mRNA_H-elongata_contig100959.87.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig100959.87.1
Unique NamemRNA_H-elongata_contig100959.87.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig100959.87.1 vs. uniprot
Match: D7FPF8_ECTSI (DNA-directed RNA polymerases I and III subunit RPAC1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPF8_ECTSI)

HSP 1 Score: 282 bits (721), Expect = 8.520e-93
Identity = 132/151 (87.42%), Postives = 140/151 (92.72%), Query Frame = 1
Query:    1 PTEFNTCVFKLEVKNPTRPEDMPDPLPKGTSLAPGPRRTMNVFSGAMEWCPHGNQVERFEQDGGLRPVHDDILIAKLRPGQEIIAELHCRKGIGKDHAKFSPVATASYRLLPVVSLKHEIEDEEAEELVAKCPLNVFDIEDLGGGRKRAKV 453
            PTEFNTCVFKLEVKNP  P DMPDP+P GTS A GPRRTMNVFSGAMEWCPHG+QVERFE +GGLRPVHDDILIAKLRPGQEI+AE+HCRKGIGKDHAKFSPVATASYRLLPVV+LK E+E +EAEELVAKCPLNVFDIEDLGG  KRAKV
Sbjct:  132 PTEFNTCVFKLEVKNPADPADMPDPMPTGTSYAAGPRRTMNVFSGAMEWCPHGDQVERFEGEGGLRPVHDDILIAKLRPGQEIVAEMHCRKGIGKDHAKFSPVATASYRLLPVVTLKEEVEGQEAEELVAKCPLNVFDIEDLGGAGKRAKV 282          
BLAST of mRNA_H-elongata_contig100959.87.1 vs. uniprot
Match: A0A6H5JLW5_9PHAE (DNA-directed RNA polymerases I and III subunit RPAC1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLW5_9PHAE)

HSP 1 Score: 204 bits (519), Expect = 2.990e-62
Identity = 95/107 (88.79%), Postives = 102/107 (95.33%), Query Frame = 1
Query:  133 GAMEWCPHGNQVERFEQDGGLRPVHDDILIAKLRPGQEIIAELHCRKGIGKDHAKFSPVATASYRLLPVVSLKHEIEDEEAEELVAKCPLNVFDIEDLGGGRKRAKV 453
            GAMEWCPHG+QVERFE +GGLRPVHDDILIAKLRPGQEI+AE+HCRKGIGKDHAKFSPVATASYRLLPVV+LK E+E +EAEELVAKCPLNVFDIEDLGG  KRAKV
Sbjct:  178 GAMEWCPHGDQVERFEGEGGLRPVHDDILIAKLRPGQEIVAEMHCRKGIGKDHAKFSPVATASYRLLPVVTLKQEVEGQEAEELVAKCPLNVFDIEDLGGAGKRAKV 284          
BLAST of mRNA_H-elongata_contig100959.87.1 vs. uniprot
Match: A0A0P1AUD4_PLAHL (DNA-directed RNA polymerases I and III subunit RPAC1 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AUD4_PLAHL)

HSP 1 Score: 156 bits (395), Expect = 7.070e-44
Identity = 82/143 (57.34%), Postives = 96/143 (67.13%), Query Frame = 1
Query:    4 TEFNTCVFKLEVKNPTRPEDMPDPLPKGTSLAPGPRRTMNVFSGAMEWCPHGNQVERFEQDGGLRPVHDDILIAKLRPGQEIIAELHCRKGIGKDHAKFSPVATASYRLLPVVSLKHEIEDEEAEELVAKCPLNVFDIEDLGG 432
            T+ NT VFKL+V     PE   DP     S         +V+S  +EW P GNQ ERF   G +RPVHDDILIAKLRPGQ +  E HCRKGIGKDHAKFSPVATASYRL+P V L  +IE  +A  L+  CP+N+FDIED+GG
Sbjct:  121 TDENTIVFKLDVTCKFDPEHPKDPTKAIFS---------SVYSRDLEWVPQGNQEERF---GLIRPVHDDILIAKLRPGQSLALEAHCRKGIGKDHAKFSPVATASYRLMPKVELSEKIEGADAVSLMENCPVNLFDIEDVGG 251          
BLAST of mRNA_H-elongata_contig100959.87.1 vs. uniprot
Match: D0NVB2_PHYIT (DNA-directed RNA polymerases I and III subunit RPAC1 n=6 Tax=Peronosporaceae TaxID=4777 RepID=D0NVB2_PHYIT)

