prot_H-elongata_contig10104.97.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig10104.97.1
Unique Nameprot_H-elongata_contig10104.97.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length765
Homology
BLAST of mRNA_H-elongata_contig10104.97.1 vs. uniprot
Match: D8LJB2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJB2_ECTSI)

HSP 1 Score: 359 bits (922), Expect = 1.600e-106
Identity = 317/855 (37.08%), Postives = 415/855 (48.54%), Query Frame = 0
Query:    1 MAGLLRYLGPECPPLERRRAYELLAKTAAVVYPGVIALRRAERNVPASAAGAIRASSLSAVVAERLYPQTTEAFLSICGPPPCHSHRAVS-----NSSRQTPTASND------------------------------TCRCFEQPDPTEKGEGGRLPSRRGHDPWESLEALRPARPQGGSRSHGTAND-----SRVRAVNAALD--RNGGNEGDGNCLPGADPLGAVLLLCEALRSEGKLYGVVTA-------RLLECCTWISDYLAFLFQKWVETATVENGRDLSARGSADGDDFVGDVVSTALCDETGDALGLFVARLALTEDFEQAQVKLVEGCVCHPHPLCREIWLRAFKVFLRMCDPTAQSSCVQTFTDAAIDPRLSSRHRRRLARALSA-CTA-----------------------PRALDAAAYGRLRQILLSRLREEHDNISEGGNVAAIEVSDEFARDPASAVLGSKSTRELRRACALELLSGV-SMRSFAS------DDEVLSASSAALAE-AAVVAGLRDAGEKSCVLSASDAGSSNSSRKRNREESLAAAAKFLAVS-SGSGNLAPRKTGHVQGRSIAKTEEATRVAGRALGIALTGDGSTFLTMTHVSGHPLAAITVLMAKIDPSKLPRLCSLIVESAEDGRVNGEGLLALAEGLSSMG-RQSFPSNPVDATIWEATMKNGFGLLFDCG-LWPVATVAMQALEE--------IARHADPRTAELLPRLLPRSRLSSFKARLSKKVATLEGGKLIELERLRKRGWAEWELFASAASAFAEETRTRSSRSPTSASIHPSGQDRQVVLRKGGNLSAMAGLLSSTIVGIELQSDQAGGGVRITLRG 763
            MA LLR+LGPECPP ERR A+ L AK  A VYPG++A  RA   V   AA A        V    +YP+  EAF+S    PPC      +     N SR  PT+S                                +CRC+E          G L  RR HDPWE+LEALRP   +          D     SR    +AA D  R+  +E + +     DPLGAVLLLCE LR   + YG   A       R   CC W+ D+LA LF  WV++A                          AL  E    LG+FV R A+  +F++AQV+L+EGC CHPHP+CRE+W+ A KVFL  CD  AQ +C+Q+ T+AA+DPR+S R RRRL RAL+A C A                       P  L  A  G L Q  LSRLR E  +    G+ ++I  S                      ACAL+LL  + S RSF+       DDE L+A+SA+ A  +A  A L  +     V      GSS   R+R  E++L A A+FLA         A      + G +      A R   R LG  LT  G +      +S   L+AIT L+A+ DP +LP+LCS++   A DGRV GE +LALAEGLSS+G RQ  PS      I       GF  L +C   W   T+    +          +AR  DP    LLPR +P  RL++FK RL ++   L+GG  I+LE +R+RG AE  + ++AA A A +  T  S           GQ RQ+VL++GG+LSA+AGLL++T+ GI L S++ GGGV +TL+G
Sbjct:  267 MACLLRHLGPECPPRERRAAFRLYAKATASVYPGLLASLRARDFVGDDAATA------GGVAGCIIYPKAVEAFVSTTDEPPCCQSGVSATGRGENGSRSPPTSSRKVGPLVDAGGSSCAAFSSAGGVAERERNLRPSCRCYEGTTT------GPLSGRR-HDPWEALEALRPTPNRXXXXXXXXIADPSRTSSRSSDASAATDDSRDAVHEPESS----VDPLGAVLLLCEFLR---RGYGTAPAAGGARGPRREACCAWVLDHLAALFPGWVDSAAXXXXXXXXXXX--------------ALTGEVSATLGVFVCRRAMDGEFQEAQVQLIEGCSCHPHPVCREVWVGALKVFLGRCDSAAQEACIQSLTNAALDPRVSRRCRRRLGRALAAVCVAMTTGVPLADSGSPTGGPSASAAVPLLLPRARAG-LFQACLSRLRGEQLDEDSSGD-SSIRAS--------GGRXXXXXXXXXXXACALDLLRALPSWRSFSGVNGGGHDDEELTAASASFARTSATTADLLRSEAARGVRGEHSPGSSL--RQREEEDNLVAGARFLAARPQQERKQAAGAEVDMGGEAEGGLGAAAREVARELGGMLTSSGLS----GGLSERALSAITRLVAREDPDRLPQLCSVVAREAVDGRVGGEAVLALAEGLSSVGQRQPLPSKGRAGNI-------GFNRLEECPPRWVRGTLRFSLVARRHGSHGNAVARCVDPSITALLPRQIPEHRLAAFKGRLGRRTVYLDGGGPIKLEEIRERGLAETRVLSAAAVALAAKRGTTESE----------GQTRQIVLKEGGDLSALAGLLANTVTGIRLLSEREGGGVCLTLKG 1054          
BLAST of mRNA_H-elongata_contig10104.97.1 vs. uniprot
Match: A0A6H5JIM5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM5_9PHAE)

