mRNA_H-akashiwo_Contig98.7.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig98.7.1
Unique NamemRNA_H-akashiwo_Contig98.7.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig98.7.1 vs. uniprot
Match: A0A7S3ZAY7_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3ZAY7_9EUKA)

HSP 1 Score: 241 bits (616), Expect = 3.280e-75
Identity = 125/282 (44.33%), Postives = 174/282 (61.70%), Query Frame = 1
Query:    1 PRVQVGDKEG---AKVALDKYGVCIFSKVAEADQLAEAEHLFWSWIEG-LGMGFNRNISESLANLE--QLGYRGTGIISKYGIGQTDFMWYCRTLPKVRGVFETLWGTSDLVTSFDGCAAFRNPWARLESGEGPQTDWVTRSGWYHLDQNFNRNPNLECYQGLLNFFPAEAATGATVVVPKSHRRFQEVFQNRG------AGGSDFVNLSSDADFGSFCTAAVQAALGPGDFLAWDSRVIHCSQGVDLARGEAAALPGREGAPLARLAA-FVCMVPAETLGA 807
            PRV   D +    AK AL+++G  IF   A  D+L   E LFW W++       +++  ES  + +  QL +   G+ SK+GIGQ++FMW+CR LP VRG FE++WGT DL+TSFDG  A+RNPW      +G    W+T  GW+H+DQ+F+ +P L  YQ +LNF+PA A+TG+TV+V  SH+ F+ VF+             D+V ++   D+G + T A QA L PGD L WDSRVIHC+QG+D   G +A +PGRE  PLARL + F+  +  E L A
Sbjct:   24 PRVARNDAKASQKAKAALEEHGAVIFEDAATVDELKSGEALFWEWLQNNTPAKIDKDKPESFQDHKWNQLCFPKNGVCSKFGIGQSEFMWHCRLLPGVRGAFESVWGTKDLITSFDGWGAYRNPWY-----QGGNKSWITSGGWFHIDQSFHNDPGLTSYQAILNFYPATASTGSTVLVLGSHKEFKGVFKGERYIKRVRQNTVDYVKVTRPEDYGKYLTRARQAVLKPGDLLMWDSRVIHCAQGIDYNAGVSAVMPGRESEPLARLVSHFLFPMAIEVLAA 300          
BLAST of mRNA_H-akashiwo_Contig98.7.1 vs. uniprot
Match: A0A7S3Z8B3_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3Z8B3_9EUKA)

HSP 1 Score: 223 bits (568), Expect = 3.970e-67
Identity = 120/303 (39.60%), Postives = 173/303 (57.10%), Query Frame = 1
Query:   19 DKEGAKVALDKYGVCIFSKVAEADQLAEAEHLFWSWIEGLGMGFNRNISESL--ANLEQLGYRGTGIISKYGIGQTDFMWYCRTLPKVRGVFETLWGTSDLVTSFDGCAAFRNPWARLESGEGPQTDWVTRSGWYHLDQNFNRNPNLECYQGLLNFFPAEAATGATVVVPKSH-RRFQEVFQNRGAGG----SDFVNLSSDADFGSFCTAAVQAALGPGDFLAWDSRVIHCSQGVDLARGEAAALPGREGA---------PLARLAAFVCMVPAETLGAEARRGSRGARREFFQLGLTSGHNP 879
            D + A+  L ++G CI   VA+  ++ +A+  F SWI   G+       +S+  A  E LG+  TG++++Y IGQ+D +W+CRTL  V+ VF+ +WGT DLVTSFDG  A RNP+   E+G   + +W T+ GW+HLDQN    P  + +QGLLN FPA A +G+T+VVPKSH  +F ++FQ+         + FV L    DF  +C  AVQ  LG GD   WDSR IHCSQGV+    + + L               P  RL  ++CMVP + +  E+++    AR +   +G T  H+P
