mRNA_H-akashiwo_Contig80.43.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig80.43.1 vs. uniprot
Match: A0A7S3Y0N9_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y0N9_HETAK) HSP 1 Score: 667 bits (1721), Expect = 3.980e-238 Identity = 331/349 (94.84%), Postives = 337/349 (96.56%), Query Frame = 1 Query: 145 SKTTVILQYCHGTLRGDQEALQGDCRWSKRFTYVKGVLQDAGIVLGDVEYERRLHDFELPYPPYRKVLDISLGSREGWAEDRLTGLDAETGVIFTDGSKIPGQGVGAAFVAMDKGGVVQASGKFKLPDFSTNYQA*AVGMREGLE*VEEDEGRKAGKWVVATDGLAVLSAMQGGSRMTPLVAQVVDKAREGISFVYIPAHQGHAGNEKADELAKAAVEEGVRVEVQVPRGYTKGLARERTWRMWAAEWEAMRAEDEAKGEGVRRRTYLEFAPTLEDLKAGVWDKKVDARVLQLVSGHCNLWEYLHRFERREMPECALCGVEAGTVAHYYLLRCRRWDRERNEIMGLVKR 1191 ++ VILQYCHGTLRGDQEALQGDC+WSKRFTYVKGVLQDAGIVLGDVEYERRLHDFELPYPPYRKVLDISLGSREGWAEDRLTGLDAETGVIFTDGSKIPGQGVGAAFVAMDK GVVQASGKFKLPDFSTNYQA AVGMREGLE VEEDEGRKAGKWVVATDGLAVLSAMQGGSRMTPLVAQVVDKAREGISFVYIPAH+GHAGNEKADELAKAAVEEGVRVEVQVPRGYTKGLARERTWR+WAAEWEAMRAEDEAKGEG RRRTYLEFAP+LEDLKAGVWDKKVDARVLQLVSGHCNL EYLHRF RRE PECALCGVEA TVAHY LLRCRRWDRERNEIM LVKR Sbjct: 141 AQEAVILQYCHGTLRGDQEALQGDCKWSKRFTYVKGVLQDAGIVLGDVEYERRLHDFELPYPPYRKVLDISLGSREGWAEDRLTGLDAETGVIFTDGSKIPGQGVGAAFVAMDKDGVVQASGKFKLPDFSTNYQAEAVGMREGLEWVEEDEGRKAGKWVVATDGLAVLSAMQGGSRMTPLVAQVVDKAREGISFVYIPAHKGHAGNEKADELAKAAVEEGVRVEVQVPRGYTKGLARERTWRLWAAEWEAMRAEDEAKGEGERRRTYLEFAPSLEDLKAGVWDKKVDARVLQLVSGHCNLGEYLHRFGRRETPECALCGVEAETVAHY-LLRCRRWDRERNEIMDLVKR 488
BLAST of mRNA_H-akashiwo_Contig80.43.1 vs. uniprot
Match: A0A7S4DA11_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DA11_HETAK) HSP 1 Score: 515 bits (1327), Expect = 3.820e-182 Identity = 257/272 (94.49%), Postives = 262/272 (96.32%), Query Frame = 1 Query: 187 RGDQEALQGDCRWSKRFTYVKGVLQDAGIVLGDVEYERRLHDFELPYPPYRKVLDISLGSREGWAEDRLTGLDAETGVIFTDGSKIPGQGVGAAFVAMDKGGVVQASGKFKLPDFSTNYQA*AVGMREGLE*VEEDEGRKAGKWVVATDGLAVLSAMQGGSRMTPLVAQVVDKAREGISFVYIPAHQGHAGNEKADELAKAAVEEGVRVEVQVPRGYTKGLARERTWRMWAAEWEAMRAEDEAKGEGVRRRTYLEFAPTLEDLKAGVWDKKV 1002 RGDQ+ALQG CRW KRFTYV VL+D G+VLG VEYERRLHDFELPYPPYRKVLDISLGSREGWAEDRLTGLDAETGVIFTDGSKIPGQGVGAAFVAMDK GVVQASGKFKLPDFSTNYQA AVGMREGLE VEEDEGRKAGKWVVATDGLAVLSAMQGGSRMTPLVAQVVDKAREGISFVYIPAH+GHAGNEKADELAKAAVEEGVRVEVQVPRGYTKGLARERTWR+WAAEWEAMRAEDEAKGEG RRRTYLEFAPTLEDLKAGVWDKKV Sbjct: 1 RGDQKALQGGCRWRKRFTYVNRVLEDKGVVLGCVEYERRLHDFELPYPPYRKVLDISLGSREGWAEDRLTGLDAETGVIFTDGSKIPGQGVGAAFVAMDKDGVVQASGKFKLPDFSTNYQAEAVGMREGLEWVEEDEGRKAGKWVVATDGLAVLSAMQGGSRMTPLVAQVVDKAREGISFVYIPAHKGHAGNEKADELAKAAVEEGVRVEVQVPRGYTKGLARERTWRLWAAEWEAMRAEDEAKGEGERRRTYLEFAPTLEDLKAGVWDKKV 272
