mRNA_H-elongata_contig100343.36.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig100343.36.1
Unique NamemRNA_H-elongata_contig100343.36.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig100343.36.1 vs. uniprot
Match: A0A401G4V0_9APHY (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Sparassis crispa TaxID=139825 RepID=A0A401G4V0_9APHY)

HSP 1 Score: 157 bits (398), Expect = 1.140e-40
Identity = 84/208 (40.38%), Postives = 126/208 (60.58%), Query Frame = 1
Query:   10 KILYKRKVGKDGKVEKYKCRLVAQGFWQVGGVHYTEKYSPTPATASTRILLATAVAKNGELRHFDTEQAFLKADIDEELYMKIPEEYQEFSRAVGRLNKAIYGLVQAGRCWNNTFCNDMTAVGFEQEKTDPCVFRKVVDGDAKVMVVVHRDELFTHAKDKATMDRFAVELGQKFEMNDMGDARYYMGCHITRNRKARELKIDQHLYVE 633
            K ++K K G DG++EKYK RLVA+GF QV G+ + E ++P    AS R LLA A   + E+   D + AFL  D+DEE+YMK+P  +   +  V +LNKA+YGL QAGR W      +  A+GF +  +D  VF K  DG   +++ ++ D++   + +   +     +L  +FEM D+G+AR+ +G  ITR+R  R L++ QH YVE
Sbjct:  973 KWVFKIKRGPDGEIEKYKARLVAKGFTQVEGLDFNETFAPVAKFASVRTLLALAAKLDLEIHQMDVKSAFLNGDLDEEIYMKVPPGFHRSNSLVWKLNKALYGLKQAGREWYKKIRAEFEALGFTRCHSDHSVFYKNDDG-ILLIIAIYVDDMLILSDNLTAVTTLKEDLKSRFEMTDLGEARWLLGMEITRDRPRRVLELSQHQYVE 1179          
BLAST of mRNA_H-elongata_contig100343.36.1 vs. uniprot
Match: A0A0C2WN23_AMAMK (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Amanita muscaria (strain Koide BX008) TaxID=946122 RepID=A0A0C2WN23_AMAMK)

HSP 1 Score: 157 bits (397), Expect = 1.540e-40
Identity = 82/222 (36.94%), Postives = 131/222 (59.01%), Query Frame = 1
Query:    1 LAQKILYKRKVGKDGKVEKYKCRLVAQGFWQVGGVHYTEKYSPTPATASTRILLATAVAKNGELRHFDTEQAFLKADIDEELYMKIPEEYQEFSRAVGRLNKAIYGLVQAGRCWNNTFCNDMTAVGFEQEKTDPCVFRKVVDGDAKVMVVVHRDEL-FTHAKDKATMDRFAVELGQKFEMNDMGDARYYMGCHITRNRKARELKIDQHLYVESMVETFNVKE 663
            +  K ++K K G DG+VEKYK RLVAQGF QV G+ Y E ++P   + S R+LLA A   + E+   D + AFL  +++EE+YMK+P  ++  + AV RL KA+YGL QA R W      ++  +GF + + D CVF K +D    ++ V   D +  + + D  T  +   +LG +F+M D+G+  + +   +TRNR+ R +++ Q  Y+E ++E   + E
Sbjct: 1039 IGSKWVFKTKTGPDGQVEKYKARLVAQGFSQVEGIDYNETFAPVTKSNSIRLLLALAARHDWEIHQMDVKSAFLNGELEEEIYMKVPPGHKASADAVWRLKKALYGLKQASREWYKKLSAELKTLGFTRLQADHCVFYKNMDRHPPIIAVYVDDNMVLSDSLDLVTKTK--SDLGSRFDMTDLGEVCWILNMEVTRNRQERTIRLSQSQYIEDILERHGMAE 1258          
BLAST of mRNA_H-elongata_contig100343.36.1 vs. uniprot
Match: A0A6H5JLS1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLS1_9PHAE)