HSP 1 Score: 153 bits (386), Expect = 1.380e-42
Identity = 78/143 (54.55%), Postives = 96/143 (67.13%), Query Frame = 1
Query:    4 TEFNTCVFKLEVKNPTRPEDMPDPLPKGTSLAPGPRRTMNVFSGAMEWCPHGNQVERFEQDGGLRPVHDDILIAKLRPGQEIIAELHCRKGIGKDHAKFSPVATASYRLLPVVSLKHEIEDEEAEELVAKCPLNVFDIEDLGG 432
            T+ NT VFKL+V     PE   DP     S         +V+S  +EW P GNQ ERF   G +RPVH+DIL+AKLRPGQ I  E HCRKG+GKDHAKFSPVATASYRL+P V L  ++E  +A+ LV +C + +FDIED+GG
Sbjct:  117 TDENTIVFKLDVTCKFDPEHPKDPTKAIHS---------SVYSRDLEWVPQGNQEERF---GSIRPVHEDILMAKLRPGQSIALEAHCRKGVGKDHAKFSPVATASYRLMPKVELMEKVEGTDAKRLVEECQIGLFDIEDIGG 247          
BLAST of mRNA_H-elongata_contig100959.87.1 vs. uniprot
Match: A0A6B2LAX2_9EUKA (DNA-directed RNA polymerases I and III subunit RPAC1 n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LAX2_9EUKA)

HSP 1 Score: 151 bits (382), Expect = 1.800e-42
Identity = 82/153 (53.59%), Postives = 101/153 (66.01%), Query Frame = 1
Query:    4 TEFNTCVFKLEVKNPTRP---EDMPDPLPKGTSLAPGPRRTMNVFSGAMEWCPHGNQVERFEQDGGLRPVHDDILIAKLRPGQEIIAELHCRKGIGKDHAKFSPVATASYRLLPVVSLKHEIEDEEAEELVAKCPLNVFDIEDLGGGRKRAKV 453
            T+ NT  F L+VK   +    E  PD L    S          V+SG M W PHG Q + F  +  ++PVHDDILIAKLRPGQEI     C KGIGKDHAKFSPVATA+YRLLP V++  ++  ++A+ LV KCP+NVFDIEDLGG +K+AKV
Sbjct:   77 TDKNTLEFTLKVKCEKKKDYKESYPDHLKYEHS---------KVYSGDMVWVPHGVQADEFVGENAIKPVHDDILIAKLRPGQEIDLSARCCKGIGKDHAKFSPVATATYRLLPEVTIIGDLTGDKADALVKKCPMNVFDIEDLGG-KKKAKV 219          
BLAST of mRNA_H-elongata_contig100959.87.1 vs. uniprot
Match: A0A662X4Y9_9STRA (DNA-directed RNA polymerases I and III subunit RPAC1 n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X4Y9_9STRA)

HSP 1 Score: 152 bits (384), Expect = 3.450e-42
Identity = 79/146 (54.11%), Postives = 98/146 (67.12%), Query Frame = 1
Query:    4 TEFNTCVFKLEVK---NPTRPEDMPDPLPKGTSLAPGPRRTMNVFSGAMEWCPHGNQVERFEQDGGLRPVHDDILIAKLRPGQEIIAELHCRKGIGKDHAKFSPVATASYRLLPVVSLKHEIEDEEAEELVAKCPLNVFDIEDLGG 432
            T+ NT VFKL+V    +P  P+D    L K    +        V+S  +EW P GNQ ERF   G +RPVH+DILIAKLRPGQ I  E HCRKG+GKDHAKFSPVATASYRL+P V L   +E ++A+ LV +C + +FDIED+GG
Sbjct:  126 TDENTIVFKLDVTCAYDPAHPKD----LSKAVHAS--------VYSRDLEWVPQGNQEERF---GAIRPVHEDILIAKLRPGQSIALEAHCRKGVGKDHAKFSPVATASYRLMPHVELTEAVEGDDAKRLVEECQMGLFDIEDMGG 256          
BLAST of mRNA_H-elongata_contig100959.87.1 vs. uniprot
Match: M4C0R7_HYAAE (RPOLD domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C0R7_HYAAE)

