLQLEYVHIQEVPEMLAREIVRLGLRASRERGDPSL---GMGFTLPDAKGLRNAAGRRVHVGAALPSPSSKAADGEEISGNALVADGGGRLSPEEALFARVQAEVVKDDKEMSAVEKETRLEAILPNTTSLCEQIAVKLRELTKLLEGVTGQLEEEQEADVADELETRIEGDVFVLQQLLKIAAHVDFSEEAGRRRLVNLLQGLLVDVNMTYHLVESTMNALAAAHPSEADFVRVVAELVSDIWDLVHSRQAGDTSQNA 538
            R+LF +AQR+   H RC+  LRR LS        E F C+ R+L    +R P  ERLV F+A AA   GG  G   L    + FL+S +GA D+  R R C +           + + E+    V   +  R+ DKV  VR  A  AL   Q+                     L+ A  +D+   VR+AA+ ++  +  ++     ++ RT+D  E VR+ A++ L +      L   Q + LV                     GL D+ PAV  ACR M+C  W +  G   V LL  ++V+Q E     +  E + + ++  GL A R R D +L   G+G +  DA  LRN A  RV+                        A+G   L+PE ALFARVQAEVV  D  +SA ++E RL  ILP T  LC             +E V  Q          D L+  + G +F+LQQ+LK+A  VDFSEEAGR RLV LL+ LL+D      LVE  M ALA+A+PS+ +FVRVVAEL+SD+ +  +  ++ + S +A
Sbjct:   39 RKLFADAQRSTANHTRCAAALRRALSARPALT-TELFACIDRVLTV-FKREPAAERLVAFIARAACLPGGDEGDVELAAFVLEFLVSRAGAPDRAARLRACHITAAVLEGLGADADIAEDLWQAVTAAMAARVSDKVPAVRAAACAALLRLQYA---------EAAGGCAATAALLRAARADASKDVRKAAMQSLQISKAVLPD---IMRRTRDTSEDVRRTAYQVLADKAPLVYLTLPQRVALVXXXXXXXXXXXXXXXXXXVEWGLKDRSPAVVAACRGMVCRTWLRGAG-GAVPLLGLLDVIQFE-----DAAESVLKTLLETGLAAERGRSDAALSALGLGLSQEDAAALRNVAATRVNF-----------------------AEG---LTPESALFARVQAEVVTADAALSAADREERLGTILPETPHLCA-----------FVEAVAQQ----------DGLQESL-GQLFILQQMLKMARMVDFSEEAGRHRLVTLLRALLLDPFSPSDLVEVAMRALASANPSKGEFVRVVAELISDLSESPNESESLNDSDDA 532          
BLAST of mRNA_H-elongata_contig1069.567.1 vs. uniprot
Match: A0A061RNI3_9CHLO (Condensin complex subunit 3 n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RNI3_9CHLO)

HSP 1 Score: 116 bits (291), Expect = 1.880e-23
Identity = 94/321 (29.28%), Postives = 155/321 (48.29%), Query Frame = 0
Query:    4 VRRLFTEAQRTVQCHLRCSDTLRRLLSKHEDTAWDEFFECVTRILVSGTRRSPDV--ERLVQFVALAAG-------GGSATLLERTVGFLLSNSGAADKGVRFRCCQLLGRFTTEYSQISGMDEEHLDRVVRVLLPRLQDKVWRVREQAVVALRPFQFGLEEDEEEEEALLQEDRVRVGLITAMTSDSQPHVRQAALAAVTKTVGIIDQASSLILRTQDVDERVRKAAFRTLGEDVASKLLQPHQMLTLVKRGLSDKPAVADACRFMLCARWF-KDVGYDPVELLKRVNVLQLEYVHIQEVPEMLAREIVRLGLRASRERG 314
            +RR+  +  R       CS  L  L ++  D    + F C+  IL+   R   D+  ER++ F+ L A        G      E  + +LL    AADKGVR+RCCQL+          + + EE  +R+   +L R +DKV +VR QA+ AL          +  E+ L   D V   ++ A+ SD    VR++ +AA++     ++   ++I RT+DV+E VR+A F  +GE +    L       L+  GL D+ +        + A W  +D G + +ELL+ V V   E V ++ +  ++A E +R  + AS+++G