BLAST of mRNA_H-akashiwo_Contig80.43.1 vs. uniprot
Match: A0A7S3Y0N7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y0N7_HETAK) HSP 1 Score: 494 bits (1271), Expect = 1.640e-171 Identity = 246/261 (94.25%), Postives = 253/261 (96.93%), Query Frame = 1 Query: 145 SKTTVILQYCHGTLRGDQEALQGDCRWSKRFTYVKGVLQDAGIVLGDVEYERRLHDFELPYPPYRKVLDISLGSREGWAEDRLTGLDAETGVIFTDGSKIPGQGVGAAFVAMDKGGVVQASGKFKLPDFSTNYQA*AVGMREGLE*VEEDEGRKAGKWVVATDGLAVLSAMQGGSRMTPLVAQVVDKAREGISFVYIPAHQGHAGNEKADELAKAAVEEGVRVEVQVPRGYTKGLARERTWRMWAAEWEAMRAEDEAKGEG 927 ++ VILQYCHGTLRGDQEALQGDC+WSKRFTYVKGVLQDAGIVLGDVEYERRLHDFELPYPPYRKVLDISLGSREGWAEDRLTGLDAETGVIFTDGSKIPGQGVGAAFVAMDK GVVQASGKFKLPDFSTNYQA AVGMREGLE VEEDEGRKAGKWVVATDGLAVLSAMQGGSRMTPLVAQVVDKAREGISFVYIPAH+GHAGNEKADELAKAAVEEGVRVEVQVPRGYTKGLARERTWR+W AE EAM AEDEA+G+G Sbjct: 141 AQEAVILQYCHGTLRGDQEALQGDCKWSKRFTYVKGVLQDAGIVLGDVEYERRLHDFELPYPPYRKVLDISLGSREGWAEDRLTGLDAETGVIFTDGSKIPGQGVGAAFVAMDKDGVVQASGKFKLPDFSTNYQAEAVGMREGLEWVEEDEGRKAGKWVVATDGLAVLSAMQGGSRMTPLVAQVVDKAREGISFVYIPAHKGHAGNEKADELAKAAVEEGVRVEVQVPRGYTKGLARERTWRLWVAELEAMGAEDEARGKG 401
BLAST of mRNA_H-akashiwo_Contig80.43.1 vs. uniprot
Match: A0A7S4DD44_HETAK (Hypothetical protein n=4 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DD44_HETAK) HSP 1 Score: 399 bits (1025), Expect = 3.780e-127 Identity = 206/346 (59.54%), Postives = 253/346 (73.12%), Query Frame = 1 Query: 157 VILQYCHGTLRGDQEALQGDCRWSKRFTYVKGVLQDAGIVLGDVEYERRLHDFELPYPPYRKVLDISLGSREGWAEDRLTGLDAETG-VIFTDGSKIPGQGVGAAFVAMDKGGVVQASGKFKLPDFSTNYQA*AVGMREGLE*VEEDEGRKAGKWVVATDGLAVLSAMQGGSRMTPLVAQVVDKAREGISFVYIPAHQGHAGNEKADELAKAAVEEGVRVEVQVPRGYTKGLARERTWRMWAAEWEAMRAEDEAKGEGVRR-RTYLEFAPTLEDLKAGVW-DKKVDARVLQLVSGHCNLWEYLHRFERREMPECALCGVEAGTVAHYYLLRCRRWDRERNEIMGLV 1185 ++ QYCHGTLR DQEAL+GDC WS RFT+VK VL DAG+ L +++ERR+ D E PYPP R+ D++LGSRE WAED + + G VIFTDGSKIP +GVGAA+VAM GG V+ASG FKLPD+ T YQA AV +RE + VE E R+ ++A+D AVLS++ G SRMT LVA++ D AR G SF+YIP H+GHAGNEKADELAK AVE G V+V VPR +T+ LARERTWR WA EW A+RA +E G+ + Y +FAP L DLKA VW + KVD+ VLQL+SGHCNL YLHRF RR+ PEC CG + +V H+ LL C+RWDRERNEI L+ Sbjct: 613 LVQQYCHGTLRRDQEALKGDCEWSPRFTFVKAVLDDAGVRLDGMDFERRVLDHERPYPPERRTPDVTLGSREEWAEDMIEDVWRAGGRVIFTDGSKIPEKGVGAAYVAMGPGGEVEASGLFKLPDYCTVYQAEAVALRESQKRVESREERR----LMASDSRAVLSSVSGQSRMTTLVAEIADGARAGDSFLYIPGHKGHAGNEKADELAKLAVEMGEEVQVPVPRAHTRQLARERTWRRWAEEWSALRALEEDGGQAQGGGKAYFKFAPGLGDLKANVWGNDKVDSSVLQLLSGHCNLGAYLHRFGRRDTPECTFCGKDEESVGHF-LLECKRWDRERNEISDLI 953
BLAST of mRNA_H-akashiwo_Contig80.43.1 vs. uniprot
Match: A0A7S3Y8S2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8S2_HETAK) HSP 1 Score: 296 bits (758), Expect = 6.970e-91 Identity = 162/351 (46.15%), Postives = 213/351 (60.68%), Query Frame = 1 Query: 148 KTTVILQYCHGTLRGDQEALQGDCRWSKRFTYVKGVLQDAGIVLGDVEYERRLHDFELPYPPYRKVLDISLGSREGWAEDRLTGLDAETGVIFTDGSKIPGQGVGAAFVAMDKGGVVQASGKFKLPDFSTNYQA*AVGMREGLE*VEEDEGRKAGKWVVATDGLAVLSAMQGGSRMTPLVAQVVDKAREGISFVYIPAHQGHAGNEKADELAKAAVEEGVRVEVQVPRGYTKGLARERTWRMWAAEWEAMRAEDEAKGEGV---RRRTYLEFAPTLEDLKAGVWD--KKVDARVLQLVSGHCNLWEYLHRFERREMPECALCGVEAGTVAHYYLLRCRRWDRERNEIMGLV 1185 K V+LQY HG +R EAL+ C WS +V+ L++AG+ L +ER + D ELPYPP R + ++LGSR+ WAE+ L G A G IFTDGSK+ VGAAFVA ++ G G ++LP + T YQA + RE +E GR G+W+VA+D LAVL+ ++ G RMT LV+++ + + SFVYIP HQGH GNE AD+LAK A G+ VEV VPR +T+ LA+ERTW +WA EW D G G+ + YL FAPTLED+K VW K RVLQL+SGHCNL YLH +R+ +C CG +YLL C RW +R E+ L+ Sbjct: 290 KEVVVLQYTHGIMRRRVEALREGCEWSPHLRFVRETLEEAGVDLQGT-FERIMLDHELPYPPLRTAVKVTLGSRDAWAEELLEG--ARGGRIFTDGSKLEDGSVGAAFVAFNRRGREVGRGLYRLPHYCTVYQAEGLAQRESARWTKEP-GR-GGEWMVASDSLAVLACLKSGRRMTRLVSEIAQEVEDRHSFVYIPGHQGHEGNEVADQLAKEAANAGIEVEVDVPRAFTRRLAKERTWGVWAQEWR-----DLEHGSGMDMGEDKAYLRFAPTLEDIKEAVWKGGKAGGHRVLQLLSGHCNLAGYLHSRGKRDGAQCDNCGRGEKEDVEHYLLHCPRWGAQRQEMSDLI 630
BLAST of mRNA_H-akashiwo_Contig80.43.1 vs. uniprot
Match: A0A7S3Y0P0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y0P0_HETAK) HSP 1 Score: 220 bits (560), Expect = 5.160e-68 Identity = 107/127 (84.25%), Postives = 114/127 (89.76%), Query Frame = 1 Query: 187 RGDQEALQGDCRWSKRFTYVKGVLQDAGIVLGDVEYERRLHDFELPYPPYRKVLDISLGSREGWAEDRLTGLDAETGVIFTDGSKIPGQGVGAAFVAMDKGGVVQASGKFKLPDFSTNYQA*AVGMR 567 RGDQ+ALQG CRW KRFTYV VL+D G+VLG VEYERRLHDFELPYPPYRKVLDISLGSREGWAEDRLTGLDAETGVIFTDGSKIPGQGVGAAFVAMDK G VQAS +F+LP+FS NYQ AV +R Sbjct: 1 RGDQKALQGGCRWRKRFTYVNRVLEDKGVVLGCVEYERRLHDFELPYPPYRKVLDISLGSREGWAEDRLTGLDAETGVIFTDGSKIPGQGVGAAFVAMDKDGGVQASREFQLPEFSMNYQVEAVAIR 127
