mRNA_H-elongata_contig100962.89.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_H-elongata_contig100962.89.1
Unique Name	mRNA_H-elongata_contig100962.89.1
Type	mRNA
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig100962.89.1	prot_H-elongata_contig100962.89.1	Himanthalia elongata Himel1 dioecious	polypeptide	H-elongata_contig100962 753..2002 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622929550.844014-CDS-H-elongata_contig100962:752..895	1622929550.844014-CDS-H-elongata_contig100962:752..895	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig100962 753..895 -
1691679065.7344937-CDS-H-elongata_contig100962:752..895	1691679065.7344937-CDS-H-elongata_contig100962:752..895	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig100962 753..895 -
1622929550.8634665-CDS-H-elongata_contig100962:1330..1424	1622929550.8634665-CDS-H-elongata_contig100962:1330..1424	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig100962 1331..1424 -
1691679065.7474422-CDS-H-elongata_contig100962:1330..1424	1691679065.7474422-CDS-H-elongata_contig100962:1330..1424	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig100962 1331..1424 -
1622929550.8786306-CDS-H-elongata_contig100962:1954..2002	1622929550.8786306-CDS-H-elongata_contig100962:1954..2002	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig100962 1955..2002 -
1691679065.7561336-CDS-H-elongata_contig100962:1954..2002	1691679065.7561336-CDS-H-elongata_contig100962:1954..2002	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig100962 1955..2002 -

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622929550.8925314-UTR-H-elongata_contig100962:2002..2020	1622929550.8925314-UTR-H-elongata_contig100962:2002..2020	Himanthalia elongata Himel1 dioecious	UTR	H-elongata_contig100962 2003..2020 -
1691679065.7655416-UTR-H-elongata_contig100962:2002..2020	1691679065.7655416-UTR-H-elongata_contig100962:2002..2020	Himanthalia elongata Himel1 dioecious	UTR	H-elongata_contig100962 2003..2020 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at H-elongata_contig100962:753..2020-
coding sequence from alignment at H-elongata_contig100962:753..2020-

protein sequence of mRNA_H-elongata_contig100962.89.1

>prot_H-elongata_contig100962.89.1 ID=prot_H-elongata_contig100962.89.1|Name=mRNA_H-elongata_contig100962.89.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=95bp
MAVFEASTRAEQTAEQCKKSAVDAAVREIARDREAFAEGRREALKRIGEL
EDTLEIALRAAGGVHKQLMGLGRSCEDLGKTSVHLSVAAQEAPAQ

mRNA from alignment at H-elongata_contig100962:753..2020-

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_H-elongata_contig100962.89.1 ID=mRNA_H-elongata_contig100962.89.1|Name=mRNA_H-elongata_contig100962.89.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1268bp|location=Sequence derived from alignment at H-elongata_contig100962:753..2020- (Himanthalia elongata Himel1 dioecious)
CAGGTTGACGCCCTCCGGATGGCGGTGTTCGAGGCTAGCACCCGTGCGGA
ACAGACAGCTGAGCAGGTGGGAGAGTGTATAGGCCCACGAGGGATTATAG
TCGGCGTCGGTGCCCCGTGTTTTGGTTGGAGGCGTGAATCGGGGCACCGT
CTAGGAGACAAGCACTAATGAGGATATAAGTTCAATAGGTAGATACGCTG
GAGAAAGCACGTTCTGTTTTGTTTCTGTGACGTTGGAGTGACTAATGGCT
TAGAGGCGCACCCAGGAAAATCAATTTAAATATATTTTCGGTCCCATAAG
GGTGGGTATTAGCGGGGTTACAAAAGTTTAAATTCCNNNNNNNNNNTATA
TTTAAATCGGGCTCTGATTGGACGAAGACTATGCGTTATTTAGCTTTCTA
CCAATCAGAGCCCGATTTTAATTTAAATCGGCTGGAAATTTTAATTTTTG
TATTTCGATAAGACCCGGCCTAACGCCGTCAGCAAACTGCGCCAGAAGCT
AAAGTATCTCGCTATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGCTGG
GAACGACAACGCCGACAATGACACTGGTATCGGCATCGGCGACCAGTGCA
AGAAAAGCGCCGTAGACGCCGCCGTGCGGGAGATCGCGCGTGACCGTGAG
GCTTTTGCGGAGGGCAGACGAGAAGCCCTCAAACGAATAGGTAAGGCGAC
TCGGCCCGACCATTCAGCTCACCGTAACCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCACCCCCCCCCTTCGTCCCCGCCCCGCCGTCCAGCCCCCCT
GGGGCGCGGTCAAGACGAGCGCCGCGTTNNNNNNNNNNCCCATTTCGGGC
ACGCTACCCCCCCCCCCCCCTCTCACCCCATGATGCAGTCCATCCGATTT
GCCTCGGCCTCGTTTGGAAACCCTTCGGTGGTGATCAAACAGGGCGCGGA
TTTAATGTCTTGATACAGACGACGACGATGGATGTCACGGTGTGTTCGGT
ACCACTTCTACCTTCCCCTGTCACCGAGGCATATTGTCAGACCATTGGAC
GAACCACCAGAAGACGAGTAGCGCTCTTTTCCGTTCCGTGCCGGACATTT
CTGTCAAAATTTCGCTGGTCCGAAGGAGAACTCGAGGATACCCTGGAGAT
CGCTCTGAGAGCGGCGGGCGGGGTGCACAAGCAGCTTATGGGGCTCGGCC
GGTCCTGCGAAGACCTGGGCAAGACCAGCGTTCACCTCTCCGTTGCGGCA
CAGGAGGCGCCCGCTCAG

Coding sequence (CDS) from alignment at H-elongata_contig100962:753..2020-

>mRNA_H-elongata_contig100962.89.1 ID=mRNA_H-elongata_contig100962.89.1|Name=mRNA_H-elongata_contig100962.89.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=570bp|location=Sequence derived from alignment at H-elongata_contig100962:753..2020- (Himanthalia elongata Himel1 dioecious)
ATGGCGGTGTTCGAGGCTAGCACCCGTGCGGAACAGACAGCTGAGCAGAT
GGCGGTGTTCGAGGCTAGCACCCGTGCGGAACAGACAGCTGAGCAGTGCA
AGAAAAGCGCCGTAGACGCCGCCGTGCGGGAGATCGCGCGTGACCGTGAG
GCTTTTGCGGAGGGCAGACGAGAAGCCCTCAAACGAATAGTGCAAGAAAA
GCGCCGTAGACGCCGCCGTGCGGGAGATCGCGCGTGACCGTGAGGCTTTT
GCGGAGGGCAGACGAGAAGCCCTCAAACGAATAGGAGAACTCGAGGATAC
CCTGGAGATCGCTCTGAGAGCGGCGGGCGGGGTGCACAAGCAGCTTATGG
GGCTCGGCCGGTCCTGCGAAGACCTGGGCAAGACCAGCGTTCACCTCTCC
GTTGCGGCACAGGAGGCGCCCGCTCAGGAGAACTCGAGGATACCCTGGAG
ATCGCTCTGAGAGCGGCGGGCGGGGTGCACAAGCAGCTTATGGGGCTCGG
CCGGTCCTGCGAAGACCTGGGCAAGACCAGCGTTCACCTCTCCGTTGCGG
CACAGGAGGCGCCCGCTCAG

mRNA_H-elongata_contig100962.89.1 (mRNA) Himanthalia elongata Himel1 dioecious

ZOOM

x 1

POSITION

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