mRNA_H-akashiwo_Contig1112.5.1 (mRNA) Heterosigma akashiwo CCMP452
|
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1112.5.1 vs. uniprot
Match: A0A7S1UJY0_9STRA (Protein yippee-like n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UJY0_9STRA) HSP 1 Score: 171 bits (432), Expect = 6.170e-53 Identity = 76/113 (67.26%), Postives = 96/113 (84.96%), Query Frame = 1
Query: 1 MGRIFKRYLDCPEIYTCIDCGTHVSSNGQIISRSFHGRGGRAYLFDTAMNLTYGPPEQRNLLTGLHIVCDIYCICCQNLLGWKYEEAFEESQKYKVGKFILEKTKLGRYNNWS 339
MGRIF+RYL+ P+IY C CGTH+S+N QIISR+FHGRGGRA+LF+TA+N++ GPPE+R L+TG+H+V DIYCI CQ L+GW YE+AFE +QKYK GKFILEKTK+ + WS
Sbjct: 1 MGRIFRRYLEGPKIYCCEGCGTHLSTNDQIISRAFHGRGGRAFLFNTAINVSTGPPERRMLITGMHVVADIYCIQCQALIGWTYEQAFEPTQKYKEGKFILEKTKISKVE-WS 112
BLAST of mRNA_H-akashiwo_Contig1112.5.1 vs. uniprot
Match: A0A7S2SVP3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SVP3_9STRA) HSP 1 Score: 167 bits (423), Expect = 6.180e-51 Identity = 73/113 (64.60%), Postives = 98/113 (86.73%), Query Frame = 1
Query: 1 MGRIFKRYLDCPEIYTCIDCGTHVSSNGQIISRSFHGRGGRAYLFDTAMNLTYGPPEQRNLLTGLHIVCDIYCICCQNLLGWKYEEAFEESQKYKVGKFILEKTKLGRYNNWS 339
MGR+ + +L+ P+I+ C++C TH+S+N +IIS++FHGRGGRAYLFDTA+N++ GP E+R L+TGLHIVCD+YCI C +++GWKYEEAFEESQKYKVGKFILEK KL + +W+
Sbjct: 30 MGRLHRVHLEGPDIFVCVECRTHLSTNDKIISKAFHGRGGRAYLFDTAVNVSTGPLEKRVLITGLHIVCDLYCISCGSVVGWKYEEAFEESQKYKVGKFILEKPKLAK-EDWA 141
BLAST of mRNA_H-akashiwo_Contig1112.5.1 vs. uniprot
Match: A0A835Z468_9STRA (Protein yippee-like n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z468_9STRA) HSP 1 Score: 163 bits (413), Expect = 3.540e-50 Identity = 70/106 (66.04%), Postives = 91/106 (85.85%), Query Frame = 1
Query: 1 MGRIFKRYLDCPEIYTCIDCGTHVSSNGQIISRSFHGRGGRAYLFDTAMNLTYGPPEQRNLLTGLHIVCDIYCICCQNLLGWKYEEAFEESQKYKVGKFILEKTKL 318
MGRIFKRYL+ P+IY+C++CGTH ++ IIS +FHGRGGRA+LF+ A+N+T GP E+R L+TG+H V DIYC+ CQ+L+GW+YE AFEESQKYK GKFILEKT++
Sbjct: 1 MGRIFKRYLEGPQIYSCLECGTHFTTKQDIISENFHGRGGRAFLFNQAVNVTQGPLEKRMLITGMHTVADIYCVDCQSLVGWRYERAFEESQKYKEGKFILEKTRM 106
BLAST of mRNA_H-akashiwo_Contig1112.5.1 vs. uniprot
Match: A0A7R9U7K2_9STRA (Protein yippee-like n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U7K2_9STRA) HSP 1 Score: 163 bits (412), Expect = 6.460e-50 Identity = 74/113 (65.49%), Postives = 93/113 (82.30%), Query Frame = 1
Query: 1 MGRIFKRYLDCPEIYTCIDCGTHVSSNGQIISRSFHGRGGRAYLFDTAMNLTYGPPEQRNLLTGLHIVCDIYCICCQNLLGWKYEEAFEESQKYKVGKFILEKTKLGRYNNWS 339
MGRIF+RYL+ P+IY C CGTH+S+N QIISR F GRGG+AYLF+ A+N+ GP E+R L+TGLH+V DIYCI C++L+GW YEEAF+ SQKYK GKFILEKTK+ + + WS