BLAST of mRNA_H-akashiwo_Contig80.43.1 vs. uniprot
Match: A0A7S3XUZ3_HETAK (Hypothetical protein (Fragment) n=4 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XUZ3_HETAK) HSP 1 Score: 214 bits (544), Expect = 2.350e-63 Identity = 117/223 (52.47%), Postives = 147/223 (65.92%), Query Frame = 1 Query: 145 SKTTVILQYCHGTLRGDQEALQGDCRWSKRFTYVKGVLQDAGIVLGDVEYERRLHDFELPYPPYRKVLDISLGSREGWAEDRLTGLDAETGVIFTDGSKIPGQGVGAAFVAMDKGGVVQASGKFKLPDFSTNYQA*AVGMREGLE*VEEDEGRKAGKWVVATDGLAVLSAMQGGSRMTPLVAQVVDKAREGISFVYIPAHQGHAGNEKADELAKAAVEEGVRV 813 +K V+LQY HGTLRG E L+ C WS +V+ ++ +AG+ LG +ERRL D+ELPYPP RK LDI+LG +E WAE+ + GV++TDGSK GVGAAFVA D G G FKLPD+ +NYQA AV REG+ +E WV+A+DG AVL++M+G RMT LV +VV +A +G SFVY+P HQGHAGNE AD LAK A G RV Sbjct: 65 AKELVVLQYSHGTLRGRMEELRDGCAWSPHLAFVRQLMLEAGVELGG-SFERRLVDWELPYPPERKSLDITLGRKEEWAEELIQPRPG-VGVVYTDGSKKE-SGVGAAFVAQDPEGQNVGQGLFKLPDYCSNYQAEAVVQREGVIWTKEVGHPGVQNWVIASDGGAVLASMKGQRRMTSLVGEVVREAEDGHSFVYVPGHQGHAGNEVADALAKKATVSGRRV 284
BLAST of mRNA_H-akashiwo_Contig80.43.1 vs. uniprot
Match: A0A7S3XV03_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XV03_HETAK) HSP 1 Score: 148 bits (374), Expect = 7.820e-40 Identity = 84/160 (52.50%), Postives = 105/160 (65.62%), Query Frame = 1 Query: 268 GIVLGDVEYERRLHDFELPYPPYRKVLDISLGSREGWAEDRLTGLDAETGVIFTDGSKIPGQGVGAAFVAMDKGGVVQASGKFKLPDFSTNYQA*AVGMREGLE*VEEDEGRKAGKWVVATDGLAVLSAMQGGSRMTPLVAQVVDKAREGISFVYIPAHQ 747 G+ LG ERRL D+ELPYPP RK LDI+LG +E WAE+ + GV++TDGSK GVGAAFVA D G G FKLPD+ +NYQA AV REG+ +E WV+A+DG AVL++M+G RMT LV +VV +A +G SFVY+P HQ Sbjct: 1 GVELGG-SCERRLVDWELPYPPERKSLDITLGRKEEWAEELIQPRPG-VGVVYTDGSKKE-SGVGAAFVAQDPEGQNVGQGLFKLPDYCSNYQAEAVAQREGVIWTKEVGHPGVQNWVIASDGGAVLASMKGQRRMTSLVGEVVREAEDGHSFVYVPGHQ 157
BLAST of mRNA_H-akashiwo_Contig80.43.1 vs. uniprot