Sbjct:   14 LRRILNDCVRNPAARKACSKALWTLQAESGDELLKQLFSCLNHILL---RFKGDIIAERVINFMVLFATNPPKGREGECNVFTETLLEYLLELCPAADKGVRYRCCQLVAGIFNNLPVDAEVTEELAERLQWAMLQRAKDKVPQVRVQAIRALSRLA------DPGEDGLFLGDPVTDAMLQALESDKNKDVRKSVIAAISLCPRTLE---AVIERTKDVNEEVRRAVFLVIGEKIPLSELSAANRARLITNGLKDRHSAVARSASSMVATWLTRDCGGNVLELLRMVGVTDNEDVAVEAIHSLIASEHIR-PVAASKDQG 321          
BLAST of mRNA_H-elongata_contig1069.567.1 vs. uniprot
Match: UPI001E1DD966 (condensin complex subunit 3-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DD966)

HSP 1 Score: 115 bits (288), Expect = 5.830e-23
Identity = 92/307 (29.97%), Postives = 148/307 (48.21%), Query Frame = 0
Query:    3 TVRRLFTEAQRTVQCHLRCSDTLRRLLSKHEDTA-WDEFFECVTRILVSGTRRSPDVERLVQFVALAA----------GG---GSATLLERT-----------VGFLLSNSGAADKGVRFRCCQLLGRFTTEYSQISGMDEEHLDRVVRVLLPRLQDKVWRVREQAVVALRPFQFGLEEDEEEEEALLQEDRVRVGLITAMTSDSQPHVRQAALAAVTKTVGIIDQASSLILRTQDVDERVRKAAFRTLGEDVASKLLQPHQMLTLVKRGLSDKPA-VADACRFMLCARWFKDVGYDPVELLKRVNV 283
            +V+ +F + Q  +Q H +   TL ++  K E  A W EF   +   ++   +R P VER++ FVA  A          GG   G  TLL+               FLL++  A ++GVRFRCCQL+ +  T   + + +D++  DR+   +L RL+DK   VR  AV+A+   Q   +E+            V    +  +  D    VR+A ++++  +   +   +S+I RT+DV + VRK A+  L E +  K L     L L+  GL D+   V  AC   L   W + VG + ++LLK ++V
Sbjct:    6 SVKDVFVQCQTGLQGHGKLMKTLHKIYDKTEFEAFWSEFQHYLKYAMIV-FKREPAVERMIDFVAKFAPTLCKKVSEKGGDQEGDDTLLDEDSVADNRLLQEMFDFLLTSHSARERGVRFRCCQLINKLLTNLGEDAQIDDDLYDRLYECMLERLKDKCPMVRYHAVLAMARLQDPADEN----------CPVIKAYLFLLNCDPNADVRRAVMSSIAPSTKTL---ASIIGRTRDVKDTVRKTAYEVLAEKIHIKALSIASRLQLINEGLKDRSEMVRQACSSKLLQAWMRTVGGNIIDLLKSLDV 298          
BLAST of mRNA_H-elongata_contig1069.567.1 vs. uniprot
Match: V3ZUE7_LOTGI (Uncharacterized protein n=1 Tax=Lottia gigantea TaxID=225164 RepID=V3ZUE7_LOTGI)

HSP 1 Score: 113 bits (283), Expect = 1.720e-22
Identity = 87/308 (28.25%), Postives = 150/308 (48.70%), Query Frame = 0
Query:    3 TVRRLFTEAQRTVQCHLRCSDTLRRLLSKHE-DTAWDEFFECVTRILVSGTRRSPDVERLVQFVAL----------AAGGGSAT-----------LLERTVGFLLSNSGAADKGVRFRCCQLLGRFTTEYSQISGMDEEHLDRVVRVLLPRLQDKVWRVREQAVVALRPFQFGLEEDEEEEEALLQEDRVRVGLITAMTSDSQPHVRQAALAAVTKTVGIIDQASSLILRTQDVDERVRKAAFRTLGEDVASKLLQPHQMLTLVKRGLSDKPA-VADACRFMLCARWFKDVGYDPVELLKRVNVLQLE 287
            T++ +F + Q+ +Q H +    +R + S  E D+ W EF   +   +V   +R   VER ++F+            ++ G + T           LL +T  FLL    A D+GVRFRCCQ++ +     SQ + +D+E  DR+   +L R++DK+  VR+ +V+A+   Q   +++            V    +  M+ D  P VR+A L  +  +   +   + ++ RT+DV+E VR+ A+  L E +  K L   Q L L+  GL+D+ A V D C   +   W +    + ++LLK ++V   E
