mRNA_H-elongata_contig10104.97.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig10104.97.1
Unique NamemRNA_H-elongata_contig10104.97.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig10104.97.1 vs. uniprot
Match: D8LJB2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJB2_ECTSI)

HSP 1 Score: 441 bits (1133), Expect = 1.770e-133
Identity = 368/956 (38.49%), Postives = 474/956 (49.58%), Query Frame = 3
Query:  360 QRNTGALLIAHNGLAKLLAARLPWLIGGVLDAPRLLSHLSRICRDGLHQLEAQLSGAEIGSASGVEE--------------TKQANKFGKLLASFCTLMAGLLRYLGPECPPLERRRAYELLAKTAAVVYPGVIALRRAERNVPASAAGAIRASSLSAVVAERLYPQTTEAFLSICGPPPCHSHRAVS-----NSSRQTPTASND------------------------------TCRCFEQPDPTEKGEGGRLPSRRGHDPWESLEALRPARPQGGSRSHGTAND-----SRVRAVNAALD--RNGGNEGDGNCLPGADPLGAVLLLCEALRSEGKLYGVVTA-------RLLECCTWISDYLAFLFQKWVETATVENGRDLSARGSADGDDFVGDVVSTALCDETGDALGLFVARLALTEDFEQAQVKLVEGCVCHPHPLCREIWLRAFKVFLRMCDPTAQSSCVQTFTDAAIDPRLSSRHRRRLARALSA-CTA-----------------------PRALDAAAYGRLRQILLSRLREEHDNISEGGNVAAIEVSDEFARDPASAVLGSKSTRELRRACALELLSGV-SMRSFAS------DDEVLSASSAALAE-AAVVAGLRDAGEKSCVLSASDAGSSNSSRKRNREESLAAAAKFLAVS-SGSGNLAPRKTGHVQGRSIAKTEEATRVAGRALGIALTGDGSTFLTMTHVSGHPLAAITVLMAKIDPSKLPRLCSLIVESAEDGRVNGEGLLALAEGLSSMG-RQSFPSNPVDATIWEATMKNGFGLLFDCG-LWPVATVAMQALEE--------IARHADPRTAELLPRLLPRSRLSSFKARLSKKVATLEGGKLIELERLRKRGWAEWELFASAASAFAEETRTRSSRSPTSASIHPSGQDRQVVLRKGGNLSAMAGLLSSTIVGIELQSDQAGGGVRITLRGK*W 2909
            Q NT ALL+AHN LAKLL    PWL+GGV+DAPRLLS L  I RDGL QL+  L+ A+   A+  EE              T    KFGKLLA+F T MA LLR+LGPECPP ERR A+ L AK  A VYPG++A  RA   V   AA A        V    +YP+  EAF+S    PPC      +     N SR  PT+S                                +CRC+E          G L  RR HDPWE+LEALRP   +          D     SR    +AA D  R+  +E + +     DPLGAVLLLCE LR   + YG   A       R   CC W+ D+LA LF  WV++A                          AL  E    LG+FV R A+  +F++AQV+L+EGC CHPHP+CRE+W+ A KVFL  CD  AQ +C+Q+ T+AA+DPR+S R RRRL RAL+A C A                       P  L  A  G L Q  LSRLR E  +    G+ ++I  S                      ACAL+LL  + S RSF+       DDE L+A+SA+ A  +A  A L  +     V      GSS   R+R  E++L A A+FLA         A      + G +      A R   R LG  LT  G +      +S   L+AIT L+A+ DP +LP+LCS++   A DGRV GE +LALAEGLSS+G RQ  PS      I       GF  L +C   W   T+    +          +AR  DP    LLPR +P  RL++FK RL ++   L+GG  I+LE +R+RG AE  + ++AA A A +  T  S           GQ RQ+VL++GG+LSA+AGLL++T+ GI L S++ GGGV +TL+G  W
Sbjct:  169 QNNTPALLMAHNALAKLLKNNWPWLVGGVVDAPRLLSRLCEIYRDGLDQLKIALAQADAKHAASGEEHSCVNRSAGGGAGDTAHLKKFGKLLATFGTRMACLLRHLGPECPPRERRAAFRLYAKATASVYPGLLASLRARDFVGDDAATA------GGVAGCIIYPKAVEAFVSTTDEPPCCQSGVSATGRGENGSRSPPTSSRKVGPLVDAGGSSCAAFSSAGGVAERERNLRPSCRCYEGTTT------GPLSGRR-HDPWEALEALRPTPNRXXXXXXXXIADPSRTSSRSSDASAATDDSRDAVHEPESS----VDPLGAVLLLCEFLR---RGYGTAPAAGGARGPRREACCAWVLDHLAALFPGWVDSAAXXXXXXXXXXX--------------ALTGEVSATLGVFVCRRAMDGEFQEAQVQLIEGCSCHPHPVCREVWVGALKVFLGRCDSAAQEACIQSLTNAALDPRVSRRCRRRLGRALAAVCVAMTTGVPLADSGSPTGGPSASAAVPLLLPRARAG-LFQACLSRLRGEQLDEDSSGD-SSIRAS--------GGRXXXXXXXXXXXACALDLLRALPSWRSFSGVNGGGHDDEELTAASASFARTSATTADLLRSEAARGVRGEHSPGSSL--RQREEEDNLVAGARFLAARPQQERKQAAGAEVDMGGEAEGGLGAAAREVARELGGMLTSSGLS----GGLSERALSAITRLVAREDPDRLPQLCSVVAREAVDGRVGGEAVLALAEGLSSVGQRQPLPSKGRAGNI-------GFNRLEECPPRWVRGTLRFSLVARRHGSHGNAVARCVDPSITALLPRQIPEHRLAAFKGRLGRRTVYLDGGGPIKLEEIRERGLAETRVLSAAAVALAAKRGTTESE----------GQTRQIVLKEGGDLSALAGLLANTVTGIRLLSEREGGGVCLTLKGGAW 1057          
