prot_H-akashiwo_Contig1198.6.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-akashiwo_Contig1198.6.1
Unique Name	prot_H-akashiwo_Contig1198.6.1
Type	polypeptide
Organism	Heterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length	360

Homology

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BLAST of mRNA_H-akashiwo_Contig1198.6.1 vs. uniprot
Match: A0A7S2V6J5_9STRA (Poly(A)-specific ribonuclease (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6J5_9STRA)

HSP 1 Score: 390 bits (1003), Expect = 4.190e-133
Identity = 186/274 (67.88%), Postives = 219/274 (79.93%), Query Frame = 0

Query:   70 FKTSKGISVEIREVWADNLDAEMNEIRKMAERHHYIAMDTEFPGVVARPIADYNSPDYQYQTLRCNVDLLKIIQLGLAFVQANGDPVPGCCCWQVNFRFSLREDMYAQESIDLLKGSGISFAAHERRGVDPHRFGELLTTSGLVLMDRVKWVSFHSGYDFGYLLKLLTAQALPAEEGRFFEVLKLYFPNIFDIKYLVASVDGVHGGLQRLAEELDVERVGPMHQAGSDSLLTASTFFKVVQARFG-GVEHMEAEKFVGQLYGLGGNATVYKPKG 342
            +    G SVEIR+VWA NL+ EM  IR++  R+ +IAMDTEFPGVVARP +DYNS DY YQTLRCNVDLLKIIQLG+AF   NG+   GC CWQ NF+F+L EDMYAQ+SIDLLK SGI F  HE+ G+D H FGELL TSGLVLMD VKW+SFHSGYDFGYLLK+LT QALPAEE  FFE+L+LYFP I+DIKYL+   DG+HGGL +LAE++ VER+GPMHQAGSDSLLTA  FF++++ RF   +   +  KF G+LYGLGGN TVYKPKG
Sbjct:    1 YTAPNGKSVEIRDVWASNLEQEMACIRELVPRYPFIAMDTEFPGVVARPASDYNSSDYMYQTLRCNVDLLKIIQLGIAFADKNGEIAEGCACWQFNFKFNLSEDMYAQDSIDLLKASGIEFTRHEKYGIDVHHFGELLITSGLVLMDNVKWISFHSGYDFGYLLKILTCQALPAEEAHFFELLRLYFPCIYDIKYLMTICDGIHGGLNKLAEDIKVERIGPMHQAGSDSLLTAQAFFRLIELRFSVPISEWDDSKFRGELYGLGGNHTVYKPKG 274

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BLAST of mRNA_H-akashiwo_Contig1198.6.1 vs. uniprot
Match: A0A835Z498_9STRA (Poly(A)-specific ribonuclease n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z498_9STRA)

HSP 1 Score: 367 bits (941), Expect = 1.070e-122
Identity = 173/266 (65.04%), Postives = 209/266 (78.57%), Query Frame = 0

Query:   75 GISVEIREVWADNLDAEMNEIRKMAERHHYIAMDTEFPGVVARPIADYNSPDYQYQTLRCNVDLLKIIQLGLAFVQANGDPVPGCCCWQVNFRFSLREDMYAQESIDLLKGSGISFAAHERRGVDPHRFGELLTTSGLVLMDRVKWVSFHSGYDFGYLLKLLTAQALPAEEGRFFEVLKLYFPNIFDIKYLVASVDGVHGGLQRLAEELDVERVGPMHQAGSDSLLTASTFFKVVQARFGGVEHMEAEKFVGQLYGLGGNATVYKP 340
            G  +EIR VW DNL+ EM +IR++ E + Y+AMDTEFPGVVARPI D+   DYQYQTLRCNVDLLKIIQLGL+F    G+   GCCCWQ NF+FSL EDMYAQ+SIDLLK SGI+F  HE RG+D   FGELL TSGLVL+D V WVSFHSGYDFGYLLK+LT+ ALP +E  FF +LKLYFP ++DIKYL+AS DG HGGL +L ++L VER+G  HQAGSDSLLTA  FFK+V+ +F G+ ++  EK+  +L+G G N TVY+P
Sbjct:   29 GKYLEIRNVWVDNLEEEMAKIREVVETYPYVAMDTEFPGVVARPIGDFGQSDYQYQTLRCNVDLLKIIQLGLSFANEKGEFAEGCCCWQFNFKFSLGEDMYAQDSIDLLKQSGINFDQHEARGIDVLEFGELLMTSGLVLVDNVTWVSFHSGYDFGYLLKVLTSCALPGQEKEFFHLLKLYFPRLYDIKYLMASQDGFHGGLNKLGDDLSVERIGQKHQAGSDSLLTAQVFFKIVETKFNGMSNLSREKYNSELFGYGNNNTVYRP 294

