prot_H-akashiwo_Contig80.43.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig80.43.1
Unique Nameprot_H-akashiwo_Contig80.43.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length179
Homology
BLAST of mRNA_H-akashiwo_Contig80.43.1 vs. uniprot
Match: A0A7S3Y0N9_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y0N9_HETAK)

HSP 1 Score: 341 bits (875), Expect = 1.550e-113
Identity = 169/179 (94.41%), Postives = 172/179 (96.09%), Query Frame = 0
Query:    1 MQGGSRMTPLVAQVVDKAREGISFVYIPAHQGHAGNEKADELAKAAVEEGVRVEVQVPRGYTKGLARERTWRMWAAEWEAMRAEDEAKGEGVRRRTYLEFAPTLEDLKAGVWDKKVDARVLQLVSGHCNLWEYLHRFERREMPECALCGVEAGTVAHYYLLRCRRWDRERNEIMGLVKR 179
            MQGGSRMTPLVAQVVDKAREGISFVYIPAH+GHAGNEKADELAKAAVEEGVRVEVQVPRGYTKGLARERTWR+WAAEWEAMRAEDEAKGEG RRRTYLEFAP+LEDLKAGVWDKKVDARVLQLVSGHCNL EYLHRF RRE PECALCGVEA TVAHY LLRCRRWDRERNEIM LVKR
Sbjct:  311 MQGGSRMTPLVAQVVDKAREGISFVYIPAHKGHAGNEKADELAKAAVEEGVRVEVQVPRGYTKGLARERTWRLWAAEWEAMRAEDEAKGEGERRRTYLEFAPSLEDLKAGVWDKKVDARVLQLVSGHCNLGEYLHRFGRRETPECALCGVEAETVAHY-LLRCRRWDRERNEIMDLVKR 488          
BLAST of mRNA_H-akashiwo_Contig80.43.1 vs. uniprot
Match: A0A7S4DA11_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DA11_HETAK)

HSP 1 Score: 229 bits (584), Expect = 8.020e-73
Identity = 113/116 (97.41%), Postives = 115/116 (99.14%), Query Frame = 0
Query:    1 MQGGSRMTPLVAQVVDKAREGISFVYIPAHQGHAGNEKADELAKAAVEEGVRVEVQVPRGYTKGLARERTWRMWAAEWEAMRAEDEAKGEGVRRRTYLEFAPTLEDLKAGVWDKKV 116
            MQGGSRMTPLVAQVVDKAREGISFVYIPAH+GHAGNEKADELAKAAVEEGVRVEVQVPRGYTKGLARERTWR+WAAEWEAMRAEDEAKGEG RRRTYLEFAPTLEDLKAGVWDKKV
Sbjct:  157 MQGGSRMTPLVAQVVDKAREGISFVYIPAHKGHAGNEKADELAKAAVEEGVRVEVQVPRGYTKGLARERTWRLWAAEWEAMRAEDEAKGEGERRRTYLEFAPTLEDLKAGVWDKKV 272          
BLAST of mRNA_H-akashiwo_Contig80.43.1 vs. uniprot
Match: A0A7S4DD44_HETAK (Hypothetical protein n=4 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DD44_HETAK)

