prot_H-akashiwo_Contig1259.13.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig1259.13.1
Unique Nameprot_H-akashiwo_Contig1259.13.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length58
Homology
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BLAST of mRNA_H-akashiwo_Contig1259.13.1 vs. uniprot
Match: A0A7S4DBN8_HETAK (Hypothetical protein (Fragment) n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DBN8_HETAK)

HSP 1 Score: 85.1 bits (209), Expect = 6.530e-18
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 0 
Query:    1 MNKFDAFIVVTSLIELIMAETSDASSGGLSXXXXXXXXXXXXLAKNWRDLQVLLQTAL 58
            MNKFDAFIVVTSLIELIMAETSDASSGGLSXXXXXXXXXXXXLAKNWRDLQVLLQTAL
Sbjct:    2 MNKFDAFIVVTSLIELIMAETSDASSGGLSXXXXXXXXXXXXLAKNWRDLQVLLQTAL 59
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1259.13.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7S4DBN8_HETAK6.530e-18100.00Hypothetical protein (Fragment) n=3 Tax=Heterosigm... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.287.930coord: 1..57
e-value: 2.0E-10
score: 42.6
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 2..56
IPR005821Ion transport domainPFAMPF00520Ion_transcoord: 1..57
e-value: 2.1E-9
score: 37.0
IPR043203Voltage-gated cation channel calcium and sodiumPANTHERPTHR10037VOLTAGE-GATED CATION CHANNEL CALCIUM AND SODIUMcoord: 1..56

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1259contigH-akashiwo_Contig1259:170082..171616 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1259.13.1mRNA_H-akashiwo_Contig1259.13.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig1259 170082..171628 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig1259.13.1 ID=prot_H-akashiwo_Contig1259.13.1|Name=mRNA_H-akashiwo_Contig1259.13.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=58bp
MNKFDAFIVVTSLIELIMAETSDASSGGLSALRTFRLFRVFKLAKNWRDL
QVLLQTAL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005821Ion_trans_dom
IPR043203VGCC_Ca_Na