HSP 1 Score: 154 bits (390), Expect = 2.920e-40
Identity = 77/211 (36.49%), Postives = 128/211 (60.66%), Query Frame = 1
Query:   28 KVGKDGKVEKYKCRLVAQGFWQVGGVHYTEKYSPTPATASTRILLATAVAKNGELRHFDTEQAFLKADIDEELYMKIPEEYQEFSRAVGRLNKAIYGLVQAGRCWNNTFCNDMTAVGFEQEKTDPCVFRKVVDGDAKVMVVVHRDELFTHAKDKATMDRFAVELGQKFEMNDMGDARYYMGCHITRNRKARELKIDQHLYVESMVETFNVK 660
            K   +GK+ K+K RLVA+GF ++  V Y    SP P++AS +++LA A  K   L H+D +QA+  A +DEE+++++P    + S  +G+  +AIYGL Q+GR W     + +   GFEQ K DPCVFRK+VD    +++V++ D++     D+   +     L +KF   ++G+  ++  C I R+ +A  LKI Q  Y+++MV+ F+V+
Sbjct:  216 KTNNEGKIHKFKARLVARGFSKIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEIFLRLPAGCGDKSHKIGKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDMLVAESDE-DCEELLASLKKKFPTKNLGECEWFHRCAIERDVEAGTLKISQTTYIDNMVKRFDVQ 425          
BLAST of mRNA_H-elongata_contig100343.36.1 vs. uniprot
Match: A0A401GXA0_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GXA0_9APHY)

HSP 1 Score: 146 bits (368), Expect = 4.170e-40
Identity = 75/211 (35.55%), Postives = 126/211 (59.72%), Query Frame = 1
Query:   10 KILYKRKVGKDGKVEKYKCRLVAQGFWQVGGVHYTEKYSPTPATASTRILLATAVAKNGELRHFDTEQAFLKADIDEELYMKIPEEYQEFSRAVGRLNKAIYGLVQAGRCWNNTFCNDMTAVGFEQEKTDPCVFRKVVDGDAKVMVVVHRDELFTHAKDKATMDRFAVELGQKFEMNDMGDARYYMGCHITRNRKARELKIDQHLYVESMV 642
            K ++++K  K+G+V KYK RLVAQG+ Q+ G+ + E ++P     S R +LA AV  N E+   D + A+L  D+ EE+YM+ PE + + S  V RL+K +YGL Q+G  WN      +T +G++Q + DPCV+ +   G+ ++ + V  D+L         M+    +L   FE+ D+G+ +  +G  I R+R+A +++I Q  Y+ES++
Sbjct:   19 KWVFQKKTNKEGQVVKYKARLVAQGYSQIPGMDFLETFAPVVHLESIRAILALAVVNNWEIGQMDVKGAYLNGDLQEEIYMRQPEGFNDGSGHVCRLHKTLYGLKQSGHKWNRKLHRKLTELGYKQLEADPCVYLQEQKGEVQI-ITVWVDDLLLFTNSPKLMEELKRDLQDLFEVTDLGEPQKIIGFEIERDREAGKIQILQQHYIESIL 228          
BLAST of mRNA_H-elongata_contig100343.36.1 vs. uniprot
Match: A0A401H123_9APHY (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Sparassis crispa TaxID=139825 RepID=A0A401H123_9APHY)

HSP 1 Score: 155 bits (393), Expect = 5.100e-40
Identity = 82/208 (39.42%), Postives = 126/208 (60.58%), Query Frame = 1
Query:   10 KILYKRKVGKDGKVEKYKCRLVAQGFWQVGGVHYTEKYSPTPATASTRILLATAVAKNGELRHFDTEQAFLKADIDEELYMKIPEEYQEFSRAVGRLNKAIYGLVQAGRCWNNTFCNDMTAVGFEQEKTDPCVFRKVVDGDAKVMVVVHRDELFTHAKDKATMDRFAVELGQKFEMNDMGDARYYMGCHITRNRKARELKIDQHLYVE 633
            K ++K K G DG++EKYK RLVA+GF QV G+ + E ++P    AS R LLA A   + E+   D + AFL  D+DEE+YMK+P  ++  +  + +LNKA+YGL QAGR W      +  A+GF +  +D  VF K  DG   +++ ++ D++   + +   +     +L  +FEM D+G+AR+ +G  I R+R  R L++ QH YVE
Sbjct:  650 KWVFKIKRGLDGEIEKYKARLVAKGFTQVEGLDFNETFAPVAKFASVRTLLALAAKLDLEIHQMDVKSAFLNGDLDEEIYMKVPSGFRRSNSLIWKLNKALYGLKQAGREWYKKIRAEFEALGFTRCHSDHSVFYKNDDG-ILLIIAIYVDDMLILSDNLTAVTTLKEDLKSRFEMTDLGEARWLLGMEIARDRPRRVLELSQHQYVE 856          
BLAST of mRNA_H-elongata_contig100343.36.1 vs. uniprot
Match: A0A6H5JQW4_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQW4_9PHAE)