HSP 1 Score: 216 bits (551), Expect = 3.160e-62
Identity = 109/179 (60.89%), Postives = 131/179 (73.18%), Query Frame = 0
Query:    1 MQGGSRMTPLVAQVVDKAREGISFVYIPAHQGHAGNEKADELAKAAVEEGVRVEVQVPRGYTKGLARERTWRMWAAEWEAMRAEDEAKGEGVRR-RTYLEFAPTLEDLKAGVW-DKKVDARVLQLVSGHCNLWEYLHRFERREMPECALCGVEAGTVAHYYLLRCRRWDRERNEIMGLV 177
            + G SRMT LVA++ D AR G SF+YIP H+GHAGNEKADELAK AVE G  V+V VPR +T+ LARERTWR WA EW A+RA +E  G+     + Y +FAP L DLKA VW + KVD+ VLQL+SGHCNL  YLHRF RR+ PEC  CG +  +V H+ LL C+RWDRERNEI  L+
Sbjct:  776 VSGQSRMTTLVAEIADGARAGDSFLYIPGHKGHAGNEKADELAKLAVEMGEEVQVPVPRAHTRQLARERTWRRWAEEWSALRALEEDGGQAQGGGKAYFKFAPGLGDLKANVWGNDKVDSSVLQLLSGHCNLGAYLHRFGRRDTPECTFCGKDEESVGHF-LLECKRWDRERNEISDLI 953          
BLAST of mRNA_H-akashiwo_Contig80.43.1 vs. uniprot
Match: A0A7S3Y0N7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y0N7_HETAK)

HSP 1 Score: 168 bits (425), Expect = 2.450e-47
Identity = 84/91 (92.31%), Postives = 88/91 (96.70%), Query Frame = 0
Query:    1 MQGGSRMTPLVAQVVDKAREGISFVYIPAHQGHAGNEKADELAKAAVEEGVRVEVQVPRGYTKGLARERTWRMWAAEWEAMRAEDEAKGEG 91
            MQGGSRMTPLVAQVVDKAREGISFVYIPAH+GHAGNEKADELAKAAVEEGVRVEVQVPRGYTKGLARERTWR+W AE EAM AEDEA+G+G
Sbjct:  311 MQGGSRMTPLVAQVVDKAREGISFVYIPAHKGHAGNEKADELAKAAVEEGVRVEVQVPRGYTKGLARERTWRLWVAELEAMGAEDEARGKG 401          
BLAST of mRNA_H-akashiwo_Contig80.43.1 vs. uniprot
Match: A0A7S3Y8S2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8S2_HETAK)

HSP 1 Score: 166 bits (419), Expect = 9.240e-45
Identity = 86/182 (47.25%), Postives = 110/182 (60.44%), Query Frame = 0
Query:    1 MQGGSRMTPLVAQVVDKAREGISFVYIPAHQGHAGNEKADELAKAAVEEGVRVEVQVPRGYTKGLARERTWRMWAAEWEAMRAEDEAKGEGV---RRRTYLEFAPTLEDLKAGVWD--KKVDARVLQLVSGHCNLWEYLHRFERREMPECALCGVEAGTVAHYYLLRCRRWDRERNEIMGLV 177
            ++ G RMT LV+++  +  +  SFVYIP HQGH GNE AD+LAK A   G+ VEV VPR +T+ LA+ERTW +WA EW      D   G G+     + YL FAPTLED+K  VW   K    RVLQL+SGHCNL  YLH   +R+  +C  CG        +YLL C RW  +R E+  L+
Sbjct:  454 LKSGRRMTRLVSEIAQEVEDRHSFVYIPGHQGHEGNEVADQLAKEAANAGIEVEVDVPRAFTRRLAKERTWGVWAQEWR-----DLEHGSGMDMGEDKAYLRFAPTLEDIKEAVWKGGKAGGHRVLQLLSGHCNLAGYLHSRGKRDGAQCDNCGRGEKEDVEHYLLHCPRWGAQRQEMSDLI 630          
BLAST of mRNA_H-akashiwo_Contig80.43.1 vs. uniprot
Match: A0A7S4DAH4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DAH4_HETAK)

