mRNA_H-elongata_contig10214.193.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig10214.193.1
Unique NamemRNA_H-elongata_contig10214.193.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig10214.193.1 vs. uniprot
Match: D7FNV2_ECTSI (Rab1B, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNV2_ECTSI)

HSP 1 Score: 367 bits (942), Expect = 5.900e-128
Identity = 187/198 (94.44%), Postives = 190/198 (95.96%), Query Frame = 1 
Query:    1 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDSKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQIKSRMKTQPTNRPHATNKLTPSTQVPGSGSGGGCC 594
            DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDSKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQIKSRMK+QPT  P    +LT STQV G+GSGGGCC
Sbjct:    6 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDSKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQIKSRMKSQPTGAPRGGTRLTASTQVSGAGSGGGCC 203
[Close]
BLAST of mRNA_H-elongata_contig10214.193.1 vs. uniprot
Match: A0A836CKR4_9STRA (Ras related protein PiYpt1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKR4_9STRA)

HSP 1 Score: 339 bits (870), Expect = 5.560e-117
Identity = 172/198 (86.87%), Postives = 180/198 (90.91%), Query Frame = 1 
Query:    1 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDSKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQIKSRMKTQPTNRPHATNKLTPSTQVPGSGSGGGCC 594
            DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDSKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTD++SF NVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAK FAD+LGIEFLETSAKNA+NV+ AFM M++ IK RMKTQPT       KLTPS QV G  + GGCC
Sbjct:    6 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDSKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDRDSFQNVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKEFADSLGIEFLETSAKNATNVDSAFMTMSAAIKGRMKTQPTAGAKGGTKLTPSAQVSGGATSGGCC 203
[Close]
BLAST of mRNA_H-elongata_contig10214.193.1 vs. uniprot
Match: A0A835YQS3_9STRA (Ras related protein PiYpt1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQS3_9STRA)

HSP 1 Score: 327 bits (839), Expect = 3.040e-112
Identity = 166/199 (83.42%), Postives = 177/199 (88.94%), Query Frame = 1 
Query:    1 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDSKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQIKSRMKTQPTNRPHATNKLTPSTQVPGSGSGG-GCC 594
            DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRT+ELD KT+KLQIWDTAGQERFRTIT+SYYRGAHGIIVVYDVTD+ESFNNVKQWL EI+RYACENVNKLLVGNKSDLEAKRAVTTEE K FAD++GIEFLETSAKNA NVEKAF+MM+ QIK RMKT P        +LT   QV G G+GG GCC
Sbjct:    6 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKTVKLQIWDTAGQERFRTITASYYRGAHGIIVVYDVTDRESFNNVKQWLTEIERYACENVNKLLVGNKSDLEAKRAVTTEEGKEFADSIGIEFLETSAKNADNVEKAFLMMSQQIKGRMKTAPAGGAKGGTRLTAGEQVGGGGAGGSGCC 204
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BLAST of mRNA_H-elongata_contig10214.193.1 vs. uniprot
Match: YPT1_PHYIN (Ras-like GTP-binding protein YPT1 n=22 Tax=Oomycota TaxID=4762 RepID=YPT1_PHYIN)

HSP 1 Score: 324 bits (831), Expect = 4.540e-111
Identity = 169/198 (85.35%), Postives = 177/198 (89.39%), Query Frame = 1 
Query:    1 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDSKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQIKSRMKTQPTNRPHATNKLTPSTQVPGSGSGGGCC 594
            DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELD KTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTD+ESFNNVKQWLHEIDRYACENVNKLLVGNKSDL AKR V+T+ AK FA++LGIEFLETSAKNA+NVEKAFMMMA+QIK RM   P   P A  KLTP  QVP +G G  CC
Sbjct:    6 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEIDRYACENVNKLLVGNKSDLTAKRVVSTDAAKEFAESLGIEFLETSAKNAANVEKAFMMMAAQIKKRMANAPV-APKAGVKLTPGQQVPSNG-GSKCC 201
[Close]
BLAST of mRNA_H-elongata_contig10214.193.1 vs. uniprot
Match: W7TST3_9STRA (Rab family gtpase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TST3_9STRA)