HSP 1 Score: 155 bits (392), Expect = 7.070e-40
Identity = 81/220 (36.82%), Postives = 132/220 (60.00%), Query Frame = 1
Query:    1 LAQKILYKRKVGKDGKVEKYKCRLVAQGFWQVGGVHYTEKYSPTPATASTRILLATAVAKNGELRHFDTEQAFLKADIDEELYMKIPEEYQEFSRAVGRLNKAIYGLVQAGRCWNNTFCNDMTAVGFEQEKTDPCVFRKVVDGDAKVMVVVHRDELFTHAKDKATMDRFAVELGQKFEMNDMGDARYYMGCHITRNRKARELKIDQHLYVESMVETFNVK 660
            ++ K  +  K  K+GK++K+K R+VA+GF Q+  V Y    SP P++AS  ++LA A  K   L H+D +QA   A +DEE++ ++P    + S  + +  +AIYGL Q+GR W     + +   GFEQ K DPCVFRK+VD    +++V++ D++     D+   +     L +KF   ++G+ +++ GC I R+ +A  L+I Q  Y++SMVE F+VK
Sbjct:  891 VSSKWCFSWKTNKEGKIDKFKARVVARGFSQLPNVDYFRSSSPCPSSASIMLMLAVANEKGMNLNHWDVKQASPHATLDEEVFPRLPAGCGDKSHQIVKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVK 1109          
BLAST of mRNA_H-elongata_contig100343.36.1 vs. uniprot
Match: A0A1M2VV58_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2VV58_TRAPU)

HSP 1 Score: 155 bits (391), Expect = 9.850e-40
Identity = 81/212 (38.21%), Postives = 125/212 (58.96%), Query Frame = 1
Query:   10 KILYKRKVGKDGKVEKYKCRLVAQGFWQVGGVHYTEKYSPTPATASTRILLATAVAKNGELRHFDTEQAFLKADIDEELYMKIPEEYQEFSRAVGRLNKAIYGLVQAGRCWNNTFCNDMTAVGFEQEKTDPCVFRKVVDGDAKVMVVVHRDELFTHAKDKATMDRFAVELGQKFEMNDMGDARYYMGCHITRNRKARELKIDQHLYVESMVE 645
            K ++K K G DG +EKYK RLVA+GF QV G+ YT+ ++P    AS R +LA A   + ++   D + AFL  D+DEE+YM  P  +   + +V RL K++YGL QA R W     ++   +GFE+   D  +F KV +G   +++ ++ D++     D+ T+D F   L ++FEM D+G AR+ +G  I R+R    L I Q  Y+E ++E
Sbjct: 1036 KWVFKIKRGPDGSIEKYKARLVAKGFTQVEGIDYTDTFAPVSKFASIRTVLALAAMYDLDVDQMDVKSAFLNGDLDEEIYMTCPPGFDHDAGSVWRLRKSLYGLKQASREWYKKIRSEFEDLGFERSDADHSIFVKVENG-VILIIALYVDDMLIAGNDRTTIDAFKSTLSERFEMTDLGSARWILGMEIERDRARHTLSISQAQYIEKILE 1246          
BLAST of mRNA_H-elongata_contig100343.36.1 vs. uniprot
Match: A0A1M2V3W8_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2V3W8_TRAPU)