BLAST of mRNA_H-elongata_contig10104.97.1 vs. uniprot
Match: A0A6H5JIM5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM5_9PHAE)

HSP 1 Score: 288 bits (736), Expect = 2.340e-79
Identity = 255/664 (38.40%), Postives = 320/664 (48.19%), Query Frame = 3
Query:  360 QRNTGALLIAHNGLAKLLAARLPWLIGGVLDAPRLLSHLSRICRDGLHQLEAQLSGAEIGSASGVEETKQAN--------------KFGKLLASFCTLMAGLLRYLGPECPPLERRRAYELLAKTAAVVYPGVIALRRAERNVPASAAGAIRASSLSAVVAERLYPQTTEAFLSICGPPPCHSHRAVS-----NSSRQTPTASND------------------------------TCRCFEQPDPTEKGEGGRLPSRRGHDPWESLEALRPA-RPQGGSRSHGTANDSRVRAVNAALDRNGGNEGDGNCLPGADPLGAVLLLCEALRSEGKLYGVVTA-------RLLECCTWISDYLAFLFQKWVETATVENGRDLSARGSADGDDFVGDVVSTALCDETGDALGLFVARLALTEDFEQAQVKLVEGCVCHPHPLCREIWLRAFK----VFLRMCDPTAQSSCVQTFTDAAIDPRLSSRHRRRLARALSA-CTA----------------PRALDAA------AYGRLRQILLSRLR-EEHDNISEGGNVAAIEVSDEFARDPASAVLGSKSTRELRRACALELLSGV-SMRSFAS------DDEVLSASSAALAE-AAVVAGLRDAGEKSCVLSASDAGSSNSSRKRNREESLAAAAKFLAV 2072
            Q NT ALL+AHN L+KLL    PWL+GGV+DAPRLLS L  I RDGL QL+  L+ A+  +A+  EE +  N              KFGKLLA+F T MA LLR+LGPEC P +RR A+ L AK  A VYPG++A  RA   V   A      ++   V    +YP+  EAFLS    PPC      +     N+SR  PT S                                +CRC+E          G L  +R HDPWE+LEALRP  RP     +  T   SR    + A D +     D    P  DPLGAVLLLCE LR   + YG   A       R   CC W+ D+LA LF  WV++A    G+     G A          S AL  E    LG+ V R A+  +F++AQV+L+EGC CHPHP+CRE+W+ A K       + CDP AQ  C+Q+  +AA+DPR+S R RRRL RAL+A C A                P A  AA      A   L Q  LSRLR E+ D  S G         D   R  AS             ACAL+LL  + S RSF+       DD+ L+ +S + A  +A  A L  +     V      GSS   R+R  EE+L A A+FLA 
Sbjct:  163 QNNTPALLMAHNALSKLLKNNWPWLVGGVVDAPRLLSRLCEIYRDGLGQLDIALAQADAKNAASSEEPRSGNRSAGGGAGDTAHLKKFGKLLATFGTRMACLLRHLGPECRPRKRREAFRLYAKATASVYPGLLASLRARDVVGDDA------TTTGGVAGCIIYPKAVEAFLSTTDEPPCCQSGVSAIGHGENASRSPPTNSRKASPLVDAGGSSCAAFSSAGRVAERERNLRRSCRCYEG------ATTGPLSGQR-HDPWEALEALRPPNRPP--LITDPTRTSSRSSDSSTATDDSRDAAHDLQSSPAVDPLGAVLLLCEFLR---RGYGAAPAAGGARGPRRETCCAWVLDHLAALFPGWVDSAAGGGGQ-----GGA----------SAALAGEVSATLGVVVCRRAMDGEFQEAQVQLIEGCSCHPHPVCREVWVGALKGKTDAGWKECDPAAQEVCIQSLANAALDPRVSPRCRRRLGRALAAVCVATTTGAPPTDSGSPAGGPTASAAAPLLLPRARAGLFQACLSRLRGEQLDGDSSG---------DSSIR--ASGXXXXXXXXXXXXACALDLLRALPSCRSFSGVHGGSEDDKELAVASVSFARTSATTADLLRSEAARGVGGEPSPGSSL--RQREEEENLVAGARFLAA 780          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10104.97.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LJB2_ECTSI1.770e-13338.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JIM5_9PHAE2.340e-7938.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig10104contigH-elongata_contig10104:155..7918 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons13
Model size3263
Cds size2295
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929551.5113328-UTR-H-elongata_contig10104:154..3331622929551.5113328-UTR-H-elongata_contig10104:154..333Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig10104 155..333 +
1691679066.0273929-UTR-H-elongata_contig10104:154..3331691679066.0273929-UTR-H-elongata_contig10104:154..333Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig10104 155..333 +
1622929551.5274591-UTR-H-elongata_contig10104:549..6161622929551.5274591-UTR-H-elongata_contig10104:549..616Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig10104 550..616 +
