mRNA_H-akashiwo_Contig797.7.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig797.7.1 vs. uniprot
Match: A0A7S4D527_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D527_HETAK) HSP 1 Score: 124 bits (311), Expect = 5.610e-34 Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 1 Query: 1 GPLPVNPGAEKCKFYMDNGKCRFGSKCKYDHPPEVLQEINAKLAHTTLGPHGL 159 GPLPVNPGAEKCKFYMDNGKCRFGSKCKYDHPPEVLQEINAKLAHTTLGPHGL Sbjct: 47 GPLPVNPGAEKCKFYMDNGKCRFGSKCKYDHPPEVLQEINAKLAHTTLGPHGL 99
BLAST of mRNA_H-akashiwo_Contig797.7.1 vs. uniprot
Match: D6MKI6_9ASPA (Transcription factor (Fragment) n=1 Tax=Lycoris longituba TaxID=272140 RepID=D6MKI6_9ASPA) HSP 1 Score: 66.2 bits (160), Expect = 4.030e-12 Identity = 29/67 (43.28%), Postives = 37/67 (55.22%), Query Frame = 1 Query: 7 LPVNPGAEKCKFYMDNGKCRFGSKCKYDHPPEVLQEINAKLAHTTLGPHGLPLRPGEQGCYLFQQSG 207 LP P +C++YM G C++G+ CKY HP E E + TLGP GLPLRPG C + G Sbjct: 85 LPERPDQPECQYYMKTGSCKYGTNCKYHHPKESYTE-----SPFTLGPLGLPLRPGHAICTFYTMYG 146
BLAST of mRNA_H-akashiwo_Contig797.7.1 vs. uniprot
Match: A0A4P1RMT6_LUPAN (Uncharacterized protein n=3 Tax=Lupinus angustifolius TaxID=3871 RepID=A0A4P1RMT6_LUPAN) HSP 1 Score: 67.0 bits (162), Expect = 2.240e-11 Identity = 28/61 (45.90%), Postives = 38/61 (62.30%), Query Frame = 1 Query: 7 LPVNPGAEKCKFYMDNGKCRFGSKCKYDHPPEVLQEINAKLAHTTLGPHGLPLRPGEQGCY 189 LP P +C++YM G+C+FGS C+Y HPP++ +A A TL P GLPLRP + Y Sbjct: 307 LPERPDQPECQYYMRTGECKFGSSCRYHHPPDM----SASKATVTLSPAGLPLRPERRSLY 363
BLAST of mRNA_H-akashiwo_Contig797.7.1 vs. uniprot
Match: A0A7S3XQZ8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQZ8_HETAK) HSP 1 Score: 66.6 bits (161), Expect = 2.940e-11 Identity = 24/46 (52.17%), Postives = 34/46 (73.91%), Query Frame = 1 Query: 7 LPVNPGAEKCKFYMDNGKCRFGSKCKYDHPPEVLQEINAKLAHTTL 144 LP++PG E C FY+ NGKC++G CK+DHP +L+EI K++ T L Sbjct: 246 LPLHPGQEPCTFYVQNGKCKYGVACKFDHPVAILEEIKTKVSATVL 291
BLAST of mRNA_H-akashiwo_Contig797.7.1 vs. uniprot
Match: A0A059B4D7_EUCGR (Uncharacterized protein n=1 Tax=Eucalyptus grandis TaxID=71139 RepID=A0A059B4D7_EUCGR) HSP 1 Score: 66.6 bits (161), Expect = 3.260e-11 Identity = 28/63 (44.44%), Postives = 36/63 (57.14%), Query Frame = 1 Query: 7 LPVNPGAEKCKFYMDNGKCRFGSKCKYDHPPEVLQEINAKLAHTTLGPHGLPLRPGEQGCYLF 195 PV PG +C+ Y+ G CR+GS CKY HPP+ NA + L P GLP++PG C F Sbjct: 313 FPVRPGQPECQHYLKTGDCRYGSSCKYHHPPDW----NALNVNIVLSPTGLPIQPGAPPCMHF 371
BLAST of mRNA_H-akashiwo_Contig797.7.1 vs. uniprot
Match: UPI0011D2AC1F (zinc finger CCCH domain-containing protein 58-like n=1 Tax=Syzygium oleosum TaxID=219896 RepID=UPI0011D2AC1F) HSP 1 Score: 66.6 bits (161), Expect = 3.260e-11 Identity = 28/63 (44.44%), Postives = 35/63 (55.56%), Query Frame = 1 Query: 7 LPVNPGAEKCKFYMDNGKCRFGSKCKYDHPPEVLQEINAKLAHTTLGPHGLPLRPGEQGCYLF 195 P PG +C+ YM G C++GS CKY HPP+ +NA + L P GLP RPG C F Sbjct: 309 FPERPGQPECQHYMKTGDCKYGSSCKYHHPPD----LNALNVNFVLSPTGLPFRPGAPPCMHF 367
BLAST of mRNA_H-akashiwo_Contig797.7.1 vs. uniprot
