mRNA_H-akashiwo_Contig9.77.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig9.77.1 vs. uniprot
Match: A0A6V1LYK6_HETAK (Hypothetical protein n=2 Tax=Sar TaxID=2698737 RepID=A0A6V1LYK6_HETAK) HSP 1 Score: 224 bits (571), Expect = 4.380e-73 Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 1 Query: 1 LKAKTIESEESKIHRIRITLTSLNVQNLEKVCAELKRGAVDKKLRVSGPVRLPTKVLRHTMRKTPNGEGSKTWDRLQMRIHKRIIDLHSPSEIVKQITSISIEPGVDVEVTLAENEA 351 LKAKTIESEESKIHRIRITLTSLNVQNLEKVCAELKRGAVDKKLRVSGPVRLPTKVLRHTMRKTPNGEGSKTWDRLQMRIHKRIIDLHSPSEIVKQITSISIEPGVDVEVTLAENEA Sbjct: 4 LKAKTIESEESKIHRIRITLTSLNVQNLEKVCAELKRGAVDKKLRVSGPVRLPTKVLRHTMRKTPNGEGSKTWDRLQMRIHKRIIDLHSPSEIVKQITSISIEPGVDVEVTLAENEA 120
BLAST of mRNA_H-akashiwo_Contig9.77.1 vs. uniprot
Match: G4YYZ2_PHYSP (Ribosomal_S10 domain-containing protein n=7 Tax=Oomycota TaxID=4762 RepID=G4YYZ2_PHYSP) HSP 1 Score: 178 bits (452), Expect = 5.700e-55 Identity = 88/114 (77.19%), Postives = 106/114 (92.98%), Query Frame = 1 Query: 4 KAKTIESEESKIHRIRITLTSLNVQNLEKVCAELKRGAVDKKLRVSGPVRLPTKVLRHTMRKTPNGEGSKTWDRLQMRIHKRIIDLHSPSEIVKQITSISIEPGVDVEVTLAEN 345 K KT+E+EE++IHRIRITL+S NV+NLEKVCA+LKRGAVDK L+VSGPVRLPTK+LR T RK+P GEG+ TWDR +MRIHKRIIDLH+PS+IVKQITSISIEPGV+VEVT+A++ Sbjct: 6 KPKTVEAEETRIHRIRITLSSRNVKNLEKVCADLKRGAVDKNLKVSGPVRLPTKILRLTTRKSPCGEGTNTWDRFEMRIHKRIIDLHAPSDIVKQITSISIEPGVEVEVTIADS 119
BLAST of mRNA_H-akashiwo_Contig9.77.1 vs. uniprot
Match: H3GAS8_PHYRM (Ribosomal_S10 domain-containing protein n=9 Tax=Eukaryota TaxID=2759 RepID=H3GAS8_PHYRM) HSP 1 Score: 178 bits (452), Expect = 5.700e-55 Identity = 88/114 (77.19%), Postives = 106/114 (92.98%), Query Frame = 1 Query: 4 KAKTIESEESKIHRIRITLTSLNVQNLEKVCAELKRGAVDKKLRVSGPVRLPTKVLRHTMRKTPNGEGSKTWDRLQMRIHKRIIDLHSPSEIVKQITSISIEPGVDVEVTLAEN 345 K KT+E+EE++IHRIRITL+S NV+NLEKVCA+LKRGAVDK L+VSGPVRLPTK+LR T RK+P GEG+ TWDR +MRIHKRIIDLH+PS+IVKQITSISIEPGV+VEVT+A++ Sbjct: 6 KQKTVEAEETRIHRIRITLSSRNVKNLEKVCADLKRGAVDKNLKVSGPVRLPTKILRLTTRKSPCGEGTNTWDRFEMRIHKRIIDLHAPSDIVKQITSISIEPGVEVEVTIADS 119
BLAST of mRNA_H-akashiwo_Contig9.77.1 vs. uniprot
Match: A0A329RI77_9STRA (Ribosomal_S10 domain-containing protein n=11 Tax=Phytophthora TaxID=4783 RepID=A0A329RI77_9STRA) HSP 1 Score: 180 bits (456), Expect = 6.110e-55 Identity = 89/114 (78.07%), Postives = 106/114 (92.98%), Query Frame = 1 Query: 4 KAKTIESEESKIHRIRITLTSLNVQNLEKVCAELKRGAVDKKLRVSGPVRLPTKVLRHTMRKTPNGEGSKTWDRLQMRIHKRIIDLHSPSEIVKQITSISIEPGVDVEVTLAEN 345 K KT+E+EE++IHRIRITLTS NV+NLEKVCA+LKRGAVDK L+VSGPVRLPTK+LR T RK+P GEG+ TWDR +MRIHKRIIDLH+PS+IVKQITSISIEPGV+VEVT+A++ Sbjct: 52 KPKTVEAEETRIHRIRITLTSRNVKNLEKVCADLKRGAVDKNLKVSGPVRLPTKILRLTTRKSPCGEGTNTWDRFEMRIHKRIIDLHAPSDIVKQITSISIEPGVEVEVTIADS 165