1691679066.0365653-UTR-H-elongata_contig10104:549..6161691679066.0365653-UTR-H-elongata_contig10104:549..616Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig10104 550..616 +
1622929551.5377824-UTR-H-elongata_contig10104:1015..11331622929551.5377824-UTR-H-elongata_contig10104:1015..1133Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig10104 1016..1133 +
1691679066.0457592-UTR-H-elongata_contig10104:1015..11331691679066.0457592-UTR-H-elongata_contig10104:1015..1133Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig10104 1016..1133 +
1622929551.5482502-UTR-H-elongata_contig10104:1437..15791622929551.5482502-UTR-H-elongata_contig10104:1437..1579Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig10104 1438..1579 +
1691679066.0623386-UTR-H-elongata_contig10104:1437..15791691679066.0623386-UTR-H-elongata_contig10104:1437..1579Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig10104 1438..1579 +
1622929551.5601516-UTR-H-elongata_contig10104:1976..20811622929551.5601516-UTR-H-elongata_contig10104:1976..2081Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig10104 1977..2081 +
1691679066.076279-UTR-H-elongata_contig10104:1976..20811691679066.076279-UTR-H-elongata_contig10104:1976..2081Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig10104 1977..2081 +
1622929551.6818237-UTR-H-elongata_contig10104:7561..79181622929551.6818237-UTR-H-elongata_contig10104:7561..7918Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig10104 7562..7918 +
1691679066.2145183-UTR-H-elongata_contig10104:7561..79181691679066.2145183-UTR-H-elongata_contig10104:7561..7918Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig10104 7562..7918 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929551.5709693-CDS-H-elongata_contig10104:2081..21591622929551.5709693-CDS-H-elongata_contig10104:2081..2159Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10104 2082..2159 +
1691679066.0862176-CDS-H-elongata_contig10104:2081..21591691679066.0862176-CDS-H-elongata_contig10104:2081..2159Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10104 2082..2159 +
1622929551.580219-CDS-H-elongata_contig10104:2425..31901622929551.580219-CDS-H-elongata_contig10104:2425..3190Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10104 2426..3190 +
1691679066.1277661-CDS-H-elongata_contig10104:2425..31901691679066.1277661-CDS-H-elongata_contig10104:2425..3190Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10104 2426..3190 +
1622929551.5938594-CDS-H-elongata_contig10104:3909..39821622929551.5938594-CDS-H-elongata_contig10104:3909..3982Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10104 3910..3982 +
1691679066.1410093-CDS-H-elongata_contig10104:3909..39821691679066.1410093-CDS-H-elongata_contig10104:3909..3982Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10104 3910..3982 +
1622929551.605865-CDS-H-elongata_contig10104:4187..49141622929551.605865-CDS-H-elongata_contig10104:4187..4914Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10104 4188..4914 +
1691679066.1500888-CDS-H-elongata_contig10104:4187..49141691679066.1500888-CDS-H-elongata_contig10104:4187..4914Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10104 4188..4914 +