Match: UPI00192ED5DB (zinc finger CCCH domain-containing protein 34 isoform X1 n=2 Tax=Eucalyptus grandis TaxID=71139 RepID=UPI00192ED5DB) HSP 1 Score: 66.6 bits (161), Expect = 3.300e-11 Identity = 28/63 (44.44%), Postives = 36/63 (57.14%), Query Frame = 1 Query: 7 LPVNPGAEKCKFYMDNGKCRFGSKCKYDHPPEVLQEINAKLAHTTLGPHGLPLRPGEQGCYLF 195 PV PG +C+ Y+ G CR+GS CKY HPP+ NA + L P GLP++PG C F Sbjct: 489 FPVRPGQPECQHYLKTGDCRYGSSCKYHHPPDW----NALNVNIVLSPTGLPIQPGAPPCMHF 547
BLAST of mRNA_H-akashiwo_Contig797.7.1 vs. uniprot
Match: A0A6A2YPC4_HIBSY (Zinc finger CCCH domain-containing protein 34 n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2YPC4_HIBSY) HSP 1 Score: 65.5 bits (158), Expect = 7.120e-11 Identity = 28/58 (48.28%), Postives = 35/58 (60.34%), Query Frame = 1 Query: 7 LPVNPGAEKCKFYMDNGKCRFGSKCKYDHPPEVLQEINAKLAHTTLGPHGLPLRPGEQ 180 P PG +C++YM G+C++GS C+Y HPPEV A L P GLPLRP EQ Sbjct: 286 FPERPGQPECQYYMKTGRCKYGSSCRYHHPPEVF----APKKDVILSPLGLPLRPIEQ 339
BLAST of mRNA_H-akashiwo_Contig797.7.1 vs. uniprot
Match: A0A2K1L7Z1_PHYPA (Uncharacterized protein n=8 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1L7Z1_PHYPA) HSP 1 Score: 65.5 bits (158), Expect = 8.430e-11 Identity = 29/79 (36.71%), Postives = 40/79 (50.63%), Query Frame = 1 Query: 7 LPVNPGAEKCKFYMDNGKCRFGSKCKYDHPPEVLQEINAKLAH------------TTLGPHGLPLRPGEQGCYLFQQSG 207 LP P C ++M G+CR+GSKC+++HP E L+ N TT GLPLRPGE C + ++G Sbjct: 150 LPQRPTEPDCAYFMKTGECRYGSKCRFNHPKEKLESSNTDEQSSVVNQAAPINPATTFNSKGLPLRPGEGNCVFYGKTG 228
BLAST of mRNA_H-akashiwo_Contig797.7.1 vs. uniprot
Match: UPI00092F9318 (zinc finger CCCH domain-containing protein 34-like isoform X3 n=1 Tax=Lupinus angustifolius TaxID=3871 RepID=UPI00092F9318) HSP 1 Score: 64.7 bits (156), Expect = 1.410e-10 Identity = 27/55 (49.09%), Postives = 36/55 (65.45%), Query Frame = 1 Query: 7 LPVNPGAEKCKFYMDNGKCRFGSKCKYDHPPEVLQEINAKLAHTTLGPHGLPLRP 171 LP P +C++YM G+C+FGS C+Y HPP++ +A A TL P GLPLRP Sbjct: 307 LPERPDQPECQYYMRTGECKFGSSCRYHHPPDM----SASKATVTLSPAGLPLRP 357 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig797.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig797.7.1 >prot_H-akashiwo_Contig797.7.1 ID=prot_H-akashiwo_Contig797.7.1|Name=mRNA_H-akashiwo_Contig797.7.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=69bp GPLPVNPGAEKCKFYMDNGKCRFGSKCKYDHPPEVLQEINAKLAHTTLGPback to top mRNA from alignment at H-akashiwo_Contig797:261084..261493+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig797.7.1 ID=mRNA_H-akashiwo_Contig797.7.1|Name=mRNA_H-akashiwo_Contig797.7.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=410bp|location=Sequence derived from alignment at H-akashiwo_Contig797:261084..261493+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig797:261084..261493+ >mRNA_H-akashiwo_Contig797.7.1 ID=mRNA_H-akashiwo_Contig797.7.1|Name=mRNA_H-akashiwo_Contig797.7.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=207bp|location=Sequence derived from alignment at H-akashiwo_Contig797:261084..261493+ (Heterosigma akashiwo CCMP452)back to top |