mRNA_H-akashiwo_Contig98.7.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig98.7.1 vs. uniprot
Match: A0A7S3ZAY7_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3ZAY7_9EUKA) HSP 1 Score: 241 bits (616), Expect = 3.280e-75 Identity = 125/282 (44.33%), Postives = 174/282 (61.70%), Query Frame = 1 Query: 1 PRVQVGDKEG---AKVALDKYGVCIFSKVAEADQLAEAEHLFWSWIEG-LGMGFNRNISESLANLE--QLGYRGTGIISKYGIGQTDFMWYCRTLPKVRGVFETLWGTSDLVTSFDGCAAFRNPWARLESGEGPQTDWVTRSGWYHLDQNFNRNPNLECYQGLLNFFPAEAATGATVVVPKSHRRFQEVFQNRG------AGGSDFVNLSSDADFGSFCTAAVQAALGPGDFLAWDSRVIHCSQGVDLARGEAAALPGREGAPLARLAA-FVCMVPAETLGA 807 PRV D + AK AL+++G IF A D+L E LFW W++ +++ ES + + QL + G+ SK+GIGQ++FMW+CR LP VRG FE++WGT DL+TSFDG A+RNPW +G W+T GW+H+DQ+F+ +P L YQ +LNF+PA A+TG+TV+V SH+ F+ VF+ D+V ++ D+G + T A QA L PGD L WDSRVIHC+QG+D G +A +PGRE PLARL + F+ + E L A Sbjct: 24 PRVARNDAKASQKAKAALEEHGAVIFEDAATVDELKSGEALFWEWLQNNTPAKIDKDKPESFQDHKWNQLCFPKNGVCSKFGIGQSEFMWHCRLLPGVRGAFESVWGTKDLITSFDGWGAYRNPWY-----QGGNKSWITSGGWFHIDQSFHNDPGLTSYQAILNFYPATASTGSTVLVLGSHKEFKGVFKGERYIKRVRQNTVDYVKVTRPEDYGKYLTRARQAVLKPGDLLMWDSRVIHCAQGIDYNAGVSAVMPGRESEPLARLVSHFLFPMAIEVLAA 300
BLAST of mRNA_H-akashiwo_Contig98.7.1 vs. uniprot
Match: A0A7S3Z8B3_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3Z8B3_9EUKA) HSP 1 Score: 223 bits (568), Expect = 3.970e-67 Identity = 120/303 (39.60%), Postives = 173/303 (57.10%), Query Frame = 1 Query: 19 DKEGAKVALDKYGVCIFSKVAEADQLAEAEHLFWSWIEGLGMGFNRNISESL--ANLEQLGYRGTGIISKYGIGQTDFMWYCRTLPKVRGVFETLWGTSDLVTSFDGCAAFRNPWARLESGEGPQTDWVTRSGWYHLDQNFNRNPNLECYQGLLNFFPAEAATGATVVVPKSH-RRFQEVFQNRGAGG----SDFVNLSSDADFGSFCTAAVQAALGPGDFLAWDSRVIHCSQGVDLARGEAAALPGREGA---------PLARLAAFVCMVPAETLGAEARRGSRGARREFFQLGLTSGHNP 879 D + A+ L ++G CI VA+ ++ +A+ F SWI G+ +S+ A E LG+ TG++++Y IGQ+D +W+CRTL V+ VF+ +WGT DLVTSFDG A RNP+ E+G + +W T+ GW+HLDQN P + +QGLLN FPA A +G+T+VVPKSH +F ++FQ+ + FV L DF +C AVQ LG GD WDSR IHCSQGV+ + + L P RL ++CMVP + + E+++ AR + +G T H+P Sbjct: 56 DSKRARDILSEWGFCIVKGVAKPSEVEKAKEHFMSWIRKAGINCKSGDWKSIDGAKWESLGFPRTGVLTRYSIGQSDLLWHCRTLEGVQQVFQNIWGTEDLVTSFDGAGAARNPFFASEAG---RREWCTQGGWFHLDQNAKLMPGFDLWQGLLNLFPASANSGSTIVVPKSHIEKFPKIFQDSHRRDWKRRTHFVQLDKSGDFERYCKDAVQVVLGAGDMFLWDSRTIHCSQGVNTLLCDQSELAKASEIDRKLFHPDNPFVRLVTYICMVPRKRINEESKK----ARTKAVLMGTTYPHHP 351
BLAST of mRNA_H-akashiwo_Contig98.7.1 vs. uniprot