1622929551.621074-CDS-H-elongata_contig10104:5131..52821622929551.621074-CDS-H-elongata_contig10104:5131..5282Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10104 5132..5282 +
1691679066.1584644-CDS-H-elongata_contig10104:5131..52821691679066.1584644-CDS-H-elongata_contig10104:5131..5282Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10104 5132..5282 +
1622929551.6325624-CDS-H-elongata_contig10104:5691..57931622929551.6325624-CDS-H-elongata_contig10104:5691..5793Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10104 5692..5793 +
1691679066.1752489-CDS-H-elongata_contig10104:5691..57931691679066.1752489-CDS-H-elongata_contig10104:5691..5793Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10104 5692..5793 +
1622929551.6455894-CDS-H-elongata_contig10104:6531..66631622929551.6455894-CDS-H-elongata_contig10104:6531..6663Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10104 6532..6663 +
1691679066.1854837-CDS-H-elongata_contig10104:6531..66631691679066.1854837-CDS-H-elongata_contig10104:6531..6663Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10104 6532..6663 +
1622929551.656426-CDS-H-elongata_contig10104:6997..71381622929551.656426-CDS-H-elongata_contig10104:6997..7138Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10104 6998..7138 +
1691679066.1943336-CDS-H-elongata_contig10104:6997..71381691679066.1943336-CDS-H-elongata_contig10104:6997..7138Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10104 6998..7138 +
1622929551.6682265-CDS-H-elongata_contig10104:7435..75611622929551.6682265-CDS-H-elongata_contig10104:7435..7561Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10104 7436..7561 +
1691679066.203569-CDS-H-elongata_contig10104:7435..75611691679066.203569-CDS-H-elongata_contig10104:7435..7561Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10104 7436..7561 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig10104.97.1prot_H-elongata_contig10104.97.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig10104 2082..7561 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig10104.97.1

>prot_H-elongata_contig10104.97.1 ID=prot_H-elongata_contig10104.97.1|Name=mRNA_H-elongata_contig10104.97.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=765bp
MAGLLRYLGPECPPLERRRAYELLAKTAAVVYPGVIALRRAERNVPASAA
GAIRASSLSAVVAERLYPQTTEAFLSICGPPPCHSHRAVSNSSRQTPTAS
NDTCRCFEQPDPTEKGEGGRLPSRRGHDPWESLEALRPARPQGGSRSHGT
ANDSRVRAVNAALDRNGGNEGDGNCLPGADPLGAVLLLCEALRSEGKLYG
VVTARLLECCTWISDYLAFLFQKWVETATVENGRDLSARGSADGDDFVGD
VVSTALCDETGDALGLFVARLALTEDFEQAQVKLVEGCVCHPHPLCREIW
LRAFKVFLRMCDPTAQSSCVQTFTDAAIDPRLSSRHRRRLARALSACTAP
RALDAAAYGRLRQILLSRLREEHDNISEGGNVAAIEVSDEFARDPASAVL
GSKSTRELRRACALELLSGVSMRSFASDDEVLSASSAALAEAAVVAGLRD
AGEKSCVLSASDAGSSNSSRKRNREESLAAAAKFLAVSSGSGNLAPRKTG
HVQGRSIAKTEEATRVAGRALGIALTGDGSTFLTMTHVSGHPLAAITVLM
AKIDPSKLPRLCSLIVESAEDGRVNGEGLLALAEGLSSMGRQSFPSNPVD
ATIWEATMKNGFGLLFDCGLWPVATVAMQALEEIARHADPRTAELLPRLL
PRSRLSSFKARLSKKVATLEGGKLIELERLRKRGWAEWELFASAASAFAE
ETRTRSSRSPTSASIHPSGQDRQVVLRKGGNLSAMAGLLSSTIVGIELQS
DQAGGGVRITLRGK*
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mRNA from alignment at H-elongata_contig10104:155..7918+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig10104.97.1 ID=mRNA_H-elongata_contig10104.97.1|Name=mRNA_H-elongata_contig10104.97.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=7764bp|location=Sequence derived from alignment at H-elongata_contig10104:155..7918+ (Himanthalia elongata Himel1 dioecious)
