mRNA_H-elongata_contig102365.206.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Homology

BLAST of mRNA_H-elongata_contig102365.206.1 vs. uniprot
Match: A0A6H5KIL8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIL8_9PHAE)

HSP 1 Score: 87.4 bits (215), Expect = 8.080e-19
Identity = 42/51 (82.35%), Postives = 49/51 (96.08%), Query Frame = 1

Query:    1 RIAELIQDMVSVLLLPLYFAVSGLKTDLTLLDNATSWGICVITIAAACVGE 153
            RI EL+QD+VSVLLLPLYFAVSGLKTDLTLLD+ATSWGIC +TI+AAC+G+
Sbjct:  161 RIVELVQDVVSVLLLPLYFAVSGLKTDLTLLDSATSWGICALTISAACLGK 211

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BLAST of mRNA_H-elongata_contig102365.206.1 vs. uniprot
Match: D8LLK5_ECTSI (K+ homeostasis protein Kha1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLK5_ECTSI)

HSP 1 Score: 85.1 bits (209), Expect = 5.240e-18
Identity = 41/51 (80.39%), Postives = 48/51 (94.12%), Query Frame = 1

Query:    1 RIAELIQDMVSVLLLPLYFAVSGLKTDLTLLDNATSWGICVITIAAACVGE 153
            RI EL+QD+VSVLLLPLYFAVSGLKTDLTLLD+AT WGIC +TI+AAC+G+
Sbjct:  306 RIVELVQDVVSVLLLPLYFAVSGLKTDLTLLDSATLWGICALTISAACLGK 356

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BLAST of mRNA_H-elongata_contig102365.206.1 vs. uniprot
Match: A0A426ZWW0_ENSVE (Na_H_Exchanger domain-containing protein n=1 Tax=Ensete ventricosum TaxID=4639 RepID=A0A426ZWW0_ENSVE)

HSP 1 Score: 63.5 bits (153), Expect = 2.020e-10
Identity = 31/51 (60.78%), Postives = 39/51 (76.47%), Query Frame = 1

Query:    1 RIAELIQDMVSVLLLPLYFAVSGLKTDLTLLDNATSWGICVITIAAACVGE 153
            R+ E I+D VSVLLLPLYFA SGLKT++  + +ATSWGI  + I  ACVG+
Sbjct:  318 RLTERIEDFVSVLLLPLYFASSGLKTNVASIKDATSWGILALVICTACVGK 368

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BLAST of mRNA_H-elongata_contig102365.206.1 vs. uniprot
Match: A0A444G2R7_ENSVE (Na_H_Exchanger domain-containing protein n=3 Tax=Musaceae TaxID=4637 RepID=A0A444G2R7_ENSVE)

HSP 1 Score: 63.5 bits (153), Expect = 2.040e-10
Identity = 31/51 (60.78%), Postives = 39/51 (76.47%), Query Frame = 1

Query:    1 RIAELIQDMVSVLLLPLYFAVSGLKTDLTLLDNATSWGICVITIAAACVGE 153
            R+ E I+D VSVLLLPLYFA SGLKT++  + +ATSWGI  + I  ACVG+
Sbjct:  318 RLTERIEDFVSVLLLPLYFASSGLKTNVASIKDATSWGILALVICTACVGK 368

[Close]

BLAST of mRNA_H-elongata_contig102365.206.1 vs. uniprot
Match: A0A0L0RVN0_ALLM3 (Na_H_Exchanger domain-containing protein n=1 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0RVN0_ALLM3)

HSP 1 Score: 62.0 bits (149), Expect = 7.130e-10
Identity = 27/50 (54.00%), Postives = 40/50 (80.00%), Query Frame = 1

Query:    4 IAELIQDMVSVLLLPLYFAVSGLKTDLTLLDNATSWGICVITIAAACVGE 153
            + E ++D+V+++LLPLYFA+SGLKT L LLD AT+WG+ V+ +  AC G+
Sbjct:  514 LTEKVEDLVTIVLLPLYFALSGLKTRLGLLDTATTWGLLVLVLVTACAGK 563

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BLAST of mRNA_H-elongata_contig102365.206.1 vs. uniprot
Match: A0A0L0RUR2_ALLM3 (Na_H_Exchanger domain-containing protein n=1 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0RUR2_ALLM3)

HSP 1 Score: 62.0 bits (149), Expect = 7.130e-10
Identity = 27/50 (54.00%), Postives = 40/50 (80.00%), Query Frame = 1

Query:    4 IAELIQDMVSVLLLPLYFAVSGLKTDLTLLDNATSWGICVITIAAACVGE 153
            + E ++D+V+++LLPLYFA+SGLKT L LLD AT+WG+ V+ +  AC G+
Sbjct:  324 LTEKVEDLVTIVLLPLYFALSGLKTRLGLLDTATTWGLLVLVLVTACAGK 373

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BLAST of mRNA_H-elongata_contig102365.206.1 vs. uniprot
Match: UPI001CC34388 (cation/H(+) antiporter 20-like n=1 Tax=Telopea speciosissima TaxID=54955 RepID=UPI001CC34388)

HSP 1 Score: 61.2 bits (147), Expect = 1.330e-9
Identity = 30/51 (58.82%), Postives = 38/51 (74.51%), Query Frame = 1

