Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | mitochondrion |
| Exons | 1 |
| Model size | 333 |
| Cds size | 330 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622929571.0989165-CDS-H-elongata_contig103610:999..1329 | 1622929571.0989165-CDS-H-elongata_contig103610:999..1329 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig103610 1000..1329 + |
| 1691679075.2011044-CDS-H-elongata_contig103610:999..1329 | 1691679075.2011044-CDS-H-elongata_contig103610:999..1329 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig103610 1000..1329 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig103610.300.1 >prot_H-elongata_contig103610.300.1 ID=prot_H-elongata_contig103610.300.1|Name=mRNA_H-elongata_contig103610.300.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=110bp
ATVLVRVRILPVPTPNAAAPTPPSADRCRRRGPRDFSMGSLFSEFSAAEA
AIFFAALAARAMLIRLADGEGPSSRRTASRGGCRSLASTVGDPLGECKRG
AEAAASFFDS back to topmRNA from alignment at H-elongata_contig103610:1000..1331+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-elongata_contig103610.300.1 ID=mRNA_H-elongata_contig103610.300.1|Name=mRNA_H-elongata_contig103610.300.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=332bp|location=Sequence derived from alignment at H-elongata_contig103610:1000..1331+ (Himanthalia elongata Himel1 dioecious)
GCAACAGTGCTCGTCCGTGTCCGGATCCTCCCCGTCCCCACCCCCAATGC
CGCCGCTCCAACTCCACCTTCAGCTGACCGCTGCCGTCGCCGGGGGCCTC
GCGATTTTTCGATGGGTTCATTGTTCTCGGAGTTTAGCGCCGCGGAGGCA
GCCATTTTCTTTGCAGCACTGGCGGCGCGGGCGATGCTGATCCGCCTTGC
CGACGGAGAAGGGCCATCGTCGAGAAGAACGGCGTCGCGGGGCGGTTGCC
GGTCCTTGGCATCTACTGTCGGTGATCCGTTGGGCGAATGCAAGCGCGGC
GCCGAAGCAGCAGCATCATTTTTTGACAGCTC back to topCoding sequence (CDS) from alignment at H-elongata_contig103610:1000..1331+ >mRNA_H-elongata_contig103610.300.1 ID=mRNA_H-elongata_contig103610.300.1|Name=mRNA_H-elongata_contig103610.300.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=660bp|location=Sequence derived from alignment at H-elongata_contig103610:1000..1331+ (Himanthalia elongata Himel1 dioecious)
GCAACAGTGCTCGTCCGTGTCCGGATCCTCCCCGTCCCCACCCCCAATGC
CGCCGCTCCAACTCCACCTTCAGCTGACCGCTGCCGTCGCCGGGGGCCTC
GCGATTTTTCGATGGGTTCATTGTTCTCGGAGTTTAGCGCCGCGGAGGCA
GCCATTTTCTTTGCAGCACTGGCGGCGCGGGCGATGCTGATCCGCCTTGC
CGACGGAGAAGGGCCATCGTCGAGAAGAACGGCGTCGCGGGGCGGTTGCC
GGTCCTTGGCATCTACTGTCGGTGATCCGTTGGGCGAATGCAAGCGCGGC
GCCGAAGCAGCAGCATCATTTTTTGACAGCGCAACAGTGCTCGTCCGTGT
CCGGATCCTCCCCGTCCCCACCCCCAATGCCGCCGCTCCAACTCCACCTT
CAGCTGACCGCTGCCGTCGCCGGGGGCCTCGCGATTTTTCGATGGGTTCA
TTGTTCTCGGAGTTTAGCGCCGCGGAGGCAGCCATTTTCTTTGCAGCACT
GGCGGCGCGGGCGATGCTGATCCGCCTTGCCGACGGAGAAGGGCCATCGT
CGAGAAGAACGGCGTCGCGGGGCGGTTGCCGGTCCTTGGCATCTACTGTC
GGTGATCCGTTGGGCGAATGCAAGCGCGGCGCCGAAGCAGCAGCATCATT
TTTTGACAGC back to top
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