BLAST of mRNA_H-akashiwo_Contig9.77.1 vs. uniprot
Match: A0A421F2P5_9STRA (Ribosomal_S10 domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421F2P5_9STRA) HSP 1 Score: 177 bits (449), Expect = 4.380e-54 Identity = 87/114 (76.32%), Postives = 106/114 (92.98%), Query Frame = 1 Query: 4 KAKTIESEESKIHRIRITLTSLNVQNLEKVCAELKRGAVDKKLRVSGPVRLPTKVLRHTMRKTPNGEGSKTWDRLQMRIHKRIIDLHSPSEIVKQITSISIEPGVDVEVTLAEN 345 K KT+E+EE++IHRIRITL+S NV+NLEKVCA+LKRGAVDK L+V+GPVRLPTK+LR T RK+P GEG+ TWDR +MRIHKRIIDLH+PS+IVKQITSISIEPGV+VEVT+A++ Sbjct: 37 KPKTVEAEETRIHRIRITLSSRNVKNLEKVCADLKRGAVDKNLKVAGPVRLPTKILRLTTRKSPCGEGTNTWDRFEMRIHKRIIDLHAPSDIVKQITSISIEPGVEVEVTIADS 150
BLAST of mRNA_H-akashiwo_Contig9.77.1 vs. uniprot
Match: A0A397FH44_9STRA (Ribosomal_S10 domain-containing protein n=8 Tax=Saprolegniaceae TaxID=4764 RepID=A0A397FH44_9STRA) HSP 1 Score: 176 bits (446), Expect = 8.810e-54 Identity = 88/109 (80.73%), Postives = 101/109 (92.66%), Query Frame = 1 Query: 19 ESEESKIHRIRITLTSLNVQNLEKVCAELKRGAVDKKLRVSGPVRLPTKVLRHTMRKTPNGEGSKTWDRLQMRIHKRIIDLHSPSEIVKQITSISIEPGVDVEVTLAEN 345 E EES+IHRIRITLTS NV+NLEKVCA+LK+GAVDK L+VSGPVRLPTK+LR T RK+P GEG+ TWDR +MRIHKRIIDLHSPSEIVKQITSISIEPGV+VEVT+A++ Sbjct: 31 EGEESRIHRIRITLTSRNVKNLEKVCADLKKGAVDKNLKVSGPVRLPTKILRLTTRKSPCGEGTNTWDRFEMRIHKRIIDLHSPSEIVKQITSISIEPGVEVEVTIADS 139
BLAST of mRNA_H-akashiwo_Contig9.77.1 vs. uniprot
Match: UPI0014259BF5 (40S ribosomal protein S20 n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI0014259BF5) HSP 1 Score: 171 bits (433), Expect = 4.280e-52 Identity = 85/107 (79.44%), Postives = 97/107 (90.65%), Query Frame = 1 Query: 22 SEESKIHRIRITLTSLNVQNLEKVCAELKRGAVDKKLRVSGPVRLPTKVLRHTMRKTPNGEGSKTWDRLQMRIHKRIIDLHSPSEIVKQITSISIEPGVDVEVTLAE 342 +E+ +HRIRITLTS NV+NLEKVCAELKRGA DK L+V GP+R+PTK+LR T RKTP GEGSKTWDR QMRIHKR+IDLHSPSEIVKQITSISIEPGV+VEVT+A+ Sbjct: 12 AEDVTVHRIRITLTSRNVKNLEKVCAELKRGAQDKNLQVKGPIRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIAD 118
BLAST of mRNA_H-akashiwo_Contig9.77.1 vs. uniprot
Match: A0A1Y1XN71_9FUNG (40S ribosomal protein S20-like protein n=3 Tax=Zoopagomycota TaxID=1913638 RepID=A0A1Y1XN71_9FUNG) HSP 1 Score: 170 bits (431), Expect = 9.180e-52 Identity = 87/108 (80.56%), Postives = 97/108 (89.81%), Query Frame = 1 Query: 19 ESEESKIHRIRITLTSLNVQNLEKVCAELKRGAVDKKLRVSGPVRLPTKVLRHTMRKTPNGEGSKTWDRLQMRIHKRIIDLHSPSEIVKQITSISIEPGVDVEVTLAE 342 E E+KIH+IRITLTS NV+NLEKVCA+L A DK+LRV GPVRLPTKVLR T RKTPNGEGSKTWDR +MRIHKR+IDLHSPSEIVKQITSISIEPGV+VEVT+A+ Sbjct: 13 EQVEAKIHKIRITLTSRNVKNLEKVCADLVSRAKDKQLRVKGPVRLPTKVLRITTRKTPNGEGSKTWDRFEMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIAD 120