Sbjct: 1 MGRIFRRYLEGPKIYCCSTCGTHLSTNDQIISRRFRGRGGQAYLFNRAVNVMTGPSERRVLITGLHVVADIYCIQCESLIGWTYEEAFDRSQKYKEGKFILEKTKITK-SEWS 112
BLAST of mRNA_H-akashiwo_Contig1112.5.1 vs. uniprot
Match: A0A5B8MU59_9CHLO (Protein yippee-like n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MU59_9CHLO) HSP 1 Score: 155 bits (393), Expect = 4.210e-47 Identity = 66/112 (58.93%), Postives = 87/112 (77.68%), Query Frame = 1
Query: 1 MGRIFKRYLDCPEIYTCIDCGTHVSSNGQIISRSFHGRGGRAYLFDTAMNLTYGPPEQRNLLTGLHIVCDIYCICCQNLLGWKYEEAFEESQKYKVGKFILEKTKLGRYNNW 336
MGR+FK+YL+ P IY+C +C H S + +I+S++F GR GRAYLF+ +N+T GP E R L+TGLH V DIYC CCQ +LGWKYE+AFEESQKYK GK+I+EK K+ + +W
Sbjct: 1 MGRLFKQYLNGPRIYSCSNCRCHTSDHDEIVSKAFQGRHGRAYLFNNVVNVTLGPKEDRLLITGLHTVADIYCSCCQQVLGWKYEQAFEESQKYKEGKYIIEKAKMVKEGSW 112
BLAST of mRNA_H-akashiwo_Contig1112.5.1 vs. uniprot
Match: A0A7S0WSD2_9CHLO (Protein yippee-like n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0WSD2_9CHLO) HSP 1 Score: 154 bits (388), Expect = 2.430e-46 Identity = 67/112 (59.82%), Postives = 85/112 (75.89%), Query Frame = 1
Query: 1 MGRIFKRYLDCPEIYTCIDCGTHVSSNGQIISRSFHGRGGRAYLFDTAMNLTYGPPEQRNLLTGLHIVCDIYCICCQNLLGWKYEEAFEESQKYKVGKFILEKTKLGRYNNW 336
MGR+FK+YL P IY+C +C TH + + +IIS+SF GR GRA+LF +N+T GP E R L+TGLH V DIYC CCQ +LGWKYE+AFEE+QKYK GKFI+EK K+ + W
Sbjct: 1 MGRLFKQYLSGPRIYSCSNCRTHSADHDEIISKSFQGRHGRAFLFSNVVNVTLGPKEDRLLITGLHTVADIYCSCCQAVLGWKYEQAFEENQKYKEGKFIVEKAKMMKEGTW 112
BLAST of mRNA_H-akashiwo_Contig1112.5.1 vs. uniprot
Match: E1ZGW0_CHLVA (Protein yippee-like n=3 Tax=Chlorella clade TaxID=2511126 RepID=E1ZGW0_CHLVA) HSP 1 Score: 150 bits (380), Expect = 4.020e-45 Identity = 66/112 (58.93%), Postives = 84/112 (75.00%), Query Frame = 1
Query: 1 MGRIFKRYLDCPEIYTCIDCGTHVSSNGQIISRSFHGRGGRAYLFDTAMNLTYGPPEQRNLLTGLHIVCDIYCICCQNLLGWKYEEAFEESQKYKVGKFILEKTKLGRYNNW 336
MG +FK+YL +IYTC C TH + +GQ+IS++F GR GRAYLF +N+T GP E R L+TGLH VCD YCI C ++LGWKYE A+EESQKYK GK+ILEK K+ + +W
Sbjct: 1 MGVLFKQYLSGDKIYTCSQCKTHCTDHGQLISKAFQGRHGRAYLFSDVVNVTLGPREDRMLITGLHTVCDCYCITCNSVLGWKYEVAYEESQKYKEGKYILEKAKVQKEGSW 112
BLAST of mRNA_H-akashiwo_Contig1112.5.1 vs. uniprot
Match: A0A2D4BE37_PYTIN (Protein yippee-like n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BE37_PYTIN) HSP 1 Score: 148 bits (374), Expect = 3.100e-44 Identity = 62/108 (57.41%), Postives = 84/108 (77.78%), Query Frame = 1
Query: 1 MGRIFKRYLDCPEIYTCIDCGTHVSSNGQIISRSFHGRGGRAYLFDTAMNLTYGPPEQRNLLTGLHIVCDIYCICCQNLLGWKYEEAFEESQKYKVGKFILEKTKLGR 324
