prot_H-elongata_contig100962.89.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig100962.89.1
Unique Nameprot_H-elongata_contig100962.89.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length95
Homology
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BLAST of mRNA_H-elongata_contig100962.89.1 vs. uniprot
Match: D8LDF6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDF6_ECTSI)

HSP 1 Score: 139 bits (350), Expect = 3.270e-37
Identity = 81/111 (72.97%), Postives = 90/111 (81.08%), Query Frame = 0 
Query:    1 MAVFEASTRAEQTAEQC----------------KKSAVDAAVREIARDREAFAEGRREALKRIGELEDTLEIALRAAGGVHKQLMGLGRSCEDLGKTSVHLSVAAQEAPAQ 95
            MAVFEASTRAEQTAEQ                 K+ AV+AAVREIA+DREAFAEGRREA+KRIGELED LEIAL+AAGGVH++L+ LG SCEDLGKTSVHLSVAAQEAPA+
Sbjct:  105 MAVFEASTRAEQTAEQLIKDSASFVHRGVLLQYKRDAVEAAVREIAQDREAFAEGRREAVKRIGELEDALEIALKAAGGVHRKLLELGLSCEDLGKTSVHLSVAAQEAPAE 215
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig100962.89.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LDF6_ECTSI3.270e-3772.97Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 40..60

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig100962contigH-elongata_contig100962:753..2002 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig100962.89.1mRNA_H-elongata_contig100962.89.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig100962 753..2020 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig100962.89.1 ID=prot_H-elongata_contig100962.89.1|Name=mRNA_H-elongata_contig100962.89.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=95bp
MAVFEASTRAEQTAEQCKKSAVDAAVREIARDREAFAEGRREALKRIGEL
EDTLEIALRAAGGVHKQLMGLGRSCEDLGKTSVHLSVAAQEAPAQ
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