HSP 1 Score: 324 bits (830), Expect = 6.910e-111
Identity = 166/198 (83.84%), Postives = 176/198 (88.89%), Query Frame = 1 
Query:    1 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDSKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQIKSRMKTQPTNRPHATNKLTPSTQVPGSGSGGGCC 594
            DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL+ KTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTD+ESFNNVKQWLHEI+RYA ENVNKLLVGNKSDLE KR V+TE AK FAD+LGI FLETSAKN++NVEKAF+ MASQIK+RMKTQP        KLT ST V G G+  GCC
Sbjct:    6 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEINRYASENVNKLLVGNKSDLEPKRVVSTETAKEFADSLGIAFLETSAKNSTNVEKAFLTMASQIKARMKTQPVGPKTGGTKLTASTAVGGPGASSGCC 203
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BLAST of mRNA_H-elongata_contig10214.193.1 vs. uniprot
Match: K3W769_GLOUD (Uncharacterized protein n=4 Tax=Oomycota TaxID=4762 RepID=K3W769_GLOUD)

HSP 1 Score: 322 bits (825), Expect = 3.720e-110
Identity = 169/198 (85.35%), Postives = 176/198 (88.89%), Query Frame = 1 
Query:    1 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDSKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQIKSRMKTQPTNRPHATNKLTPSTQVPGSGSGGGCC 594
            DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELD KTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTD+ESFNNVKQWLHEIDRYACENVNKLLVGNKSDL AKR V+TE AK FA++LGIEFLETSAKNA+NVEKAFMMMA+QIK RM   PT  P  T KL   T V  +G GG CC
Sbjct:    6 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEIDRYACENVNKLLVGNKSDLTAKRVVSTEAAKEFAESLGIEFLETSAKNAANVEKAFMMMAAQIKKRMANAPT-APKPTLKLNQGTNVQQNG-GGKCC 201
[Close]
BLAST of mRNA_H-elongata_contig10214.193.1 vs. uniprot
Match: A0A140YWP8_PHYNI (Ras-related protein (Fragment) n=4 Tax=Peronosporaceae TaxID=4777 RepID=A0A140YWP8_PHYNI)

HSP 1 Score: 320 bits (821), Expect = 1.230e-109
Identity = 165/192 (85.94%), Postives = 174/192 (90.62%), Query Frame = 1 
Query:    1 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDSKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQIKSRMKTQPTNRPHATNKLTPSTQVPGSG 576
            DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELD KTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTD+ESFNNVKQWLHEIDRYACENVNKLLVGNKSDL AKR V+T+ AK FA++LGIEFLETSA+NA+NVEKAFMMMA+QIK RM   P   P A  KLTP  QVP +G
Sbjct:    1 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEIDRYACENVNKLLVGNKSDLTAKRVVSTDAAKEFAESLGIEFLETSARNAANVEKAFMMMAAQIKKRMANAPV-APKAGVKLTPGQQVPSNG 191
[Close]
BLAST of mRNA_H-elongata_contig10214.193.1 vs. uniprot
Match: A0A067C976_SAPPC (Ras-like GTP-binding protein YPT1 n=11 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C976_SAPPC)

HSP 1 Score: 320 bits (819), Expect = 2.950e-109
Identity = 167/198 (84.34%), Postives = 175/198 (88.38%), Query Frame = 1 
Query:    1 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDSKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQIKSRMKTQPTNRPHATNKLTPSTQVPGSGSGGGCC 594
            DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELD KTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTD+ESFNNVKQWLHEIDRYACENVNKLLVGNKSDL AKR V+T+ AK FAD+LGIEFLETSAKNA+NVEKAFMMMA+QIK RM + P     A + L P   V  SG  GGCC
Sbjct:    6 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEIDRYACENVNKLLVGNKSDLTAKRVVSTDAAKDFADSLGIEFLETSAKNAANVEKAFMMMAAQIKKRMASAPMQSKPAIS-LQPGQNV--SGKSGGCC 200
[Close]
BLAST of mRNA_H-elongata_contig10214.193.1 vs. uniprot
Match: A0A024FYE8_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FYE8_9STRA)

HSP 1 Score: 319 bits (818), Expect = 4.490e-109
Identity = 167/198 (84.34%), Postives = 174/198 (87.88%), Query Frame = 1 
Query:    1 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDSKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQIKSRMKTQPTNRPHATNKLTPSTQVPGSGSGGGCC 594
            DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELD KTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTD+ESFNNVKQWLHEIDRYACENVNKLLVGNKSDL AKR VTTE    FAD LGIEFLETSAKNA+NVE+AFM MASQIK RM   PT  P  + K++P  Q+P S SG  CC
Sbjct:    6 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEIDRYACENVNKLLVGNKSDLVAKRVVTTETGAQFADELGIEFLETSAKNAANVEEAFMKMASQIKKRMANAPT-APKQSIKISPGQQLP-SNSGSKCC 201
[Close]
BLAST of mRNA_H-elongata_contig10214.193.1 vs. uniprot
Match: A0A6A3UIH2_9STRA (Ras-like GTP-binding protein n=90 Tax=Phytophthora TaxID=4783 RepID=A0A6A3UIH2_9STRA)