Match: A0A7S3Z9X9_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3Z9X9_9EUKA) HSP 1 Score: 216 bits (551), Expect = 2.620e-64 Identity = 122/305 (40.00%), Postives = 172/305 (56.39%), Query Frame = 1 Query: 13 VGDKEGAKVALDKYGVCIFSKVAEADQLAEAEHLFWSWIEGLGMGFNRNISESL--ANLEQLGYRGTGIISKYGIGQTDFMWYCRTLPKVRGVFETLWGTSDLVTSFDGCAAFRNPWARLESGEGPQTDWVTRSGWYHLDQNFNRNPNLECYQGLLNFFPAEAATGATVVVPKSHR-RFQEVFQNRGAGG----SDFVNLSSDADFGSFCTAAVQAALGPGDFLAWDSRVIHCSQGVD---LARGEAAALPGRE------GAPLARLAAFVCMVPAETLGAEARRGSRGARREFFQLGLTSGHNP 879 V + + A+ L ++G CI A+ ++ +A+ LF SW+ G+ +S+ + + LG+ TG++++YGIGQ+D +WYCRTL VR F+ +W T DL+TSFDG RNP+ E G+ Q +W T+ GW+HLDQN P + +QGLLN FP+ A TG+TVVVPKSH +F ++F +R S FV L+ DF +C AVQ L GD WDSR IHCSQG++ E P + P ARL ++CMVP E L E+++ A RE G+T H P Sbjct: 77 VSESKRARDILAEWGFCIIKGAAKPSEIEKAKELFVSWLRKAGITCKSGDWKSIDGSKWKSLGFPKTGVLTQYGIGQSDLLWYCRTLEGVRKAFQDVWETDDLITSFDGAGVARNPFYASE-GQARQ-EWCTQGGWFHLDQNAKLTPGFDLWQGLLNLFPSSANTGSTVVVPKSHTDKFSKIFTDRHRINWRKKSHFVMLNRSGDFERYCKDAVQVVLDAGDLFLWDSRTIHCSQGINPLLCDPSEMTKAPEIDRKLLDPSNPFARLVTYICMVPRERLSEESKKARMRAVRE----GITGPHQP 375
BLAST of mRNA_H-akashiwo_Contig98.7.1 vs. uniprot
Match: A0A7S2HB61_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HB61_9STRA) HSP 1 Score: 189 bits (480), Expect = 9.130e-56 Identity = 104/219 (47.49%), Postives = 135/219 (61.64%), Query Frame = 1 Query: 238 TDFMWYCRTLPKVRGVFETLWGT--SDLVTSFDGCAAFRNPWARLESGEGPQTDWVTRSGWYHLDQNFNRNPNLECYQGLLNFFPAEAATGATVVVPKSHRRFQEVFQNRGAGGSDFVNLSSDADFGSFCTAAVQAALGPGDFLAWDSRVIHCSQGVDLARGEAAALPG-REGAPLARLAAFVCMVPAETLGAE--ARRGSRGARREFFQLGLTSGHNP 879 + FM +CR L V GVF TLWGT SDLVTSFDGC +RNPWA + P+ + T+ GW+HLDQN++ +P LE +QGLLNFFP ++G+TVV+P SH+ FQE + GGS FV ++ A A L PGDF+AWDSRV+HCS G+D +PG R +PL RL A++ M+P LGA+ R + ARR G SGH+P Sbjct: 1 SKFMSHCRQLSGVTGVFATLWGTTASDLVTSFDGCGTWRNPWACSST---PRKGYYTQGGWFHLDQNWHNSPGLETFQGLLNFFPTTESSGSTVVLPGSHKDFQENCRFAPGGGS-FVRMTYPGQKEYCEERASMALLEPGDFIAWDSRVVHCSSGIDPHASMDEVMPGERRHSPLTRLVAYISMLPRSRLGADQSTRERATAARRRAVVRGTGSGHDP 215
BLAST of mRNA_H-akashiwo_Contig98.7.1 vs. uniprot
