Homology
BLAST of mRNA_H-elongata_contig100806.73.1 vs. uniprot
Match:
D7G859_ECTSI (Methyltransf_11 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G859_ECTSI)
HSP 1 Score: 265 bits (676), Expect = 2.000e-76
Identity = 166/378 (43.92%), Postives = 206/378 (54.50%), Query Frame = 1
Query: 10 VARLRCRFCDHPFTPAGRGLLVRAMPSGRWDDCIEDMICSDGPSAVSLIARDVNFASEGRCLMGHAEVLVHSRDVLPGAVVVGDGGSQLHNETPRGNKHDRDETRQILECARCELVVGRPSISRGG---LGKGGLDLVLLKHALLADNLSPPDGSVVVLGGGEGVNGDDISKTGIEEIFH-----------------GRQQQCGVVLKGEVSLPRARIFESRTAMKWLMGEMEHSKDADGCSRFVVVARGRPRAVPAGCLKILLVAMHNLVSIDWNRKPHRAHRVAFREESLEEAEKSLEEQRQGGQDSFPEGSGAMSPEV-SIQRAARVPARFIEISFKEYRAVRRRLNDVEWASALTVNATLAKLGRHGYKFSYLF 1080
V+ LRCRFC HP TPAGR L VRAMPSGRWD+CIEDMIC DGP AV ++ARDVNFA GRCLM AEVL+H RDV+ GA+ V D + P + D E R + +CARC+L +GRP+ S G + + L+LLKH LL D+ DG G + G R+FE+RTA+KWL EM H + DGC+RF+V A+GR A P G L +LLV M++LVS+D + KP RAHRVAFREESLEEAE++ E S + AA+VPAR +E+S+ EY VR+RL D WA A KL GY +SYLF
Sbjct: 759 VSCLRCRFCKHPITPAGRVLAVRAMPSGRWDECIEDMICYDGPQAVPMLARDVNFARPGRCLMAQAEVLLHPRDVITGALTVADARGGAVSMMP---EEDDLEWRGV-DCARCDLPLGRPATSPIGHDNSSQESVGLLLLKHCLLGDD----DGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSATEGGLARGPPEATAGSPEKKSPRVFENRTAIKWLQREMAHYNERDGCARFIVSAKGRSPATPGGSLSLLLVKMNSLVSVDGSSKPGRAHRVAFREESLEEAERADEXXXXXXXXXXXXXXXXXXXXXXSDKTAAKVPARLLEVSYGEYATVRQRLLDTAWAGA-----PWRKLDSRGYSYSYLF 1123
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig100806.73.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 1
0 1 Expect = 2.00e-76 / Id = 43.92 Sequence D7G859_ECTSI
Match Name E-value Identity Description
D7G859_ECTSI 2.000e-76 43.92 Methyltransf_11 domain-containing protein n=2 Tax=... [more]
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota Seed ortholog score 266.9 Seed ortholog evalue 1.3e-68 Seed eggNOG ortholog 2880.D7G859 EggNOG free text desc. methyltransferase activity EggNOG OGs KOG2352@1,KOG2352@2759 COG Functional cat. S Best tax level Eukaryota Best eggNOG OG NA|NA|NA Hectar predicted targeting category other localisation Ec32 ortholog description S-adenosyl-L-methionine-dependent methyltransferase Ec32 ortholog Ec-12_001390.1 Exons 1 Model size 1083 Cds size 1083 Stop 1 Start 1
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622929549.2151716-CDS-H-elongata_contig100806:1294..2377 1622929549.2151716-CDS-H-elongata_contig100806:1294..2377 Himanthalia elongata Himel1 dioecious CDS H-elongata_contig100806 1295..2377 - 1691679065.040051-CDS-H-elongata_contig100806:1294..2377 1691679065.040051-CDS-H-elongata_contig100806:1294..2377 Himanthalia elongata Himel1 dioecious CDS H-elongata_contig100806 1295..2377 -
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig100806.73.1
>prot_H-elongata_contig100806.73.1 ID=prot_H-elongata_contig100806.73.1|Name=mRNA_H-elongata_contig100806.73.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=361bp
MSVVARLRCRFCDHPFTPAGRGLLVRAMPSGRWDDCIEDMICSDGPSAVS back to top mRNA from alignment at H-elongata_contig100806:1295..2377-
Legend: CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig100806.73.1 ID=mRNA_H-elongata_contig100806.73.1|Name=mRNA_H-elongata_contig100806.73.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1083bp|location=Sequence derived from alignment at H-elongata_contig100806:1295..2377- (Himanthalia elongata Himel1 dioecious)ATGTCCGTCGTGGCGAGGCTCCGGTGCAGGTTCTGTGACCACCCTTTTAC
GCCCGCCGGGCGCGGCCTGCTGGTTCGAGCAATGCCGTCCGGTCGGTGGG
ACGATTGTATTGAAGATATGATCTGCTCCGACGGTCCTTCGGCCGTGTCC
CTGATCGCGCGGGACGTGAACTTCGCGAGCGAAGGGCGATGCCTGATGGG
GCACGCTGAGGTTCTGGTACACTCACGAGATGTCTTGCCTGGCGCGGTGG
TGGTCGGTGACGGTGGGTCACAACTGCACAACGAGACCCCCCGCGGGAAT
AAGCACGACCGCGACGAGACGCGGCAAATCCTCGAATGCGCGCGCTGCGA
ACTGGTCGTCGGCCGTCCATCCATCTCACGAGGCGGGCTCGGCAAGGGGG
GCCTCGACCTCGTACTGCTAAAGCACGCGTTATTGGCTGATAATCTCTCC
CCACCGGACGGTTCGGTCGTCGTTTTAGGCGGTGGTGAAGGTGTAAACGG
CGATGACATCAGTAAAACCGGTATCGAGGAAATCTTTCATGGAAGACAGC
AGCAGTGTGGAGTTGTATTGAAGGGAGAGGTATCATTACCACGCGCGAGA
ATTTTTGAAAGCCGAACGGCGATGAAGTGGCTCATGGGGGAGATGGAGCA
TTCCAAGGACGCCGACGGCTGCTCCCGCTTCGTTGTGGTGGCGAGGGGCC
GCCCTCGTGCAGTGCCCGCTGGGTGCCTGAAAATCCTCCTGGTTGCTATG
CACAACCTTGTCTCCATCGACTGGAACCGAAAGCCTCACCGGGCACATCG
AGTCGCGTTCCGGGAAGAGTCTCTAGAGGAGGCAGAGAAATCGCTCGAAG
AACAGCGTCAAGGCGGGCAAGATTCATTCCCCGAAGGTAGTGGAGCGATG
TCTCCAGAGGTCTCGATCCAGAGGGCGGCAAGGGTTCCCGCTCGTTTCAT
CGAAATATCATTCAAAGAGTACCGCGCTGTGAGGCGGCGACTGAATGACG
TCGAGTGGGCGTCAGCGTTGACCGTGAACGCTACATTGGCGAAGTTGGGA
CGTCACGGGTATAAGTTCAGTTACCTGTTTTGA back to top Coding sequence (CDS) from alignment at H-elongata_contig100806:1295..2377-
>mRNA_H-elongata_contig100806.73.1 ID=mRNA_H-elongata_contig100806.73.1|Name=mRNA_H-elongata_contig100806.73.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2166bp|location=Sequence derived from alignment at H-elongata_contig100806:1295..2377- (Himanthalia elongata Himel1 dioecious) back to top