HSP 1 Score: 135 bits (339), Expect = 1.440e-36
Identity = 73/161 (45.34%), Postives = 92/161 (57.14%), Query Frame = 0
Query:    6 RMTPLVAQVVDKAREGISFVYIPAHQGHAGNEKADELAKAAVEEGVRVEVQVPRGYTKGLARERTWRMWAAEWEAMRAEDEAKGEGVRRRTYLEFAPTLEDLKAGVWDKKVDARVLQLVSGHCNLWEYLHRFERREMPECALCGVEAGTVAHYYLLRCRRW 166
            R+TP+ A+VV  A +  S VY+P HQG   NE+AD  A  AV  G+   V VPR +T+ LA +  W  W  EW    + D           Y  FAP+LE L+A VWDK +  RVLQL+SGHC L  YLHRF   E  +C  C  E  TV  +YLL+C+RW
Sbjct:   10 RLTPITAEVVRLAGDYHSLVYVPEHQGIPRNEEADRPANLAVTNGIYTPVDVPRAHTRRLAGDYFWGEWEREWGNAGSADPPP-------VYKRFAPSLEALRANVWDKGMGVRVLQLLSGHCILGSYLHRFHLEETAKCEWCN-EDETVEQHYLLQCQRW 162          
BLAST of mRNA_H-akashiwo_Contig80.43.1 vs. uniprot
Match: A0A7S4DA35_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DA35_HETAK)

HSP 1 Score: 129 bits (325), Expect = 1.060e-34
Identity = 71/160 (44.38%), Postives = 92/160 (57.50%), Query Frame = 0
Query:    6 RMTPLVAQVVDKAREGISFVYIPAHQGHAGNEKADELAKAAVEEGVRVEVQVPRGYTKGLARERTWRMWAAEWEAMRAEDEAKGEGVRRRTYLEFAPTLEDLKAGVWDKKVDARVLQLVSGHCNLWEYLHRFERREMPECALCGVEAGTVAHYYLLRCRR 165
            R+TP+ A+VV  A +  S VY+PAH+G  GNE+AD LA  AV  G    V VPR +T+ LA +  W  W  EW    + D           Y  FAP+LE L+A VWDK +  RVLQL+SGHC+L  +LHRF   E  +   C  + G    +YLLRC+R
Sbjct:   34 RLTPITAEVVRLAGDCHSLVYVPAHKGIPGNEEADRLANLAVTNGTYALVDVPRAHTRRLAGDYFWGEWEREWGNAGSADPPP-------VYKRFAPSLEALRANVWDKGMGVRVLQLLSGHCSLGSFLHRFHLEETAKYEWC--DEGEAVGHYLLRCQR 184          
BLAST of mRNA_H-akashiwo_Contig80.43.1 vs. uniprot
Match: A0A7S4DA87_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DA87_HETAK)

HSP 1 Score: 120 bits (301), Expect = 9.920e-31
Identity = 68/161 (42.24%), Postives = 85/161 (52.80%), Query Frame = 0
Query:    6 RMTPLVAQVVDKAREGISFVYIPAHQGHAGNEKADELAKAAVEEGVRVEVQVPRGYTKGLARERTWRMWAAEWEAMRAEDEAKGEGVRRRTYLEFAPTLEDLKAGVWDKKVDARVLQLVSGHCNLWEYLHRFERREMPEC-----------ALCGVEAGTV 155
            R+TP+ A+VV  A +  S VY+PAH+G  GNE+AD LA  AV  G    V VPR +T+ LA +  W  W  EW    + D           Y  FAP+LE L+A VWDK +  +VLQL+SGHCNL  YLH     E  +C             CGV  G V
Sbjct:   34 RLTPITAEVVRLAGDCHSLVYVPAHKGIPGNEEADRLANLAVTNGTYALVDVPRAHTRRLAGDYFWGEWEREWGNAGSADPPP-------VYKRFAPSLEALRANVWDKGLGVQVLQLLSGHCNLGSYLHSSHLEETAQCEWCDATRLWSTTCCGVRGGLV 187          
BLAST of mRNA_H-akashiwo_Contig80.43.1 vs. uniprot
Match: A0A7S3Y0X2_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y0X2_HETAK)