Match: A0A7S4DA35_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DA35_HETAK) HSP 1 Score: 145 bits (366), Expect = 3.360e-38 Identity = 80/183 (43.72%), Postives = 106/183 (57.92%), Query Frame = 1 Query: 601 RKAGKWVVATDGLAVLSAMQGGSRMTPLVAQVVDKAREGISFVYIPAHQGHAGNEKADELAKAAVEEGVRVEVQVPRGYTKGLARERTWRMWAAEWEAMRAEDEAKGEGVRRRTYLEFAPTLEDLKAGVWDKKVDARVLQLVSGHCNLWEYLHRFERREMPECALCGVEAGTVAHYYLLRCRR 1149 ++ G W+VA+D AVLS + R+TP+ A+VV A + S VY+PAH+G GNE+AD LA AV G V VPR +T+ LA + W W EW + D Y FAP+LE L+A VWDK + RVLQL+SGHC+L +LHRF E + C + G +YLLRC+R Sbjct: 11 QQEGGWIVASDSRAVLSNVLSQCRLTPITAEVVRLAGDCHSLVYVPAHKGIPGNEEADRLANLAVTNGTYALVDVPRAHTRRLAGDYFWGEWEREWGNAGSADPPP-------VYKRFAPSLEALRANVWDKGMGVRVLQLLSGHCSLGSFLHRFHLEETAKYEWC--DEGEAVGHYLLRCQR 184
BLAST of mRNA_H-akashiwo_Contig80.43.1 vs. uniprot
Match: A0A7S3XUZ5_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XUZ5_HETAK) HSP 1 Score: 145 bits (365), Expect = 3.950e-38 Identity = 88/169 (52.07%), Postives = 108/169 (63.91%), Query Frame = 1 Query: 316 ELPYPPYRKV-LDISL--GSREGWAEDRLTGLDAETGVIFTDGSKIPGQGVGAAFVAMDKGGVVQASGKFKLPDFSTNYQA*AVGMREGLE*VEEDEGRKAGKWVVATDGLAVLSAMQGGSRMTPLVAQVVDKAREGISFVYIPAHQGHAGNEKADELAKAAVEEGVRV 813 +L YPP RK LDI+L +E WAE+ + GV++TDGSK GVGAAFVA D G G FKLPD+ +NYQA AV REG+ +E WV+A+DG AVL++M+G RMT LV +VV +A +G SFVY+P HQGHAGNE AD LAK A G RV Sbjct: 15 QLLYPPERKKSLDITLVGQKKEEWAEELIEPRPG-VGVVYTDGSKKE-SGVGAAFVAQDPEGQNVGQGLFKLPDYCSNYQAEAVVQREGVIWTKEVGHPGVQNWVIASDGGAVLASMKGQRRMTSLVGEVVREAEDGHSFVYVPGHQGHAGNEVADALAKKATVSGRRV 181 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig80.43.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig80.43.1 >prot_H-akashiwo_Contig80.43.1 ID=prot_H-akashiwo_Contig80.43.1|Name=mRNA_H-akashiwo_Contig80.43.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=179bp MQGGSRMTPLVAQVVDKAREGISFVYIPAHQGHAGNEKADELAKAAVEEGback to top mRNA from alignment at H-akashiwo_Contig80:1871755..1872945+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig80.43.1 ID=mRNA_H-akashiwo_Contig80.43.1|Name=mRNA_H-akashiwo_Contig80.43.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1191bp|location=Sequence derived from alignment at H-akashiwo_Contig80:1871755..1872945+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig80:1871755..1872945+ >mRNA_H-akashiwo_Contig80.43.1 ID=mRNA_H-akashiwo_Contig80.43.1|Name=mRNA_H-akashiwo_Contig80.43.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=537bp|location=Sequence derived from alignment at H-akashiwo_Contig80:1871755..1872945+ (Heterosigma akashiwo CCMP452)back to top |