Sbjct:    5 TMKDIFNQCQKGLQHHNKMLKVMRTMYSMMEFDSFWKEFLHLMKFSMVV-YKREAAVERTIEFICKFVSAPDIPKPSSQGNNETVVDEDDIEDNPLLIKTFEFLLDYHSACDRGVRFRCCQMINKLLNNLSQDAQIDDELYDRIYSCMLERMRDKIHVVRKHSVLAISRLQDPTDDN----------CPVIKAYLYLMSCDPNPDVRRAVLGVIAPSTRTL---AHILERTRDVNESVRQVAYCVLAEKIHIKSLTIAQRLQLLHEGLNDRAASVRDICSKKVLQAWLRSFSGNILDLLKSLDVNSTE 298          
BLAST of mRNA_H-elongata_contig1069.567.1 vs. uniprot
Match: A0A1C7MMK1_GRIFR (Condensin complex subunit 3 n=1 Tax=Grifola frondosa TaxID=5627 RepID=A0A1C7MMK1_GRIFR)

HSP 1 Score: 108 bits (270), Expect = 7.780e-21
Identity = 133/472 (28.18%), Postives = 203/472 (43.01%), Query Frame = 0
Query:   77 LERTVGFLLSNSGAADKGVRFRCCQLLGRFTTEYSQISGMDEEHLDRVVRVLLPRLQDKVWRVREQAVVALRPFQFGLEEDEEEEEALLQEDRVRVGLITAMTSDSQPHVRQAALAAVTKTVGIIDQASSLILRTQDVDERVRKAAFRTLGEDVAS------------KLLQPHQMLTLVKRGLSDKPAVADACRFMLCARWFKDVGYDPVELLKRVNVLQLEYVHIQEVPEMLAREIVRLGLRASRERGDPSLGMGFTLPDAKGLRNAAGRRVHVGAALPSPSSKAADGEEISGNALVADGGGRLSPEEALFARVQAEVVKDDKEMSAVEKETRLEAILPNTTSLCEQIAVKLRELTKLLEGVTGQLEEE---QEADVADEL---------ETRIEGDVFVLQQLLKIAAHVDFSEEAGRRRLVNLLQGLLVDVNMTYHLVESTMNALAAAHPSEADFVRVVAELVSDIWD 524
            L R + FLL    A DK VRFR  Q +    +   +I   DE+    +   L+ RL+DK   VR  AVVAL    F  E  E EE     E  +   LI  MT D+ P VR+AAL  +      +   S+ + RT+DVD  +R+  +  + ED  +            + L   Q   +V+ GL D+     A    L   W       P E  +     Q          ++LA  I  L L      G        T+P+   L      RV+V   L            + G+   A     L+PE A  ARV  E          +  E RLEA LP  T+L  +I     EL + +E    + EEE   +E  V DE          + R++ + FV+ ++LK+A ++D+++E GRR++  L++G++    +  +L+   ++ L    P+E D +RVV E+V ++ D
Sbjct:  127 LSRIINFLLKGCVAKDKVVRFRVVQCIADMISHLGEI---DEDLYTSLRSSLMERLRDKEAMVRVHAVVALSKLSFSEEPSELEEG----ESSILDTLIDTMTYDTSPDVRRAALLNLRPVPLTL---SAFLARTRDVDPTIRRLVYSAVLEDKCTEGDGERMGCTHPRALTIAQRELIVRNGLGDREEAVRAAAGRLLGTWVDVARAAPDEAKEEGEKEQ----------DVLADVIAFLRLFDLAAEG--------TIPE-DALLEVFKTRVNVFDGL------------VFGDEYWAG----LTPERAFLARVFVE------HCVTLNDEGRLEAALPVVTALAFRIQEAYNELVEKME----EQEEEAMLREGMVMDEXXXXXRARKEDERLDKE-FVIGEILKLAVNLDYADEIGRRKMFQLVRGMISQDVLPENLLARCLDVLRKLSPNERDLIRVVVEVVHELRD 542          
BLAST of mRNA_H-elongata_contig1069.567.1 vs. uniprot
Match: B8BQW8_THAPS (Cnd3 domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BQW8_THAPS)

HSP 1 Score: 105 bits (261), Expect = 9.620e-20
Identity = 104/403 (25.81%), Postives = 189/403 (46.90%), Query Frame = 0
Query:  126 RVLLPRLQDKVWRVREQAVVALRPFQF--GLEEDEEEEEALLQEDRVRVGLITAMTSDSQPHVRQAALAAVTKTVGIIDQASSLILRTQDVDERVRKAAFRTLGEDVASKLLQPHQMLTLVKRGLSDKPAVADACRF-MLCARWFKDVGYDPVELLKRVNVLQLEYVHIQEVPEMLAREIVRLGLRASRERGDPSLGMGFTLPDAKGLRNAAGRRVHVGAALPSPSSKAADGEEISGNALVA-DGGGRLSPEEALFARVQAEVVKDDKEMSAVEKETRLEAILPNTTSLCEQIAVKLRELTKLLEGVTGQLEEEQEADVADELETRIEGDVFVLQQLLKIAAHVDFSEEAGRRRLVNLLQGLLVDVNMTYHLVESTMNALAAAHPSEADFVRVVAELVSDIWD 524