HSP 1 Score: 322 bits (824), Expect = 5.950e-109
Identity = 166/192 (86.46%), Postives = 174/192 (90.62%), Query Frame = 1 
Query:    1 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDSKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQIKSRMKTQPTNRPHATNKLTPSTQVPGSG 576
            DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELD KTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTD+ESFNNVKQWLHEIDRYACENVNKLLVGNKSDL AKR V+T+ AK FA++LGIEFLETSAKNA+NVEKAFMMMA+QIK RM   P   P A  KLTP  QVP +G
Sbjct:    6 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEIDRYACENVNKLLVGNKSDLTAKRVVSTDAAKEFAESLGIEFLETSAKNAANVEKAFMMMAAQIKKRMANAPV-APKAGVKLTPGQQVPSNG 196
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10214.193.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNV2_ECTSI5.900e-12894.44Rab1B, RAB family GTPase n=2 Tax=Ectocarpus TaxID=... [more]
A0A836CKR4_9STRA5.560e-11786.87Ras related protein PiYpt1 n=1 Tax=Tribonema minus... [more]
A0A835YQS3_9STRA3.040e-11283.42Ras related protein PiYpt1 n=1 Tax=Tribonema minus... [more]
YPT1_PHYIN4.540e-11185.35Ras-like GTP-binding protein YPT1 n=22 Tax=Oomycot... [more]
W7TST3_9STRA6.910e-11183.84Rab family gtpase n=2 Tax=Monodopsidaceae TaxID=42... [more]
K3W769_GLOUD3.720e-11085.35Uncharacterized protein n=4 Tax=Oomycota TaxID=476... [more]
A0A140YWP8_PHYNI1.230e-10985.94Ras-related protein (Fragment) n=4 Tax=Peronospora... [more]
A0A067C976_SAPPC2.950e-10984.34Ras-like GTP-binding protein YPT1 n=11 Tax=Saprole... [more]
A0A024FYE8_9STRA4.490e-10984.34Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
A0A6A3UIH2_9STRA5.950e-10986.46Ras-like GTP-binding protein n=90 Tax=Phytophthora... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig10214contigH-elongata_contig10214:4077..6294 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score371.3
Seed ortholog evalue2.8e-100
Seed eggNOG ortholog2880.D7FNV2
KEGG koko:K07874
KEGG Pathwayko05134,map05134
EggNOG free text desc.GTPase activity
EggNOG OGsKOG0084@1,KOG0084@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04031,ko04131,ko04147
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionRab1B, RAB family GTPase
Ec32 orthologEc-12_003250.1
Exons5
Model size597
Cds size597
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig10214.193.1prot_H-elongata_contig10214.193.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig10214 4077..6294 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929560.6002266-CDS-H-elongata_contig10214:4076..42771622929560.6002266-CDS-H-elongata_contig10214:4076..4277Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10214 4077..4277 -
1691679070.5304396-CDS-H-elongata_contig10214:4076..42771691679070.5304396-CDS-H-elongata_contig10214:4076..4277Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10214 4077..4277 -
1622929560.6131978-CDS-H-elongata_contig10214:4554..46421622929560.6131978-CDS-H-elongata_contig10214:4554..4642Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10214 4555..4642 -
1691679070.5421777-CDS-H-elongata_contig10214:4554..46421691679070.5421777-CDS-H-elongata_contig10214:4554..4642Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10214 4555..4642 -
1622929560.6232297-CDS-H-elongata_contig10214:5041..51811622929560.6232297-CDS-H-elongata_contig10214:5041..5181Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10214 5042..5181 -
1691679070.5530834-CDS-H-elongata_contig10214:5041..51811691679070.5530834-CDS-H-elongata_contig10214:5041..5181Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10214 5042..5181 -
1622929560.6336048-CDS-H-elongata_contig10214:5644..56921622929560.6336048-CDS-H-elongata_contig10214:5644..5692Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10214 5645..5692 -
1691679070.5617495-CDS-H-elongata_contig10214:5644..56921691679070.5617495-CDS-H-elongata_contig10214:5644..5692Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10214 5645..5692 -
1622929560.6441417-CDS-H-elongata_contig10214:6174..62941622929560.6441417-CDS-H-elongata_contig10214:6174..6294Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10214 6175..6294 -
1691679070.5697863-CDS-H-elongata_contig10214:6174..62941691679070.5697863-CDS-H-elongata_contig10214:6174..6294Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10214 6175..6294 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig10214.193.1

