prot_H-elongata_contig100959.87.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig100959.87.1 vs. uniprot
Match: D7FPF8_ECTSI (DNA-directed RNA polymerases I and III subunit RPAC1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPF8_ECTSI) HSP 1 Score: 282 bits (721), Expect = 8.520e-93 Identity = 132/151 (87.42%), Postives = 140/151 (92.72%), Query Frame = 0
Query: 1 PTEFNTCVFKLEVKNPTRPEDMPDPLPKGTSLAPGPRRTMNVFSGAMEWCPHGNQVERFEQDGGLRPVHDDILIAKLRPGQEIIAELHCRKGIGKDHAKFSPVATASYRLLPVVSLKHEIEDEEAEELVAKCPLNVFDIEDLGGGRKRAKV 151
PTEFNTCVFKLEVKNP P DMPDP+P GTS A GPRRTMNVFSGAMEWCPHG+QVERFE +GGLRPVHDDILIAKLRPGQEI+AE+HCRKGIGKDHAKFSPVATASYRLLPVV+LK E+E +EAEELVAKCPLNVFDIEDLGG KRAKV
Sbjct: 132 PTEFNTCVFKLEVKNPADPADMPDPMPTGTSYAAGPRRTMNVFSGAMEWCPHGDQVERFEGEGGLRPVHDDILIAKLRPGQEIVAEMHCRKGIGKDHAKFSPVATASYRLLPVVTLKEEVEGQEAEELVAKCPLNVFDIEDLGGAGKRAKV 282
BLAST of mRNA_H-elongata_contig100959.87.1 vs. uniprot
Match: A0A6H5JLW5_9PHAE (DNA-directed RNA polymerases I and III subunit RPAC1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLW5_9PHAE) HSP 1 Score: 204 bits (519), Expect = 2.990e-62 Identity = 95/107 (88.79%), Postives = 102/107 (95.33%), Query Frame = 0
Query: 45 GAMEWCPHGNQVERFEQDGGLRPVHDDILIAKLRPGQEIIAELHCRKGIGKDHAKFSPVATASYRLLPVVSLKHEIEDEEAEELVAKCPLNVFDIEDLGGGRKRAKV 151
GAMEWCPHG+QVERFE +GGLRPVHDDILIAKLRPGQEI+AE+HCRKGIGKDHAKFSPVATASYRLLPVV+LK E+E +EAEELVAKCPLNVFDIEDLGG KRAKV
Sbjct: 178 GAMEWCPHGDQVERFEGEGGLRPVHDDILIAKLRPGQEIVAEMHCRKGIGKDHAKFSPVATASYRLLPVVTLKQEVEGQEAEELVAKCPLNVFDIEDLGGAGKRAKV 284
BLAST of mRNA_H-elongata_contig100959.87.1 vs. uniprot
Match: A0A0P1AUD4_PLAHL (DNA-directed RNA polymerases I and III subunit RPAC1 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AUD4_PLAHL) HSP 1 Score: 156 bits (395), Expect = 7.070e-44 Identity = 82/143 (57.34%), Postives = 96/143 (67.13%), Query Frame = 0
Query: 2 TEFNTCVFKLEVKNPTRPEDMPDPLPKGTSLAPGPRRTMNVFSGAMEWCPHGNQVERFEQDGGLRPVHDDILIAKLRPGQEIIAELHCRKGIGKDHAKFSPVATASYRLLPVVSLKHEIEDEEAEELVAKCPLNVFDIEDLGG 144
T+ NT VFKL+V PE DP S +V+S +EW P GNQ ERF G +RPVHDDILIAKLRPGQ + E HCRKGIGKDHAKFSPVATASYRL+P V L +IE +A L+ CP+N+FDIED+GG
Sbjct: 121 TDENTIVFKLDVTCKFDPEHPKDPTKAIFS---------SVYSRDLEWVPQGNQEERF---GLIRPVHDDILIAKLRPGQSLALEAHCRKGIGKDHAKFSPVATASYRLMPKVELSEKIEGADAVSLMENCPVNLFDIEDVGG 251
BLAST of mRNA_H-elongata_contig100959.87.1 vs. uniprot
Match: D0NVB2_PHYIT (DNA-directed RNA polymerases I and III subunit RPAC1 n=6 Tax=Peronosporaceae TaxID=4777 RepID=D0NVB2_PHYIT) HSP 1 Score: 153 bits (386), Expect = 1.380e-42 Identity = 78/143 (54.55%), Postives = 96/143 (67.13%), Query Frame = 0
