prot_H-akashiwo_Contig1136.3.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig1136.3.1
Unique Nameprot_H-akashiwo_Contig1136.3.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length85
Homology
BLAST of mRNA_H-akashiwo_Contig1136.3.1 vs. uniprot
Match: A0A379N3Q5_9PROT (Protein of uncharacterized function (DUF3253) n=7 Tax=Roseomonas TaxID=125216 RepID=A0A379N3Q5_9PROT)

HSP 1 Score: 75.5 bits (184), Expect = 6.250e-16
Identity = 41/81 (50.62%), Postives = 54/81 (66.67%), Query Frame = 0
Query:    3 RETIRREILRLATARGFEKTLCPSEVARSVARQGEDWRALMEPVRCVGRELVQEGFIIFMQRGQEIDAFGEVRGPIRFRLS 83
            RE I   I RLAT RG EK++CPSEVAR +   GE WR LM PVR    EL ++G I  +++G+ ++  GEVRG IR R++
Sbjct:   23 RERIAESIRRLATQRGAEKSICPSEVARELG--GESWRGLMRPVRDTAMELARQGEIEVLRKGKPVEP-GEVRGVIRLRIA 100          
BLAST of mRNA_H-akashiwo_Contig1136.3.1 vs. uniprot
Match: A0A419HL90_9PSEU (DUF3253 domain-containing protein n=1 Tax=Pseudonocardiaceae bacterium YIM PH 21723 TaxID=2340915 RepID=A0A419HL90_9PSEU)

HSP 1 Score: 74.3 bits (181), Expect = 1.200e-15
Identity = 41/80 (51.25%), Postives = 52/80 (65.00%), Query Frame = 0
Query:    4 ETIRREILRLATARGFEKTLCPSEVARSVARQGEDWRALMEPVRCVGRELVQEGFIIFMQRGQEIDAFGEVRGPIRFRLS 83
            E +R  IL LA+ARG + +LCPSEVAR+VA   +DWR L+  VR   R L + G +   QRG+E+D  GE  GPIR  LS
Sbjct:    6 EQLRETILSLASARGPDSSLCPSEVARAVA---DDWRPLLPQVRNEARALARAGRVRLTQRGRELDPDGEWEGPIRIHLS 82          
BLAST of mRNA_H-akashiwo_Contig1136.3.1 vs. uniprot
Match: A0A1W9Z2M0_9MYCO (S-adenosylmethionine tRNA ribosyltransferase n=1 Tax=Mycolicibacterium bacteremicum TaxID=564198 RepID=A0A1W9Z2M0_9MYCO)

HSP 1 Score: 73.6 bits (179), Expect = 2.180e-15
Identity = 37/78 (47.44%), Postives = 50/78 (64.10%), Query Frame = 0
Query:    6 IRREILRLATARGFEKTLCPSEVARSVARQGEDWRALMEPVRCVGRELVQEGFIIFMQRGQEIDAFGEVRGPIRFRLS 83
            +RR IL L   RG +KT+CPS+ ARSV   G+DWR LM+  R + R+L + G +   QRG+ +D  G  RGPIR R +
Sbjct:    7 LRRAILSLTRERGSDKTICPSDAARSVG--GQDWRDLMDQARDIARDLARRGEVEISQRGEVLDPDGTWRGPIRIRTT 82          
BLAST of mRNA_H-akashiwo_Contig1136.3.1 vs. uniprot
Match: K5BKN3_MYCHD (Uncharacterized protein n=2 Tax=Mycolicibacterium hassiacum (strain DSM 44199 / CIP 105218 / JCM 12690 / 3849) TaxID=1122247 RepID=K5BKN3_MYCHD)

HSP 1 Score: 73.2 bits (178), Expect = 2.860e-15
Identity = 38/78 (48.72%), Postives = 50/78 (64.10%), Query Frame = 0
Query:    4 ETIRREILRLATARGFEKTLCPSEVARSVARQGEDWRALMEPVRCVGRELVQEGFIIFMQRGQEIDAFGEVRGPIRFR 81
            E +   ILRLA ARG +KT+CPS+ AR+V   G+DWR LM+  R   R+L + G +   QRG+ +D  G  RGPIR R
Sbjct:    3 ERLHAAILRLARARGPDKTICPSDAARAVG--GDDWRELMDDAREAARDLARRGEVELTQRGEVLDPDGTWRGPIRIR 78          
BLAST of mRNA_H-akashiwo_Contig1136.3.1 vs. uniprot
Match: A0A1S8D322_9PROT (Uncharacterized protein n=2 Tax=Roseomonas TaxID=125216 RepID=A0A1S8D322_9PROT)