Match: F0XZ61_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZ61_AURAN) HSP 1 Score: 186 bits (472), Expect = 3.210e-53 Identity = 119/310 (38.39%), Postives = 158/310 (50.97%), Query Frame = 1 Query: 1 PRVQVGDKEGAKVALDKYGVCIFSKVAEADQLAEAEHLFWSWIEGLGMGFNRNISESLAN--LEQLGYRGTGIISKYGIGQTDFMWYCRTLPKVRGVFETLWG---------TSDLVTSFDGCAAFRNPWARLESGEGPQTDWVTRSGWYHLDQNFNRNPNLECYQGLLNFFPAEAATGATVVVPKSHRRFQEVFQNRG-AGGSDFVNLSSDADFGSFC--TAAVQAALGPGDFLAWDSRVIHCSQGV--DLARGEAAALPGREGAP-LARLAAFVCMVPAETLGAEARRGSRGARREFFQLGLTSGHNP 879 P +GD L ++GV +F V AD + E LFW W+E G +R + A + LG+R +G+++ IGQ+D +W R V + T+WG T LVTSFDGC +RNP +G+ + T WYHLDQNF +P YQG L + A+ TG+TVV P SH++F E G AG FV ++ D +C TA A LGPGD++ WDSRV+HCS G +LA A G P L RLA +V M+P E GA ARR + G TSGH+P Sbjct: 25 PVCAIGDASRCAALLKRFGVVVFRGVVPADDRSRLESLFWDWLEREHEGVDRARPATHAPRVFDSLGHRNSGVVNTGSIGQSDLLWAARQHAGVVDAWRTVWGLDMTEPAATTRQLVTSFDGCGVWRNPCHPAHAGKA---NVRTAQSWYHLDQNFATHPGFVGYQGALTVWGADGHTGSTVVCPGSHKQFAENCARGGKAGRGSFVRMAGRGD-AEYCARTARQVAPLGPGDYVIWDSRVVHCSNGASRNLAPHHVLAARGVSEQPSLLRLALYVAMMPRERAGAHVVE----ARRRAVRRGATSGHDP 326
BLAST of mRNA_H-akashiwo_Contig98.7.1 vs. uniprot
Match: A0A7S2TW86_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TW86_9EUKA) HSP 1 Score: 160 bits (404), Expect = 2.430e-44 Identity = 79/206 (38.35%), Postives = 123/206 (59.71%), Query Frame = 1 Query: 13 VGDKEGAKVALDKYGVCIFSKVAEADQLAEAEHLFWSWIEGLGMGFNRNISESLAN--LEQLGYRGTGIISKYGIGQTDFMWYCRTLPKVRGVFETLWGTSDLVTSFDGCAAFRNPWARLESGEGPQTDWVTRSGWYHLDQNFNRNPNLECYQGLLNFFPAEAATGATVVVPKSH-RRFQEVFQNRGAGG----SDFVNLSSDADF 609 V + + A+ L ++G CI A+ ++ +A+ F SW+ G+ +S+ + LG+ TG+++++ IG +D +WYCRTL V+ VF+ LWGT DL+TSFDG A RNP+ G+ +++W T+ GW+HLDQN P + +QGLLN FPA A TG+TVVVP+SH +F ++F++ F+ L+ DF Sbjct: 39 VSESKRARDILAEWGFCIVKGAAKPLEVEKAKEHFMSWLRKAGINCKAGDWKSIDGDKWKSLGFPKTGVMTQFAIGHSDLLWYCRTLEGVQKVFQDLWGTEDLITSFDGAGAARNPFYAAGGGQQGRSEWCTQGGWFHLDQNAKVTPGFDLWQGLLNLFPASANTGSTVVVPRSHIEKFPKIFKDSHRRNMKKRGHFIMLNKGGDF 244
BLAST of mRNA_H-akashiwo_Contig98.7.1 vs. uniprot
Match: A0A7S3NKM9_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NKM9_9STRA) HSP 1 Score: 158 bits (399), Expect = 1.240e-41 Identity = 109/307 (35.50%), Postives = 148/307 (48.21%), Query Frame = 1 Query: 1 PRVQVGDKEGAKVALDKYGVCIFSKVAEADQLAEAEHLFWSWIEGLGMGFNRNISESLANLEQ-LGYRGTGIISKYGIGQTDFMWYCRTLPKVRGVFETLWGTSDLVTSFDGCAAFRNPWARLESGEGPQTDWVTRSGWYHLDQNFNRNPNLECYQGLLNFFP-AEAATGATVVVPKSHRRFQEVFQ--NRGAGGSDFVNLSSDADFGSFCTAAVQAA-LGPGDFLAWDSRVIHCSQGVDLARGEAAALPG-----------REGAP--LARLAAFVCMVPAETLGAEARRGSRGARREFFQLGLTS 867 P Q+GD K L ++GV IF V AD++ A LFW W E S + + Q