            + +LPRL DK+ +VR  A+ A   F    G +  E   +     D ++  L+  +++DS    R  A   +  +   I+     I R +DVD +VR++A   L E+V+   L    M+ +++ GL+ + A   A    +LC  W K+V +DP+ LL R+N +  E      V E  AR ++ +   AS    D +  MG  L     +RN  G          +P  ++   + +    +V  +   +++P  ALF RV+  +  +   M +  K   +  I+ +  +LC  +   L    KL+       ++E + D A   E   +   F+   L+ +A   +  EE  RR  +++++ +L  +     LV++ + A+AAAH +EA FV+ ++E++ D+ D
Sbjct:  209 KAILPRLTDKIAKVRSAAIAASSTFFLPSGAKFIETSPDYAKLTDSIQSTLLWLISNDSSASNRALATTCIPTSEESIEY---WIERVKDVDGKVRESALDVLRENVSEGNLSEDSMVEILRTGLTKRCASTHAKTVELLCCNWMKNVKFDPIALLDRLNPVINE-----TVCETTARVLINV---ASALDCDTTDDMGIEL-----VRNNFG----------APEIRSFQQQVLKKMGIVQKEKDAQMTPSMALFLRVKCAMTVESTTMPSSAKADTISDIITDIPTLCNLLNAHL---DKLIAFNNRDEDDEMDEDEAIAFE---DDQNFICLHLIHMAKASELEEEGSRRHFISIMRSMLSRLETPDDLVDACVKAMAAAHDTEAQFVQTISEVLVDVED 579          
BLAST of mRNA_H-elongata_contig1069.567.1 vs. uniprot
Match: A0A5C2RV93_9APHY (ARM repeat-containing protein n=2 Tax=Lentinus tigrinus TaxID=5365 RepID=A0A5C2RV93_9APHY)

HSP 1 Score: 102 bits (255), Expect = 5.400e-19
Identity = 136/535 (25.42%), Postives = 227/535 (42.43%), Query Frame = 0
Query:   73 SATLLERTVGFLLSNSGAADKGVRFRCCQLLGRFTTEYSQISGMDEEHLDRVVRVLLPRLQDKVWRVREQAVVALRPFQF--GLEEDEEEEEALLQEDRVRVGLITAMTSDSQPHVRQAALAAVTKTVGIIDQASSLILRTQDVDERVRKAAFRTLGE------DVAS---------KLLQPHQMLTLVKRGLSDKPAVADACRFMLCARWFKDV---GYDPVELLKRVNVLQLEYVHIQEVPEMLAREIVR-LGLRASRERGDPSLGMGFTLPDAKGLRNAAGRRVHVGAALPSPSSKAADGEEISGNALVADGGGRLSPEEALFARVQAE--VVKDDKEMSAVEKETRLEAILPNTTSLCEQIAVKLRELTKLLEGVTG-----QLEEEQEADVADELETRIEGDVFVLQQLLKIAAHVDFSEEAGRRRLVNLLQGLLVDVNMTYHLVESTMNALAAAHPSEADFVRVVAELVSDIWDLVHSRQAGDTSQNASVNTSLDASFVSALNGDNGRGNVANTPEPVDPVVIESGIRA 579
            S   L   + FLL    A DK VRFR CQ +      +  I   DE+   R+   LL RL+DK   +R QA  AL    F   L+E +E++  +L+       ++ A+  D+ P VR+A +  +     I+     ++ R++DVD  +RK  + ++ E      D AS         K L   Q   +V+ GL D+ A   A    L   W   V   G    +   R NV +       EV E    +++  LGL          L  G    DA  L +    R+ +   L  P    ++                L+PE A  AR   +  V K+D+         ++++ LP TT++  +I      L + +          + +E++EA  A E + R++ ++ +  +LLK+  ++D+ +E GRR++  L++G+L    +   L+++ ++ L    P E D +RVV E+V ++ D V      D  +   V    D S    L     +  +   P+PV  +  E   RA