HSP 1 Score: 72.0 bits (175), Expect = 7.570e-15
Identity = 38/74 (51.35%), Postives = 51/74 (68.92%), Query Frame = 0
Query:   10 ILRLATARGFEKTLCPSEVARSVARQGEDWRALMEPVRCVGRELVQEGFIIFMQRGQEIDAFGEVRGPIRFRLS 83
            I RLAT RG EK++CPSEVAR +   GE WR LM PVR    EL ++G I  +++G+ ++  GEVRG IR R++
Sbjct:    5 IRRLATQRGAEKSICPSEVARELG--GESWRGLMRPVRDTAMELARQGEIEVLRKGKPVEP-GEVRGVIRLRIA 75          
BLAST of mRNA_H-akashiwo_Contig1136.3.1 vs. uniprot
Match: UPI001FF85A35 (DUF3253 domain-containing protein n=1 Tax=Roseomonas gilardii TaxID=257708 RepID=UPI001FF85A35)

HSP 1 Score: 72.4 bits (176), Expect = 1.020e-14
Identity = 40/85 (47.06%), Postives = 54/85 (63.53%), Query Frame = 0
Query:    3 RETIRREILRLATARGFEKTLCPSEVARSVARQGEDWRALMEPVRCVGRELVQEGFIIFMQRGQEID----AFGEVRGPIRFRLS 83
            RE I   I RLAT RG EK++CPSEVAR +   GE WR+LM PVR    EL + G I  +++G+ ++      G+VRG IR R++
Sbjct:   18 RERIAESIRRLATQRGAEKSICPSEVARELG--GESWRSLMRPVRDTALELARRGEIEVLRKGKPVEPGPKGHGDVRGVIRLRIA 100          
BLAST of mRNA_H-akashiwo_Contig1136.3.1 vs. uniprot
Match: UPI0019EF5F07 (DUF3253 domain-containing protein n=1 Tax=filamentous cyanobacterium LEGE 07170 TaxID=1828880 RepID=UPI0019EF5F07)

HSP 1 Score: 68.9 bits (167), Expect = 1.650e-13
Identity = 39/80 (48.75%), Postives = 51/80 (63.75%), Query Frame = 0
Query:    4 ETIRREILRLATARGFEKTLCPSEVARSVARQGEDWRALMEPVRCVGRELVQEGFIIFMQRGQEIDAFGEVRGPIRFRLS 83
            +TIR+ IL    ARG EKT+CPSEVAR +   G DWR+LM+ VR  G  LV    I+  Q+G+ +D     +GPIR+RL 
Sbjct:    9 QTIRQCILEKTQARGAEKTICPSEVARELG--GNDWRSLMDSVRQAGIALVDADKILVTQKGKVVDPH-IAKGPIRYRLK 85          
BLAST of mRNA_H-akashiwo_Contig1136.3.1 vs. uniprot
Match: A0A5D0XNB7_9MICC (DUF3253 domain-containing protein n=1 Tax=Arthrobacter echini TaxID=1529066 RepID=A0A5D0XNB7_9MICC)

HSP 1 Score: 68.9 bits (167), Expect = 2.070e-13
Identity = 38/76 (50.00%), Postives = 46/76 (60.53%), Query Frame = 0
Query:    6 IRREILRLATARGFEKTLCPSEVARSVARQGEDWRALMEPVRCVGRELVQEGFIIFMQRGQEIDAFGEVRGPIRFR 81
            +R EILR+A  RG+ KTLCPSE ARS+   GE WR LM   R V  EL   G +   Q G  +DA  + RGP+R R
Sbjct:   10 LRAEILRIAEHRGYGKTLCPSEAARSIG--GEQWRELMPAARRVAFELAAAGLVEVTQGGDPVDA--DARGPVRIR 81          
BLAST of mRNA_H-akashiwo_Contig1136.3.1 vs. uniprot
Match: A0A6I5QR36_9CYAN (DUF3253 domain-containing protein n=1 Tax=Leptolyngbya sp. SIO1E4 TaxID=2607768 RepID=A0A6I5QR36_9CYAN)