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BLAST of mRNA_H-akashiwo_Contig1198.6.1 vs. uniprot
Match: W7TF71_9STRA (Poly(A)-specific ribonuclease n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TF71_9STRA)

HSP 1 Score: 358 bits (920), Expect = 1.740e-119
Identity = 168/273 (61.54%), Postives = 215/273 (78.75%), Query Frame = 0

Query:   69 VFKTSKGISVEIREVWADNLDAEMNEIRKMAERHHYIAMDTEFPGVVARPIADYNSPDYQYQTLRCNVDLLKIIQLGLAFVQANGDPVPGCCCWQVNFRFSLREDMYAQESIDLLKGSGISFAAHERRGVDPHRFGELLTTSGLVLMDRVKWVSFHSGYDFGYLLKLLTAQALPAEEGRFFEVLKLYFPNIFDIKYLVASVDGVHGGLQRLAEELDVERVGPMHQAGSDSLLTASTFFKVVQARFGGVEHMEAEKFVGQLYGLGGNATVYKPK 341
            ++    G  +EIREVW +NLD EM  +R++ E++ Y+AMDTEFPGVVARP+ D ++ DYQY+TL+CNVDLLKIIQLGL+F  ++G+  P C  WQ NFRFSL +D+YA++SI+LLK SGI F+ HE  G+D  RFGELL TSGLVLMD V+W+SFHSGYDFGYLLK+LT  ALP++E  FF++L+ YFP  +DIKYL+ +  G+HGGLQR+AEEL V RVGPMHQAGSDSLLTA TFF++    F G+ ++  EKF G+L+GLG N TVY+ K
Sbjct:   24 IYTGQDGKRMEIREVWLENLDKEMVAVREVVEQYPYVAMDTEFPGVVARPVGDVSASDYQYKTLKCNVDLLKIIQLGLSFADSDGNSPPECPTWQFNFRFSLSDDIYAEDSIELLKQSGIDFSKHESHGIDVFRFGELLMTSGLVLMDEVRWISFHSGYDFGYLLKVLTCAALPSDENGFFDLLRTYFPCFYDIKYLMTACQGLHGGLQRIAEELSVARVGPMHQAGSDSLLTAQTFFRLCAVSFDGLNNLSDEKFKGELFGLGHNHTVYRSK 296

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BLAST of mRNA_H-akashiwo_Contig1198.6.1 vs. uniprot
Match: A0A7S2SP02_9STRA (Poly(A)-specific ribonuclease n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SP02_9STRA)

HSP 1 Score: 357 bits (917), Expect = 2.790e-119
Identity = 176/280 (62.86%), Postives = 215/280 (76.79%), Query Frame = 0

Query:   66 GGGVFKTSKGISVEIREVWADNLDAEMNEIRKMAERHHYIAMDTEFPGVVARPIADYNSPDYQYQTLRCNVDLLKIIQLGLAFVQANGDPVPGCCCWQVNFRFSLREDMYAQESIDLLKGSGISFAAHERRGVDPHRFGELLTTSGLVLMDRVKWVSFHSGYDFGYLLKLLTAQALPAEEGRFFEVLKLYFPNIFDIKYLVASVDGVHGGLQRLAEELDVERVGPMHQAGSDSLLTASTFFKVVQARFGGVEHMEAE-KFVGQLYGLGGNATVYKPKGPP 344
            G GVF    G  VEIR+VW  NLD EM  IRK+   + ++AMDTEFPGVVARPI D  + DYQYQTLRCNVDLLKIIQLG+AF    G+  PGC  WQ NF+F++ EDMYAQ+SIDLL  +GI F  HE  G+D   FGEL+ TSGLVL+D V+W+SFHSGYDFGYLLKLLT  ALP  E  FFEVLK+YFP  FDIKY+V S + +HGGLQ++A++L+ +R+GPMHQAGSDSL+TA+TFF++ + RFGG   +E + KFV +L+GLGGN TVY+P  PP
Sbjct:   50 GSGVFPGPNGKMVEIRDVWGHNLDEEMANIRKIVVDYPFVAMDTEFPGVVARPITDQYAHDYQYQTLRCNVDLLKIIQLGIAFSNEKGEHPPGCVSWQFNFKFNIEEDMYAQDSIDLLMEAGIDFDRHEEEGIDVMYFGELMITSGLVLVDSVRWISFHSGYDFGYLLKLLTCSALPGGEQEFFEVLKIYFPYYFDIKYMVHSTE-LHGGLQKIADDLNCQRIGPMHQAGSDSLITAATFFRLSEERFGGPSSVEKDHKFVNELFGLGGNCTVYRP--PP 326