Sbjct:   56 DSKRARDILSEWGFCIVKGVAKPSEVEKAKEHFMSWIRKAGINCKSGDWKSIDGAKWESLGFPRTGVLTRYSIGQSDLLWHCRTLEGVQQVFQNIWGTEDLVTSFDGAGAARNPFFASEAG---RREWCTQGGWFHLDQNAKLMPGFDLWQGLLNLFPASANSGSTIVVPKSHIEKFPKIFQDSHRRDWKRRTHFVQLDKSGDFERYCKDAVQVVLGAGDMFLWDSRTIHCSQGVNTLLCDQSELAKASEIDRKLFHPDNPFVRLVTYICMVPRKRINEESKK----ARTKAVLMGTTYPHHP 351          
BLAST of mRNA_H-akashiwo_Contig98.7.1 vs. uniprot
Match: A0A7S3Z9X9_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3Z9X9_9EUKA)

HSP 1 Score: 216 bits (551), Expect = 2.620e-64
Identity = 122/305 (40.00%), Postives = 172/305 (56.39%), Query Frame = 1
Query:   13 VGDKEGAKVALDKYGVCIFSKVAEADQLAEAEHLFWSWIEGLGMGFNRNISESL--ANLEQLGYRGTGIISKYGIGQTDFMWYCRTLPKVRGVFETLWGTSDLVTSFDGCAAFRNPWARLESGEGPQTDWVTRSGWYHLDQNFNRNPNLECYQGLLNFFPAEAATGATVVVPKSHR-RFQEVFQNRGAGG----SDFVNLSSDADFGSFCTAAVQAALGPGDFLAWDSRVIHCSQGVD---LARGEAAALPGRE------GAPLARLAAFVCMVPAETLGAEARRGSRGARREFFQLGLTSGHNP 879
            V + + A+  L ++G CI    A+  ++ +A+ LF SW+   G+       +S+  +  + LG+  TG++++YGIGQ+D +WYCRTL  VR  F+ +W T DL+TSFDG    RNP+   E G+  Q +W T+ GW+HLDQN    P  + +QGLLN FP+ A TG+TVVVPKSH  +F ++F +R        S FV L+   DF  +C  AVQ  L  GD   WDSR IHCSQG++       E    P  +        P ARL  ++CMVP E L  E+++    A RE    G+T  H P
Sbjct:   77 VSESKRARDILAEWGFCIIKGAAKPSEIEKAKELFVSWLRKAGITCKSGDWKSIDGSKWKSLGFPKTGVLTQYGIGQSDLLWYCRTLEGVRKAFQDVWETDDLITSFDGAGVARNPFYASE-GQARQ-EWCTQGGWFHLDQNAKLTPGFDLWQGLLNLFPSSANTGSTVVVPKSHTDKFSKIFTDRHRINWRKKSHFVMLNRSGDFERYCKDAVQVVLDAGDLFLWDSRTIHCSQGINPLLCDPSEMTKAPEIDRKLLDPSNPFARLVTYICMVPRERLSEESKKARMRAVRE----GITGPHQP 375          
BLAST of mRNA_H-akashiwo_Contig98.7.1 vs. uniprot
Match: A0A7S2HB61_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HB61_9STRA)

HSP 1 Score: 189 bits (480), Expect = 9.130e-56
Identity = 104/219 (47.49%), Postives = 135/219 (61.64%), Query Frame = 1
Query:  238 TDFMWYCRTLPKVRGVFETLWGT--SDLVTSFDGCAAFRNPWARLESGEGPQTDWVTRSGWYHLDQNFNRNPNLECYQGLLNFFPAEAATGATVVVPKSHRRFQEVFQNRGAGGSDFVNLSSDADFGSFCTAAVQAALGPGDFLAWDSRVIHCSQGVDLARGEAAALPG-REGAPLARLAAFVCMVPAETLGAE--ARRGSRGARREFFQLGLTSGHNP 879
            + FM +CR L  V GVF TLWGT  SDLVTSFDGC  +RNPWA   +   P+  + T+ GW+HLDQN++ +P LE +QGLLNFFP   ++G+TVV+P SH+ FQE  +    GGS FV ++           A  A L PGDF+AWDSRV+HCS G+D        +PG R  +PL RL A++ M+P   LGA+   R  +  ARR     G  SGH+P
Sbjct:    1 SKFMSHCRQLSGVTGVFATLWGTTASDLVTSFDGCGTWRNPWACSST---PRKGYYTQGGWFHLDQNWHNSPGLETFQGLLNFFPTTESSGSTVVLPGSHKDFQENCRFAPGGGS-FVRMTYPGQKEYCEERASMALLEPGDFIAWDSRVVHCSSGIDPHASMDEVMPGERRHSPLTRLVAYISMLPRSRLGADQSTRERATAARRRAVVRGTGSGHDP 215          