HSP 1 Score: 67.8 bits (164), Expect = 4.700e-13
Identity = 38/74 (51.35%), Postives = 47/74 (63.51%), Query Frame = 0
Query:   10 ILRLATARGFEKTLCPSEVARSVARQGEDWRALMEPVRCVGRELVQEGFIIFMQRGQEIDAFGEVRGPIRFRLS 83
            +L L   RG  KT+CPSEVAR++   G+DWR LM  VR VG  LV  G I+  Q+GQ ID     +GPIR+RL 
Sbjct:   13 LLTLVRDRGPNKTICPSEVARTLG--GDDWRTLMPRVRSVGVTLVNAGDIVVTQKGQVIDP-QTAKGPIRYRLK 83          
BLAST of mRNA_H-akashiwo_Contig1136.3.1 vs. uniprot
Match: UPI001BD9BAAD (DUF3253 domain-containing protein n=1 Tax=Williamsia sp. CHRR-6 TaxID=2835871 RepID=UPI001BD9BAAD)

HSP 1 Score: 67.8 bits (164), Expect = 4.950e-13
Identity = 38/78 (48.72%), Postives = 48/78 (61.54%), Query Frame = 0
Query:    4 ETIRREILRLATARGFEKTLCPSEVARSVARQGEDWRALMEPVRCVGRELVQEGFIIFMQRGQEIDAFGEVRGPIRFR 81
            + +R +IL L  AR    T+CPSEVAR++A     WR LM+ VR V RELV+EG +   QRG  +D     RGPIR R
Sbjct:    8 QRLREQILALLDARRDGATICPSEVARAIAPA--QWRRLMDAVRAVARELVEEGVVEITQRGHVVDP-ASARGPIRIR 82          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1136.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A379N3Q5_9PROT6.250e-1650.62Protein of uncharacterized function (DUF3253) n=7 ... [more]
A0A419HL90_9PSEU1.200e-1551.25DUF3253 domain-containing protein n=1 Tax=Pseudono... [more]
A0A1W9Z2M0_9MYCO2.180e-1547.44S-adenosylmethionine tRNA ribosyltransferase n=1 T... [more]
K5BKN3_MYCHD2.860e-1548.72Uncharacterized protein n=2 Tax=Mycolicibacterium ... [more]
A0A1S8D322_9PROT7.570e-1551.35Uncharacterized protein n=2 Tax=Roseomonas TaxID=1... [more]
UPI001FF85A351.020e-1447.06DUF3253 domain-containing protein n=1 Tax=Roseomon... [more]
UPI0019EF5F071.650e-1348.75DUF3253 domain-containing protein n=1 Tax=filament... [more]
A0A5D0XNB7_9MICC2.070e-1350.00DUF3253 domain-containing protein n=1 Tax=Arthroba... [more]
A0A6I5QR36_9CYAN4.700e-1351.35DUF3253 domain-containing protein n=1 Tax=Leptolyn... [more]
UPI001BD9BAAD4.950e-1348.72DUF3253 domain-containing protein n=1 Tax=Williams... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 82..84
IPR021660Protein of unknown function DUF3253PFAMPF11625DUF3253coord: 4..82
e-value: 5.1E-24
score: 84.3
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 2..83
e-value: 5.9E-25
score: 89.1
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 3..82

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1136contigH-akashiwo_Contig1136:65215..65999 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1136.3.1mRNA_H-akashiwo_Contig1136.3.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig1136 65206..65999 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig1136.3.1 ID=prot_H-akashiwo_Contig1136.3.1|Name=mRNA_H-akashiwo_Contig1136.3.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=85bp
MLRETIRREILRLATARGFEKTLCPSEVARSVARQGEDWRALMEPVRCVG
RELVQEGFIIFMQRGQEIDAFGEVRGPIRFRLSL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021660DUF3253
IPR036388WH-like_DNA-bd_sf
IPR036390WH_DNA-bd_sf