TTGGGCCCGCCAAGCTGGGCGGAAAGCATCACCTTTCCATCCTTCGATGG TTTGAACCCGGCTAAGGAGGCTGATGTGCTGTTGGCGAGAGCTGAGAGTT GCACCCAGAGAGGCGGCACCATCACGACCTCCGTCGTGAACGAGGTCTTC GCCCTAATCCAGCTTGCGGTTGATGACAGGTGGTCGAGCGTGCACCTTGT CTGTACCTCTCTCTGTTTGCACAAAAGCACACGTCACCGCGAAATCCAAC TTACCGTAATCGCCATCCGTTCGTCATTGAACGCTCGATGGCCTCAGCTG ACTGTTCTTGCTCAAATTCTCGTCTCCCCGTATTTTCCGTTGCATTTGGC CAAAATATATTGTTCGGGCGACGGACTGGCGGGGTGGGACCAAAGGCCGA CCGAATGCGGGACTCCATCGCAAACTAGCGAAGAAAAAATATTTCGGAAG AGACTCGCAGAGGTTCGCCCCCCAAGAATATCCTAATCGTACAAACAAAC AAAACATTTCATATCTCGCCGTTGTTTTCGATTTGGATGTAAATCACAAC AGTAATGGCCTTGAGAGAGACGGTCCAACGTACTTTACCCTTCTTAGTAG GAGAATTTTCCCTCCTGTTGATATTATGTTTATGATATTGGCACTCTCAC TCGTTGTATCACGGTCACGCCGCGCAATGAGTGCTGCCGTGAGGTTCGAG GAAAGCGCGGGTTACGTCACGCTTCTTTGGACCACTCAAGGCGTTAGAGG ATGAGCCGTCCCCGTCTCCCCATGGGATTAACGAAGTACACAAAACGATC TCGCGCCACAAATATTTTGCCTCTTTCCTCCCTGGGCGTATTGTAACGGA GGGTATCACAGAAAACAAGGGATTTGTCGAGAAGACTCACGACCGCGTTA CAGCCCCGGGAAACCGGCGAGGAAAGACAAGACGAAGGTCCTCGGAATGC CGTCGTGCTAGCGGCACAGCACTACAGCGGTAAACTGTCATTTTCTCGGG GCGGGAAAGTCTCCTGCTCTTGCCTATGATATATCTGGTTTCGTTTAGCG AGAAAAGCACAAGTTTTGGCCTTGCCAATGATAGCTTTGTCTTGTTCCGT TCGGGTGACAGACCAGGTAGCATTCGCCGATTGAATCTCGACCAAATTAG ATTGCTCAAGCAACCCCAAGCCCGATCATACGACTGTAGACGGTAGGCTA TTGGGTACGATCGAGTAACTCTTTTTGTGGCCGAATATATTGCCTCGGCG GGCAGCGATGGCACATGTCATGATGGCCCGGAGCAATACGGGCGCACTGC TGATCGCGCACAACGGGCTCGCGAAGCTTTTGGCCGCACGACTGCCGTGG CTCATCGGAGGCGTATTGGACGCCCCTCGTCTCCTGTCGCACCTGAGCCG TATCTGCCGCGACGGCCTCCATCAGGCGAGAGGTCGCGTGCCTCGACGAT AGGCAGAGCTTGCATCAGCGCCCGAAACAAATAGCTGTATCGTTCCCGCA GAAGCATGTATCTCATTGTGATGTGTTGGTCTGGTGATTCGCCTTTGTGA CGAGCAACTGCTTCACGACCTTCTGTTACAACTAAAAACAAAACATAACT TGTTTTTTGTGAAACTTTACGCTGCATGATCGTCAGTGAAAAAAAGGATA TTTCAAGCACCGCTGCATTTCTGCCTACTCGAGTTCTCATGCAAGCCTTG TAAAAGTGTACCGGTTTCCTCTGTATCATTACCCTCCTCGCCATCTTCCC CAATGCCCGACCATGGGGAAAATCCATTTTTGCCATGAAACGAACCTATC GATGACGCTGCTGCTACGGTAGCTCGAGGCGCAACTGTCAGGCGCAGAAA TCGGGAGTGCATCGGGAGTGGAAGAAACAAAGCAGGCGAACAAGTTCGGA AAACTCTTGGCAAGCTTCTGCACGCTCATGGCGGGCTTGCTGCGTTATCT GGGGCCAGAGTGCCCTCCCCTCGAGAGACGACGGGCTTACGAGCTTCTGG CGAAGGCGAGCCACCGTTGAACTCGACTGGGTAGTGGTTGGTTTATTGAG TCCCCAACCTCTCGGAGTCGGACTTAACCGGGATTTTACGTCGTTGCCAA TACGCTGGCGCACCTAAATAACGACAGAGCCACCAGTTGTCGGTCGTATG TCCCATTCTAAATTACCAACGTGTTAAATCCTATCGGACCTTATCGTGGT CAATATTCACCACCCATGACTGCCAAATACTATTGCATCTTACGCTTTCC CGTCCACTTGCTCCCCACCAGACCGCCGCCGTCGTCTACCCGGGGGTCAT TGCCTTGCGTCGGGCCGAAAGAAACGTCCCAGCATCTGCTGCCGGCGCAA TTCGGGCGTCATCGTTGTCCGCGGTAGTCGCCGAGCGGCTTTACCCTCAA ACCACGGAGGCGTTCCTATCTATCTGCGGCCCGCCACCATGCCACTCGCA CCGTGCAGTCAGCAACAGCTCTAGACAAACGCCGACGGCGTCAAACGACA CGTGTCGGTGCTTCGAACAACCAGACCCCACAGAAAAGGGTGAAGGGGGA CGGTTGCCGTCGCGGCGGGGGCATGATCCATGGGAATCTTTGGAGGCCCT GCGTCCCGCCAGACCGCAAGGTGGATCGCGTTCGCACGGAACTGCCAATG ATTCAAGAGTGAGAGCAGTGAACGCCGCGCTCGACAGGAACGGTGGCAAC GAAGGAGACGGAAATTGCTTGCCCGGTGCGGACCCTCTCGGCGCAGTTCT GCTTCTGTGTGAGGCACTGCGATCCGAAGGAAAGCTCTACGGGGTGGTAA CGGCGCGGCTTCTCGAGTGCTGCACCTGGATTTCAGACTACCTCGCGTTT TTGTTTCAGAAGTGGGTGGAAACGGCGACGGTAGAAAACGGGCGGGACCT GAGCGCGAGAGGGTCCGCGGATGGTGATGATTTCGTTGGAGACGTAGTAT CGACCGCCCTGTGCGACGAGACTGGCGATGCACTGGGGCTATTCGTCGCC CGTCTTGCGCTGACCGAGGATTTCGAGCAGGCGCAGGTGCGAGCGCGGCG GTGGAACTAGCGTCAGTTGTGGCTTCAGTGATTCGCGTCTTCGTTTCGAT AATTTTCGGGGAGTTAGTGTTGGCGGTCGACGTTGTAGAAACGTTTGTGT