BLAST of mRNA_H-akashiwo_Contig98.7.1 vs. uniprot
Match: F0XZ61_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZ61_AURAN)

HSP 1 Score: 186 bits (472), Expect = 3.210e-53
Identity = 119/310 (38.39%), Postives = 158/310 (50.97%), Query Frame = 1
Query:    1 PRVQVGDKEGAKVALDKYGVCIFSKVAEADQLAEAEHLFWSWIEGLGMGFNRNISESLAN--LEQLGYRGTGIISKYGIGQTDFMWYCRTLPKVRGVFETLWG---------TSDLVTSFDGCAAFRNPWARLESGEGPQTDWVTRSGWYHLDQNFNRNPNLECYQGLLNFFPAEAATGATVVVPKSHRRFQEVFQNRG-AGGSDFVNLSSDADFGSFC--TAAVQAALGPGDFLAWDSRVIHCSQGV--DLARGEAAALPGREGAP-LARLAAFVCMVPAETLGAEARRGSRGARREFFQLGLTSGHNP 879
            P   +GD       L ++GV +F  V  AD  +  E LFW W+E    G +R    + A    + LG+R +G+++   IGQ+D +W  R    V   + T+WG         T  LVTSFDGC  +RNP     +G+    +  T   WYHLDQNF  +P    YQG L  + A+  TG+TVV P SH++F E     G AG   FV ++   D   +C  TA   A LGPGD++ WDSRV+HCS G   +LA     A  G    P L RLA +V M+P E  GA        ARR   + G TSGH+P
Sbjct:   25 PVCAIGDASRCAALLKRFGVVVFRGVVPADDRSRLESLFWDWLEREHEGVDRARPATHAPRVFDSLGHRNSGVVNTGSIGQSDLLWAARQHAGVVDAWRTVWGLDMTEPAATTRQLVTSFDGCGVWRNPCHPAHAGKA---NVRTAQSWYHLDQNFATHPGFVGYQGALTVWGADGHTGSTVVCPGSHKQFAENCARGGKAGRGSFVRMAGRGD-AEYCARTARQVAPLGPGDYVIWDSRVVHCSNGASRNLAPHHVLAARGVSEQPSLLRLALYVAMMPRERAGAHVVE----ARRRAVRRGATSGHDP 326          
BLAST of mRNA_H-akashiwo_Contig98.7.1 vs. uniprot
Match: A0A7S2TW86_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TW86_9EUKA)

HSP 1 Score: 160 bits (404), Expect = 2.430e-44
Identity = 79/206 (38.35%), Postives = 123/206 (59.71%), Query Frame = 1
Query:   13 VGDKEGAKVALDKYGVCIFSKVAEADQLAEAEHLFWSWIEGLGMGFNRNISESLAN--LEQLGYRGTGIISKYGIGQTDFMWYCRTLPKVRGVFETLWGTSDLVTSFDGCAAFRNPWARLESGEGPQTDWVTRSGWYHLDQNFNRNPNLECYQGLLNFFPAEAATGATVVVPKSH-RRFQEVFQNRGAGG----SDFVNLSSDADF 609
            V + + A+  L ++G CI    A+  ++ +A+  F SW+   G+       +S+     + LG+  TG+++++ IG +D +WYCRTL  V+ VF+ LWGT DL+TSFDG  A RNP+     G+  +++W T+ GW+HLDQN    P  + +QGLLN FPA A TG+TVVVP+SH  +F ++F++           F+ L+   DF
Sbjct:   39 VSESKRARDILAEWGFCIVKGAAKPLEVEKAKEHFMSWLRKAGINCKAGDWKSIDGDKWKSLGFPKTGVMTQFAIGHSDLLWYCRTLEGVQKVFQDLWGTEDLITSFDGAGAARNPFYAAGGGQQGRSEWCTQGGWFHLDQNAKVTPGFDLWQGLLNLFPASANTGSTVVVPRSHIEKFPKIFKDSHRRNMKKRGHFIMLNKGGDF 244          
BLAST of mRNA_H-akashiwo_Contig98.7.1 vs. uniprot
Match: A0A7S3NKM9_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NKM9_9STRA)

