prot_H-akashiwo_Contig1250.5.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig1250.5.1
Unique Nameprot_H-akashiwo_Contig1250.5.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length162
Homology
[Close]
BLAST of mRNA_H-akashiwo_Contig1250.5.1 vs. uniprot
Match: A0A7S3XVY7_HETAK (Palmitoyltransferase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XVY7_HETAK)

HSP 1 Score: 322 bits (826), Expect = 1.790e-108
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0 
Query:    1 MISNSPRGKEASVASSWGWGQLEQKSQMHDDLEDSQRGSERCSRPPSLSLGAHDGAQNQSGDFKLFGTTEDCKIWCSTDTWGLLMSFTLWAILLYSTSVYVYHSFIVHTFLEMHGVIFCVLVGATLAMHLKVMFTNPGAVPSDAEPPKTKKKRNPSLTGDPK 162
            MISNSPRGKEASVASSWGWGQLEQKSQMHDDLEDSQRGSERCSRPPSLSLGAHDGAQNQSGDFKLFGTTEDCKIWCSTDTWGLLMSFTLWAILLYSTSVYVYHSFIVHTFLEMHGVIFCVLVGATLAMHLKVMFTNPGAVPSDAEPPKTKKKRNPSLTGDPK
Sbjct:    1 MISNSPRGKEASVASSWGWGQLEQKSQMHDDLEDSQRGSERCSRPPSLSLGAHDGAQNQSGDFKLFGTTEDCKIWCSTDTWGLLMSFTLWAILLYSTSVYVYHSFIVHTFLEMHGVIFCVLVGATLAMHLKVMFTNPGAVPSDAEPPKTKKKRNPSLTGDPK 162
[Close]
BLAST of mRNA_H-akashiwo_Contig1250.5.1 vs. uniprot
Match: A0A835YVM4_9STRA (Palmitoyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVM4_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 1.080e-6
Identity = 32/83 (38.55%), Postives = 47/83 (56.63%), Query Frame = 0 
Query:   65 LFGTTEDCKIWCSTDTW-GLLMSFTLWAILLYSTSVYVYHSFIVHTFLEMHGVIFCVLVGATLAMHLKVMFTNPGAVPSDAEP 146
            LFGT+ED   W ++  W G+  +  +W +  Y+  + ++ S I  T+   H   FC L   +L  HLKVM T+PGAVP +A P
Sbjct:   41 LFGTSEDSISWFNSGDWCGVTTACVVWVLEAYAAFIVLWLSIIARTYSWPHVAAFCALCALSLWCHLKVMTTDPGAVPHNARP 123
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1250.5.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A7S3XVY7_HETAK1.790e-108100.00Palmitoyltransferase n=1 Tax=Heterosigma akashiwo ... [more]
A0A835YVM4_9STRA1.080e-638.55Palmitoyltransferase n=1 Tax=Tribonema minus TaxID... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 26..40
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..53
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 141..162
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 145..162

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1250contigH-akashiwo_Contig1250:157255..158020 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1250.5.1mRNA_H-akashiwo_Contig1250.5.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig1250 157255..158020 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig1250.5.1 ID=prot_H-akashiwo_Contig1250.5.1|Name=mRNA_H-akashiwo_Contig1250.5.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=162bp
MISNSPRGKEASVASSWGWGQLEQKSQMHDDLEDSQRGSERCSRPPSLSL
GAHDGAQNQSGDFKLFGTTEDCKIWCSTDTWGLLMSFTLWAILLYSTSVY
VYHSFIVHTFLEMHGVIFCVLVGATLAMHLKVMFTNPGAVPSDAEPPKTK
KKRNPSLTGDPK
back to top