GTACATGAATGTCAATGATTGGTGTTATCGTTATCGCAGCATATAGGGAG GACGGGTGATTCAACACTATATATATGGGGATTTGAAAGAGTATTTCTCC GTGTTAAGGGGGAAATGTATCGAGATTCACCCTCGCCTCATGCTTTGCGC ATGAAAATGTTCCAAGTACTACCCATTCCACCAGGGGATCCATCCAATTT GTCCCCGGAAGATGCAGTTTGGATACAGTCCCCATGAACTCCGGGAAAAC TAGTCGGTTCTCCCCCCGCCCCGCCGCCATCTTTGAATTACTCAGACGCC ATTGCAGTAAGTGAGAGGACTGGTGAATATTTGGCTGGTTCAAAACGGCA GTGACAAATGTTTTTTTATGTTGAAGACTGTCCTTCGGGAACACTTTTCT TTCCTAAATCACGTGCCTGTTGAATGCCGCTGCGCCGGAAACCTTCCTCG GCGTAGTGCAGAGAGGTCACCTCCGCGCGATTATCGGTGTCGTTACAGCG TTTCCACCACATTTCTAACTCTGAGCTTATCTCCCGCGACAAGCCGTGCA CGCGTTTACCATAAACGACACGCCCGGTCCCTGCTTGTCGGCGTTATTCC CACAGGTGAAGCTCGTTGAGGGCTGCGTATGCCACCCGCACCCGCTCTGC AGAGAGATCTGGCTCAGGGCTTTCAAAGGTGTGTTCATAGCGATAGGGTT TCTCCCTCATTTCTTCGAGTCGACATGCCTCATATTGGTAGTTTATAGTA CCAACCGAGAGGGTATGTCCCACGTCTGCCCAGCGCGAAATTCCGCCGAT GGTTCATATGCCTCCTCCCCTAACCCCCTAACCCCCTTTGTTCGGCGTGC CGCCTTTCCGAAATCGCACTTTATCATTCACAGTTTTCCTTAGAATGTGC GATCCCACAGCACAGTCGAGCTGCGTTCAAACTTTCACGGACGCCGCGAT AGATCCTCGACTTAGTTCCCGTCACAGGCGCCGCCTAGCCCGGGCGCTGT CTGCGTGCACAGCCCCGAGAGCGCTGGACGCAGCAGCCTACGGTCGCCTT CGTCAAATCTTGCTATCCCGACTACGAGAGGAACATGATAATATTTCGGA GGGTGGTAATGTCGCGGCCATTGAAGTCAGTGATGAGTTTGCCCGCGACC CCGCTTCTGCCGTTCTTGGTAGCAAGAGCACCCGTGAGTTGAGGAGAGCA TGCGCCCTAGAACTCCTCAGCGGCGTGTCGATGCGATCATTTGCAAGCGA CGATGAGGTGCTCAGCGCTTCCAGCGCCGCCCTCGCCGAGGCCGCCGTAG TCGCCGGGCTACGGGACGCGGGCGAAAAATCTTGCGTACTTTCCGCGAGC GATGCAGGAAGCAGCAACAGCAGCAGAAAGCGCAACCGTGAAGAGAGTCT GGCAGCGGCTGCGAAGTTCCTCGCGGTGAGCTCGGGGTCGGGGAACCTTG CCCCGCGGAAAACGGGACATGTACAAGGGAGATCGATCGCCAAGACGGAG GAGGCGACAAGGGTAGCAGGAAGGGCGCTGGGGATTGCGTTGACCGGAGA TGGATCGACGTTCTTAACGATGACGCACGTGTCCGGACATCCGCTGGCCG CGATCACCGTGTGAGGTGTACGCCAGTGATAATATCCCGAAAATCTCAGA AACCGGAATTAGTGCTTAGAGCGGATGTGATGACAACTATAACATCAATC CTCGCGTCCTCTTCAAATCGCCTTGCTTGTTGGTGCACCTCTTTCTCGCC TTACCTCCAGGCACCCGCGGATGCTTACAATCTCTGTCCGTTGGAAACCC TTGCGTCTTCCACGCTCGCTCTCCTAGGCTAATGGCGAAAATTGACCCAA GCAAACTGCCTCGGCTGTGTTCCTTGATAGTCGAGAGTGCAGAGGACGGT AGGGTAAACGGTGAAGGACTGCTGGCGCTAGCGGAAGGTTTGTCGTCCAT GGGCCGCCAATCGTTTCCATCGAACCCGGTGCGTGCCGTCGACGCCATTT GGTGCGACGATTGCGTGTGAACATGATGCATGCCGTTGAAAATGTGAGCG TATTTTGCCTTCGAGAAATACCACCCCTCAGATACACCTTGTTGCATTCT CGCGAAAAGAGGAAGATCATGCCACGGTTTGAAATAAAACATCGTGTCCA GGTGACAACCCTCTGAAGCCTCTCACGCCATGGATCCCACCATGAAAAGC TGCTAGGGTCTGATGCAAAATATGAAGCCAGCTTCTGTGTATCGTTTATT TTTATCCAAGAGGCAGGCCGGCATTCCAGGAATTTCCCTTTGTAAACCGA CTCGGTCATCTCGTGAAATTCCCTCCCGCTCTTACCTATGCGTGTTTTGT TTCTTATATTTCCATCGAACGTGGGATGGAACGAAAGGTCGACGCAACTA TATGGGAAGCAACTATGAAGAACGGCTTCGGGCTGCTGTTCGACTGTGGT CTGTGGCCTGTTGCCACAGTAGCGATGCAGGCGCTCGAGGTGATAGTCGG CTTCTTGGCCAATCAAAGCACAATAATTCCCCTCTAGGTTAGGCCATAAT ATGCTTCCAGAAAGGATTTTAAATCAACCGCGAATATTTTTTTAATATAT GACGACAATCTGGTTTGGCGCCCCTATATGATGAGTAACTACATCTGACG ATTTTGTGCTTAAATGTAGTAAAAATGTGACCCTCTTAACTTTTCTCTCC CTCTTAATTTAACTGAGACATATGTGCAAAGCTGTGCCTAACCCTTCCTA ACCACCACACACAATTCACCCTCCTACGCTCTGGTTTGGCGTCCCCATAT ATGATTAATCACGTGTGACGATTTTGTGCTCAAAGGTAGTAATGTCCACA TTAGAACCCGACGATAGTTGGTCCCCTGGACTACACTTCTCATGGTGCTA AGAAGGCGTGGATGTTCAGAGGGTTCTAATGAATTCAAGGTTTAAAAATA TAAATTGTAGAGCACGCTTGATAAAAGGTCGTATTTTCTCCAGGCGTAGA ATGCGGGTGTAGAATGAATAGCTTCTTTTTGCACTTTTTTTCTTTACTTT AGTTTTTGTCTCTTCTAATGTTAACTTGCTCATCGCCGCTTGTAAGTCTC TTCACCAATCAGCGTAAGCCTCCCCAAAACCCTTAACCACAACCTGGTTT ATACTGGGTGGCACTCATCGCCCCCCTCCCCCCTTCTTCCGTTCTTTGTG