BLAST of mRNA_H-akashiwo_Contig9.77.1 vs. uniprot
Match: A0A7S1ZI10_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZI10_TRICV) HSP 1 Score: 170 bits (431), Expect = 9.180e-52 Identity = 90/113 (79.65%), Postives = 100/113 (88.50%), Query Frame = 1 Query: 1 LKAKTIESEESKIHRIRITLTSLNVQNLEKVCAELKRGAVDKKLRVSGPVRLPTKVLRHTMRKTPNGEGSKTWDRLQMRIHKRIIDLHSPSEIVKQITSISIEPGVDVEVTLA 339 LKAK E EE+KIHRIRITLTS NV+NLEKVCA+L RGA DKKL+V GPVRLPTKVLR T RK+P GEG+ TWDR +MRIHKR+IDLHSPSE VKQITSISIEPGV+VEVT+A Sbjct: 10 LKAKAFE-EEAKIHRIRITLTSRNVRNLEKVCADLIRGAKDKKLKVKGPVRLPTKVLRITTRKSPCGEGTNTWDRFEMRIHKRLIDLHSPSETVKQITSISIEPGVEVEVTIA 121
BLAST of mRNA_H-akashiwo_Contig9.77.1 vs. uniprot
Match: A0A5N5SPA9_9CRUS (40S ribosomal protein S20 n=1 Tax=Armadillidium nasatum TaxID=96803 RepID=A0A5N5SPA9_9CRUS) HSP 1 Score: 170 bits (430), Expect = 1.220e-51 Identity = 86/106 (81.13%), Postives = 96/106 (90.57%), Query Frame = 1 Query: 25 EESKIHRIRITLTSLNVQNLEKVCAELKRGAVDKKLRVSGPVRLPTKVLRHTMRKTPNGEGSKTWDRLQMRIHKRIIDLHSPSEIVKQITSISIEPGVDVEVTLAE 342 EESKIHRIRITLTS NV++LEKVC EL +GA ++KL+V GPVRLPTK+LR T RKTP GEGSKTWDR QMRIHKR+IDLHSPSE+VKQITSISIEP VDVEVT+AE Sbjct: 14 EESKIHRIRITLTSSNVKSLEKVCTELVKGAKEEKLKVKGPVRLPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEVVKQITSISIEPDVDVEVTIAE 119 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig9.77.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig9.77.1 >prot_H-akashiwo_Contig9.77.1 ID=prot_H-akashiwo_Contig9.77.1|Name=mRNA_H-akashiwo_Contig9.77.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=58bp MRKTPNGEGSKTWDRLQMRIHKRIIDLHSPSEIVKQITSISIEPGVDVEVback to top mRNA from alignment at H-akashiwo_Contig9:5653260..5654820- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig9.77.1 ID=mRNA_H-akashiwo_Contig9.77.1|Name=mRNA_H-akashiwo_Contig9.77.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1561bp|location=Sequence derived from alignment at H-akashiwo_Contig9:5653260..5654820- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig9:5653260..5654820- >mRNA_H-akashiwo_Contig9.77.1 ID=mRNA_H-akashiwo_Contig9.77.1|Name=mRNA_H-akashiwo_Contig9.77.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=174bp|location=Sequence derived from alignment at H-akashiwo_Contig9:5653260..5654820- (Heterosigma akashiwo CCMP452)back to top |