HSP 1 Score: 149 bits (375), Expect = 9.840e-42
Identity = 78/143 (54.55%), Postives = 95/143 (66.43%), Query Frame = 1
Query:    4 TEFNTCVFKLEVKNPTRPEDMPDPLPKGTSLAPGPRRTMNVFSGAMEWCPHGNQVERFEQDGGLRPVHDDILIAKLRPGQEIIAELHCRKGIGKDHAKFSPVATASYRLLPVVSLKHEIEDEEAEELVAKCPLNVFDIEDLGG 432
            T+ NT VFKL+V     P+ + DP    +S         +V+S  +EW P GNQ ERF   G +RPV +DILIAKLRPGQ I  E HCRKG+GKDHAKFSPVATASYRL+P V L  ++E   A+ LV +C   VFDIED+GG
Sbjct:   48 TDENTIVFKLDVTCKFDPDHLKDPTKALSS---------SVYSRDLEWVPQGNQEERF---GLIRPVSEDILIAKLRPGQSIALEAHCRKGVGKDHAKFSPVATASYRLMPKVELMEKVEGVNAKRLVDECRTGVFDIEDIGG 178          
BLAST of mRNA_H-elongata_contig100959.87.1 vs. uniprot
Match: H3GV90_PHYRM (DNA-directed RNA polymerases I and III subunit RPAC1 n=20 Tax=Phytophthora TaxID=4783 RepID=H3GV90_PHYRM)

HSP 1 Score: 151 bits (382), Expect = 1.230e-41
Identity = 78/143 (54.55%), Postives = 94/143 (65.73%), Query Frame = 1
Query:    4 TEFNTCVFKLEVKNPTRPEDMPDPLPKGTSLAPGPRRTMNVFSGAMEWCPHGNQVERFEQDGGLRPVHDDILIAKLRPGQEIIAELHCRKGIGKDHAKFSPVATASYRLLPVVSLKHEIEDEEAEELVAKCPLNVFDIEDLGG 432
            T+ NT VFKL+V     PE   DP     S         +V+S  +EW P GNQ ERF   G +RPVH+DILIAKLRPGQ I  E HCRKG+GKDHAKFSPVATASYRL+P V    ++E  +A+ LV  C + +FDIED+GG
Sbjct:  154 TDENTIVFKLDVTCKYDPEHPKDPTKAIHS---------SVYSRDLEWVPQGNQEERF---GSIRPVHEDILIAKLRPGQSIALEAHCRKGLGKDHAKFSPVATASYRLMPKVEFTEKVEGADAKHLVEDCQMGLFDIEDIGG 284          
BLAST of mRNA_H-elongata_contig100959.87.1 vs. uniprot
Match: A0A5D6XHD4_9STRA (DNA-directed RNA polymerases I and III subunit RPAC1 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XHD4_9STRA)

HSP 1 Score: 150 bits (380), Expect = 1.330e-41
Identity = 81/147 (55.10%), Postives = 96/147 (65.31%), Query Frame = 1
Query:    4 TEFNTCVFKLEVK---NPTRPEDMPDPLPKGTSLAPGPRRTMNVFSGAMEWCPHGNQVERFEQDGGLRPVHDDILIAKLRPGQEIIAELHCRKGIGKDHAKFSPVATASYRLLPVVSLKHEIEDEEAEELVA-KCPLNVFDIEDLGG 432
            T+ NT VFKL+V    +P  P+D    L              +V+S  +EW P GNQ ERF   G +RPVH+DILIAKLRPGQ I  E HCRKG+GKDHAKFSPVATASYRL+P + L   +   +A +LVA KC L VFDIEDLGG
Sbjct:  123 TDENTIVFKLDVTCRFDPAHPQDAAKAL------------HTSVYSRDLEWVPQGNQEERF---GAIRPVHEDILIAKLRPGQSIALEAHCRKGVGKDHAKFSPVATASYRLMPHIELAQPVTGADARQLVADKCALGVFDIEDLGG 254          
BLAST of mRNA_H-elongata_contig100959.87.1 vs. uniprot
Match: A0A836C8K2_9STRA (DNA-directed RNA polymerases I and III subunit RPAC1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8K2_9STRA)