HSP 1 Score: 158 bits (399), Expect = 1.240e-41
Identity = 109/307 (35.50%), Postives = 148/307 (48.21%), Query Frame = 1
Query:    1 PRVQVGDKEGAKVALDKYGVCIFSKVAEADQLAEAEHLFWSWIEGLGMGFNRNISESLANLEQ-LGYRGTGIISKYGIGQTDFMWYCRTLPKVRGVFETLWGTSDLVTSFDGCAAFRNPWARLESGEGPQTDWVTRSGWYHLDQNFNRNPNLECYQGLLNFFP-AEAATGATVVVPKSHRRFQEVFQ--NRGAGGSDFVNLSSDADFGSFCTAAVQAA-LGPGDFLAWDSRVIHCSQGVDLARGEAAALPG-----------REGAP--LARLAAFVCMVPAETLGAEARRGSRGARREFFQLGLTS 867
            P  Q+GD    K  L ++GV IF  V  AD++  A  LFW W E          S   + + Q  G+  TG+ + + IGQ++F+WYCR   K    + T+W   DLV+SFDGC  +RNP+          +D  T   WYHLDQN   N +   YQGL+     A   TG+ VV+P SH+ F+   +  N+      FV LS+ AD       AVQ A L PGD + WDSRV+HCS  V        +L G            E +P  LARL A+V M+P   + +      R A  + +  G  S
Sbjct:  113 PICQIGDVHTCKQLLAEHGVVIFRNVLNADEIQVARDLFWQWFETHTPARRTKPSTLTSAVAQSCGHANTGVTTNFCIGQSEFLWYCRL--KAVPAWRTVWDCEDLVSSFDGCGLWRNPYLF--------SDAFTHGRWYHLDQNVRENAHFLGYQGLVQISDTATDETGSLVVIPGSHKDFRANCERGNKLLNRGSFVRLSTPADLAYCDQHAVQCAPLYPGDIVVWDSRVVHCSASVCRNLPSTHSLRGGRTFFSSKFSDNEISPPMLARLVAYVAMMPRSHVSSRVATNRRNAVLQGYGSGWNS 409          
BLAST of mRNA_H-akashiwo_Contig98.7.1 vs. uniprot
Match: A0A6B2LB10_9EUKA (Uncharacterized protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LB10_9EUKA)

HSP 1 Score: 152 bits (384), Expect = 6.130e-41
Identity = 98/265 (36.98%), Postives = 133/265 (50.19%), Query Frame = 1
Query:  112 LFWSWIEGLGMGFNRNISESLANLEQLGYRGTGIISKYGIGQTDFMWYCRTLPKVRGVFETLWGTSDLVTSFDGCAAFRNPWARLESGEGPQTDWVTRSGW-YHLDQNFNRNPNLECYQGLLNFFPAEAATGATVVVPKSHRR-FQEVFQNRGAGGSDFVNLSSDADFGSFCTAAVQAALGP-------GDFLAWDSRVIHCSQGVDLARGEAAALPGREGAPLARLAAFVCMVPAETLGAEARRGSRGARREFFQLGLTSGHNP 879
            L W ++EGLG+G +RN   S +  +     G GI+   G+GQ++ MWY R+LP +R +F  +WGTS+L TSFDGC      W   E     Q+ W T S   YHLDQN    P+  C QG LN  PA    G  V+VP+SH   + ++F+N   G SD++ L +            QA L P       GDF+ WDSR+IHC+    + R     +P  +  P  RL  +VCM P   L  E        RR  +  G T+ H P
Sbjct:    4 LAWDFLEGLGLGIHRNDISSWSTPKWPDPFGNGILCGDGVGQSELMWYARSLPPIRTIFSKIWGTSELATSFDGCCF----WRAFEY----QSAWKTHSARAYHLDQNGVTKPSKCCVQGFLNVLPAGPGDGGLVIVPRSHTTVYPQIFKNF-KGRSDWIPLHNHRPLWE--EMIPQAGLAPIKVCAEAGDFVVWDSRIIHCNGAGHVPRE----VPADQVLPPRRLVTYVCMTPKSRLRGEVVE----ERRRCYLNGDTTNHWP 249          
BLAST of mRNA_H-akashiwo_Contig98.7.1 vs. uniprot