Query:    1 RIAELIQDMVSVLLLPLYFAVSGLKTDLTLLDNATSWGICVITIAAACVGE 153
            R+ E I+D VS LLLPLYFA SGLKTD+T +  A +WG+ V+ IA AC G+
Sbjct:  311 RLIERIEDFVSGLLLPLYFASSGLKTDVTKMHGAEAWGLLVLVIATACAGK 361

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BLAST of mRNA_H-elongata_contig102365.206.1 vs. uniprot
Match: A0A1J3DKG9_NOCCA (Cation/H(+) antiporter 19 (Fragment) n=1 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3DKG9_NOCCA)

HSP 1 Score: 57.8 bits (138), Expect = 1.680e-9
Identity = 28/50 (56.00%), Postives = 36/50 (72.00%), Query Frame = 1

Query:    4 IAELIQDMVSVLLLPLYFAVSGLKTDLTLLDNATSWGICVITIAAACVGE 153
            + E I+D+VS LLLPLYFA SGLKTD+T +  A SWG+ V+ I   C G+
Sbjct:   47 LTEKIEDLVSGLLLPLYFASSGLKTDVTTIKGAQSWGLLVLVILTTCFGK 96

[Close]

BLAST of mRNA_H-elongata_contig102365.206.1 vs. uniprot
Match: UPI00053C4778 (cation/H(+) antiporter 20-like n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C4778)

HSP 1 Score: 60.8 bits (146), Expect = 1.820e-9
Identity = 30/51 (58.82%), Postives = 37/51 (72.55%), Query Frame = 1

Query:    1 RIAELIQDMVSVLLLPLYFAVSGLKTDLTLLDNATSWGICVITIAAACVGE 153
            R+ E I+D VSVLLLPLYFA SGLKTD+  +  A +WGI  + IA AC G+
Sbjct:  325 RLIERIEDFVSVLLLPLYFASSGLKTDVAKIRGAEAWGILALVIATACAGK 375

[Close]

BLAST of mRNA_H-elongata_contig102365.206.1 vs. uniprot
Match: A0A4Y7L255_PAPSO (Na_H_Exchanger domain-containing protein n=2 Tax=Papaver somniferum TaxID=3469 RepID=A0A4Y7L255_PAPSO)

HSP 1 Score: 60.8 bits (146), Expect = 1.820e-9
Identity = 30/51 (58.82%), Postives = 37/51 (72.55%), Query Frame = 1

Query:    1 RIAELIQDMVSVLLLPLYFAVSGLKTDLTLLDNATSWGICVITIAAACVGE 153
            R+ E I+D VS LLLPLYFA SGLKTD+T +  A SWG+  + IA AC G+
Sbjct:  310 RLIERIEDFVSGLLLPLYFASSGLKTDVTKIRGAASWGLLALVIAVACAGK 360

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig102365.206.1 vs. uniprot

BLAST of mRNA_H-elongata_contig102365.206.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25

ZOOM

x 1

POSITION

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Match Name	E-value	Identity	Description
A0A6H5KIL8_9PHAE	8.080e-19	82.35	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LLK5_ECTSI	5.240e-18	80.39	K+ homeostasis protein Kha1 n=1 Tax=Ectocarpus sil...	[more]
A0A426ZWW0_ENSVE	2.020e-10	60.78	Na_H_Exchanger domain-containing protein n=1 Tax=E...	[more]
A0A444G2R7_ENSVE	2.040e-10	60.78	Na_H_Exchanger domain-containing protein n=3 Tax=M...	[more]
A0A0L0RVN0_ALLM3	7.130e-10	54.00	Na_H_Exchanger domain-containing protein n=1 Tax=A...	[more]
A0A0L0RUR2_ALLM3	7.130e-10	54.00	Na_H_Exchanger domain-containing protein n=1 Tax=A...	[more]
UPI001CC34388	1.330e-9	58.82	cation/H(+) antiporter 20-like n=1 Tax=Telopea spe...	[more]
A0A1J3DKG9_NOCCA	1.680e-9	56.00	Cation/H(+) antiporter 19 (Fragment) n=1 Tax=Nocca...	[more]
UPI00053C4778	1.820e-9	58.82	cation/H(+) antiporter 20-like n=1 Tax=Tarenaya ha...	[more]
A0A4Y7L255_PAPSO	1.820e-9	58.82	Na_H_Exchanger domain-containing protein n=2 Tax=P...	[more]

Pages

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622929561.641049-CDS-H-elongata_contig102365:1359..1494	1622929561.641049-CDS-H-elongata_contig102365:1359..1494	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig102365 1360..1494 -
1691679071.048605-CDS-H-elongata_contig102365:1359..1494	1691679071.048605-CDS-H-elongata_contig102365:1359..1494	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig102365 1360..1494 -

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622929561.6537724-UTR-H-elongata_contig102365:1494..1518	1622929561.6537724-UTR-H-elongata_contig102365:1494..1518	Himanthalia elongata Himel1 dioecious	UTR	H-elongata_contig102365 1495..1518 -
1691679071.0630715-UTR-H-elongata_contig102365:1494..1518	1691679071.0630715-UTR-H-elongata_contig102365:1494..1518	Himanthalia elongata Himel1 dioecious	UTR	H-elongata_contig102365 1495..1518 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig102365.206.1	prot_H-elongata_contig102365.206.1	Himanthalia elongata Himel1 dioecious	polypeptide	H-elongata_contig102365 1360..1494 -