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BLAST of mRNA_H-akashiwo_Contig1198.6.1 vs. uniprot
Match: K8YSH1_NANGC (Poly(A)-specific ribonuclease n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8YSH1_NANGC)

HSP 1 Score: 358 bits (920), Expect = 2.290e-117
Identity = 168/273 (61.54%), Postives = 215/273 (78.75%), Query Frame = 0

Query:   69 VFKTSKGISVEIREVWADNLDAEMNEIRKMAERHHYIAMDTEFPGVVARPIADYNSPDYQYQTLRCNVDLLKIIQLGLAFVQANGDPVPGCCCWQVNFRFSLREDMYAQESIDLLKGSGISFAAHERRGVDPHRFGELLTTSGLVLMDRVKWVSFHSGYDFGYLLKLLTAQALPAEEGRFFEVLKLYFPNIFDIKYLVASVDGVHGGLQRLAEELDVERVGPMHQAGSDSLLTASTFFKVVQARFGGVEHMEAEKFVGQLYGLGGNATVYKPK 341
            ++    G  +EIREVW +NLD EM  +R++ E++ Y+AMDTEFPGVVARP+ D ++ DYQY+TL+CNVDLLKIIQLGL+F  ++G+  P C  WQ NFRFSL +D+YA++SI+LLK SGI F+ HE  G+D  RFGELL TSGLVLMD V+W+SFHSGYDFGYLLK+LT  ALP++E  FF++L+ YFP  +DIKYL+ +  G+HGGLQR+AEEL V RVGPMHQAGSDSLLTA TFF++    F G+ ++  EKF G+L+GLG N TVY+ K
Sbjct:  177 IYTGQDGKRMEIREVWLENLDKEMVAVREVVEQYPYVAMDTEFPGVVARPVGDVSASDYQYKTLKCNVDLLKIIQLGLSFADSDGNSPPECPTWQFNFRFSLSDDIYAEDSIELLKQSGIDFSKHESHGIDVFRFGELLMTSGLVLMDEVRWISFHSGYDFGYLLKVLTCAALPSDENGFFDLLRTYFPCFYDIKYLMTACQGLHGGLQRIAEELSVARVGPMHQAGSDSLLTAQTFFRLCAVSFDGLNNLSDEKFKGELFGLGHNHTVYRSK 449

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BLAST of mRNA_H-akashiwo_Contig1198.6.1 vs. uniprot
Match: A0A836C813_9STRA (Poly(A)-specific ribonuclease n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C813_9STRA)

HSP 1 Score: 353 bits (906), Expect = 2.610e-117
Identity = 170/272 (62.50%), Postives = 209/272 (76.84%), Query Frame = 0

Query:   70 FKTSKGISVEIREVWADNLDAEMNEIRKMAERHHYIAMDTEFPGVVARPIADYNSPDYQYQTLRCNVDLLKIIQLGLAFVQANGDPVPGCCCWQVNFRFSLREDMYAQESIDLLKGSGISFAAHERRGVDPHRFGELLTTSGLVLMDRVKWVSFHSGYDFGYLL-KLLTAQALPAEEGRFFEVLKLYFPNIFDIKYLVASVDGVHGGLQRLAEELDVERVGPMHQAGSDSLLTASTFFKVVQARFGGVEHMEAEKFVGQLYGLGGNATVYKP 340
            +K   G  VEIR VWADNL+ EM +IR++ E++ YIAMDTEFPGVVARP+ D +  DYQYQTLRCNVDLLKIIQLGL+F    G+   GCCCWQ NF+FSL EDMYAQ+SIDLLK SG+ F  H  RG+D   FGELL  SGLVL+D V W+SFHSGYDFGYLL K+LT+ ALP +E  FF +LK+YFP ++DIKYL+A+ DG HGGL +L ++L VER+G  HQAGSDSLLTA  FFK+V  +F G+ ++  EK+  +L+G G N TVY+P
Sbjct:   20 YKGPDGKLVEIRNVWADNLEEEMAKIREVVEKYPYIAMDTEFPGVVARPLGDVSQSDYQYQTLRCNVDLLKIIQLGLSFANEKGEFAEGCCCWQFNFKFSLDEDMYAQDSIDLLKQSGLEFRDHCARGIDVIDFGELLIASGLVLVDNVTWISFHSGYDFGYLLGKVLTSSALPGQEKDFFTLLKMYFPRLYDIKYLMANQDGFHGGLNKLGDDLAVERIGQKHQAGSDSLLTAQVFFKIVDTKFNGMSNLSREKYNLELFGYGNNNTVYRP 291