Match: A0A817SS97_9BILA (Hypothetical protein n=2 Tax=Rotaria sp. Silwood2 TaxID=2762512 RepID=A0A817SS97_9BILA)

HSP 1 Score: 145 bits (367), Expect = 1.000e-38
Identity = 81/219 (36.99%), Postives = 121/219 (55.25%), Query Frame = 1
Query:   43 LDKYGVCIFSKVAEADQLAEAEHLFWSWIEGLGMGFNRNISESLANLEQL-GYRGTGIISKYGIGQTDFMWYCRTLPKVRGVFETLWGTSDLVTSFDGCAAFRNPWARLESGEGPQTDWVTRSGWYHLDQNFNRNPNLECYQGLLNFFPAEAATGATVVVPKSHRRFQEVFQNRGAGGSDFVNL-SSDADFGSFCTAAVQAALGPGDFLAWDSRVIHCS 693
            L++YG  +FS V E D++ E ++L W ++E L   FNR   +  +      G R  G+ + YG+GQ+ FMW  R+  +V+ V+E LW  SDL+ SF+GC  FR+ W+  ++       W T SGW H+DQN +  PN  C QG ++      +TG  +V P+SH RF E+ +  G+   DFV + S+   F              GDF+ WDSR+IHC+
Sbjct:   34 LNQYGYAVFSDVMELDKVEENKNLLWQFLETLPPPFNRIRRDRPSTWNHWPGIRSHGVTNTYGLGQSAFMWNIRSNREVKRVYERLWNRSDLLVSFEGCGIFRD-WSYNQT-------WKTESGWNHIDQNPDSKPNRCCVQGFVSLTDQSESTGGLIVFPRSHLRFSEL-RGLGSKARDFVIVPSTHPIFDEGRAIGKLVHCHAGDFVLWDSRLIHCN 243          
BLAST of mRNA_H-akashiwo_Contig98.7.1 vs. uniprot
Match: A0A7R9UVF0_DIALT (Hypothetical protein (Fragment) n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9UVF0_DIALT)

HSP 1 Score: 147 bits (371), Expect = 1.860e-38
Identity = 106/300 (35.33%), Postives = 147/300 (49.00%), Query Frame = 1
Query:    4 RVQVGDKEGAKVALDKYGVCIFSKVAEADQLAEAEHLFWSWIEGLGMGFNRNISESLANLEQLGYRGTGIISKYGIGQTDFMWYCRTLPKVRGVFETLWGTSD--LVTSFDGCAAFRNPWARLESGEGPQTDWVTRSGWYHLDQNFNRNPNLECYQGLLNFFPAEAATGATVVVPKSHRRFQEVFQNRGAGGSDFVNLSSDADF-----GSFCTAAVQAALGPGDFLAWDSRVIHCSQGVDLARGEAAALPGREGAP-LARLAAFVCMVPAETLGAEARRGSRGARREFFQLGLTSGHNP 879
            R  + + +G K  L + G C+ + VA AD+ A AE LFW+W+E +    N   + +  ++     R TGI+S  GIGQ++F W  R+LP V   F  +WG  D  L++SFDG   FR P+ R  +G     D  T  GW+H+DQ+  +   L   QGL++   + AATG   V+P +HR   EV         D+V+L+ D              A+    G GD L WDSRV+HC+        E       +G P L RLAA+VCM       A   R  R   R   +LG TS H P
Sbjct:   25 RFSIANADGWKRHLSEEGYCVIASVANADECANAERLFWAWVEAVEPRVNPEDAATWRHIPCS--RFTGIVSSGGIGQSEFAWRLRSLPAVVRAFAQIWGCDDRSLISSFDGANCFR-PF-RAPAGAA---DLATSGGWWHIDQSAAKQ-GLHAVQGLVSVTASTAATGGLCVLPGTHREHAEVSGRYAHVKQDYVHLARDDPLLARVRDGHGPGALLVTCGAGDLLLWDSRVVHCNTPALRQAPE-------QGTPRLLRLAAYVCMTERSRADAVTLRARR---RAVDELG-TSTHWP 305          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig98.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3ZAY7_9EUKA3.280e-7544.33Hypothetical protein (Fragment) n=1 Tax=Lotharella... [more]