Query: 2 TEFNTCVFKLEVKNPTRPEDMPDPLPKGTSLAPGPRRTMNVFSGAMEWCPHGNQVERFEQDGGLRPVHDDILIAKLRPGQEIIAELHCRKGIGKDHAKFSPVATASYRLLPVVSLKHEIEDEEAEELVAKCPLNVFDIEDLGG 144
T+ NT VFKL+V PE DP S +V+S +EW P GNQ ERF G +RPVH+DIL+AKLRPGQ I E HCRKG+GKDHAKFSPVATASYRL+P V L ++E +A+ LV +C + +FDIED+GG
Sbjct: 117 TDENTIVFKLDVTCKFDPEHPKDPTKAIHS---------SVYSRDLEWVPQGNQEERF---GSIRPVHEDILMAKLRPGQSIALEAHCRKGVGKDHAKFSPVATASYRLMPKVELMEKVEGTDAKRLVEECQIGLFDIEDIGG 247
BLAST of mRNA_H-elongata_contig100959.87.1 vs. uniprot
Match: A0A6B2LAX2_9EUKA (DNA-directed RNA polymerases I and III subunit RPAC1 n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LAX2_9EUKA) HSP 1 Score: 151 bits (382), Expect = 1.800e-42 Identity = 82/153 (53.59%), Postives = 101/153 (66.01%), Query Frame = 0
Query: 2 TEFNTCVFKLEVKNPTRP---EDMPDPLPKGTSLAPGPRRTMNVFSGAMEWCPHGNQVERFEQDGGLRPVHDDILIAKLRPGQEIIAELHCRKGIGKDHAKFSPVATASYRLLPVVSLKHEIEDEEAEELVAKCPLNVFDIEDLGGGRKRAKV 151
T+ NT F L+VK + E PD L S V+SG M W PHG Q + F + ++PVHDDILIAKLRPGQEI C KGIGKDHAKFSPVATA+YRLLP V++ ++ ++A+ LV KCP+NVFDIEDLGG +K+AKV
Sbjct: 77 TDKNTLEFTLKVKCEKKKDYKESYPDHLKYEHS---------KVYSGDMVWVPHGVQADEFVGENAIKPVHDDILIAKLRPGQEIDLSARCCKGIGKDHAKFSPVATATYRLLPEVTIIGDLTGDKADALVKKCPMNVFDIEDLGG-KKKAKV 219
BLAST of mRNA_H-elongata_contig100959.87.1 vs. uniprot
Match: A0A662X4Y9_9STRA (DNA-directed RNA polymerases I and III subunit RPAC1 n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X4Y9_9STRA) HSP 1 Score: 152 bits (384), Expect = 3.450e-42 Identity = 79/146 (54.11%), Postives = 98/146 (67.12%), Query Frame = 0
Query: 2 TEFNTCVFKLEVK---NPTRPEDMPDPLPKGTSLAPGPRRTMNVFSGAMEWCPHGNQVERFEQDGGLRPVHDDILIAKLRPGQEIIAELHCRKGIGKDHAKFSPVATASYRLLPVVSLKHEIEDEEAEELVAKCPLNVFDIEDLGG 144
T+ NT VFKL+V +P P+D L K + V+S +EW P GNQ ERF G +RPVH+DILIAKLRPGQ I E HCRKG+GKDHAKFSPVATASYRL+P V L +E ++A+ LV +C + +FDIED+GG
Sbjct: 126 TDENTIVFKLDVTCAYDPAHPKD----LSKAVHAS--------VYSRDLEWVPQGNQEERF---GAIRPVHEDILIAKLRPGQSIALEAHCRKGVGKDHAKFSPVATASYRLMPHVELTEAVEGDDAKRLVEECQMGLFDIEDMGG 256
BLAST of mRNA_H-elongata_contig100959.87.1 vs. uniprot
Match: M4C0R7_HYAAE (RPOLD domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C0R7_HYAAE) HSP 1 Score: 149 bits (375), Expect = 9.840e-42 Identity = 78/143 (54.55%), Postives = 95/143 (66.43%), Query Frame = 0
Query: 2 TEFNTCVFKLEVKNPTRPEDMPDPLPKGTSLAPGPRRTMNVFSGAMEWCPHGNQVERFEQDGGLRPVHDDILIAKLRPGQEIIAELHCRKGIGKDHAKFSPVATASYRLLPVVSLKHEIEDEEAEELVAKCPLNVFDIEDLGG 144
T+ NT VFKL+V P+ + DP +S +V+S +EW P GNQ ERF G +RPV +DILIAKLRPGQ I E HCRKG+GKDHAKFSPVATASYRL+P V L ++E A+ LV +C VFDIED+GG