HSP 1 Score: 208 bits (530), Expect = 2.920e-53
Identity = 206/566 (36.40%), Postives = 260/566 (45.94%), Query Frame = 0
Query:    1 MAGLLRYLGPECPPLERRRAYELLAKTAAVVYPGVIALRRAERNVPASAAGAIRASSLSAVVAERLYPQTTEAFLSICGPPPCHSHRAVS-----NSSRQTPTASND------------------------------TCRCFEQPDPTEKGEGGRLPSRRGHDPWESLEALRPA-RPQGGSRSHGTANDSRVRAVNAALDRNGGNEGDGNCLPGADPLGAVLLLCEALRSEGKLYGVVTA-------RLLECCTWISDYLAFLFQKWVETATVENGRDLSARGSADGDDFVGDVVSTALCDETGDALGLFVARLALTEDFEQAQVKLVEGCVCHPHPLCREIWLRAFK----VFLRMCDPTAQSSCVQTFTDAAIDPRLSSRHRRRLARALSA-CTA----------------PRALDAA------AYGRLRQILLSRLR-EEHDNISEGGNVAAIEVSDEFARDPASAVLGSKSTRELRRACALELLSGV-SMRSFAS------DDEVLSASSAALAE-AAVVAGLRDAGEKSCVLSASDAGSSNSSRKRNREESLAAAAKFLAV 487
            MA LLR+LGPEC P +RR A+ L AK  A VYPG++A  RA   V   A      ++   V    +YP+  EAFLS    PPC      +     N+SR  PT S                                +CRC+E          G L  +R HDPWE+LEALRP  RP     +  T   SR    + A D +     D    P  DPLGAVLLLCE LR   + YG   A       R   CC W+ D+LA LF  WV++A    G+     G A          S AL  E    LG+ V R A+  +F++AQV+L+EGC CHPHP+CRE+W+ A K       + CDP AQ  C+Q+  +AA+DPR+S R RRRL RAL+A C A                P A  AA      A   L Q  LSRLR E+ D  S G         D   R  AS             ACAL+LL  + S RSF+       DD+ L+ +S + A  +A  A L  +     V      GSS   R+R  EE+L A A+FLA 
Sbjct:  261 MACLLRHLGPECRPRKRREAFRLYAKATASVYPGLLASLRARDVVGDDA------TTTGGVAGCIIYPKAVEAFLSTTDEPPCCQSGVSAIGHGENASRSPPTNSRKASPLVDAGGSSCAAFSSAGRVAERERNLRRSCRCYEG------ATTGPLSGQR-HDPWEALEALRPPNRPP--LITDPTRTSSRSSDSSTATDDSRDAAHDLQSSPAVDPLGAVLLLCEFLR---RGYGAAPAAGGARGPRRETCCAWVLDHLAALFPGWVDSAAGGGGQ-----GGA----------SAALAGEVSATLGVVVCRRAMDGEFQEAQVQLIEGCSCHPHPVCREVWVGALKGKTDAGWKECDPAAQEVCIQSLANAALDPRVSPRCRRRLGRALAAVCVATTTGAPPTDSGSPAGGPTASAAAPLLLPRARAGLFQACLSRLRGEQLDGDSSG---------DSSIR--ASGXXXXXXXXXXXXACALDLLRALPSCRSFSGVHGGSEDDKELAVASVSFARTSATTADLLRSEAARGVGGEPSPGSSL--RQREEEENLVAGARFLAA 780          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10104.97.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LJB2_ECTSI1.600e-10637.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JIM5_9PHAE2.920e-5336.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 275..652

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig10104contigH-elongata_contig10104:2082..7561 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig10104.97.1mRNA_H-elongata_contig10104.97.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig10104 155..7918 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig10104.97.1 ID=prot_H-elongata_contig10104.97.1|Name=mRNA_H-elongata_contig10104.97.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=765bp
MAGLLRYLGPECPPLERRRAYELLAKTAAVVYPGVIALRRAERNVPASAA
GAIRASSLSAVVAERLYPQTTEAFLSICGPPPCHSHRAVSNSSRQTPTAS
NDTCRCFEQPDPTEKGEGGRLPSRRGHDPWESLEALRPARPQGGSRSHGT
ANDSRVRAVNAALDRNGGNEGDGNCLPGADPLGAVLLLCEALRSEGKLYG
VVTARLLECCTWISDYLAFLFQKWVETATVENGRDLSARGSADGDDFVGD
VVSTALCDETGDALGLFVARLALTEDFEQAQVKLVEGCVCHPHPLCREIW
LRAFKVFLRMCDPTAQSSCVQTFTDAAIDPRLSSRHRRRLARALSACTAP
RALDAAAYGRLRQILLSRLREEHDNISEGGNVAAIEVSDEFARDPASAVL
GSKSTRELRRACALELLSGVSMRSFASDDEVLSASSAALAEAAVVAGLRD
AGEKSCVLSASDAGSSNSSRKRNREESLAAAAKFLAVSSGSGNLAPRKTG
HVQGRSIAKTEEATRVAGRALGIALTGDGSTFLTMTHVSGHPLAAITVLM
AKIDPSKLPRLCSLIVESAEDGRVNGEGLLALAEGLSSMGRQSFPSNPVD
ATIWEATMKNGFGLLFDCGLWPVATVAMQALEEIARHADPRTAELLPRLL
PRSRLSSFKARLSKKVATLEGGKLIELERLRKRGWAEWELFASAASAFAE
ETRTRSSRSPTSASIHPSGQDRQVVLRKGGNLSAMAGLLSSTIVGIELQS
DQAGGGVRITLRGK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold