prot_H-akashiwo_Contig9.77.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig9.77.1
Unique Nameprot_H-akashiwo_Contig9.77.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length58
Homology
BLAST of mRNA_H-akashiwo_Contig9.77.1 vs. uniprot
Match: A0A6V1LYK6_HETAK (Hypothetical protein n=2 Tax=Sar TaxID=2698737 RepID=A0A6V1LYK6_HETAK)

HSP 1 Score: 115 bits (287), Expect = 7.510e-32
Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 0
Query:    1 MRKTPNGEGSKTWDRLQMRIHKRIIDLHSPSEIVKQITSISIEPGVDVEVTLAENEA 57
            MRKTPNGEGSKTWDRLQMRIHKRIIDLHSPSEIVKQITSISIEPGVDVEVTLAENEA
Sbjct:   64 MRKTPNGEGSKTWDRLQMRIHKRIIDLHSPSEIVKQITSISIEPGVDVEVTLAENEA 120          
BLAST of mRNA_H-akashiwo_Contig9.77.1 vs. uniprot
Match: A0A4Q0A2C9_9FUNG (40S ribosomal protein S20 n=1 Tax=Dimargaris cristalligena TaxID=215637 RepID=A0A4Q0A2C9_9FUNG)

HSP 1 Score: 104 bits (259), Expect = 1.410e-27
Identity = 49/54 (90.74%), Postives = 53/54 (98.15%), Query Frame = 0
Query:    2 RKTPNGEGSKTWDRLQMRIHKRIIDLHSPSEIVKQITSISIEPGVDVEVTLAEN 55
            RKTPNGEG+KTWDR QMRIHKR+IDLHSPSEIVKQITSISIEPGV+VEVT+AEN
Sbjct:   68 RKTPNGEGTKTWDRFQMRIHKRVIDLHSPSEIVKQITSISIEPGVEVEVTIAEN 121          
BLAST of mRNA_H-akashiwo_Contig9.77.1 vs. uniprot
Match: A0A5E4QJI7_9NEOP (40S ribosomal protein S20 n=1 Tax=Leptidea sinapis TaxID=189913 RepID=A0A5E4QJI7_9NEOP)

HSP 1 Score: 99.8 bits (247), Expect = 3.230e-26
Identity = 46/53 (86.79%), Postives = 52/53 (98.11%), Query Frame = 0
Query:    2 RKTPNGEGSKTWDRLQMRIHKRIIDLHSPSEIVKQITSISIEPGVDVEVTLAE 54
            RKTP+GEGSKTWDR QMRIHKR+IDLHSPSEIVKQITSISI+PGVD+EVT+A+
Sbjct:   21 RKTPSGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSISIKPGVDIEVTIAD 73          
BLAST of mRNA_H-akashiwo_Contig9.77.1 vs. uniprot
Match: A0A1Y1XN71_9FUNG (40S ribosomal protein S20-like protein n=3 Tax=Zoopagomycota TaxID=1913638 RepID=A0A1Y1XN71_9FUNG)

HSP 1 Score: 100 bits (249), Expect = 4.680e-26
Identity = 47/53 (88.68%), Postives = 52/53 (98.11%), Query Frame = 0
Query:    2 RKTPNGEGSKTWDRLQMRIHKRIIDLHSPSEIVKQITSISIEPGVDVEVTLAE 54
            RKTPNGEGSKTWDR +MRIHKR+IDLHSPSEIVKQITSISIEPGV+VEVT+A+
Sbjct:   68 RKTPNGEGSKTWDRFEMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIAD 120          
BLAST of mRNA_H-akashiwo_Contig9.77.1 vs. uniprot
Match: M1XMM3_9METZ (40S ribosomal protein S20 n=1 Tax=Sycon ciliatum TaxID=27933 RepID=M1XMM3_9METZ)

HSP 1 Score: 100 bits (248), Expect = 6.110e-26
Identity = 47/53 (88.68%), Postives = 52/53 (98.11%), Query Frame = 0
Query:    2 RKTPNGEGSKTWDRLQMRIHKRIIDLHSPSEIVKQITSISIEPGVDVEVTLAE 54
            RKTPNGEGSKTWDR +MRIHKR+IDLHSPSEIVKQITSISIEPGV+VEVT+A+
Sbjct:   65 RKTPNGEGSKTWDRYEMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIAD 117          
BLAST of mRNA_H-akashiwo_Contig9.77.1 vs. uniprot
Match: A0A093T0K6_9PASS (40S ribosomal protein S20 (Fragment) n=3 Tax=Aves TaxID=8782 RepID=A0A093T0K6_9PASS)

HSP 1 Score: 98.2 bits (243), Expect = 7.270e-26
Identity = 47/53 (88.68%), Postives = 51/53 (96.23%), Query Frame = 0
Query:    2 RKTPNGEGSKTWDRLQMRIHKRIIDLHSPSEIVKQITSISIEPGVDVEVTLAE 54
            RKTP GEGSKTWDR QMRIHKR+IDLHSPSEIVKQITSISIEPGV+VEVT+A+
Sbjct:    8 RKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIAD 60          
BLAST of mRNA_H-akashiwo_Contig9.77.1 vs. uniprot
Match: UPI00052EF7B2 (40S ribosomal protein S20-like n=1 Tax=Tinamus guttatus TaxID=94827 RepID=UPI00052EF7B2)

HSP 1 Score: 98.2 bits (243), Expect = 8.060e-26
Identity = 47/53 (88.68%), Postives = 51/53 (96.23%), Query Frame = 0
Query:    2 RKTPNGEGSKTWDRLQMRIHKRIIDLHSPSEIVKQITSISIEPGVDVEVTLAE 54
            RKTP GEGSKTWDR QMRIHKR+IDLHSPSEIVKQITSISIEPGV+VEVT+A+
Sbjct:   12 RKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIAD 64          
BLAST of mRNA_H-akashiwo_Contig9.77.1 vs. uniprot
Match: A0A7R9PMY9_TIMGE (40S ribosomal protein S20 n=1 Tax=Timema genevievae TaxID=629358 RepID=A0A7R9PMY9_TIMGE)

HSP 1 Score: 98.6 bits (244), Expect = 1.130e-25
Identity = 47/53 (88.68%), Postives = 51/53 (96.23%), Query Frame = 0
Query:    2 RKTPNGEGSKTWDRLQMRIHKRIIDLHSPSEIVKQITSISIEPGVDVEVTLAE 54
            RKTP GEGSKTWDR QMRIHKR+IDLHSPSEIVKQITSISIEPGV+VEVT+A+
Sbjct:   37 RKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSISIEPGVEVEVTIAD 89          
BLAST of mRNA_H-akashiwo_Contig9.77.1 vs. uniprot
Match: A0A8I6RHN0_CIMLE (40S ribosomal protein S20 n=1 Tax=Cimex lectularius TaxID=79782 RepID=A0A8I6RHN0_CIMLE)

HSP 1 Score: 99.4 bits (246), Expect = 1.300e-25
Identity = 45/54 (83.33%), Postives = 52/54 (96.30%), Query Frame = 0
Query:    2 RKTPNGEGSKTWDRLQMRIHKRIIDLHSPSEIVKQITSISIEPGVDVEVTLAEN 55
            RKTP GEGSKTWDR QMR+HKR+IDLHSPSE+VKQITSIS+EPGV+VEVT+A+N
Sbjct:   67 RKTPCGEGSKTWDRFQMRVHKRVIDLHSPSEVVKQITSISLEPGVEVEVTIADN 120          
BLAST of mRNA_H-akashiwo_Contig9.77.1 vs. uniprot
Match: UPI001E27656C (40S ribosomal protein S20-like n=3 Tax=Harmonia axyridis TaxID=115357 RepID=UPI001E27656C)

HSP 1 Score: 100 bits (248), Expect = 1.480e-25
Identity = 47/54 (87.04%), Postives = 52/54 (96.30%), Query Frame = 0
Query:    2 RKTPNGEGSKTWDRLQMRIHKRIIDLHSPSEIVKQITSISIEPGVDVEVTLAEN 55
            RKTP GEGSKTWDR QMRIHKR+IDLHSPSE+VK+ITSISIEPGVDVEVT+AE+
Sbjct:   67 RKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEVVKEITSISIEPGVDVEVTIAES 120          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig9.77.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6V1LYK6_HETAK7.510e-32100.00Hypothetical protein n=2 Tax=Sar TaxID=2698737 Rep... [more]
A0A4Q0A2C9_9FUNG1.410e-2790.7440S ribosomal protein S20 n=1 Tax=Dimargaris crist... [more]
A0A5E4QJI7_9NEOP3.230e-2686.7940S ribosomal protein S20 n=1 Tax=Leptidea sinapis... [more]
A0A1Y1XN71_9FUNG4.680e-2688.6840S ribosomal protein S20-like protein n=3 Tax=Zoo... [more]
M1XMM3_9METZ6.110e-2688.6840S ribosomal protein S20 n=1 Tax=Sycon ciliatum T... [more]
A0A093T0K6_9PASS7.270e-2688.6840S ribosomal protein S20 (Fragment) n=3 Tax=Aves ... [more]
UPI00052EF7B28.060e-2688.6840S ribosomal protein S20-like n=1 Tax=Tinamus gut... [more]
A0A7R9PMY9_TIMGE1.130e-2588.6840S ribosomal protein S20 n=1 Tax=Timema genevieva... [more]
A0A8I6RHN0_CIMLE1.300e-2583.3340S ribosomal protein S20 n=1 Tax=Cimex lectulariu... [more]
UPI001E27656C1.480e-2587.0440S ribosomal protein S20-like n=3 Tax=Harmonia ax... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036838Ribosomal protein S10 domain superfamilyGENE3D3.30.70.600Ribosomal protein S10 domaincoord: 1..56
e-value: 9.6E-21
score: 75.9
IPR036838Ribosomal protein S10 domain superfamilySUPERFAMILY54999Ribosomal protein S10coord: 2..52
IPR027486Ribosomal protein S10 domainPFAMPF00338Ribosomal_S10coord: 2..51
e-value: 3.7E-10
score: 39.9
NoneNo IPR availablePANTHERPTHR11700:SF840S RIBOSOMAL PROTEIN S20coord: 2..53
IPR001848Ribosomal protein S10PANTHERPTHR1170030S RIBOSOMAL PROTEIN S10 FAMILY MEMBERcoord: 2..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig9contigH-akashiwo_Contig9:5653429..5654210 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig9.77.1mRNA_H-akashiwo_Contig9.77.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig9 5653260..5654820 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig9.77.1 ID=prot_H-akashiwo_Contig9.77.1|Name=mRNA_H-akashiwo_Contig9.77.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=58bp
MRKTPNGEGSKTWDRLQMRIHKRIIDLHSPSEIVKQITSISIEPGVDVEV
TLAENEA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036838Ribosomal_S10_dom_sf
IPR027486Ribosomal_S10_dom
IPR001848Ribosomal_S10