TTGGCCCTTAATGCTGCAAATCGGCAGGAGATAGCGAGACACGCCGACCC TCGAACAGCCGAGCTCCTTCCGCGCCTTTTACCGAGGAGCCGCTTGTCAT CATTCAAAGCGCGCTTATCGAAAAAAGTGGCTACCCTGGAGGGTGGGAAG CTAATTGAGGTACATGAAAGGAGACCAGGGCTAAAGTACATGCAGGAATA TTTCACTTCAAGTGATTAGGGCGAGAATGGTTTATGTGTCACGGTATTTG GGCTGTTGAAGTACCCGCAAGCGAATGTGAGCGCTTTTTTCTGATTGGAG AATCACCCCACACACAAATGATTTCGCACGAGCAACGTCCCGTGAAAATT GCCAACCGTCACTTCTATCTGCACCGGCATTTGCGATAAAAACTATCGCA CAAAGTACACCACGCTGGCGTTCGAGAATCGCCGATGTTCTCACAAGCGC GTCCGTCGCTCTCCGTGGTATATTTCCTTCACCCTGGCCAAAGCTTGAAA GGCTTCGCAAACGCGGATGGGCAGAGTGGGAGCTCTTCGCGTCGGCAGCT TCAGCGTTTGCTGAAGAAACAAGAACGCGATCCTCACGTAGTCCCACGAG TGCGAGCATTCATCCGTCGGGGCAGGATCGTCAGGTGCAGTGCTTTGTTT TCCTCCTTCAGAATCAGTCTACCCAAGATCATGTAGCTCAACACATCTAG TGGTAGCGCGTACGCGCAGTACGCGTGCATTTCCCGTGCAAACTTTTCGG GGGGGGGGGGTCCCAAGAGTCAAGCAAGCTCCATTTCCAAAATGTAGTGT TAACGCCTACTGGTATGCTTATCCGCGGACCGCTCCGACTGAAGCGTGCG CAAGTTAAATTTCGCCCCCCTCCTCTCCCCTCTACCTGGATCTTCCACTG AAAGGCTAGCTGCGAACGCGTGAAATACCAGGTGGTGCTGAGAAAGGGGG GAAACTTGAGCGCCATGGCGGGGCTGCTGTCTAGCACCATTGTAGGCATA GAGCTGCAGAGCGACCAGGCGGGAGGTGGGGTGCGCATTACTCTGCGTGG GAAGTAATGGCGCGCTTTGCTGCCAGCTCATTTGATGGCGCCTTGTGTAC AGGACGCGGAGCTCTTCTCTGTGGCTGAGGTGATGAAGCCTCTTCTGCGA TCGCACACAAAGAAGATTCGGCAAAGAAAAAGAGTCGGATTTTAGCCGCT CGGTAGTCTAGTTTCTTTTTGAGAGCACTCGTCTTGCAATAGTTGACCCT CTTGTGGAGAGTACGACAAGATGGACGATGGACGAGTGGAAAGCTATTAA TAAGACGATATCCTTATCCTACTGGTGGTGAAAATGAGGTAGGACGGGCC AGCGTATCCTTCTCCGATTACCGTTTTAAATAACTATCACAAGATAACAC GGAAATGTAAGCGC
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Coding sequence (CDS) from alignment at H-elongata_contig10104:155..7918+

>mRNA_H-elongata_contig10104.97.1 ID=mRNA_H-elongata_contig10104.97.1|Name=mRNA_H-elongata_contig10104.97.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=4590bp|location=Sequence derived from alignment at H-elongata_contig10104:155..7918+ (Himanthalia elongata Himel1 dioecious)
ATGGCGGGCTTGCTGCGTTATCTGGGGCCAGAGTGCCCTCCCCTCGAGAG
ACGACGGGCTTACGAGCTTCTGGCGAAGATGGCGGGCTTGCTGCGTTATC
TGGGGCCAGAGTGCCCTCCCCTCGAGAGACGACGGGCTTACGAGCTTCTG
GCGAAGACCGCCGCCGTCGTCTACCCGGGGGTCATTGCCTTGCGTCGGGC
CGAAAGAAACGTCCCAGCATCTGCTGCCGGCGCAATTCGGGCGTCATCGT
TGTCCGCGGTAGTCGCCGAGCGGCTTTACCCTCAAACCACGGAGGCGTTC
CTATCTATCTGCGGCCCGCCACCATGCCACTCGCACCGTGCAGTCAGCAA
CAGCTCTAGACAAACGCCGACGGCGTCAAACGACACGTGTCGGTGCTTCG
AACAACCAGACCCCACAGAAAAGGGTGAAGGGGGACGGTTGCCGTCGCGG
CGGGGGCATGATCCATGGGAATCTTTGGAGGCCCTGCGTCCCGCCAGACC
GCAAGGTGGATCGCGTTCGCACGGAACTGCCAATGATTCAAGAGTGAGAG
CAGTGAACGCCGCGCTCGACAGGAACGGTGGCAACGAAGGAGACGGAAAT
TGCTTGCCCGGTGCGGACCCTCTCGGCGCAGTTCTGCTTCTGTGTGAGGC
ACTGCGATCCGAAGGAAAGCTCTACGGGGTGGTAACGGCGCGGCTTCTCG
AGTGCTGCACCTGGATTTCAGACTACCTCGCGTTTTTGTTTCAGAAGTGG
GTGGAAACGGCGACGGTAGAAAACGGGCGGGACCTGAGCGCGAGAGGGTC
CGCGGATGGTGATGATTTCGTTGGAGACGTAGTATCGACCGCCCTGTGCG
ACGAGACTGGCGATGCACTGGGGCTATTCGTCGCCCGTCTTGCGCTGACC
GAGGATTTCGAGCAGGCGCAGACCGCCGCCGTCGTCTACCCGGGGGTCAT
TGCCTTGCGTCGGGCCGAAAGAAACGTCCCAGCATCTGCTGCCGGCGCAA
TTCGGGCGTCATCGTTGTCCGCGGTAGTCGCCGAGCGGCTTTACCCTCAA
ACCACGGAGGCGTTCCTATCTATCTGCGGCCCGCCACCATGCCACTCGCA
CCGTGCAGTCAGCAACAGCTCTAGACAAACGCCGACGGCGTCAAACGACA
CGTGTCGGTGCTTCGAACAACCAGACCCCACAGAAAAGGGTGAAGGGGGA
CGGTTGCCGTCGCGGCGGGGGCATGATCCATGGGAATCTTTGGAGGCCCT
GCGTCCCGCCAGACCGCAAGGTGGATCGCGTTCGCACGGAACTGCCAATG
ATTCAAGAGTGAGAGCAGTGAACGCCGCGCTCGACAGGAACGGTGGCAAC
GAAGGAGACGGAAATTGCTTGCCCGGTGCGGACCCTCTCGGCGCAGTTCT