A0A7S3Z8B3_9EUKA3.970e-6739.60Hypothetical protein n=1 Tax=Lotharella globosa Ta... [more]
A0A7S3Z9X9_9EUKA2.620e-6440.00Hypothetical protein n=1 Tax=Lotharella globosa Ta... [more]
A0A7S2HB61_9STRA9.130e-5647.49Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
F0XZ61_AURAN3.210e-5338.39Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S2TW86_9EUKA2.430e-4438.35Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
A0A7S3NKM9_9STRA1.240e-4135.50Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A6B2LB10_9EUKA6.130e-4136.98Uncharacterized protein n=1 Tax=Arcella intermedia... [more]
A0A817SS97_9BILA1.000e-3836.99Hypothetical protein n=2 Tax=Rotaria sp. Silwood2 ... [more]
A0A7R9UVF0_DIALT1.860e-3835.33Hypothetical protein (Fragment) n=2 Tax=Diacronema... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig98contigH-akashiwo_Contig98:573760..574638 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog227086.JGI_V11_85457
PFAMsPhyH
Model size879
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons1
Evalue8.36e-81
EggNOG OGs2E1NR@1|root,2S8YZ@2759|Eukaryota
Cds size879
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681388065.787971-CDS-H-akashiwo_Contig98:573759..5746381681388065.787971-CDS-H-akashiwo_Contig98:573759..574638Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig98 573760..574638 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig98.7.1prot_H-akashiwo_Contig98.7.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig98 573760..574638 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig98.7.1

>prot_H-akashiwo_Contig98.7.1 ID=prot_H-akashiwo_Contig98.7.1|Name=mRNA_H-akashiwo_Contig98.7.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=293bp
PRVQVGDKEGAKVALDKYGVCIFSKVAEADQLAEAEHLFWSWIEGLGMGF
NRNISESLANLEQLGYRGTGIISKYGIGQTDFMWYCRTLPKVRGVFETLW
GTSDLVTSFDGCAAFRNPWARLESGEGPQTDWVTRSGWYHLDQNFNRNPN
LECYQGLLNFFPAEAATGATVVVPKSHRRFQEVFQNRGAGGSDFVNLSSD
ADFGSFCTAAVQAALGPGDFLAWDSRVIHCSQGVDLARGEAAALPGREGA
PLARLAAFVCMVPAETLGAEARRGSRGARREFFQLGLTSGHNP
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mRNA from alignment at H-akashiwo_Contig98:573760..574638-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig98.7.1 ID=mRNA_H-akashiwo_Contig98.7.1|Name=mRNA_H-akashiwo_Contig98.7.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=879bp|location=Sequence derived from alignment at H-akashiwo_Contig98:573760..574638- (Heterosigma akashiwo CCMP452)