Sbjct:  123 SERFLSYLLNFLLDGCNAKDKIVRFRVCQCIADTIVHFGSI---DEDLYARLRATLLDRLRDKEATIRTQAAAALSKLSFTEDLDELDEDDTPILEV------VLDALAYDTSPDVRKAIIQNLPPGPAILPP---ILERSRDVDGGIRKLVYSSILEKFCLPPDEASTGTIGFTHPKALSIAQREMIVRNGLGDREASVKAAAAQLLGHWVDVVRNDGSKKEDRDARGNVKK-------EVSEETIEDLLAFLGLF--------DLAEGKVADDA--LSSVFETRIDIYEHLEFPEEYWSE----------------LTPERAFLARAFIDKCVAKNDR--------NKVDSTLPVTTAMAFRIQDAYNALVQQIHDDEALMQDPEADEDEEAHAARE-DARLDRELTI-GELLKLGVNLDYGDEIGRRKMTQLVRGMLAQDVLPEPLLQNALDVLRVLTPDEKDLIRVVVEVVHELRDPVDE----DGEEKGDVTADPDESMTE-LGSPKKQPRIPQPPKPVSEMTPEEKARA 597          
BLAST of mRNA_H-elongata_contig1069.567.1 vs. uniprot
Match: UPI001EAF5E95 (condensin complex subunit 3-like n=1 Tax=Oncorhynchus gorbuscha TaxID=8017 RepID=UPI001EAF5E95)

HSP 1 Score: 100 bits (248), Expect = 2.740e-18
Identity = 133/565 (23.54%), Postives = 235/565 (41.59%), Query Frame = 0
Query:    4 VRRLFTEAQRTVQCHLRCSDTLRRLLSKHEDTAW--DEFFECVTRILVSGTRRSPDVERLVQFVAL--------AAGGGSAT----------LLERTVGFLLSNSGAADKGVRFRCCQLLGRFTTEYSQISGMDEEHLDRVVRVLLPRLQDKVWRVREQAVVALRPFQFGLEEDEEEEEALLQEDRVRVGLITAMTSDSQPHVRQAALAAVTKTVGIIDQASSLILRTQDVDERVRKAAFRTLGEDVASKLLQPHQMLTLVKRGLSDKP-AVADACRFMLCARWFKDVGYDPVELLKRVNVLQLEYVHIQEVPEMLAREIVRLGLRASRERGDPSLGMGFTLPDAKGLRNAAGRRVHVGAALPSPSSKAADGEEISGNALVADGGGRLSPEEALFARVQAEVVKDDKEMSAVEKETRLEAILPNTTSLCEQI----------AVKLRELTKLLEGVTGQLEEEQEADVADELETRIEGDVFVLQQLLKIAAHVDFSEEAGRRRLVNLLQGLLVDVNMTYHLVESTMNALAAAHPSEADFVRVVAELVSDIWDLVHSRQAGDTSQN 537
            ++  F  AQ+      +   +L+   +K ED     +EF + +   ++   +R P VE +++FV+         +A G               L     FLL +  A    VRFR CQL+ +     ++ + +D++  D + + +L R+ DK   VR QA +A+   Q         E    Q   V   L+  + +DS P VR+A L+ +  +   + +   ++ RT+DV E VRK A++ L + V  + L   Q ++L+++GL D   +V +  +  L   W   +  D +ELL +++V       +  +  +                           P  + L +    R+ +   +  P+                   G LS E  L+ R   E VK   +    E E  LE +LP   +  E +          +   R +          L EEQ+ D A +LE  +  + F+ QQL+ +   +D +EE GR+R+V +LQ +LV       LV      L    P +   ++ VAE++S++ + +  RQ  D ++N
Sbjct:    9 IKEAFQRAQKGHNNKAKLVASLKNTYNKLEDKTLFHEEFIQYLKHAMIV-YKREPAVENVIEFVSKFSTSFHTPSAEGXXXXXXXXXXXXNPFLSYMFNFLLESHKANSHAVRFRVCQLINKLLGNMAENAQIDDDLFDGIHQAMLVRVTDKFPNVRIQASLAMARLQ---------EPQNHQCPTVNAYLLI-LENDSNPEVRRAVLSCIAPSSLTLPK---ILKRTRDVKESVRKLAYQVLSDKVHIRALSIAQRVSLLQQGLHDAAESVREVVQVRLLPAWLNLLQGDVLELLHKLDVENCSQTALDTLTALFTHT-----------------------PQDQLLHH----RLQLDDRMLVPA-------------------GSLSCESVLYWRALCEFVKTKGD----EGEEMLEKLLPEAATFAEYLYGYVKGLPVLSANQRNIATRYVKCVPVLSEEQKGDFA-QLELVMTKE-FISQQLIHLTGCLDTNEEGGRKRVVAVLQEMLVLPQTPPSLVSLLTEKLLTLIPDDHRRIQTVAEVISEVREPIVIRQPLDENEN 507          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1069.567.