HSP 1 Score: 154 bits (388), Expect = 2.190e-39
Identity = 85/215 (39.53%), Postives = 128/215 (59.53%), Query Frame = 1
Query:   16 LYKRKVGKDGKVEKYKCRLVAQGFWQVGGVHYTEKYSPTPATASTRILLATAVAKNGELRHFDTEQAFLKADIDEELYMKIPEEYQEFSRAVGRLNKAIYGLVQAGRCWNNTFCNDMTA-VGFEQEKTDPCVFRKVVDGDAKVMVVVHRDELFTHAKDKATMDRFAVELGQKFEMNDMGDARYYMGCHITRNRKARELKIDQHLYVESMVETFNV 657
            +Y+ K   DG++ +YK RLVAQGF Q  G+ Y E ++P   T S R+LLA A  +N EL  FD   A+L AD+DEE+YM+ P  Y+E S  + RL KA+YGL QAG  WN+     +TA +GF++  +DPCV+ K        +V +H D++   A     MD     L + +++ D+G  R  +G  I+R+RK R L I Q  Y++++++ F +
Sbjct:   64 VYRLKRDSDGRIVRYKARLVAQGFSQAPGLDYFETFAPVIRTDSLRLLLAIAAERNMELAQFDVVGAYLNADLDEEIYMRQPPGYEEGSSPIVRLRKALYGLKQAGXQWNHHINKVLTADLGFQRLNSDPCVYLKK-SPKGLTIVGMHVDDMAALADTPDLMDTLRSGLARHYKITDLGTPRLLLGFEISRDRKKRTLSIKQSQYIQTVLDRFKM 277          
BLAST of mRNA_H-elongata_contig100343.36.1 vs. uniprot
Match: A0A6H5JCG0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCG0_9PHAE)

HSP 1 Score: 149 bits (377), Expect = 1.180e-38
Identity = 80/211 (37.91%), Postives = 122/211 (57.82%), Query Frame = 1
Query:   28 KVGKDGKVEKYKCRLVAQGFWQVGGVHYTEKYSPTPATASTRILLATAVAKNGELRHFDTEQAFLKADIDEELYMKIPEEYQEFSRAVGRLNKAIYGLVQAGRCWNNTFCNDMTAVGFEQEKTDPCVFRKVVDGDAKVMVVVHRDELFTHAKDKATMDRFAVELGQKFEMNDMGDARYYMGCHITRNRKARELKIDQHLYVESMVETFNVK 660
            K  KDGK+EK+K RLVA+GF Q+  V Y    SP P++AS +++LA A  K+ +L H+D +QAF  A +DE++++++P    E S  V +  +AIYGL Q+GR W     + +   GFEQ K DPCVFRK+ D           D +     D    +  A  L + F   D+G+  ++ GC + R+ +A  L+I Q  Y++S+V  F+V+
Sbjct:   54 KTNKDGKIEKFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKSLKLNHWDVKQAFTHAKLDEDVFLRLPAGCGEKSHKVVKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMKDDVVXXXXXXXXDXILVAGSDDDCKELLA-SLNKAFPTKDLGECVWFDGCAVERDLEAGTLRISQTAYIDSIVNRFDVQ 263          
BLAST of mRNA_H-elongata_contig100343.36.1 vs. uniprot
Match: A0A4Y2KUR8_ARAVE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=6 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2KUR8_ARAVE)