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BLAST of mRNA_H-akashiwo_Contig1198.6.1 vs. uniprot
Match: A0A6H5JI77_9PHAE (Poly(A)-specific ribonuclease n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI77_9PHAE)

HSP 1 Score: 353 bits (907), Expect = 7.150e-116
Identity = 172/272 (63.24%), Postives = 207/272 (76.10%), Query Frame = 0

Query:   75 GISVEIREVWADNLDAEMNEIRKMAERHHYIAMDTEFPGVVARPIADYNSPDYQYQTLRCNVDLLKIIQLGLAFVQANGD-PVPGCCCWQVNFRFSLREDMYAQESIDLLKGSGISFAAHERRGVDPHRFGELLTTSGLVLMDRVKWVSFHSGYDFGYLLKLLTAQALPAEEGRFFEVLKLYFPNIFDIKYLVASVDGVHGGLQRLAEELDVERVGPMHQAGSDSLLTASTFFKVVQARFGGVEHMEAEK----FVGQLYGLGGNAT-VYKP 340
            G  VEIR VWADNL+ EM  IR++ + + Y+AMDTEFPGVVARP+ D+N PD+QYQTLRCNVD+LK+IQLGL+F    G+ P  GCC WQ NF F+L EDMYA +SI+LLK SGI F  HERRG+D   FGELL TSGLVL+  V W+SFHSGYDFGYL+KLLT   LP +E  FF++L+LYFP I+DIKYLV+S DG HGGL +LA++L VER+GPMHQAGSDSLLT   F KV    F GV +++  K    F GQLYG GGN T +Y+P
Sbjct:   55 GRLVEIRNVWADNLETEMVIIRELVQDYPYVAMDTEFPGVVARPVGDFNQPDFQYQTLRCNVDMLKMIQLGLSFANEKGELPEDGCCTWQFNFAFNLSEDMYAHDSIELLKNSGIDFQGHERRGIDLQDFGELLMTSGLVLLPNVTWLSFHSGYDFGYLIKLLTCSNLPTQESDFFDLLQLYFPKIYDIKYLVSSQDGFHGGLNKLADDLKVERIGPMHQAGSDSLLTEQVFLKVADVYFNGVANLDLGKSRGKFAGQLYGYGGNQTGIYRP 326

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BLAST of mRNA_H-akashiwo_Contig1198.6.1 vs. uniprot
Match: D8LIU5_ECTSI (Poly(A)-specific ribonuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIU5_ECTSI)

HSP 1 Score: 351 bits (900), Expect = 8.650e-116
Identity = 171/267 (64.04%), Postives = 202/267 (75.66%), Query Frame = 0

Query:   75 GISVEIREVWADNLDAEMNEIRKMAERHHYIAMDTEFPGVVARPIADYNSPDYQYQTLRCNVDLLKIIQLGLAFVQANGD-PVPGCCCWQVNFRFSLREDMYAQESIDLLKGSGISFAAHERRGVDPHRFGELLTTSGLVLMDRVKWVSFHSGYDFGYLLKLLTAQALPAEEGRFFEVLKLYFPNIFDIKYLVASVDGVHGGLQRLAEELDVERVGPMHQAGSDSLLTASTFFKVVQARFGGVEHMEAEK----FVGQLYGLGGNAT 336
            G  VEIR VWADNL+ EM  IR++ E + Y+AMDTEFPGVVARP+ D+N PD+QYQTLRCNVD+LK+IQLGL+F    G+ P  GCC WQ NF F+L EDMYA +SI LLK SGI F  HERRG+D   FGELL TSGLVL+  V W+SFHSGYDFGYL+KLLT   LP +E  FF++L+LYFP I+DIKYLV+S DG HGGL +LA++L VER+GPMHQAGSDSLLT   F KV    F GV +++  K    F GQLYG GGN T
Sbjct:   52 GRLVEIRNVWADNLETEMVIIRELVEDYPYVAMDTEFPGVVARPVGDFNQPDFQYQTLRCNVDMLKMIQLGLSFANEKGELPEDGCCTWQFNFAFNLSEDMYAHDSIQLLKNSGIDFQGHERRGIDLQDFGELLMTSGLVLLPNVTWLSFHSGYDFGYLIKLLTCSNLPTQESDFFDLLQLYFPKIYDIKYLVSSQDGFHGGLNKLADDLKVERIGPMHQAGSDSLLTEQVFLKVADVYFNGVANLDQGKSRGKFAGQLYGYGGNQT 318