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVL8_ECTSI1.490e-15551.33Cnd3 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5L8W1_9PHAE4.830e-12751.04Cnd3 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A835YU77_9STRA1.110e-5933.81Nuclear condensing complex subunit n=1 Tax=Tribone... [more]
A0A061RNI3_9CHLO1.880e-2329.28Condensin complex subunit 3 n=1 Tax=Tetraselmis sp... [more]
UPI001E1DD9665.830e-2329.97condensin complex subunit 3-like n=1 Tax=Mercenari... [more]
V3ZUE7_LOTGI1.720e-2228.25Uncharacterized protein n=1 Tax=Lottia gigantea Ta... [more]
A0A1C7MMK1_GRIFR7.780e-2128.18Condensin complex subunit 3 n=1 Tax=Grifola frondo... [more]
B8BQW8_THAPS9.620e-2025.81Cnd3 domain-containing protein n=1 Tax=Thalassiosi... [more]
A0A5C2RV93_9APHY5.400e-1925.42ARM repeat-containing protein n=2 Tax=Lentinus tig... [more]
UPI001EAF5E952.740e-1823.54condensin complex subunit 3-like n=1 Tax=Oncorhync... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 418..438
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 66..243
e-value: 1.4E-10
score: 42.8
IPR027165Condensin complex subunit 3PANTHERPTHR14418CONDENSIN COMPLEX SUBUNIT 3-RELATEDcoord: 2..531
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 66..232

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig1069contigH-elongata_contig1069:438..7630 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig1069.567.1mRNA_H-elongata_contig1069.567.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig1069 438..7630 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig1069.567.1 ID=prot_H-elongata_contig1069.567.1|Name=mRNA_H-elongata_contig1069.567.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=599bp
CQTVRRLFTEAQRTVQCHLRCSDTLRRLLSKHEDTAWDEFFECVTRILVS
GTRRSPDVERLVQFVALAAGGGSATLLERTVGFLLSNSGAADKGVRFRCC
QLLGRFTTEYSQISGMDEEHLDRVVRVLLPRLQDKVWRVREQAVVALRPF
QFGLEEDEEEEEALLQEDRVRVGLITAMTSDSQPHVRQAALAAVTKTVGI
IDQASSLILRTQDVDERVRKAAFRTLGEDVASKLLQPHQMLTLVKRGLSD
KPAVADACRFMLCARWFKDVGYDPVELLKRVNVLQLEYVHIQEVPEMLAR
EIVRLGLRASRERGDPSLGMGFTLPDAKGLRNAAGRRVHVGAALPSPSSK
AADGEEISGNALVADGGGRLSPEEALFARVQAEVVKDDKEMSAVEKETRL
EAILPNTTSLCEQIAVKLRELTKLLEGVTGQLEEEQEADVADELETRIEG
DVFVLQQLLKIAAHVDFSEEAGRRRLVNLLQGLLVDVNMTYHLVESTMNA
LAAAHPSEADFVRVVAELVSDIWDLVHSRQAGDTSQNASVNTSLDASFVS
ALNGDNGRGNVANTPEPVDPVVIESGIRAAIPRNIVKERARAIEGISSM
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR027165CND3
IPR016024ARM-type_fold