HSP 1 Score: 148 bits (373), Expect = 2.630e-38
Identity = 81/217 (37.33%), Postives = 127/217 (58.53%), Query Frame = 1
Query:   19 YKRKVGKDGKVEKYKCRLVAQGFWQVGGVHYTEKYSPTPATASTRILLATAVAKNGELRHFDTEQAFLKADIDEELYMKIPEEYQEFSRA--VGRLNKAIYGLVQAGRCWNNTFCNDMTAVGFEQEKTDPCVFRKVVDGDAKVMVVVHRDELFTHAKDKATMDRFAVELGQKFEMNDMGDARYYMGCHITRNRKARELKIDQHLYVESMVETFNVKE 663
            +K K    G +E+YK RLVAQGF Q  G  Y E ++P     + R  LA A  KN  + H D + AFL  ++++E+YM  PE Y E  +   V +LNKAIYGL QA R W+      +   GFEQ K DPC+F+   +G+  + ++V+ D+L    KD+  + +F  EL +++E+ ++G+  YY+G +I R ++     ++Q   +E ++E FN+KE
Sbjct:   45 FKAKYDSKGNIERYKARLVAQGFSQKFGTDYDETFAPVVTYTTIRTFLAAAAYKNLNVTHVDIKTAFLHGNLEDEVYMSQPEGYIEAGQEQKVCKLNKAIYGLKQAARAWHLKIGESLIKYGFEQSKADPCLFKFANNGNP-MYIIVYVDDLLIAGKDE-DIRKFIKELEEEYELKNLGEVNYYLGINIERTKEGN-FALNQKNKIEEIIEKFNLKE 258          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig100343.36.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A401G4V0_9APHY1.140e-4040.38Retrovirus-related Pol polyprotein from transposon... [more]
A0A0C2WN23_AMAMK1.540e-4036.94Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5JLS1_9PHAE2.920e-4036.49Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A401GXA0_9APHY4.170e-4035.55Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A401H123_9APHY5.100e-4039.42Retrovirus-related Pol polyprotein from transposon... [more]
A0A6H5JQW4_9PHAE7.070e-4036.82Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A1M2VV58_TRAPU9.850e-4038.21Retrovirus-related Pol polyprotein from transposon... [more]
A0A1M2V3W8_TRAPU2.190e-3939.53Retrovirus-related Pol polyprotein from transposon... [more]
A0A6H5JCG0_9PHAE1.180e-3837.91Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A4Y2KUR8_ARAVE2.630e-3837.33Retrovirus-related Pol polyprotein from transposon... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig100343contigH-elongata_contig100343:197..859 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeOpisthokonta
Seed ortholog score147.9
Seed ortholog evalue5.6e-33
Seed eggNOG ortholog946362.XP_004996907.1
EggNOG free text desc.Encoded by
EggNOG OGs38DPC@33154,COG2801@1,KOG0017@2759
COG Functional cat.J
Best tax levelOpisthokonta
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons1
Model size663
Cds size663
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929545.8019614-CDS-H-elongata_contig100343:196..8591622929545.8019614-CDS-H-elongata_contig100343:196..859Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig100343 197..859 +
1691679063.1734152-CDS-H-elongata_contig100343:196..8591691679063.1734152-CDS-H-elongata_contig100343:196..859Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig100343 197..859 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig100343.36.1prot_H-elongata_contig100343.36.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig100343 197..859 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig100343.36.1

>prot_H-elongata_contig100343.36.1 ID=prot_H-elongata_contig100343.36.1|Name=mRNA_H-elongata_contig100343.36.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=221bp
LAQKILYKRKVGKDGKVEKYKCRLVAQGFWQVGGVHYTEKYSPTPATAST
RILLATAVAKNGELRHFDTEQAFLKADIDEELYMKIPEEYQEFSRAVGRL
NKAIYGLVQAGRCWNNTFCNDMTAVGFEQEKTDPCVFRKVVDGDAKVMVV
VHRDELFTHAKDKATMDRFAVELGQKFEMNDMGDARYYMGCHITRNRKAR
ELKIDQHLYVESMVETFNVKE
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mRNA from alignment at H-elongata_contig100343:197..859+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig100343.36.1 ID=mRNA_H-elongata_contig100343.36.1|Name=mRNA_H-elongata_contig100343.36.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=663bp|location=Sequence derived from alignment at H-elongata_contig100343:197..859+ (Himanthalia elongata Himel1 dioecious)
TTGGCACAAAAAATTCTCTACAAGCGAAAAGTCGGAAAGGACGGCAAGGT CGAGAAGTACAAGTGCCGACTTGTCGCCCAAGGATTTTGGCAGGTGGGAG GTGTGCACTACACGGAGAAGTACTCGCCCACGCCAGCGACCGCGTCAACT CGGATCCTTTTGGCAACGGCAGTGGCCAAGAACGGAGAGCTGCGTCATTT CGACACGGAGCAGGCATTCTTAAAAGCGGACATCGATGAGGAATTATACA TGAAGATCCCCGAGGAGTACCAGGAGTTTTCGAGGGCAGTTGGACGGCTG AACAAGGCCATTTACGGACTCGTACAGGCGGGGAGGTGCTGGAACAATAC GTTTTGCAACGACATGACGGCAGTTGGATTCGAGCAGGAAAAGACAGATC CGTGCGTGTTCCGTAAGGTCGTTGACGGTGATGCGAAAGTGATGGTGGTT GTACACCGGGACGAACTTTTTACCCACGCCAAAGACAAGGCGACGATGGA TAGATTCGCGGTTGAGCTTGGACAAAAGTTTGAAATGAATGATATGGGCG ACGCCAGGTACTACATGGGCTGTCACATCACGAGGAACCGCAAGGCGCGC GAGTTGAAGATCGATCAACACTTGTACGTGGAGTCGATGGTGGAAACGTT CAACGTCAAGGAG
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Coding sequence (CDS) from alignment at H-elongata_contig100343:197..859+