HSP 1 Score: 150 bits (378), Expect = 3.820e-41
Identity = 79/139 (56.83%), Postives = 91/139 (65.47%), Query Frame = 1
Query:    7 EFNTCVFKLEVKNPTRPEDMPDPLPKGTSLAPGPRRTMNVFSGAMEWCPHGNQVERFEQDGGLRPVHDDILIAKLRPGQEIIAELHCRKGIGKDHAKFSPVATASYRLLPVVSLKHEIEDEEAEELVAKCPLNVFDIED 423
            E NT VF+L  +   RP D  DP          P  T  V+SG  EW P G Q ERF    GLRP+HDDIL+AKLR GQEI  E+HCRKG+GKDHAK+SPVATASYRL P ++L   +    A ELVA CP+NVFDIED
Sbjct:  151 ENNTVVFRLH-RRCVRPADA-DPA--------APPYTEGVYSGHFEWIPQGTQAERFPD--GLRPLHDDILLAKLRAGQEIALEMHCRKGVGKDHAKYSPVATASYRLAPRITLAQRVAGAAARELVAACPMNVFDIED 277          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig100959.87.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPF8_ECTSI8.520e-9387.42DNA-directed RNA polymerases I and III subunit RPA... [more]
A0A6H5JLW5_9PHAE2.990e-6288.79DNA-directed RNA polymerases I and III subunit RPA... [more]
A0A0P1AUD4_PLAHL7.070e-4457.34DNA-directed RNA polymerases I and III subunit RPA... [more]
D0NVB2_PHYIT1.380e-4254.55DNA-directed RNA polymerases I and III subunit RPA... [more]
A0A6B2LAX2_9EUKA1.800e-4253.59DNA-directed RNA polymerases I and III subunit RPA... [more]
A0A662X4Y9_9STRA3.450e-4254.11DNA-directed RNA polymerases I and III subunit RPA... [more]
M4C0R7_HYAAE9.840e-4254.55RPOLD domain-containing protein n=1 Tax=Hyaloperon... [more]
H3GV90_PHYRM1.230e-4154.55DNA-directed RNA polymerases I and III subunit RPA... [more]
A0A5D6XHD4_9STRA1.330e-4155.10DNA-directed RNA polymerases I and III subunit RPA... [more]
A0A836C8K2_9STRA3.820e-4156.83DNA-directed RNA polymerases I and III subunit RPA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig100959contigH-elongata_contig100959:659..2097 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score282.0
Seed ortholog evalue1.7e-73
Seed eggNOG ortholog2880.D7FPF8
Preferred namePOLR1C
KEGG rclassRC00055,RC00523,RC02795
KEGG koko:K03027,ko:K08059,ko:K13196,ko:K14163,ko:K18715
KEGG TC1.I.1
KEGG ReactionR00435,R00441,R00442,R00443,R03661,R05578
KEGG Pathwayko00230,ko00240,ko00860,ko00970,ko01100,ko01110,ko01120,ko03020,ko04612,ko04623,ko05169,map00230,map00240,map00860,map00970,map01100,map01110,map01120,map03020,map04612,map04623,map05169
KEGG ModuleM00121,M00181,M00182,M00359
GOsGO:0000428,GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005666,GO:0005730,GO:0005736,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006351,GO:0006352,GO:0006353,GO:0006360,GO:0006361,GO:0006363,GO:0006383,GO:0006399,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009304,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010604,GO:0010628,GO:0015074,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019222,GO:0019438,GO:0030880,GO:0031974,GO:0031981,GO:0032196,GO:0032774,GO:0032991,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0040029,GO:0042797,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044452,GO:0044464,GO:0045815,GO:0046483,GO:0048518,GO:0050789,GO:0055029,GO:0060255,GO:0061695,GO:0065007,GO:0070013,GO:0070893,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0098781,GO:0140098,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234
EggNOG free text desc.transcription by RNA polymerase I
EggNOG OGsCOG0202@1,KOG1521@2759
EC6.1.1.15,6.1.1.17
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01611,ko00000,ko00001,ko00002,ko01000,ko03016,ko03019,ko03021,ko03041
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionDNA-directed RNA polymerase, insert domain
Ec32 orthologEc-14_004750.1
Exons3
Model size467
Cds size465
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig100959.87.1prot_H-elongata_contig100959.87.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig100959 659..2097 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929550.5585787-CDS-H-elongata_contig100959:658..8651622929550.5585787-CDS-H-elongata_contig100959:658..865Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig100959 659..865 -
1691679065.602403-CDS-H-elongata_contig100959:658..8651691679065.602403-CDS-H-elongata_contig100959:658..865Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig100959 659..865 -
1622929550.578918-CDS-H-elongata_contig100959:1335..14621622929550.578918-CDS-H-elongata_contig100959:1335..1462Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig100959 1336..1462 -
1691679065.6126027-CDS-H-elongata_contig100959:1335..14621691679065.6126027-CDS-H-elongata_contig100959:1335..1462Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig100959 1336..1462 -
1622929550.5952241-CDS-H-elongata_contig100959:1966..20971622929550.5952241-CDS-H-elongata_contig100959:1966..2097Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig100959 1967..2097 -
1691679065.619859-CDS-H-elongata_contig100959:1966..20971691679065.619859-CDS-H-elongata_contig100959:1966..2097Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig100959 1967..2097 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig100959.87.1