[Close]

BLAST of mRNA_H-akashiwo_Contig1198.6.1 vs. uniprot
Match: A0A7S2F743_9STRA (Poly(A)-specific ribonuclease n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F743_9STRA)

HSP 1 Score: 343 bits (880), Expect = 4.690e-114
Identity = 165/278 (59.35%), Postives = 208/278 (74.82%), Query Frame = 0

Query:   67 GGVFKTSKGISVEIREVWADNLDAEMNEIRKMAERHHYIAMDTEFPGVVARPIADYNSPDYQYQTLRCNVDLLKIIQLGLAFVQANGDPVPGCCCWQVNFRFSLREDMYAQESIDLLKGSGISFAAHERRGVDPHRFGELLTTSGLVLMDRVKWVSFHSGYDFGYLLKLLTAQALPAEEGRFFEVLKLYFPNIFDIKYLVASVDGVHGGLQRLAEELDVERVGPMHQAGSDSLLTASTFFKVVQARFGGVEHMEAEKFVGQLYGLGGNATVYKPKGPP 344
            G +F    G  VEIR+VW  NLD+EM  +RK  E + YIAMDTEFPGVVARPI D  + DYQYQTLRCNVDLLKIIQLG+A V   GD    C  WQ NF+F+L+EDMYAQ+SIDLLK +GI F  HE  G+D + FGEL+TTSGLVL++ V+W+SFHSGYDFGYLLKLLT  ALP+ E  FFE+LK YFP ++DIK+++  ++ +HGGLQ++A++L  +R+GPMHQAGSD+LLTA T+FK+             +K+  +L+GLGGN TVY+P  PP
Sbjct:   23 GSIFPGPNGKLVEIRDVWRSNLDSEMALVRKCVEDYPYIAMDTEFPGVVARPITDQYANDYQYQTLRCNVDLLKIIQLGIALVNEKGDHPDDCVAWQFNFKFNLQEDMYAQDSIDLLKEAGIDFKRHETEGIDVNYFGELMTTSGLVLVENVRWISFHSGYDFGYLLKLLTCVALPSNESEFFELLKFYFPYLYDIKFMINGMNDLHGGLQKIADDLHAQRIGPMHQAGSDALLTADTYFKLCARLESDSAQDYDQKYENELFGLGGNCTVYRP--PP 298

[Close]

BLAST of mRNA_H-akashiwo_Contig1198.6.1 vs. uniprot
Match: A0A7S2E3S6_9STRA (Poly(A)-specific ribonuclease n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2E3S6_9STRA)

HSP 1 Score: 339 bits (870), Expect = 5.640e-112
Identity = 165/276 (59.78%), Postives = 207/276 (75.00%), Query Frame = 0

Query:   70 FKTSKGISVEIREVWADNLDAEMNEIRKMAERHHYIAMDTEFPGVVARPIADYNSPDYQYQTLRCNVDLLKIIQLGLAFVQANGDPVPGCCCWQVNFRFSLREDMYAQESIDLLKGSGISFAAHERRGVDPHRFGELLTTSGLVLMDRVKWVSFHSGYDFGYLLKLLTAQALPAEEGRFFEVLKLYFPNIFDIKYLVASVDGVHGGLQRLAEELDVERVGPMHQAGSDSLLTASTFFKVVQARFG------GVEHMEAEKFVGQLYGLGGNATVYK 339
            F+   G ++EIR VWA+N+  EM  IR++ E H Y+AMDTEFPGVVARP+++  SPD+ Y++L+CNVDLLKIIQLGL+F   +G+  PGC CWQ NF+FSL +DM+AQ+SIDLL  SGISF  H  RG+DPHRFGELL  SGLVL DRVKWVSFHSGYD+GYLLKLLT Q+LP +E  FF+ LKLYFP I+DIKY+ +  DG  GGLQ+LA++L   R+GP HQAGSDSLLT +T+F + + +F       G   ++  KF  +LYG G N TV K
Sbjct:   63 FQDDTGKNLEIRNVWAENVQEEMAVIREIIETHPYVAMDTEFPGVVARPVSETYSPDFHYKSLKCNVDLLKIIQLGLSFADEDGNFAPGCPCWQFNFKFSLNDDMFAQDSIDLLVNSGISFEDHASRGIDPHRFGELLMVSGLVLDDRVKWVSFHSGYDYGYLLKLLTTQSLPMDEKGFFDTLKLYFPTIYDIKYMTSLCDGHFGGLQKLADDLGCPRIGPEHQAGSDSLLTMTTYFALAEKKFTTSAGPEGALVVDDTKFKNELYGYGSNHTVRK 338