>mRNA_H-elongata_contig100343.36.1 ID=mRNA_H-elongata_contig100343.36.1|Name=mRNA_H-elongata_contig100343.36.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1326bp|location=Sequence derived from alignment at H-elongata_contig100343:197..859+ (Himanthalia elongata Himel1 dioecious)
TTGGCACAAAAAATTCTCTACAAGCGAAAAGTCGGAAAGGACGGCAAGGT
CGAGAAGTACAAGTGCCGACTTGTCGCCCAAGGATTTTGGCAGGTGGGAG
GTGTGCACTACACGGAGAAGTACTCGCCCACGCCAGCGACCGCGTCAACT
CGGATCCTTTTGGCAACGGCAGTGGCCAAGAACGGAGAGCTGCGTCATTT
CGACACGGAGCAGGCATTCTTAAAAGCGGACATCGATGAGGAATTATACA
TGAAGATCCCCGAGGAGTACCAGGAGTTTTCGAGGGCAGTTGGACGGCTG
AACAAGGCCATTTACGGACTCGTACAGGCGGGGAGGTGCTGGAACAATAC
GTTTTGCAACGACATGACGGCAGTTGGATTCGAGCAGGAAAAGACAGATC
CGTGCGTGTTCCGTAAGGTCGTTGACGGTGATGCGAAAGTGATGGTGGTT
GTACACCGGGACGAACTTTTTACCCACGCCAAAGACAAGGCGACGATGGA
TAGATTCGCGGTTGAGCTTGGACAAAAGTTTGAAATGAATGATATGGGCG
ACGCCAGGTACTACATGGGCTGTCACATCACGAGGAACCGCAAGGCGCGC
GAGTTGAAGATCGATCAACACTTGTACGTGGAGTCGATGGTGGAAACGTT
CAACGTCAAGGAGTTGGCACAAAAAATTCTCTACAAGCGAAAAGTCGGAA
AGGACGGCAAGGTCGAGAAGTACAAGTGCCGACTTGTCGCCCAAGGATTT
TGGCAGGTGGGAGGTGTGCACTACACGGAGAAGTACTCGCCCACGCCAGC
GACCGCGTCAACTCGGATCCTTTTGGCAACGGCAGTGGCCAAGAACGGAG
AGCTGCGTCATTTCGACACGGAGCAGGCATTCTTAAAAGCGGACATCGAT
GAGGAATTATACATGAAGATCCCCGAGGAGTACCAGGAGTTTTCGAGGGC
AGTTGGACGGCTGAACAAGGCCATTTACGGACTCGTACAGGCGGGGAGGT
GCTGGAACAATACGTTTTGCAACGACATGACGGCAGTTGGATTCGAGCAG
GAAAAGACAGATCCGTGCGTGTTCCGTAAGGTCGTTGACGGTGATGCGAA
AGTGATGGTGGTTGTACACCGGGACGAACTTTTTACCCACGCCAAAGACA
AGGCGACGATGGATAGATTCGCGGTTGAGCTTGGACAAAAGTTTGAAATG
AATGATATGGGCGACGCCAGGTACTACATGGGCTGTCACATCACGAGGAA
CCGCAAGGCGCGCGAGTTGAAGATCGATCAACACTTGTACGTGGAGTCGA
TGGTGGAAACGTTCAACGTCAAGGAG
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