G+ TG+ + + IGQ++F+WYCR K + T+W DLV+SFDGC +RNP+ +D T WYHLDQN N + YQGL+ A TG+ VV+P SH+ F+ + N+ FV LS+ AD AVQ A L PGD + WDSRV+HCS V +L G E +P LARL A+V M+P + + R A + + G S Sbjct: 113 PICQIGDVHTCKQLLAEHGVVIFRNVLNADEIQVARDLFWQWFETHTPARRTKPSTLTSAVAQSCGHANTGVTTNFCIGQSEFLWYCRL--KAVPAWRTVWDCEDLVSSFDGCGLWRNPYLF--------SDAFTHGRWYHLDQNVRENAHFLGYQGLVQISDTATDETGSLVVIPGSHKDFRANCERGNKLLNRGSFVRLSTPADLAYCDQHAVQCAPLYPGDIVVWDSRVVHCSASVCRNLPSTHSLRGGRTFFSSKFSDNEISPPMLARLVAYVAMMPRSHVSSRVATNRRNAVLQGYGSGWNS 409
BLAST of mRNA_H-akashiwo_Contig98.7.1 vs. uniprot
Match: A0A6B2LB10_9EUKA (Uncharacterized protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LB10_9EUKA) HSP 1 Score: 152 bits (384), Expect = 6.130e-41 Identity = 98/265 (36.98%), Postives = 133/265 (50.19%), Query Frame = 1 Query: 112 LFWSWIEGLGMGFNRNISESLANLEQLGYRGTGIISKYGIGQTDFMWYCRTLPKVRGVFETLWGTSDLVTSFDGCAAFRNPWARLESGEGPQTDWVTRSGW-YHLDQNFNRNPNLECYQGLLNFFPAEAATGATVVVPKSHRR-FQEVFQNRGAGGSDFVNLSSDADFGSFCTAAVQAALGP-------GDFLAWDSRVIHCSQGVDLARGEAAALPGREGAPLARLAAFVCMVPAETLGAEARRGSRGARREFFQLGLTSGHNP 879 L W ++EGLG+G +RN S + + G GI+ G+GQ++ MWY R+LP +R +F +WGTS+L TSFDGC W E Q+ W T S YHLDQN P+ C QG LN PA G V+VP+SH + ++F+N G SD++ L + QA L P GDF+ WDSR+IHC+ + R +P + P RL +VCM P L E RR + G T+ H P Sbjct: 4 LAWDFLEGLGLGIHRNDISSWSTPKWPDPFGNGILCGDGVGQSELMWYARSLPPIRTIFSKIWGTSELATSFDGCCF----WRAFEY----QSAWKTHSARAYHLDQNGVTKPSKCCVQGFLNVLPAGPGDGGLVIVPRSHTTVYPQIFKNF-KGRSDWIPLHNHRPLWE--EMIPQAGLAPIKVCAEAGDFVVWDSRIIHCNGAGHVPRE----VPADQVLPPRRLVTYVCMTPKSRLRGEVVE----ERRRCYLNGDTTNHWP 249
BLAST of mRNA_H-akashiwo_Contig98.7.1 vs. uniprot
Match: A0A817SS97_9BILA (Hypothetical protein n=2 Tax=Rotaria sp. Silwood2 TaxID=2762512 RepID=A0A817SS97_9BILA) HSP 1 Score: 145 bits (367), Expect = 1.000e-38 Identity = 81/219 (36.99%), Postives = 121/219 (55.25%), Query Frame = 1 Query: 43 LDKYGVCIFSKVAEADQLAEAEHLFWSWIEGLGMGFNRNISESLANLEQL-GYRGTGIISKYGIGQTDFMWYCRTLPKVRGVFETLWGTSDLVTSFDGCAAFRNPWARLESGEGPQTDWVTRSGWYHLDQNFNRNPNLECYQGLLNFFPAEAATGATVVVPKSHRRFQEVFQNRGAGGSDFVNL-SSDADFGSFCTAAVQAALGPGDFLAWDSRVIHCS 693 L++YG +FS V E D++ E ++L W ++E L FNR + + G R G+ + YG+GQ+ FMW R+ +V+ V+E LW SDL+ SF+GC FR+ W+ ++ W T SGW H+DQN + PN C QG ++ +TG +V P+SH RF E+ + G+ DFV + S+ F GDF+ WDSR+IHC+ Sbjct: 34 LNQYGYAVFSDVMELDKVEENKNLLWQFLETLPPPFNRIRRDRPSTWNHWPGIRSHGVTNTYGLGQSAFMWNIRSNREVKRVYERLWNRSDLLVSFEGCGIFRD-WSYNQT-------WKTESGWNHIDQNPDSKPNRCCVQGFVSLTDQSESTGGLIVFPRSHLRFSEL-RGLGSKARDFVIVPSTHPIFDEGRAIGKLVHCHAGDFVLWDSRLIHCN 243