Sbjct: 48 TDENTIVFKLDVTCKFDPDHLKDPTKALSS---------SVYSRDLEWVPQGNQEERF---GLIRPVSEDILIAKLRPGQSIALEAHCRKGVGKDHAKFSPVATASYRLMPKVELMEKVEGVNAKRLVDECRTGVFDIEDIGG 178
BLAST of mRNA_H-elongata_contig100959.87.1 vs. uniprot
Match: H3GV90_PHYRM (DNA-directed RNA polymerases I and III subunit RPAC1 n=20 Tax=Phytophthora TaxID=4783 RepID=H3GV90_PHYRM) HSP 1 Score: 151 bits (382), Expect = 1.230e-41 Identity = 78/143 (54.55%), Postives = 94/143 (65.73%), Query Frame = 0
Query: 2 TEFNTCVFKLEVKNPTRPEDMPDPLPKGTSLAPGPRRTMNVFSGAMEWCPHGNQVERFEQDGGLRPVHDDILIAKLRPGQEIIAELHCRKGIGKDHAKFSPVATASYRLLPVVSLKHEIEDEEAEELVAKCPLNVFDIEDLGG 144
T+ NT VFKL+V PE DP S +V+S +EW P GNQ ERF G +RPVH+DILIAKLRPGQ I E HCRKG+GKDHAKFSPVATASYRL+P V ++E +A+ LV C + +FDIED+GG
Sbjct: 154 TDENTIVFKLDVTCKYDPEHPKDPTKAIHS---------SVYSRDLEWVPQGNQEERF---GSIRPVHEDILIAKLRPGQSIALEAHCRKGLGKDHAKFSPVATASYRLMPKVEFTEKVEGADAKHLVEDCQMGLFDIEDIGG 284
BLAST of mRNA_H-elongata_contig100959.87.1 vs. uniprot
Match: A0A5D6XHD4_9STRA (DNA-directed RNA polymerases I and III subunit RPAC1 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XHD4_9STRA) HSP 1 Score: 150 bits (380), Expect = 1.330e-41 Identity = 81/147 (55.10%), Postives = 96/147 (65.31%), Query Frame = 0
Query: 2 TEFNTCVFKLEVK---NPTRPEDMPDPLPKGTSLAPGPRRTMNVFSGAMEWCPHGNQVERFEQDGGLRPVHDDILIAKLRPGQEIIAELHCRKGIGKDHAKFSPVATASYRLLPVVSLKHEIEDEEAEELVA-KCPLNVFDIEDLGG 144
T+ NT VFKL+V +P P+D L +V+S +EW P GNQ ERF G +RPVH+DILIAKLRPGQ I E HCRKG+GKDHAKFSPVATASYRL+P + L + +A +LVA KC L VFDIEDLGG
Sbjct: 123 TDENTIVFKLDVTCRFDPAHPQDAAKAL------------HTSVYSRDLEWVPQGNQEERF---GAIRPVHEDILIAKLRPGQSIALEAHCRKGVGKDHAKFSPVATASYRLMPHIELAQPVTGADARQLVADKCALGVFDIEDLGG 254
BLAST of mRNA_H-elongata_contig100959.87.1 vs. uniprot
Match: A0A836C8K2_9STRA (DNA-directed RNA polymerases I and III subunit RPAC1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8K2_9STRA) HSP 1 Score: 150 bits (378), Expect = 3.820e-41 Identity = 79/139 (56.83%), Postives = 91/139 (65.47%), Query Frame = 0
Query: 3 EFNTCVFKLEVKNPTRPEDMPDPLPKGTSLAPGPRRTMNVFSGAMEWCPHGNQVERFEQDGGLRPVHDDILIAKLRPGQEIIAELHCRKGIGKDHAKFSPVATASYRLLPVVSLKHEIEDEEAEELVAKCPLNVFDIED 141
E NT VF+L + RP D DP P T V+SG EW P G Q ERF GLRP+HDDIL+AKLR GQEI E+HCRKG+GKDHAK+SPVATASYRL P ++L + A ELVA CP+NVFDIED
Sbjct: 151 ENNTVVFRLH-RRCVRPADA-DPA--------APPYTEGVYSGHFEWIPQGTQAERFPD--GLRPLHDDILLAKLRAGQEIALEMHCRKGVGKDHAKYSPVATASYRLAPRITLAQRVAGAAARELVAACPMNVFDIED 277 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig100959.87.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig100959.87.1 ID=prot_H-elongata_contig100959.87.1|Name=mRNA_H-elongata_contig100959.87.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=155bpback to top |