>prot_H-elongata_contig100959.87.1 ID=prot_H-elongata_contig100959.87.1|Name=mRNA_H-elongata_contig100959.87.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=155bp
PTEFNTCVFKLEVKNPTRPEDMPDPLPKGTSLAPGPRRTMNVFSGAMEWC
PHGNQVERFEQDGGLRPVHDDILIAKLRPGQEIIAELHCRKGIGKDHAKF
SPVATASYRLLPVVSLKHEIEDEEAEELVAKCPLNVFDIEDLGGGRKRAK
VGGAR
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mRNA from alignment at H-elongata_contig100959:659..2097-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig100959.87.1 ID=mRNA_H-elongata_contig100959.87.1|Name=mRNA_H-elongata_contig100959.87.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1439bp|location=Sequence derived from alignment at H-elongata_contig100959:659..2097- (Himanthalia elongata Himel1 dioecious)
CCGACGGAGTTTAACACCTGCGTCTTCAAGTTAGAGGTGAAGAACCCCAC ACGCCCAGAGGACATGCCAGATCCGTTACCGAAGGGGACGAGCCTTGCCC CCGGTCCCCGACGCACCATGAACGTCTTCAGGTACAGTACTCTGGGAGAT AAACGTTGCCGGATGGGGAGGGAGGGGAAGGCAAGCTTTCGGTGCATCGT CAAGAGCTGCATAACCCCTCCCCCTTTCTTCTTCCTTGAGGCCTAATTTT CCACACAGAGCTAGCCCCTTGGCTTAACACTGACGAACGATCAACCAACG GCTCAAGTTTTGAGGTGGCGTCTTCTTTTCACGGCAATGATTGTTTCATT TTACGAGAACGCCGCTTTCCTCTGAAGAGTTACCCGAGAACGGGGTTCCG CTGGGGAAGAGATCCTCACGAGCCCCCCCCCTACCCACCCTAACACCCCC GCCGCTTTTTTATGAACGTGCGGCACAAACTATGGCATATTGTTGTTTTA TAACATTTAGTTTAGCTGTGTTGCTTTTTGTAAAACGTGTCTTACCGACT CCTATCATAGCTAGAGCATTAATCGTAGTTTTTCACATCGTGTGTTATGT TCTGTGTCCTGTAACATGTTTGGTGTTTGCTGAAGCGGTGCGATGGAGTG GTGTCCACACGGGAATCAGGTGGAGCGTTTCGAGCAGGATGGAGGGCTAC GGCCCGTGCACGATGACATCCTGATCGCCAAACTTCGGCCTGGGCAAGAG ATCATCGCCGAGGTACTTTTACGTCTTGCAAAGCTCGGGCCAACGTATTT CGTTAAGCGCGACGGCGCCGAAAGCTTTAAATTTGGAAGCGAGATCGTAG ACACCCCCTTTTTTTTGCCAAGCTCTGCCTCGGCGAAGTTTTAGCCATCA TTTTTTTCATTTTTTCTTTTTATTTTCTTCTAGTTGAGGCTGTGGTAGGT GCCTTTGTTCGCCCTAGACACGAGTACTGGCTCCGTGAAAATAAAATAAT GAGAGAAGCGTGTGTTCTGTCACTTAACGTATCTGGTTTGGTTTGAGAGA GTGATTGGTCGATGGCTGCTATTGGTTGATTGAAAACCTCGGCATTATTT TTACTTCCCTGCAGACCGACCGCCTTCCACGCGTTGTAACTCGCTTGTTT CGAGTCAGCGAATGTTTTTATTACTCTGCATGTGTGTGTATACCATCGTT TTTGATCGTGCGGACCCATTCGCGCCCTGCAGCTGCATTGCCGCAAGGGC ATTGGAAAAGATCACGCCAAGTTCTCCCCAGTGGCCACGGCGAGCTACCG CCTTCTTCCTGTGGTCTCACTCAAGCATGAGATAGAGGATGAGGAGGCCG AAGAGCTCGTGGCCAAGTGTCCGCTGAACGTTTTCGATATCGAGGATCTG GGAGGCGGAAGAAAGCGGGCGAAGGTTGGTGGGGCAAGG
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Coding sequence (CDS) from alignment at H-elongata_contig100959:659..2097-

