prot_H-akashiwo_Contig94.40.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig94.40.1
Unique Nameprot_H-akashiwo_Contig94.40.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length104
Homology
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BLAST of mRNA_H-akashiwo_Contig94.40.1 vs. uniprot
Match: A0A7S3Y5F7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y5F7_HETAK)

HSP 1 Score: 72.0 bits (175), Expect = 3.120e-14
Identity = 33/49 (67.35%), Postives = 37/49 (75.51%), Query Frame = 0 
Query:   43 GCLSLGLGSEACCSHLVVPVIIPCSVARSCVPLQQDGVRDHIGCHACGL 91
            G   LG+G +ACC HL +PV+  CSVA S VPLQQ GVRD IGCHACGL
Sbjct:   57 GAEGLGVGPDACCHHLTIPVLALCSVACSGVPLQQGGVRDLIGCHACGL 105
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig94.40.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7S3Y5F7_HETAK3.120e-1467.35Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..34
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 17..31
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..16

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig94contigH-akashiwo_Contig94:1769955..1770266 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig94.40.1mRNA_H-akashiwo_Contig94.40.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig94 1769955..1770268 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig94.40.1 ID=prot_H-akashiwo_Contig94.40.1|Name=mRNA_H-akashiwo_Contig94.40.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=104bp
GCVSGSSTRTSCPSDTAPSPSVPPPVWELSSPPRSPVSAQPAGCLSLGLG
SEACCSHLVVPVIIPCSVARSCVPLQQDGVRDHIGCHACGLHAAKPLLHQ
VCVP
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