CCTCGTGTGCAAGTTGGAGATAAGGAAGGGGCCAAGGTCGCTCTGGACAA GTATGGAGTTTGCATCTTCTCCAAAGTAGCAGAAGCAGACCAGCTAGCAG AAGCAGAGCACCTTTTCTGGTCTTGGATTGAGGGTTTGGGAATGGGCTTT AATCGAAATATATCCGAGAGCCTAGCCAATCTTGAGCAACTTGGATATAG AGGTACTGGAATAATTAGCAAATATGGAATCGGGCAAACAGATTTCATGT GGTACTGCCGGACACTCCCTAAAGTACGGGGTGTGTTTGAGACATTGTGG GGAACATCAGACCTTGTCACATCCTTTGATGGTTGTGCTGCTTTTCGGAA CCCATGGGCAAGGCTTGAGTCTGGTGAAGGCCCACAAACTGACTGGGTGA CGAGGTCTGGCTGGTATCACCTGGACCAGAACTTCAACCGCAACCCGAAT CTGGAGTGCTACCAGGGACTTCTGAACTTCTTCCCTGCAGAGGCTGCTAC TGGAGCAACCGTGGTGGTCCCGAAATCCCACCGCCGTTTTCAGGAGGTGT TCCAGAACCGTGGCGCTGGAGGCTCCGACTTTGTGAACCTGTCGAGCGAC GCCGACTTCGGCAGCTTCTGCACGGCCGCGGTGCAGGCGGCGCTCGGGCC CGGGGACTTCCTGGCCTGGGACTCGCGGGTCATCCACTGCAGCCAGGGCG TGGACCTCGCCCGGGGGGAGGCGGCCGCGCTGCCCGGGCGCGAGGGGGCG CCGCTGGCCCGGCTGGCCGCCTTTGTCTGCATGGTGCCGGCCGAGACGCT GGGCGCCGAGGCCCGCCGGGGGAGCCGCGGGGCGCGGCGGGAGTTTTTCC AGCTGGGCCTCACCTCGGGCCACAACCCT
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Coding sequence (CDS) from alignment at H-akashiwo_Contig98:573760..574638-

>mRNA_H-akashiwo_Contig98.7.1 ID=mRNA_H-akashiwo_Contig98.7.1|Name=mRNA_H-akashiwo_Contig98.7.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=879bp|location=Sequence derived from alignment at H-akashiwo_Contig98:573760..574638- (Heterosigma akashiwo CCMP452)
CCTCGTGTGCAAGTTGGAGATAAGGAAGGGGCCAAGGTCGCTCTGGACAA
GTATGGAGTTTGCATCTTCTCCAAAGTAGCAGAAGCAGACCAGCTAGCAG
AAGCAGAGCACCTTTTCTGGTCTTGGATTGAGGGTTTGGGAATGGGCTTT
AATCGAAATATATCCGAGAGCCTAGCCAATCTTGAGCAACTTGGATATAG
AGGTACTGGAATAATTAGCAAATATGGAATCGGGCAAACAGATTTCATGT
GGTACTGCCGGACACTCCCTAAAGTACGGGGTGTGTTTGAGACATTGTGG
GGAACATCAGACCTTGTCACATCCTTTGATGGTTGTGCTGCTTTTCGGAA
CCCATGGGCAAGGCTTGAGTCTGGTGAAGGCCCACAAACTGACTGGGTGA
CGAGGTCTGGCTGGTATCACCTGGACCAGAACTTCAACCGCAACCCGAAT
CTGGAGTGCTACCAGGGACTTCTGAACTTCTTCCCTGCAGAGGCTGCTAC
TGGAGCAACCGTGGTGGTCCCGAAATCCCACCGCCGTTTTCAGGAGGTGT
TCCAGAACCGTGGCGCTGGAGGCTCCGACTTTGTGAACCTGTCGAGCGAC
GCCGACTTCGGCAGCTTCTGCACGGCCGCGGTGCAGGCGGCGCTCGGGCC
CGGGGACTTCCTGGCCTGGGACTCGCGGGTCATCCACTGCAGCCAGGGCG
TGGACCTCGCCCGGGGGGAGGCGGCCGCGCTGCCCGGGCGCGAGGGGGCG
CCGCTGGCCCGGCTGGCCGCCTTTGTCTGCATGGTGCCGGCCGAGACGCT
GGGCGCCGAGGCCCGCCGGGGGAGCCGCGGGGCGCGGCGGGAGTTTTTCC
AGCTGGGCCTCACCTCGGGCCACAACCCT
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