>mRNA_H-elongata_contig100959.87.1 ID=mRNA_H-elongata_contig100959.87.1|Name=mRNA_H-elongata_contig100959.87.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=930bp|location=Sequence derived from alignment at H-elongata_contig100959:659..2097- (Himanthalia elongata Himel1 dioecious)
CCGACGGAGTTTAACACCTGCGTCTTCAAGTTAGAGGTGAAGAACCCCAC
ACGCCCAGAGGACATGCCAGATCCGTTACCGAAGGGGACGAGCCTTGCCC
CCGGTCCCCGACGCACCATGAACGTCTTCAGCCGACGGAGTTTAACACCT
GCGTCTTCAAGTTAGAGGTGAAGAACCCCACACGCCCAGAGGACATGCCA
GATCCGTTACCGAAGGGGACGAGCCTTGCCCCCGGTCCCCGACGCACCAT
GAACGTCTTCAGCGGTGCGATGGAGTGGTGTCCACACGGGAATCAGGTGG
AGCGTTTCGAGCAGGATGGAGGGCTACGGCCCGTGCACGATGACATCCTG
ATCGCCAAACTTCGGCCTGGGCAAGAGATCATCGCCGAGCGGTGCGATGG
AGTGGTGTCCACACGGGAATCAGGTGGAGCGTTTCGAGCAGGATGGAGGG
CTACGGCCCGTGCACGATGACATCCTGATCGCCAAACTTCGGCCTGGGCA
AGAGATCATCGCCGAGCTGCATTGCCGCAAGGGCATTGGAAAAGATCACG
CCAAGTTCTCCCCAGTGGCCACGGCGAGCTACCGCCTTCTTCCTGTGGTC
TCACTCAAGCATGAGATAGAGGATGAGGAGGCCGAAGAGCTCGTGGCCAA
GTGTCCGCTGAACGTTTTCGATATCGAGGATCTGGGAGGCGGAAGAAAGC
GGGCGAAGGTTGGTGGGGCAAGGCTGCATTGCCGCAAGGGCATTGGAAAA
GATCACGCCAAGTTCTCCCCAGTGGCCACGGCGAGCTACCGCCTTCTTCC
TGTGGTCTCACTCAAGCATGAGATAGAGGATGAGGAGGCCGAAGAGCTCG
TGGCCAAGTGTCCGCTGAACGTTTTCGATATCGAGGATCTGGGAGGCGGA
AGAAAGCGGGCGAAGGTTGGTGGGGCAAGG
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