MGR+FK+YL+ ++++C +C TH+SS I+S++FHGR G+AYLFD +N+T GPPE+R L+TGLH+V D+YC C N LGWKYEEA EE +KYK+GK +LE K R
Sbjct: 1 MGRVFKQYLESSKVFSCRECKTHLSSADAIVSKTFHGRTGKAYLFDKCVNITTGPPEERMLMTGLHVVVDVYCNTCWNHLGWKYEEAHEEKEKYKIGKIVLELAKTNR 108
BLAST of mRNA_H-akashiwo_Contig1112.5.1 vs. uniprot
Match: A0A6A5BX87_NAEFO (Protein yippee-like n=2 Tax=Naegleria TaxID=5761 RepID=A0A6A5BX87_NAEFO) HSP 1 Score: 148 bits (373), Expect = 4.980e-44 Identity = 62/112 (55.36%), Postives = 89/112 (79.46%), Query Frame = 1
Query: 1 MGRIFKRYLDCPEIYTCIDCGTHVSSNGQIISRSFHGRGGRAYLFDTAMNLTYGPPEQRNLLTGLHIVCDIYCICCQNLLGWKYEEAFEESQKYKVGKFILEKTKLGRYNNW 336
MGR++ +YL+ IY C +C +H+S N +IIS+ FHGR G+AYLF+ A+N+T GP E+R L+TGLH+VCDIYC+ C+ +GWKY++A+E S++YKVGKF+LEK KL + N +
Sbjct: 1 MGRLYLKYLNGSSIYVCSNCNSHLSMNDEIISKHFHGRFGKAYLFNKAINVTTGPCEERQLMTGLHVVCDIYCVNCKANVGWKYKKAYESSEQYKVGKFVLEKAKLKKENTF 112
BLAST of mRNA_H-akashiwo_Contig1112.5.1 vs. uniprot
Match: A0A1Y1IRS2_KLENI (Protein yippee-like n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IRS2_KLENI) HSP 1 Score: 149 bits (375), Expect = 6.230e-44 Identity = 64/112 (57.14%), Postives = 87/112 (77.68%), Query Frame = 1
Query: 1 MGRIFKRYLDCPEIYTCIDCGTHVSSNGQIISRSFHGRGGRAYLFDTAMNLTYGPPEQRNLLTGLHIVCDIYCICCQNLLGWKYEEAFEESQKYKVGKFILEKTKLGRYNNW 336
MGRIF++YL+ P IY+C +C H + + +IIS+ F GR GRAYLF++ +N+T GP E R+L TGLH V DIYC CCQ +LGWKYE+A++ESQKYK GK+I+EK ++ + NW
Sbjct: 34 MGRIFRQYLNGPRIYSCSNCRCHSADHDEIISKQFQGRYGRAYLFNSVVNVTLGPKEDRHLTTGLHTVADIYCSCCQQILGWKYEQAYDESQKYKEGKYIIEKARMMK-ENW 144 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1112.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1112.5.1 >prot_H-akashiwo_Contig1112.5.1 ID=prot_H-akashiwo_Contig1112.5.1|Name=mRNA_H-akashiwo_Contig1112.5.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=114bp MGRIFKRYLDCPEIYTCIDCGTHVSSNGQIISRSFHGRGGRAYLFDTAMNback to top mRNA from alignment at H-akashiwo_Contig1112:142489..142830- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1112.5.1 ID=mRNA_H-akashiwo_Contig1112.5.1|Name=mRNA_H-akashiwo_Contig1112.5.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=342bp|location=Sequence derived from alignment at H-akashiwo_Contig1112:142489..142830- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1112:142489..142830- >mRNA_H-akashiwo_Contig1112.5.1 ID=mRNA_H-akashiwo_Contig1112.5.1|Name=mRNA_H-akashiwo_Contig1112.5.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=342bp|location=Sequence derived from alignment at H-akashiwo_Contig1112:142489..142830- (Heterosigma akashiwo CCMP452)back to top |