>prot_H-elongata_contig10214.193.1 ID=prot_H-elongata_contig10214.193.1|Name=mRNA_H-elongata_contig10214.193.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=199bp
DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDSK
TIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHE
IDRYACENVNKLLVGNKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNA
SNVEKAFMMMASQIKSRMKTQPTNRPHATNKLTPSTQVPGSGSGGGCC*
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mRNA from alignment at H-elongata_contig10214:4077..6294-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig10214.193.1 ID=mRNA_H-elongata_contig10214.193.1|Name=mRNA_H-elongata_contig10214.193.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2218bp|location=Sequence derived from alignment at H-elongata_contig10214:4077..6294- (Himanthalia elongata Himel1 dioecious)
GACTATCTCTTTAAGCTGCTCTTGATCGGAGACTCGGGCGTGGGAAAGTC
CTGTCTGTTGTTGCGGTTCGCCGATGACACGTACACGGAAAGCTACATCT
CTACGATCGGGGTGGACTTTGTGAGTTTCGATGATAGACCCTTTTTTTTC
GTTTAGCGGTGACTCTGCGCTTCGTTTTCTCTCCCCCATGTAGATTCAAG
GGGTGCGGATGTCGTCGAAGCTCATTATGGTAAATAATATGCGACGTGGT
CAGCGCCAGCGATGCTGCGACTGTGAATCAATGTATCGTACCGATACACC
GATTAAAGGGTAATTGACCCTGCGGCTCCCAACACACTTGCCACTGTTAC
TAGTGATGTAGTAAAGGTGAAGATGTTCGGAGGGTTTAGTTGAATTCATA
GCTTTTTTAGTGAAAAGAAGCTTTGGAACATATTTCACGGGAGAATCATT
TTCGTGGGAATATACTCACCATCTGGGTCCCAATCGAAATTATGGCCGGA
TAATGGCCAGATGAGCCGACGGGGTCGTGGGAGCCGACGCGCATCGTTCT
TGTTACCTTATCTCTTGTCGAAACCCCAATGACCCGACCCGCGTGCCGGC
AGAAAATCCGCACCATCGAACTTGATAGCAAGACCATCAAGCTGCAGATT
GTGAGTGCAACTTCCCCATCCTACGGGAGAGGTGGAATGTGTTTGATTAT
GTCATGACTTTCCTGAGAGCTTTCGGAGGTCTGACGGACAAGAGGACGGC
GTCGCGTCCGGTCACTTCACGCGGCTTTTGATAGCCAGCTAACTTTTGAT
ACAAGTTGTTCATGGCTTCATGGTAGTAACTAAAATGCGTAGATATATTT
TTCTAAAACTTGTTTGCATTTCGTGGTATCGGGGTGTTGACCCTATTTTG
TTTGTTTGTTTTAAAGCGCCTCAATCGCGTAAATCTTACCGCGCGTAAAA
CAACGGCTCGCGTCGCTTCTTGGGCAACGATATCCTCGTTGCCTCAAGTC
ACCATTACGGCGAGGTTGGTGCTTTTCTAGGCCGCTGCGCTTTGCGCCAG
ATCGTGTGTGAAGGACACGTTTTTGTTGTGTTGTTTTTTTATCCCCTGGT
GTTTCTCGGACAGTGGGACACCGCGGGACAGGAGCGGTTCCGGACGATTA
CGTCCTCGTACTACCGTGGAGCTCACGGCATCATCGTGGTGTACGACGTC
ACGGACAAAGAGTCCTTTAACAACGTCAAGCAATGGCTGCACGAGATCGA
CAGGTGGGTCGTTTTGTCGATGGTCCATAACGCCATCTAAAAGTATCGGA
TGTCGCACAAGCTTGTGAAGACGGTTTGCGAGAGTGGTTTTAAAGGATGT
CCAGTTCTTAGTGCGTGTTGGAATATCCGGAAGGGATTTCAAAACAGAGT
GGTTGGATTCTTTAGGTGGGCCAAGGTTACAGCGTCGAGAAGGGTTTTAA
AGGATGATCACTTCCTGTGCGGTTTAGGCCCCGTAAGGATCTACAAATGA
GAGTTCGTGGAAATATTTTCGTTGACTGCAACGCTCCCACACGAGCGAAA
AATGTTTGGAAGAAGGATGGCTGGCGGCTGTGAAGCTTTTGCTGGACTCG
CCGTGCCGTTCTAACCGATACCGTTTTTGTGTGATGCATGAAAATACAAC
AGGTATGCGTGTGAAAATGTGAACAAGTTGCTGGTGGGAAACAAGAGCGA
TCTCGAGGCCAAGCGTGCGGTTACGACGGAAGAGGCCAAGGTACACTACA
ATCTGACGGAAATGTGGTGCGGTAGTGTCTAGGGCCCTGTTGTTAGTATT
CACCCAAACGTGGCGCCGTGCTGCAATAACGAAAATGTTGCAATTCGGCA
AGCGATGAAGGTTTCAAAGATAGGCAACAACGCTTGACTAAATTACGCAA
GGTTTCTTGTGTGGAGACGCGTGCACCACAATCAATGAAAAGTCAACCGC
TCCGCATGCGATTAATATACTGTATAAATTTATACATCTATATATACCGC
GTCGGGTACGAAAACAGGCGTTCGCGGACACCCTGGGGATCGAGTTCCTG
GAGACCTCGGCCAAGAACGCTTCGAACGTCGAAAAGGCATTCATGATGAT
GGCGAGCCAGATCAAGTCGCGCATGAAGACCCAGCCTACCAATCGGCCCC
ATGCCACTAATAAGCTCACCCCCTCCACACAAGTCCCGGGGTCGGGATCA
GGTGGCGGGTGCTGCTAA
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Coding sequence (CDS) from alignment at H-elongata_contig10214:4077..6294-