GCTTCTGTGTGAGGCACTGCGATCCGAAGGAAAGCTCTACGGGGTGGTAA
CGGCGCGGCTTCTCGAGTGCTGCACCTGGATTTCAGACTACCTCGCGTTT
TTGTTTCAGAAGTGGGTGGAAACGGCGACGGTAGAAAACGGGCGGGACCT
GAGCGCGAGAGGGTCCGCGGATGGTGATGATTTCGTTGGAGACGTAGTAT
CGACCGCCCTGTGCGACGAGACTGGCGATGCACTGGGGCTATTCGTCGCC
CGTCTTGCGCTGACCGAGGATTTCGAGCAGGCGCAGGTGAAGCTCGTTGA
GGGCTGCGTATGCCACCCGCACCCGCTCTGCAGAGAGATCTGGCTCAGGG
CTTTCAAAGGTGAAGCTCGTTGAGGGCTGCGTATGCCACCCGCACCCGCT
CTGCAGAGAGATCTGGCTCAGGGCTTTCAAAGTTTTCCTTAGAATGTGCG
ATCCCACAGCACAGTCGAGCTGCGTTCAAACTTTCACGGACGCCGCGATA
GATCCTCGACTTAGTTCCCGTCACAGGCGCCGCCTAGCCCGGGCGCTGTC
TGCGTGCACAGCCCCGAGAGCGCTGGACGCAGCAGCCTACGGTCGCCTTC
GTCAAATCTTGCTATCCCGACTACGAGAGGAACATGATAATATTTCGGAG
GGTGGTAATGTCGCGGCCATTGAAGTCAGTGATGAGTTTGCCCGCGACCC
CGCTTCTGCCGTTCTTGGTAGCAAGAGCACCCGTGAGTTGAGGAGAGCAT
GCGCCCTAGAACTCCTCAGCGGCGTGTCGATGCGATCATTTGCAAGCGAC
GATGAGGTGCTCAGCGCTTCCAGCGCCGCCCTCGCCGAGGCCGCCGTAGT
CGCCGGGCTACGGGACGCGGGCGAAAAATCTTGCGTACTTTCCGCGAGCG
ATGCAGGAAGCAGCAACAGCAGCAGAAAGCGCAACCGTGAAGAGAGTCTG
GCAGCGGCTGCGAAGTTCCTCGCGGTGAGCTCGGGGTCGGGGAACCTTGC
CCCGCGGAAAACGGGACATGTACAAGGGAGATCGATCGCCAAGACGGAGG
AGGCGACAAGGGTAGCAGGAAGGGCGCTGGGGATTGCGTTGACCGGAGAT
GGATCGACGTTCTTAACGATGACGCACGTGTCCGGACATCCGCTGGCCGC
GATCACCGTTTTTCCTTAGAATGTGCGATCCCACAGCACAGTCGAGCTGC
GTTCAAACTTTCACGGACGCCGCGATAGATCCTCGACTTAGTTCCCGTCA
CAGGCGCCGCCTAGCCCGGGCGCTGTCTGCGTGCACAGCCCCGAGAGCGC
TGGACGCAGCAGCCTACGGTCGCCTTCGTCAAATCTTGCTATCCCGACTA
CGAGAGGAACATGATAATATTTCGGAGGGTGGTAATGTCGCGGCCATTGA
AGTCAGTGATGAGTTTGCCCGCGACCCCGCTTCTGCCGTTCTTGGTAGCA
AGAGCACCCGTGAGTTGAGGAGAGCATGCGCCCTAGAACTCCTCAGCGGC
GTGTCGATGCGATCATTTGCAAGCGACGATGAGGTGCTCAGCGCTTCCAG
CGCCGCCCTCGCCGAGGCCGCCGTAGTCGCCGGGCTACGGGACGCGGGCG
AAAAATCTTGCGTACTTTCCGCGAGCGATGCAGGAAGCAGCAACAGCAGC
AGAAAGCGCAACCGTGAAGAGAGTCTGGCAGCGGCTGCGAAGTTCCTCGC
GGTGAGCTCGGGGTCGGGGAACCTTGCCCCGCGGAAAACGGGACATGTAC
AAGGGAGATCGATCGCCAAGACGGAGGAGGCGACAAGGGTAGCAGGAAGG
GCGCTGGGGATTGCGTTGACCGGAGATGGATCGACGTTCTTAACGATGAC
GCACGTGTCCGGACATCCGCTGGCCGCGATCACCGTGCTAATGGCGAAAA
TTGACCCAAGCAAACTGCCTCGGCTGTGTTCCTTGATAGTCGAGAGTGCA
GAGGACGGTAGGGTAAACGGTGAAGGACTGCTGGCGCTAGCGGAAGGTTT
GTCGTCCATGGGCCGCCAATCGTTTCCATCGAACCCGGCTAATGGCGAAA
ATTGACCCAAGCAAACTGCCTCGGCTGTGTTCCTTGATAGTCGAGAGTGC
AGAGGACGGTAGGGTAAACGGTGAAGGACTGCTGGCGCTAGCGGAAGGTT
TGTCGTCCATGGGCCGCCAATCGTTTCCATCGAACCCGGTCGACGCAACT
ATATGGGAAGCAACTATGAAGAACGGCTTCGGGCTGCTGTTCGACTGTGG
TCTGTGGCCTGTTGCCACAGTAGCGATGCAGGCGCTCGAGGTCGACGCAA
CTATATGGGAAGCAACTATGAAGAACGGCTTCGGGCTGCTGTTCGACTGT
GGTCTGTGGCCTGTTGCCACAGTAGCGATGCAGGCGCTCGAGGAGATAGC
GAGACACGCCGACCCTCGAACAGCCGAGCTCCTTCCGCGCCTTTTACCGA
GGAGCCGCTTGTCATCATTCAAAGCGCGCTTATCGAAAAAAGTGGCTACC
CTGGAGGGTGGGAAGCTAATTGAGGAGATAGCGAGACACGCCGACCCTCG
AACAGCCGAGCTCCTTCCGCGCCTTTTACCGAGGAGCCGCTTGTCATCAT
TCAAAGCGCGCTTATCGAAAAAAGTGGCTACCCTGGAGGGTGGGAAGCTA
ATTGAGCTTGAAAGGCTTCGCAAACGCGGATGGGCAGAGTGGGAGCTCTT
CGCGTCGGCAGCTTCAGCGTTTGCTGAAGAAACAAGAACGCGATCCTCAC
GTAGTCCCACGAGTGCGAGCATTCATCCGTCGGGGCAGGATCGTCAGCTT
GAAAGGCTTCGCAAACGCGGATGGGCAGAGTGGGAGCTCTTCGCGTCGGC
AGCTTCAGCGTTTGCTGAAGAAACAAGAACGCGATCCTCACGTAGTCCCA
CGAGTGCGAGCATTCATCCGTCGGGGCAGGATCGTCAGGTGGTGCTGAGA
AAGGGGGGAAACTTGAGCGCCATGGCGGGGCTGCTGTCTAGCACCATTGT
AGGCATAGAGCTGCAGAGCGACCAGGCGGGAGGTGGGGTGCGCATTACTC
TGCGTGGGAAGTAAGTGGTGCTGAGAAAGGGGGGAAACTTGAGCGCCATG
GCGGGGCTGCTGTCTAGCACCATTGTAGGCATAGAGCTGCAGAGCGACCA
GGCGGGAGGTGGGGTGCGCATTACTCTGCGTGGGAAGTAA
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