BLAST of mRNA_H-akashiwo_Contig98.7.1 vs. uniprot
Match: A0A7R9UVF0_DIALT (Hypothetical protein (Fragment) n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9UVF0_DIALT) HSP 1 Score: 147 bits (371), Expect = 1.860e-38 Identity = 106/300 (35.33%), Postives = 147/300 (49.00%), Query Frame = 1 Query: 4 RVQVGDKEGAKVALDKYGVCIFSKVAEADQLAEAEHLFWSWIEGLGMGFNRNISESLANLEQLGYRGTGIISKYGIGQTDFMWYCRTLPKVRGVFETLWGTSD--LVTSFDGCAAFRNPWARLESGEGPQTDWVTRSGWYHLDQNFNRNPNLECYQGLLNFFPAEAATGATVVVPKSHRRFQEVFQNRGAGGSDFVNLSSDADF-----GSFCTAAVQAALGPGDFLAWDSRVIHCSQGVDLARGEAAALPGREGAP-LARLAAFVCMVPAETLGAEARRGSRGARREFFQLGLTSGHNP 879 R + + +G K L + G C+ + VA AD+ A AE LFW+W+E + N + + ++ R TGI+S GIGQ++F W R+LP V F +WG D L++SFDG FR P+ R +G D T GW+H+DQ+ + L QGL++ + AATG V+P +HR EV D+V+L+ D A+ G GD L WDSRV+HC+ E +G P L RLAA+VCM A R R R +LG TS H P Sbjct: 25 RFSIANADGWKRHLSEEGYCVIASVANADECANAERLFWAWVEAVEPRVNPEDAATWRHIPCS--RFTGIVSSGGIGQSEFAWRLRSLPAVVRAFAQIWGCDDRSLISSFDGANCFR-PF-RAPAGAA---DLATSGGWWHIDQSAAKQ-GLHAVQGLVSVTASTAATGGLCVLPGTHREHAEVSGRYAHVKQDYVHLARDDPLLARVRDGHGPGALLVTCGAGDLLLWDSRVVHCNTPALRQAPE-------QGTPRLLRLAAYVCMTERSRADAVTLRARR---RAVDELG-TSTHWP 305 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig98.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig98.7.1 >prot_H-akashiwo_Contig98.7.1 ID=prot_H-akashiwo_Contig98.7.1|Name=mRNA_H-akashiwo_Contig98.7.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=293bp PRVQVGDKEGAKVALDKYGVCIFSKVAEADQLAEAEHLFWSWIEGLGMGFback to top mRNA from alignment at H-akashiwo_Contig98:573760..574638- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig98.7.1 ID=mRNA_H-akashiwo_Contig98.7.1|Name=mRNA_H-akashiwo_Contig98.7.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=879bp|location=Sequence derived from alignment at H-akashiwo_Contig98:573760..574638- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig98:573760..574638- >mRNA_H-akashiwo_Contig98.7.1 ID=mRNA_H-akashiwo_Contig98.7.1|Name=mRNA_H-akashiwo_Contig98.7.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=879bp|location=Sequence derived from alignment at H-akashiwo_Contig98:573760..574638- (Heterosigma akashiwo CCMP452)back to top |