The following BLAST results are available for this feature:

BLAST of mRNA_H-akashiwo_Contig1198.6.1 vs. uniprot

BLAST of mRNA_H-akashiwo_Contig1198.6.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A7S2V6J5_9STRA	4.190e-133	67.88	Poly(A)-specific ribonuclease (Fragment) n=1 Tax=F...	[more]
A0A835Z498_9STRA	1.070e-122	65.04	Poly(A)-specific ribonuclease n=1 Tax=Tribonema mi...	[more]
W7TF71_9STRA	1.740e-119	61.54	Poly(A)-specific ribonuclease n=1 Tax=Nannochlorop...	[more]
A0A7S2SP02_9STRA	2.790e-119	62.86	Poly(A)-specific ribonuclease n=1 Tax=Rhizochromul...	[more]
K8YSH1_NANGC	2.290e-117	61.54	Poly(A)-specific ribonuclease n=2 Tax=Monodopsidac...	[more]
A0A836C813_9STRA	2.610e-117	62.50	Poly(A)-specific ribonuclease n=1 Tax=Tribonema mi...	[more]
A0A6H5JI77_9PHAE	7.150e-116	63.24	Poly(A)-specific ribonuclease n=1 Tax=Ectocarpus s...	[more]
D8LIU5_ECTSI	8.650e-116	64.04	Poly(A)-specific ribonuclease n=1 Tax=Ectocarpus s...	[more]
A0A7S2F743_9STRA	4.690e-114	59.35	Poly(A)-specific ribonuclease n=1 Tax=Dictyocha sp...	[more]
A0A7S2E3S6_9STRA	5.640e-112	59.78	Poly(A)-specific ribonuclease n=1 Tax=Helicotheca ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 68..335 e-value: 4.3E-90 score: 303.5
IPR006941	Ribonuclease CAF1	PFAM	PF04857	CAF1	coord: 83..155 e-value: 6.6E-9 score: 35.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 340..359
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 50..65
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..68
None	No IPR available	PANTHER	PTHR10797:SF0	POP2, ISOFORM E	coord: 69..334
IPR039637	CCR4-NOT transcription complex subunit 7/8/Pop2	PANTHER	PTHR10797	CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT	coord: 69..334
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 80..330

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-akashiwo_Contig1198	contig	H-akashiwo_Contig1198:184525..186041 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Heterosigma akashiwo CCMP452 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-akashiwo_Contig1198.6.1	mRNA_H-akashiwo_Contig1198.6.1	Heterosigma akashiwo CCMP452	mRNA	H-akashiwo_Contig1198 184398..186302 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-akashiwo_Contig1198.6.1 ID=prot_H-akashiwo_Contig1198.6.1|Name=mRNA_H-akashiwo_Contig1198.6.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=360bp
MKNSENVNLEDEGGGKPSAIKEGNQSAAFPFGDEKQNGFMSGNAGFPLGS
HHNHEDEDDDDRPPIGGGVFKTSKGISVEIREVWADNLDAEMNEIRKMAE
RHHYIAMDTEFPGVVARPIADYNSPDYQYQTLRCNVDLLKIIQLGLAFVQ
ANGDPVPGCCCWQVNFRFSLREDMYAQESIDLLKGSGISFAAHERRGVDP
HRFGELLTTSGLVLMDRVKWVSFHSGYDFGYLLKLLTAQALPAEEGRFFE
VLKLYFPNIFDIKYLVASVDGVHGGLQRLAEELDVERVGPMHQAGSDSLL
TASTFFKVVQARFGGVEHMEAEKFVGQLYGLGGNATVYKPKGPPPPPFAA
AANGEKEEG*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036397	RNaseH_sf
IPR006941	RNase_CAF1
IPR039637	CNOT7/CNOT8/Pop2
IPR012337	RNaseH-like_sf