HSP 1 Score: 119 bits (299), Expect = 6.310e-30
Identity = 64/145 (44.14%), Postives = 81/145 (55.86%), Query Frame = 0
Query:    6 RMTPLVAQVVDKAREGISFVYIPAHQGHAGNEKADELAKAAVEEGVRVEVQVPRGYTKGLARERTWRMWAAEWEAMRAEDEAKGEGVRRRTYLEFAPTLEDLKAGVWDKKVDARVLQLVSGHCNLWEYLHRFERREMPECALCGV 150
            R+TP+ A+VV  A +  S VY+PAH+G  GNE+AD LA  AV  G    V VPR +T+ LA +  W  W  EW    + D           Y  FAP+LE L+A VWDK +  +VLQL+SGHCNL  YLH     E  +C  C  
Sbjct:   34 RLTPITAEVVRLAGDCHSLVYVPAHKGIPGNEEADRLANLAVTNGTYALVDVPRAHTRRLAGDYFWGEWEREWGNAGSADPPP-------VYKRFAPSLEALRANVWDKGLGVQVLQLLSGHCNLGSYLHSSHLEETAQCEWCDA 171          
BLAST of mRNA_H-akashiwo_Contig80.43.1 vs. uniprot
Match: A0A7S3XTN3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XTN3_HETAK)

HSP 1 Score: 105 bits (261), Expect = 1.210e-25
Identity = 61/127 (48.03%), Postives = 77/127 (60.63%), Query Frame = 0
Query:    4 GSRMTPLVAQVVDKAREGISFVYIPAHQGHAGNEKADELAKAAVEEGVRVEVQVPRGYTKGLARERTWRMWAAEWEAMRAEDEAKGEGV---RRRTYLEFAPTLEDLKAGVWD--KKVDARVLQLVS 125
            G  MT LV+++  +A     FVYI  +QGH GNE  D+LAKAA  EGV VEV V R +T+ LA+E+TWR+WA EW      D   G G+     + YL+FAPTLE +K   W   K    RVLQL+S
Sbjct:   22 GRGMTHLVSEIAQEAEGRHLFVYILGNQGHKGNEMTDQLAKAAATEGVEVEVDVLRAFTRRLAKEQTWRVWAQEWR-----DLEHGPGLDMGEEKDYLQFAPTLEGIKEAAWKGGKAGGHRVLQLLS 143          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig80.43.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3Y0N9_HETAK1.550e-11394.41Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A7S4DA11_HETAK8.020e-7397.41Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A7S4DD44_HETAK3.160e-6260.89Hypothetical protein n=4 Tax=Heterosigma akashiwo ... [more]
A0A7S3Y0N7_HETAK2.450e-4792.31Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S3Y8S2_HETAK9.240e-4547.25Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S4DAH4_HETAK1.440e-3645.34Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S4DA35_HETAK1.060e-3444.38Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A7S4DA87_HETAK9.920e-3142.24Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S3Y0X2_HETAK6.310e-3044.14Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S3XTN3_HETAK1.210e-2548.03Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002156Ribonuclease H domainPFAMPF00075RNase_Hcoord: 18..47
e-value: 4.1E-6
score: 27.0
IPR002156Ribonuclease H domainPROSITEPS50879RNASE_Hcoord: 1..48
score: 12.063582
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 4..53
e-value: 3.8E-8
score: 35.4
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 19..49

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig80contigH-akashiwo_Contig80:1872409..1872945 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig80.43.1mRNA_H-akashiwo_Contig80.43.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig80 1871755..1872945 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig80.43.1 ID=prot_H-akashiwo_Contig80.43.1|Name=mRNA_H-akashiwo_Contig80.43.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=179bp
MQGGSRMTPLVAQVVDKAREGISFVYIPAHQGHAGNEKADELAKAAVEEG
VRVEVQVPRGYTKGLARERTWRMWAAEWEAMRAEDEAKGEGVRRRTYLEF
APTLEDLKAGVWDKKVDARVLQLVSGHCNLWEYLHRFERREMPECALCGV
EAGTVAHYYLLRCRRWDRERNEIMGLVKR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002156RNaseH_domain
IPR036397RNaseH_sf
IPR012337RNaseH-like_sf