>mRNA_H-elongata_contig10214.193.1 ID=mRNA_H-elongata_contig10214.193.1|Name=mRNA_H-elongata_contig10214.193.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1194bp|location=Sequence derived from alignment at H-elongata_contig10214:4077..6294- (Himanthalia elongata Himel1 dioecious)
GACTATCTCTTTAAGCTGCTCTTGATCGGAGACTCGGGCGTGGGAAAGTC
CTGTCTGTTGTTGCGGTTCGCCGATGACACGTACACGGAAAGCTACATCT
CTACGATCGGGGTGGACTTTGACTATCTCTTTAAGCTGCTCTTGATCGGA
GACTCGGGCGTGGGAAAGTCCTGTCTGTTGTTGCGGTTCGCCGATGACAC
GTACACGGAAAGCTACATCTCTACGATCGGGGTGGACTTTAAAATCCGCA
CCATCGAACTTGATAGCAAGACCATCAAGCTGCAGATTAAAATCCGCACC
ATCGAACTTGATAGCAAGACCATCAAGCTGCAGATTTGGGACACCGCGGG
ACAGGAGCGGTTCCGGACGATTACGTCCTCGTACTACCGTGGAGCTCACG
GCATCATCGTGGTGTACGACGTCACGGACAAAGAGTCCTTTAACAACGTC
AAGCAATGGCTGCACGAGATCGACAGTGGGACACCGCGGGACAGGAGCGG
TTCCGGACGATTACGTCCTCGTACTACCGTGGAGCTCACGGCATCATCGT
GGTGTACGACGTCACGGACAAAGAGTCCTTTAACAACGTCAAGCAATGGC
TGCACGAGATCGACAGGTATGCGTGTGAAAATGTGAACAAGTTGCTGGTG
GGAAACAAGAGCGATCTCGAGGCCAAGCGTGCGGTTACGACGGAAGAGGC
CAAGGTATGCGTGTGAAAATGTGAACAAGTTGCTGGTGGGAAACAAGAGC
GATCTCGAGGCCAAGCGTGCGGTTACGACGGAAGAGGCCAAGGCGTTCGC
GGACACCCTGGGGATCGAGTTCCTGGAGACCTCGGCCAAGAACGCTTCGA
ACGTCGAAAAGGCATTCATGATGATGGCGAGCCAGATCAAGTCGCGCATG
AAGACCCAGCCTACCAATCGGCCCCATGCCACTAATAAGCTCACCCCCTC
CACACAAGTCCCGGGGTCGGGATCAGGTGGCGGGTGCTGCTAAGCGTTCG
CGGACACCCTGGGGATCGAGTTCCTGGAGACCTCGGCCAAGAACGCTTCG
AACGTCGAAAAGGCATTCATGATGATGGCGAGCCAGATCAAGTCGCGCAT
GAAGACCCAGCCTACCAATCGGCCCCATGCCACTAATAAGCTCACCCCCT
CCACACAAGTCCCGGGGTCGGGATCAGGTGGCGGGTGCTGCTAA
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